AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054246

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054246.t1 MTR_6g044600 77.606 777 64 7 663 1361 183 927 0.0 1143
MS.gene054246.t1 MTR_6g044600 77.612 737 73 6 1 669 1 713 0.0 1118
MS.gene054246.t1 MTR_6g034375 49.149 529 173 11 860 1358 385 847 1.42e-128 419
MS.gene054246.t1 MTR_6g034375 45.238 336 110 9 827 1132 377 668 6.01e-56 211
MS.gene054246.t1 MTR_6g034375 45.704 291 104 9 403 669 392 652 1.41e-44 176
MS.gene054246.t1 MTR_6g034375 29.275 386 119 9 1 257 1 361 3.19e-38 155
MS.gene054246.t1 MTR_6g034375 49.149 529 173 11 860 1358 440 902 5.14e-128 419
MS.gene054246.t1 MTR_6g034375 44.643 336 112 9 827 1132 432 723 8.87e-56 211
MS.gene054246.t1 MTR_6g034375 45.704 291 104 9 403 669 447 707 2.05e-44 175
MS.gene054246.t1 MTR_6g034375 34.921 252 112 4 58 257 165 416 2.86e-32 137
MS.gene054246.t1 MTR_6g034375 29.934 304 160 7 1 298 1 257 4.84e-28 123
MS.gene054246.t1 MTR_6g044110 37.425 497 177 12 834 1328 328 692 8.57e-69 246
MS.gene054246.t1 MTR_6g044110 30.712 674 317 21 1 654 1 544 1.01e-52 198
MS.gene054246.t1 MTR_1g099270 39.776 357 160 10 1038 1348 12 359 3.63e-67 232
MS.gene054246.t1 MTR_2g006220 41.935 341 78 6 995 1290 72 337 1.07e-59 211
MS.gene054246.t1 MTR_2g006220 57.664 137 37 1 539 654 72 208 1.26e-34 138
MS.gene054246.t1 MTR_5g098320 43.015 272 93 6 1078 1348 5 215 2.63e-58 201
MS.gene054246.t1 MTR_1g099270 38.244 353 160 11 1038 1344 12 352 7.34e-58 204
MS.gene054246.t1 MTR_6g052260 55.280 161 66 4 1193 1352 7 162 3.44e-47 172
MS.gene054246.t1 MTR_3g095800 30.449 312 170 8 1075 1345 13 318 4.17e-37 143
MS.gene054246.t1 MTR_5g007180 34.595 185 115 3 1171 1349 737 921 2.71e-23 108
MS.gene054246.t1 MTR_5g007180 34.595 185 115 3 1171 1349 744 928 3.06e-23 108
MS.gene054246.t1 MTR_0001s0570 35.971 139 85 4 1214 1349 789 926 3.54e-21 101
MS.gene054246.t1 MTR_0001s0570 35.971 139 85 4 1214 1349 813 950 3.73e-21 101
MS.gene054246.t1 MTR_0001s0570 35.971 139 85 4 1214 1349 626 763 4.08e-21 101
MS.gene054246.t1 MTR_7g116160 31.111 135 81 3 1210 1333 25 158 5.75e-16 78.2
MS.gene054246.t1 MTR_1g070430 33.036 112 67 3 1235 1345 367 471 9.18e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054246.t1 AT1G43770 46.528 144 74 3 1208 1349 286 428 1.13e-32 133
MS.gene054246.t1 AT1G43770 38.636 88 43 2 1077 1163 8 85 1.59e-12 72.0
MS.gene054246.t1 AT1G43770 46.528 144 74 3 1208 1349 286 428 1.13e-32 133
MS.gene054246.t1 AT1G43770 38.636 88 43 2 1077 1163 8 85 1.59e-12 72.0
MS.gene054246.t1 AT5G16680 40.441 136 75 3 1214 1345 837 970 9.13e-26 116
MS.gene054246.t1 AT5G16680 40.441 136 75 3 1214 1345 837 970 9.13e-26 116
MS.gene054246.t1 AT3G02890 36.054 147 90 3 1201 1345 689 833 1.40e-23 108
MS.gene054246.t1 AT3G02890 36.054 147 90 3 1201 1345 630 774 6.08e-23 107
MS.gene054246.t1 AT3G02890 35.556 135 83 3 1201 1333 689 821 3.29e-18 91.3
MS.gene054246.t1 AT1G43770 42.353 85 47 2 1208 1291 286 369 5.47e-13 72.8
MS.gene054246.t1 AT1G43770 38.043 92 46 2 1077 1167 8 89 1.43e-12 71.6

Find 314 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAATTTCCGGAAACTTTC+TGG 0.060016 6.1:-26315606 None:intergenic
AACATTCTTGTGCTTTAAAA+TGG 0.145815 6.1:-26309987 None:intergenic
AACATTCTTGTGCTTTAAAA+TGG 0.145815 6.1:-26312090 None:intergenic
GTAGGTTCCAAATTGAAATT+TGG 0.193313 6.1:+26311906 MS.gene054246:CDS
GATTATTCGTTCCAAATTTC+CGG 0.199087 6.1:-26315617 None:intergenic
GAGATTACTGATTCAGAAAA+AGG 0.208458 6.1:+26315144 MS.gene054246:CDS
GAGATTACTGATTCAGAAAA+AGG 0.208458 6.1:+26315240 MS.gene054246:CDS
CCAGAAAGTTTCCGGAAATT+TGG 0.210995 6.1:+26315606 MS.gene054246:CDS
GGCTTCATTCCAGAAGAATT+TGG 0.224420 6.1:-26311780 None:intergenic
AGACTATTTCCAAATTCTTC+TGG 0.228796 6.1:+26309668 MS.gene054246:CDS
GGATTCATTCCAGAAGAATT+TGG 0.234605 6.1:-26309677 None:intergenic
TCCAAAGGATTGCAGTTTAA+AGG 0.236780 6.1:+26309940 MS.gene054246:CDS
CATCAATATCGGGAGGAATT+TGG 0.238978 6.1:-26308971 None:intergenic
AGAGTATTTCCAAATTCTTC+TGG 0.243371 6.1:+26311771 MS.gene054246:CDS
TGGTTCCAAGCGTGATATTA+TGG 0.252107 6.1:+26310063 MS.gene054246:CDS
CCCAAAGGATCGCGGTTTAA+AGG 0.257365 6.1:+26312043 MS.gene054246:CDS
CTCTTATCAGAATAGGGTTT+TGG 0.267805 6.1:-26309392 None:intergenic
CCCTTTAAACCGCGATCCTT+TGG 0.273500 6.1:-26312044 None:intergenic
CTTGTGATGTTCTTTGCCTT+TGG 0.275014 6.1:-26312420 None:intergenic
CTGTGTGGCCAGAAAGTTTC+CGG 0.287810 6.1:+26315598 MS.gene054246:CDS
CCTTTCAGGTATTGTTTAGA+TGG 0.290252 6.1:+26314997 MS.gene054246:intron
ATAATCCCCAAATTTCAATT+TGG 0.291866 6.1:-26311913 None:intergenic
TAGGTTCCAAATTGAAATTT+GGG 0.313943 6.1:+26311907 MS.gene054246:CDS
TTCTTATCAGCAAAGTCTTT+TGG 0.314124 6.1:-26309434 None:intergenic
TTAGATTCTGCGACTTTCAT+TGG 0.323885 6.1:-26309710 None:intergenic
GGTTAATAGGGGAAGTTTGC+TGG 0.326207 6.1:+26315443 MS.gene054246:intron
AGCAGTTGCACAACCTTTGC+TGG 0.327719 6.1:-26315274 None:intergenic
CTCCAGATTGGATCAGAAAT+AGG 0.331134 6.1:-26315318 None:intergenic
TTTGACTGCCGACGTTGTAC+TGG 0.333909 6.1:-26309503 None:intergenic
TTTGTCTCCTCGAGAACTTT+AGG 0.339521 6.1:-26315531 None:intergenic
TTGTTATCGGCATATTCTTC+CGG 0.340061 6.1:-26309350 None:intergenic
AAATACATGAAGATGGATAA+TGG 0.341748 6.1:+26310100 MS.gene054246:CDS
AAATACATGAAGATGGATAA+TGG 0.341748 6.1:+26312203 MS.gene054246:CDS
AATACATGAAGATGGATAAT+GGG 0.343174 6.1:+26310101 MS.gene054246:CDS
AATACATGAAGATGGATAAT+GGG 0.343174 6.1:+26312204 MS.gene054246:CDS
CATTCTGAGGAAAGAAATAA+AGG 0.350239 6.1:-26315650 None:intergenic
CCTTTAAACCGCGATCCTTT+GGG 0.350409 6.1:-26312043 None:intergenic
TTAGACTCTGCGACTTTCAT+AGG 0.353164 6.1:-26311813 None:intergenic
CCCTTTAAACTGCAATCCTT+TGG 0.353958 6.1:-26309941 None:intergenic
CCAGGATTAAAACAACCATT+AGG 0.360645 6.1:+26310199 MS.gene054246:CDS
GTAGATGCTAAATTGAAATC+TGG 0.366324 6.1:+26309803 MS.gene054246:CDS
TGAACCAGCATCATGTATCT+TGG 0.369166 6.1:-26316154 None:intergenic
TTATGCTGGTGCTAAGGATC+GGG 0.371127 6.1:+26311932 MS.gene054246:CDS
CTTCTATCAGCAAAGTCTTC+TGG 0.373088 6.1:-26309308 None:intergenic
CCAAAGGATTGCAGTTTAAA+GGG 0.378639 6.1:+26309941 MS.gene054246:CDS
TCAAAACTAGATCCTTCAAC+AGG 0.378708 6.1:-26312356 None:intergenic
CAGAATTCACAACTTCTGTT+TGG 0.383043 6.1:-26312538 None:intergenic
ACAGGTATTGGTGTCATTGT+AGG 0.383235 6.1:-26310235 None:intergenic
TACGATGCCTCACAAATGTT+TGG 0.383481 6.1:+26309553 MS.gene054246:CDS
GACTGAACCTGACTTATCAT+TGG 0.386392 6.1:-26310158 None:intergenic
ATGTCTGCTTCAAGCACATT+AGG 0.388418 6.1:-26315561 None:intergenic
CAAATTTCTTACCTCCAGAT+TGG 0.390376 6.1:-26315330 None:intergenic
AAAACAACCATTAGGGAGTC+TGG 0.391669 6.1:+26310207 MS.gene054246:CDS
CCAAAGGATCGCGGTTTAAA+GGG 0.394824 6.1:+26312044 MS.gene054246:CDS
AGCTCTCATGGCAAGGTCAT+TGG 0.395281 6.1:-26315937 None:intergenic
TGTTTGGAAGGACATAATAA+TGG 0.400355 6.1:+26311687 MS.gene054246:CDS
TGTTTGGAAGAACATAATAA+TGG 0.404021 6.1:+26309569 MS.gene054246:CDS
TGCTAAGGATCGGGGTTTCA+AGG 0.405459 6.1:+26311941 MS.gene054246:CDS
ACCTGACTTATCATTGGCCT+CGG 0.407215 6.1:-26310152 None:intergenic
CAAAATATTGTGGAAAAGAA+TGG 0.408938 6.1:+26310367 MS.gene054246:CDS
AGTCTACTATCTCGTCCATT+TGG 0.409427 6.1:-26309650 None:intergenic
CAATTGGTGAATGCCTCAAC+AGG 0.410343 6.1:+26310397 MS.gene054246:CDS
CACTTATCAGCAAAGTCTTC+CGG 0.410527 6.1:-26311555 None:intergenic
TAATCGAAATTCAAGTTCAA+TGG 0.416116 6.1:-26308948 None:intergenic
ACTCTACTATCTCGTCCATT+TGG 0.417856 6.1:-26311753 None:intergenic
ACCTTGAAACCACGATCCTT+TGG 0.418473 6.1:-26309839 None:intergenic
AAACTTGACGCTGATGCATC+TGG 0.418513 6.1:-26312590 None:intergenic
TTTGACTGCCGACTTTCTAC+TGG 0.419148 6.1:-26311621 None:intergenic
TGGTTCCAAGCGTGATGTTA+TGG 0.421135 6.1:+26312166 MS.gene054246:CDS
TAAGCGCCTCTTATCAGAAT+AGG 0.423349 6.1:-26309399 None:intergenic
AAGGTCTAAACGGAAACTTA+TGG 0.424588 6.1:+26310018 MS.gene054246:CDS
AAGGTCTAAACGGAAACTTA+TGG 0.424588 6.1:+26312121 MS.gene054246:CDS
CTCACTGTCTCGACATGTTT+CGG 0.424709 6.1:+26310300 MS.gene054246:CDS
AAGCGCCTCTTATCAGAATA+GGG 0.427203 6.1:-26309398 None:intergenic
ACATTCTTGTGCTTTAAAAT+GGG 0.428018 6.1:-26309986 None:intergenic
ACATTCTTGTGCTTTAAAAT+GGG 0.428018 6.1:-26312089 None:intergenic
TTCAATTTGGAACCTACAGC+TGG 0.428286 6.1:-26311900 None:intergenic
CAAAACCCTATTCTGATAAG+AGG 0.428741 6.1:+26309393 MS.gene054246:CDS
TTTAATCCTGGTCTTTGGAC+TGG 0.432062 6.1:-26310187 None:intergenic
TAGATGCTAAATTGAAATCT+GGG 0.432190 6.1:+26309804 MS.gene054246:CDS
ACTTTCATTGGTTGAACTAC+CGG 0.435046 6.1:-26309698 None:intergenic
CGATTGGTGAATGCCTCAAC+AGG 0.435178 6.1:+26312476 MS.gene054246:CDS
CTAGATCCTTCAACAGGTAT+TGG 0.436357 6.1:-26310247 None:intergenic
TTGACTGCCGACGTTGTACT+GGG 0.437538 6.1:-26309502 None:intergenic
CTCTTATCGACATCGCATTC+CGG 0.442602 6.1:-26309182 None:intergenic
TGAGGGCCAATCATCAATAT+CGG 0.445004 6.1:-26308982 None:intergenic
GTGTGGTAAGCACTTGTTAT+CGG 0.445501 6.1:-26309363 None:intergenic
AACCTATTTCTGATCCAATC+TGG 0.445687 6.1:+26315316 MS.gene054246:CDS
GAAAGTTCTACAAGGAAACT+TGG 0.448291 6.1:+26309905 MS.gene054246:CDS
ATTATGCTGGTGCTAAGGAT+CGG 0.448833 6.1:+26311931 MS.gene054246:CDS
GTGCTCACCGCCTCAAACGC+TGG 0.449757 6.1:+26311575 MS.gene054246:CDS
CAGGATTAAAACAACCATTA+GGG 0.452359 6.1:+26310200 MS.gene054246:CDS
CTTTCAGGTATTGTTTAGAT+GGG 0.452923 6.1:+26314998 MS.gene054246:intron
TTCCTCCCGATATTGATGAT+TGG 0.455261 6.1:+26308976 MS.gene054246:CDS
AAACAATTATAGAAGTGGTT+GGG 0.455945 6.1:+26308875 MS.gene054246:CDS
TCAATCAAAGTATTACTTGT+GGG 0.458599 6.1:+26316104 MS.gene054246:CDS
TAAGATGCATTGCAACTGTT+TGG 0.460970 6.1:+26311671 MS.gene054246:CDS
AAATCTCTAGTCCAAAGATC+TGG 0.461782 6.1:+26312284 MS.gene054246:CDS
TTTCTTGGGAGCATTGTAGA+AGG 0.462370 6.1:-26315990 None:intergenic
GGTTCCAAGCGTGATATTAT+GGG 0.462595 6.1:+26310064 MS.gene054246:CDS
TCAAAACTAGATCCTTCAAC+AGG 0.466842 6.1:-26310253 None:intergenic
AAAACAATTATAGAAGTGGT+TGG 0.466845 6.1:+26308874 MS.gene054246:CDS
AGTTGGCACGCTTCTGTAAG+AGG 0.466919 6.1:+26309141 MS.gene054246:CDS
TAGTGTCCCGGCATTTGATC+AGG 0.467004 6.1:-26309212 None:intergenic
AAAGAATGGTCAGCCACAAT+TGG 0.470120 6.1:+26310381 MS.gene054246:CDS
GATTGAGAACTTTCGTCTGC+AGG 0.473345 6.1:-26312716 None:intergenic
TGTCTTACATGTGGCGATGT+AGG 0.476362 6.1:+26310871 MS.gene054246:CDS
TGTCTTACATGTGGCGATGT+AGG 0.476362 6.1:+26312932 MS.gene054246:CDS
ACATTCTTCTGCTTTAAACT+AGG 0.477801 6.1:-26309875 None:intergenic
ATGACCTTGCCATGAGAGCT+AGG 0.478805 6.1:+26315940 MS.gene054246:CDS
GGTTCCAAGCGTGATGTTAT+GGG 0.478988 6.1:+26312167 MS.gene054246:CDS
AAAGTTCTACAAGGAAACTT+GGG 0.479172 6.1:+26309906 MS.gene054246:CDS
TGCTCACCGCCTCAAACGCT+GGG 0.480286 6.1:+26311576 MS.gene054246:CDS
ATTGCACCAATCCCTGTTGA+AGG 0.480917 6.1:+26312344 MS.gene054246:CDS
CAATCAGTTGGAATATCAAA+GGG 0.480975 6.1:+26309037 MS.gene054246:CDS
GAAAGTTCTACAAGGAAACT+TGG 0.481174 6.1:+26312008 MS.gene054246:CDS
AAATTCTTCTGGAATGAATC+CGG 0.483713 6.1:+26309679 MS.gene054246:CDS
TTCCGTTTAGACCTTTCAGC+TGG 0.484996 6.1:-26310010 None:intergenic
TTCCGTTTAGACCTTTCAGC+TGG 0.484996 6.1:-26312113 None:intergenic
TTCAATTTAGCATCTACAGC+TGG 0.485737 6.1:-26309797 None:intergenic
TATGTAGACCATGTTCAGTT+AGG 0.486944 6.1:-26310558 None:intergenic
TTTCAAAACAATTATAGAAG+TGG 0.487475 6.1:+26308870 MS.gene054246:CDS
TTGAAATTTGGGGATTATGC+TGG 0.487881 6.1:+26311918 MS.gene054246:CDS
CTTCATGTATTTATCTCCTA+CGG 0.488068 6.1:-26310089 None:intergenic
CTTCATGTATTTATCTCCTA+CGG 0.488068 6.1:-26312192 None:intergenic
GGAACGAATAATCTAAGCAT+TGG 0.489375 6.1:+26315627 MS.gene054246:CDS
TGCAGACGAAAGTTCTCAAT+CGG 0.490283 6.1:+26310657 MS.gene054246:CDS
AGCTTTGACAAAATCATCAC+TGG 0.492212 6.1:+26315477 MS.gene054246:CDS
CAGAAGACTTTGCTGATAGA+AGG 0.493947 6.1:+26309309 MS.gene054246:CDS
TTCCAGCTGAAAGGTCTAAA+CGG 0.495192 6.1:+26310008 MS.gene054246:CDS
TTCCAGCTGAAAGGTCTAAA+CGG 0.495192 6.1:+26312111 MS.gene054246:CDS
AAAGTTCTACAAGGAAACTT+GGG 0.495852 6.1:+26312009 MS.gene054246:CDS
AAACATGACGCTGATGCATC+TGG 0.496309 6.1:-26310529 None:intergenic
TGCAGACGAAAGTTCTCAAT+CGG 0.497315 6.1:+26312718 MS.gene054246:CDS
TTCTCAATCGGAAGTGGAGA+TGG 0.497579 6.1:+26310669 MS.gene054246:CDS
TTCTCAATCGGAAGTGGAGA+TGG 0.497579 6.1:+26312730 MS.gene054246:CDS
CTAGATCCTTCAACAGGGAT+TGG 0.498053 6.1:-26312350 None:intergenic
TATCTAGACCACGTTCAGAT+AGG 0.499680 6.1:-26312619 None:intergenic
CGAAAGTTCTCAATCGGAAG+TGG 0.499707 6.1:+26310663 MS.gene054246:CDS
CGAAAGTTCTCAATCGGAAG+TGG 0.499707 6.1:+26312724 MS.gene054246:CDS
AAATCATTTCATCAACTAGC+TGG 0.500573 6.1:-26315914 None:intergenic
CGGAATGCGATGTCGATAAG+AGG 0.503101 6.1:+26309183 MS.gene054246:CDS
TCATTTATGACTACTACATC+TGG 0.504057 6.1:-26315069 None:intergenic
TATGGATAACACTGGTGTAA+AGG 0.506963 6.1:+26310036 MS.gene054246:CDS
TTTATCAACCCTAGCTCTCA+TGG 0.507615 6.1:-26315949 None:intergenic
GCCATTCAATGATTTCAGTC+GGG 0.511986 6.1:+26308923 MS.gene054246:CDS
TGCCATTCAATGATTTCAGT+CGG 0.512496 6.1:+26308922 MS.gene054246:CDS
TCAAAAGTTTCAAAATATTG+TGG 0.513364 6.1:+26310357 MS.gene054246:CDS
CAGTTACCTGATCAAATGCC+GGG 0.514222 6.1:+26309206 MS.gene054246:CDS
CTCTTATCACTGTAGTGTCC+CGG 0.515447 6.1:-26309224 None:intergenic
AGGAGATAAATACATGAAGA+TGG 0.517228 6.1:+26310093 MS.gene054246:CDS
AGGAGATAAATACATGAAGA+TGG 0.517228 6.1:+26312196 MS.gene054246:CDS
ACAATCAGTTGGAATATCAA+AGG 0.519007 6.1:+26309036 MS.gene054246:CDS
GGCTCCCATAACATCACGCT+TGG 0.519042 6.1:-26312171 None:intergenic
CTTTCTACTGGAGCTATAGC+AGG 0.519573 6.1:-26311609 None:intergenic
CCCGAGGCCAATGATAAGTC+AGG 0.519576 6.1:+26310151 MS.gene054246:CDS
CCCGAGGTCAATGATAAGTC+AGG 0.519576 6.1:+26312254 MS.gene054246:CDS
TCACAAGTTTCAAAATATTG+TGG 0.520395 6.1:+26312436 MS.gene054246:CDS
AGAGACAACTAAGTTGCCTC+AGG 0.520643 6.1:+26312772 MS.gene054246:CDS
GTCACCGCTATGCTGATGAT+TGG 0.521149 6.1:+26309060 MS.gene054246:CDS
ACACATATGTATTAATATAC+CGG 0.521803 6.1:+26311536 MS.gene054246:CDS
ATGACACCAATACCTGTTGA+AGG 0.521864 6.1:+26310241 MS.gene054246:CDS
ATTTCTTTCCTCAGAATGAA+AGG 0.523461 6.1:+26315655 MS.gene054246:CDS
GGCTCCCATAATATCACGCT+TGG 0.524229 6.1:-26310068 None:intergenic
TGGGGATTATGCTGGTGCTA+AGG 0.525190 6.1:+26311926 MS.gene054246:CDS
AACACTGGTGCAAAGGATGA+TGG 0.525656 6.1:+26312146 MS.gene054246:CDS
AACGCAGGAATGGTTGGCCC+CGG 0.525828 6.1:-26309476 None:intergenic
TCCAAAGGATCGTGGTTTCA+AGG 0.526256 6.1:+26309838 MS.gene054246:CDS
ATTGGATCAGAAATAGGTTG+TGG 0.529705 6.1:-26315312 None:intergenic
GGTGAAGCCAGACTCCCTAA+TGG 0.530096 6.1:-26310214 None:intergenic
TGCTTACCGCATCAAACACC+GGG 0.532401 6.1:+26309458 MS.gene054246:CDS
GAGGGCCAATCATCAATATC+GGG 0.532784 6.1:-26308981 None:intergenic
CCTGACTTATCATTGGCCTC+GGG 0.533027 6.1:-26310151 None:intergenic
CTTTGCTGATGACAATCAGT+TGG 0.533358 6.1:+26309025 MS.gene054246:CDS
TCCCGACTGAAATCATTGAA+TGG 0.534975 6.1:-26308924 None:intergenic
GGAGCTATAGCAGGAATAGT+TGG 0.535109 6.1:-26311600 None:intergenic
CGGGACACTACAGTGATAAG+AGG 0.535944 6.1:+26309225 MS.gene054246:CDS
AACACTGGTGTAAAGGATGA+TGG 0.538242 6.1:+26310043 MS.gene054246:CDS
TTCAATCAAAGTATTACTTG+TGG 0.538588 6.1:+26316103 MS.gene054246:CDS
TCTAATATGACAGACACTGC+TGG 0.538995 6.1:+26310421 MS.gene054246:CDS
TCTAATATGACAGACACTGC+TGG 0.538995 6.1:+26312500 MS.gene054246:CDS
GTAAAGCTTGTGCACTGCAT+AGG 0.540182 6.1:+26310926 MS.gene054246:CDS
GTAAAGCTTGTGCACTGCAT+AGG 0.540182 6.1:+26312987 MS.gene054246:CDS
GTTGAGGCATTCACCAATTG+TGG 0.541328 6.1:-26310394 None:intergenic
ACGGAACGTAGTGTTCCAAA+TGG 0.541412 6.1:+26309635 MS.gene054246:CDS
ACGGAACGTAGTGTTCCAAA+TGG 0.541412 6.1:+26311738 MS.gene054246:CDS
AACTTTAGGACATGCTAAAG+TGG 0.542230 6.1:-26315517 None:intergenic
AAATTCTTCTGGAATGAAGC+CGG 0.545311 6.1:+26311782 MS.gene054246:CDS
GTCCTTGCCACATCAAAAGC+CGG 0.545736 6.1:+26309331 MS.gene054246:CDS
AAGGATCGGGGTTTCAAGGT+GGG 0.547674 6.1:+26311945 MS.gene054246:CDS
CCTGACTTATCATTGACCTC+GGG 0.550972 6.1:-26312254 None:intergenic
ATGCATTGCAACTGTTTGGA+AGG 0.552439 6.1:+26311675 MS.gene054246:CDS
AAACCTTTGGGCGTTTGATG+AGG 0.552739 6.1:-26309254 None:intergenic
TGCTGATGTGTGATGTGATG+AGG 0.552890 6.1:-26309000 None:intergenic
TGCTGATGTGTGATGTGATG+AGG 0.552890 6.1:-26309084 None:intergenic
AGAGACAACTAAGTTACCTC+AGG 0.554745 6.1:+26310711 MS.gene054246:CDS
AATACAGTCTCGACATGTCT+CGG 0.555190 6.1:+26310276 MS.gene054246:CDS
AATACAGTCTCGACATGTCT+CGG 0.555190 6.1:+26312379 MS.gene054246:CDS
GCAGTTACCTGATCAAATGC+CGG 0.558021 6.1:+26309205 MS.gene054246:CDS
AAGTCTTCTGGCGGTTGATG+TGG 0.559264 6.1:-26309296 None:intergenic
GCATTTACCACGTCAAAGGC+CGG 0.560961 6.1:+26309163 MS.gene054246:CDS
AAAGAATGATCAGCCACGAT+TGG 0.561083 6.1:+26312460 MS.gene054246:CDS
AAGGATCGTGGTTTCAAGGT+GGG 0.561251 6.1:+26309842 MS.gene054246:CDS
AAACCTCACCTTTCATTCTG+AGG 0.563475 6.1:-26315663 None:intergenic
TACTGGGGCTAACGCAGGAA+TGG 0.565506 6.1:-26309486 None:intergenic
GGTGAAGTCGATTCCAGCAA+AGG 0.566694 6.1:+26315261 MS.gene054246:CDS
TATGGATAACACTGGTGCAA+AGG 0.568680 6.1:+26312139 MS.gene054246:CDS
ACAAGAATGTTCCAGCTGAA+AGG 0.570140 6.1:+26309999 MS.gene054246:CDS
ACAAGAATGTTCCAGCTGAA+AGG 0.570140 6.1:+26312102 MS.gene054246:CDS
TCAAGTATCGGAAGCTGCAG+TGG 0.570258 6.1:+26310594 MS.gene054246:CDS
GTTTCAGTACTAACCTCTGA+AGG 0.573144 6.1:-26312689 None:intergenic
TGAAATTGAACCTCAAGTAT+CGG 0.574292 6.1:+26310582 MS.gene054246:CDS
ATAGTTGGTCCCAGCGTTTG+AGG 0.574724 6.1:-26311585 None:intergenic
CAATCAAAGTATTACTTGTG+GGG 0.575768 6.1:+26316105 MS.gene054246:CDS
GGGGCTAACGCAGGAATGGT+TGG 0.576643 6.1:-26309482 None:intergenic
TGTAGTTGAACCTCAAGTAT+CGG 0.578070 6.1:+26312643 MS.gene054246:CDS
CGTGATGTTATGGGAGCCGT+AGG 0.578899 6.1:+26312176 MS.gene054246:CDS
TTGCCTCATCAAACGCCCAA+AGG 0.579752 6.1:+26309251 MS.gene054246:CDS
ACGTTTAAAAGATCGAAAGT+TGG 0.581119 6.1:+26309124 MS.gene054246:CDS
ACTTCCTTGTTGCTGAATCG+AGG 0.581801 6.1:-26309773 None:intergenic
ACTTCCTTGTTGCTGAATCG+AGG 0.581801 6.1:-26311876 None:intergenic
ACTTTCATAGGTTGAACCAC+CGG 0.582521 6.1:-26311801 None:intergenic
ACTGCGGCTTCCGATACTTG+AGG 0.582721 6.1:-26312653 None:intergenic
GCTGATGTGTGATGTGATGA+GGG 0.583001 6.1:-26308999 None:intergenic
GCTGATGTGTGATGTGATGA+GGG 0.583001 6.1:-26309083 None:intergenic
TCGCCACATGTAAGACAGAC+AGG 0.584201 6.1:-26310865 None:intergenic
TCGCCACATGTAAGACAGAC+AGG 0.584201 6.1:-26312926 None:intergenic
AGAGGCATTTACCACGTCAA+AGG 0.584305 6.1:+26309159 MS.gene054246:CDS
TGGGGATAACACTGGTCCAA+AGG 0.584568 6.1:+26309823 MS.gene054246:CDS
ACTGCAGCTTCCGATACTTG+AGG 0.586372 6.1:-26310592 None:intergenic
GTTTCAGTACTAACCTCCGC+AGG 0.587845 6.1:-26310628 None:intergenic
CCAGCATCATGTATCTTGGA+TGG 0.588280 6.1:-26316150 None:intergenic
ACCTGACTTATCATTGACCT+CGG 0.590159 6.1:-26312255 None:intergenic
CCATCCAAGATACATGATGC+TGG 0.590774 6.1:+26316150 MS.gene054246:CDS
ATACATGAAGATGGATAATG+GGG 0.590780 6.1:+26310102 MS.gene054246:CDS
ATACATGAAGATGGATAATG+GGG 0.590780 6.1:+26312205 MS.gene054246:CDS
CAACCCTAGCTCTCATGGCA+AGG 0.592452 6.1:-26315944 None:intergenic
TGGGGATAACACTGGTCCAA+AGG 0.593249 6.1:+26309925 MS.gene054246:CDS
TCGAATGTTATTAAAATCAA+CGG 0.593725 6.1:+26311719 MS.gene054246:CDS
GTGCTTACCGCATCAAACAC+CGG 0.593728 6.1:+26309457 MS.gene054246:CDS
TGTAGGCTTTGAAGAGACAT+TGG 0.594230 6.1:+26310888 MS.gene054246:CDS
TGTAGGCTTTGAAGAGACAT+TGG 0.594230 6.1:+26312949 MS.gene054246:CDS
TTCTGACTGAAAGTTCTACA+AGG 0.596975 6.1:+26309897 MS.gene054246:CDS
TTCTGGCTGAAAGTTCTACA+AGG 0.597944 6.1:+26312000 MS.gene054246:CDS
CGGAAACTTATGGATAACAC+TGG 0.598529 6.1:+26310028 MS.gene054246:CDS
CGGAAACTTATGGATAACAC+TGG 0.598529 6.1:+26312131 MS.gene054246:CDS
CGTGATATTATGGGAGCCGT+AGG 0.599034 6.1:+26310073 MS.gene054246:CDS
TTGAAATCTGGGGATAACAC+TGG 0.599546 6.1:+26309815 MS.gene054246:CDS
AAAACAACCACCAGGGTGTG+TGG 0.604055 6.1:+26312310 MS.gene054246:CDS
AGCTCCTCGATTCAGCAACA+AGG 0.605895 6.1:+26309769 MS.gene054246:CDS
AGCTCCTCGATTCAGCAACA+AGG 0.605895 6.1:+26311872 MS.gene054246:CDS
TTTGAACTCCTAACTGAACA+TGG 0.606590 6.1:+26310550 MS.gene054246:CDS
GACATGCTAAAGTGGACAAG+TGG 0.607073 6.1:-26315509 None:intergenic
TGTTCTTCCAAACATTTGTG+AGG 0.607819 6.1:-26309560 None:intergenic
TGACCTTGCCATGAGAGCTA+GGG 0.609714 6.1:+26315941 MS.gene054246:CDS
AGCATGTCCTAAAGTTCTCG+AGG 0.609952 6.1:+26315524 MS.gene054246:CDS
GGAGATTGATGCTCCTTCAG+AGG 0.613112 6.1:+26312676 MS.gene054246:CDS
CAAAACTAGATCCTTCAACA+GGG 0.613617 6.1:-26312355 None:intergenic
CTATAGCTCCAGTAGAAAGT+CGG 0.614568 6.1:+26311613 MS.gene054246:CDS
TCAAGTATCGGAAGCCGCAG+TGG 0.617296 6.1:+26312655 MS.gene054246:CDS
TAAGGATCGGGGTTTCAAGG+TGG 0.618487 6.1:+26311944 MS.gene054246:CDS
TCGCATTCCGGCCTTTGACG+TGG 0.619276 6.1:-26309170 None:intergenic
AATGGCATATCATCATTGAA+CGG 0.621949 6.1:-26308906 None:intergenic
TATGCTGGTGCTAAGGATCG+GGG 0.622076 6.1:+26311933 MS.gene054246:CDS
AGGTTCCAAATTGAAATTTG+GGG 0.622685 6.1:+26311908 MS.gene054246:CDS
CGTTGTACTGGGGCTAACGC+AGG 0.623248 6.1:-26309491 None:intergenic
CTATCAGCAAAGTCTTCTGG+CGG 0.626204 6.1:-26309305 None:intergenic
AAATCTCCAGTCCAAAGACC+AGG 0.627329 6.1:+26310181 MS.gene054246:CDS
TTAGGTGAAGCCACACACCC+TGG 0.635273 6.1:-26312320 None:intergenic
GTTGAGGCATTCACCAATCG+TGG 0.637375 6.1:-26312473 None:intergenic
CAACTTAGTTGTCTCTGACA+CGG 0.640785 6.1:-26312765 None:intergenic
AGTGGAGATTGATGCTCCTG+CGG 0.644714 6.1:+26310612 MS.gene054246:CDS
AACAAGGAAGTTCCAGCTGT+AGG 0.646193 6.1:+26311888 MS.gene054246:CDS
AGGAAACTTGGGGATAACAC+TGG 0.648034 6.1:+26309917 MS.gene054246:CDS
TGGGGATAACACTAGCCCAA+AGG 0.649249 6.1:+26312028 MS.gene054246:CDS
AAGTTCTACAAGGAAACTTG+GGG 0.652845 6.1:+26309907 MS.gene054246:CDS
AAGTTCTACAAGGAAACTTG+GGG 0.652845 6.1:+26312010 MS.gene054246:CDS
GTTGGCCCCGGTGTTTGATG+CGG 0.653919 6.1:-26309464 None:intergenic
TTCTTCTGGAATGAAGCCGG+TGG 0.654020 6.1:+26311785 MS.gene054246:CDS
AGAACTACATGAGCAATCAA+CGG 0.655046 6.1:+26309616 MS.gene054246:CDS
AGATGCTAAATTGAAATCTG+GGG 0.656753 6.1:+26309805 MS.gene054246:CDS
GGAGATTGATGCTCCTGCGG+AGG 0.657246 6.1:+26310615 MS.gene054246:CDS
AAAGGATCGTGGTTTCAAGG+TGG 0.659142 6.1:+26309841 MS.gene054246:CDS
AACACTAGCCCAAAGGATCG+CGG 0.661143 6.1:+26312035 MS.gene054246:CDS
GTTGGTCCCAGCGTTTGAGG+CGG 0.661463 6.1:-26311582 None:intergenic
ATACCTGTCTGTCTTACATG+TGG 0.664257 6.1:+26310862 MS.gene054246:CDS
ATACCTGTCTGTCTTACATG+TGG 0.664257 6.1:+26312923 MS.gene054246:CDS
TCTGGTGGTGCAGATGCAAG+TGG 0.665708 6.1:-26310511 None:intergenic
AACACTGGTCCAAAGGATCG+TGG 0.665937 6.1:+26309830 MS.gene054246:CDS
CGTGAAATCATCAAAACCCG+AGG 0.666501 6.1:+26312238 MS.gene054246:CDS
GGCCAATCATCAATATCGGG+AGG 0.668041 6.1:-26308978 None:intergenic
CGTGAAATCATCAAAACCCG+AGG 0.668235 6.1:+26310135 MS.gene054246:CDS
TCTGGATTAAAACAACCACC+AGG 0.670269 6.1:+26312302 MS.gene054246:CDS
TTTGGACTCTTGAGACAGTG+AGG 0.676668 6.1:-26310323 None:intergenic
TTTGGACTCTTGAGACAGTG+AGG 0.676668 6.1:-26312402 None:intergenic
CTATTTCTGATCCAATCTGG+AGG 0.679126 6.1:+26315319 MS.gene054246:CDS
TGACTGCCGACGTTGTACTG+GGG 0.680787 6.1:-26309501 None:intergenic
TGTCATATTAGAGCCTGTTG+AGG 0.690200 6.1:-26310410 None:intergenic
TGTCATATTAGAGCCTGTTG+AGG 0.690200 6.1:-26312489 None:intergenic
CGAAACATGTCGAGACAGTG+AGG 0.690633 6.1:-26310299 None:intergenic
TAACTTAGTTGTCTCTGACA+CGG 0.700089 6.1:-26310704 None:intergenic
TTTGAACTCCTATCTGAACG+TGG 0.701119 6.1:+26312611 MS.gene054246:CDS
TCACTGTCTCAAGAGTCCAA+AGG 0.703127 6.1:+26310325 MS.gene054246:CDS
TCACTGTCTCAAGAGTCCAA+AGG 0.703127 6.1:+26312404 MS.gene054246:CDS
CGTTAGCCCCAGTACAACGT+CGG 0.703865 6.1:+26309495 MS.gene054246:CDS
GGTGAAGCCACACACCCTGG+TGG 0.721245 6.1:-26312317 None:intergenic
AATCAGTTGGAATATCAAAG+GGG 0.721881 6.1:+26309038 MS.gene054246:CDS
TGATTCAAAGAGAAGCTGTG+TGG 0.722721 6.1:+26315583 MS.gene054246:CDS
GTCGACAGATTTAGACGACG+AGG 0.726605 6.1:+26315200 MS.gene054246:CDS
CTGGATTAAAACAACCACCA+GGG 0.739081 6.1:+26312303 MS.gene054246:CDS
AGGGCCAATCATCAGCATAG+CGG 0.744214 6.1:-26309064 None:intergenic
CATGACGCTGATGCATCTGG+TGG 0.762659 6.1:-26310526 None:intergenic
AGGAGCATCAATCTCCACTG+CGG 0.767951 6.1:-26312669 None:intergenic
GCTTACCGCATCAAACACCG+GGG 0.813219 6.1:+26309459 MS.gene054246:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.1 gene 26308812 26316188 26308812 ID=MS.gene054246
chr6.1 mRNA 26308812 26316188 26308812 ID=MS.gene054246.t1;Parent=MS.gene054246
chr6.1 exon 26308812 26308814 26308812 ID=MS.gene054246.t1.exon1;Parent=MS.gene054246.t1
chr6.1 CDS 26308812 26308814 26308812 ID=cds.MS.gene054246.t1;Parent=MS.gene054246.t1
chr6.1 exon 26308861 26310732 26308861 ID=MS.gene054246.t1.exon2;Parent=MS.gene054246.t1
chr6.1 CDS 26308861 26310732 26308861 ID=cds.MS.gene054246.t1;Parent=MS.gene054246.t1
chr6.1 exon 26310862 26310947 26310862 ID=MS.gene054246.t1.exon3;Parent=MS.gene054246.t1
chr6.1 CDS 26310862 26310947 26310862 ID=cds.MS.gene054246.t1;Parent=MS.gene054246.t1
chr6.1 exon 26311530 26312793 26311530 ID=MS.gene054246.t1.exon4;Parent=MS.gene054246.t1
chr6.1 CDS 26311530 26312793 26311530 ID=cds.MS.gene054246.t1;Parent=MS.gene054246.t1
chr6.1 exon 26312923 26313008 26312923 ID=MS.gene054246.t1.exon5;Parent=MS.gene054246.t1
chr6.1 CDS 26312923 26313008 26312923 ID=cds.MS.gene054246.t1;Parent=MS.gene054246.t1
chr6.1 exon 26315005 26315340 26315005 ID=MS.gene054246.t1.exon6;Parent=MS.gene054246.t1
chr6.1 CDS 26315005 26315340 26315005 ID=cds.MS.gene054246.t1;Parent=MS.gene054246.t1
chr6.1 exon 26315452 26315676 26315452 ID=MS.gene054246.t1.exon7;Parent=MS.gene054246.t1
chr6.1 CDS 26315452 26315676 26315452 ID=cds.MS.gene054246.t1;Parent=MS.gene054246.t1
chr6.1 exon 26315896 26316020 26315896 ID=MS.gene054246.t1.exon8;Parent=MS.gene054246.t1
chr6.1 CDS 26315896 26316020 26315896 ID=cds.MS.gene054246.t1;Parent=MS.gene054246.t1
chr6.1 exon 26316100 26316188 26316100 ID=MS.gene054246.t1.exon9;Parent=MS.gene054246.t1
chr6.1 CDS 26316100 26316188 26316100 ID=cds.MS.gene054246.t1;Parent=MS.gene054246.t1
Gene Sequence

>MS.gene054246

ATGGTTTTATATCTAACATACTGCTTCATATTTGAATGCTTATTTGCAGATAGGAGATTTTCAAAACAATTATAGAAGTGGTTGGGATGTTATGCCGTTCAATGATGATATGCCATTCAATGATTTCAGTCGGGAACCATTGAACTTGAATTTCGATTACCAAATTCCTCCCGATATTGATGATTGGCCCTCATCACATCACACATCAGCACACTTTGCTGATGACAATCAGTTGGAATATCAAAGGGGTCACCGCTATGCTGATGATTGGCCCTCATCACATCACACATCAGCACACTATGCTGATAAGAAACGTTTAAAAGATCGAAAGTTGGCACGCTTCTGTAAGAGGCATTTACCACGTCAAAGGCCGGAATGCGATGTCGATAAGAGGCAGTTACCTGATCAAATGCCGGGACACTACAGTGATAAGAGGACTTTGCCTCATCAAACGCCCAAAGGTTTTGCTGGTAAAAGGAACTTACCACATCAACCGCCAGAAGACTTTGCTGATAGAAGGTCCTTGCCACATCAAAAGCCGGAAGAATATGCCGATAACAAGTGCTTACCACACCGAGCGCCAAAACCCTATTCTGATAAGAGGCGCTTACCACAACAAACACCAAAAGACTTTGCTGATAAGAAGTGCTTACCGCATCAAACACCGGGGCCAACCATTCCTGCGTTAGCCCCAGTACAACGTCGGCAGTCAAATATAGTACGCTGTAAAATTTGTAATGTTACGATGCCTCACAAATGTTTGGAAGAACATAATAATGGAAAGAAACATCGAATGAAATTAGAAGAACTACATGAGCAATCAACGGAACGTAGTGTTCCAAATGGACGAGATAGTAGACTATTTCCAAATTCTTCTGGAATGAATCCGGTAGTTCAACCAATGAAAGTCGCAGAATCTAAGAAAAATGAGCACCCTGTAGAAAATGTCTGTCGTGAAGCTCCTCGATTCAGCAACAAGGAAGTTCCAGCTGTAGATGCTAAATTGAAATCTGGGGATAACACTGGTCCAAAGGATCGTGGTTTCAAGGTGGGAAATGTGCGTCCTAGTTTAAAGCAGAAGAATGTTCTGACTGAAAGTTCTACAAGGAAACTTGGGGATAACACTGGTCCAAAGGATTGCAGTTTAAAGGGAGAAAATGTGAAAAATGAAGCTCCCATTTTAAAGCACAAGAATGTTCCAGCTGAAAGGTCTAAACGGAAACTTATGGATAACACTGGTGTAAAGGATGATGGTTCCAAGCGTGATATTATGGGAGCCGTAGGAGATAAATACATGAAGATGGATAATGGGGTAAGAAGACCCGTGAAATCATCAAAACCCGAGGCCAATGATAAGTCAGGTTCAGTCAAATCTCCAGTCCAAAGACCAGGATTAAAACAACCATTAGGGAGTCTGGCTTCACCTACAATGACACCAATACCTGTTGAAGGATCTAGTTTTGAAATACAGTCTCGACATGTCTCGGCCTCACTGTCTCGACATGTTTCGGCCTCACTGTCTCAAGAGTCCAAAGGCAAAGAACATCAAAAGTTTCAAAATATTGTGGAAAAGAATGGTCAGCCACAATTGGTGAATGCCTCAACAGGCTCTAATATGACAGACACTGCTGGTTTTATGACTAACAACCAAAAAGAAGTTGTGAATTCTGATTTTGCAGCGGTCAAAGTTGTTACAGAACCACTTGCATCTGCACCACCAGATGCATCAGCGTCATGTTTTGAACTCCTAACTGAACATGGTCTACATACTGAAATTGAACCTCAAGTATCGGAAGCTGCAGTGGAGATTGATGCTCCTGCGGAGGTTAGTACTGAAACTGAAGCTGCAGACGAAAGTTCTCAATCGGAAGTGGAGATGGATGTTCTCGTCACCGTGTCAGAGACAACTAAGTTACCTCAGGTTTTTCTCATTTTCTGACTTCCCTAGGAAGTTTCAAATAATACTGTTTTTTTCTTCTCGAAATCTGTGTTTTTTGAGCTATATACCTTTTATGAATCACTGAATTAAAACTATGCCTACTTGTTGCAGATACCTGTCTGTCTTACATGTGGCGATGTAGGCTTTGAAGAGACATTGGTGTCTTGCAACAAATGTAAAGCTTGTGCACTGCATAGGTACTTGTGACTTACTCTTTCCATGTACTATTTTGCATTGCATCTACTTGCAGCTTATTTTAATCATTGTACTTTGCAATCACTTCTGTTTCTATCCGGAAATGTGACTCCAAAGAATATTGAAACGATACACATTGCTTCGCATCATTACCCTGAACCTTTTTTGGACTAGCCACATCTTAATTTGTTCGAAAAAGCAGATATAAGATCTTATATATTGTTAAGATGGATGTTAAGTTATGGTTGGACTAGCCACATCTTAATTTGTTCGAAAAAGCAGATATAAGATCTTATATATTAGTTAAGATGGATGTTAAGTTATGGTTTTAGCAGGTTTTCATCATCACTAAATTAGCAGACGCATCTATTTTCTTTTTGCCATATGGACATGCTTTAAAATTTCTATTGGTTTTGAAGTAGAATTCTGAAGACATAAATATGGGCAATATGGATCTAAAACATGATTTAAATGCACGTGACTTGTTTTATATTGTAAGATATTGTTCGCCTGCATTTCCAATGTATCTACTCTATAGGAGAATATCATTGTGTGAATACCATTGTTCTCTTCTTCTGTTTTAGTGAACAACACATATGTATTAATATACCGGAAGACTTTGCTGATAAGTGCTCACCGCCTCAAACGCTGGGACCAACTATTCCTGCTATAGCTCCAGTAGAAAGTCGGCAGTCAAATATAATATGCTGTAAAATTTGTAATGTTAAGATGCATTGCAACTGTTTGGAAGGACATAATAATGGAAAGAAACATCGAATGTTATTAAAATCAACGGAACGTAGTGTTCCAAATGGACGAGATAGTAGAGTATTTCCAAATTCTTCTGGAATGAAGCCGGTGGTTCAACCTATGAAAGTCGCAGAGTCTAAGAAAAATGGGCACCCTGTAGAAAATGTGTGTCGTGAAGCTCCTCGATTCAGCAACAAGGAAGTTCCAGCTGTAGGTTCCAAATTGAAATTTGGGGATTATGCTGGTGCTAAGGATCGGGGTTTCAAGGTGGGAAAAATGCGTCCTAGTTTCAAGCAGAAAAATGTTCTGGCTGAAAGTTCTACAAGGAAACTTGGGGATAACACTAGCCCAAAGGATCGCGGTTTAAAGGGAGAAAATGTGAAAAATGAAGCTCCCATTTTAAAGCACAAGAATGTTCCAGCTGAAAGGTCTAAACGGAAACTTATGGATAACACTGGTGCAAAGGATGATGGTTCCAAGCGTGATGTTATGGGAGCCGTAGGAGATAAATACATGAAGATGGATAATGGGGTAAGAAGCCCCGTGAAATCATCAAAACCCGAGGTCAATGATAAGTCAGGTTCAGTCAAATCTCTAGTCCAAAGATCTGGATTAAAACAACCACCAGGGTGTGTGGCTTCACCTAAAATTGCACCAATCCCTGTTGAAGGATCTAGTTTTGAAATACAGTCTCGACATGTCTCGGCCTCACTGTCTCAAGAGTCCAAAGGCAAAGAACATCACAAGTTTCAAAATATTGTGGAAAAGAATGATCAGCCACGATTGGTGAATGCCTCAACAGGCTCTAATATGACAGACACTGCTGGTTCTATGACTAACAACCAAACAGAAGTTGTGAATTCTGATTATGCAGCAGTCAAAGTTGTTACAGAACCAGATGCATCAGCGTCAAGTTTTGAACTCCTATCTGAACGTGGTCTAGATACTGTAGTTGAACCTCAAGTATCGGAAGCCGCAGTGGAGATTGATGCTCCTTCAGAGGTTAGTACTGAAACTGAACCTGCAGACGAAAGTTCTCAATCGGAAGTGGAGATGGATGTTCTCGTCACCGTGTCAGAGACAACTAAGTTGCCTCAGGTTTTTCTCATTTTCTGACTTCCCTAGGAAGTTTCAAATAATATTGTTTTTTTCTTCTCGAAATCTGTGTTTTTTGAGCTATATACCTTTTATGAATCACTGAATTAAAACTTTGCCTACTTGTTGCAGATACCTGTCTGTCTTACATGTGGCGATGTAGGCTTTGAAGAGACATTGGTGTCTTGCAACAAATGTAAAGCTTGTGCACTGCATAGGTACTTATGACTTACTCTTTCCATTTACTATTTTGCATTGAATCTACTTGCAGCTAATTTTAATCGTTGTACTTTGCAACCACATCTGTTACTATCCGGATATGTGACTCCAAAGAATATTGAAACGATACACATTGCTTCGCATCGTTACCCTGATCCTTTTTTGGACTGGCTCCATCTTAATTTGTTAGAAAAAGCTGAAATAAGATCTAAAGCTTCTCACAGGCATTTGCTTTAAAGATGCTTGTTGGCCCCCTTTAAAGTTAGCTCTTTATGTCTGCTTTAAGCTTCGTCGGACATTTTATGGCCCATAGCTTACAACATCTTATGAGAAGGGCTTGTAGCTCGATACAGTTGTTGGCCAGCTGCGTACAGGCAGATGTATTCAGCCATTCCCATCCCTCATCAGGGCCCAGCTTGACTAAGAAAGATTTTTATGTGGATGAGAGGGGGAGAATCGTTTTTAGATATCCCCGCAATTAGAGCTATTAGATGGTAAGAGACTTCGCGCCATGGAACATGTCCAAGTCTACCACAAAATTCCAGTGCATTCCAGAATGCATCTATTTTTAATTAAGATCCATAATTTCTACTTTTGGTATCCTTATCATGTGCCGTAAGTAGGGCACATATTAGCATTATAAACTAACTTTCTCTCTTAAGAATAAAATTGTAAAAGTCTCTTAAAAAAAAATTGTAAAAACAATGGTAATAATTATAAACAAATTTAATACTACTATTAAATTTTTTAATTCATGTATTTGAAGAAAAATGTCATATATTTAAGGGCGAATGTAGTAATAAATTAACCAACTATTGAATTCAATAAGTAAAAGCACAATATATGATGATAATTCTTTCATTATTTAGACATAAACATATTTGAGTTGACTTATTCTTATTTATGGAAAATGTTAACATGTATCATATGTTAAGAAATCTAATGTGAAAATTTTGTCTTAAAAAATTATTCCAATTTATTTCTCAAAAAGTTTAAATTCATTTTTTTTAATAAAGACTTGTTATTTATGACATATGATTTTATGACATATGTTAGCATCACCATTAATTATATCTAACACAGTTCAATTTTTCAGATCCAGTTGGACAAACACGTATGAAATCTACACACGTATATACCTAGACAAAAAAAAGGGCAACCCGGTGCACTAAAGCTCCCGCATATGCAGGGTCCGGGAAGGGGTCCCACCATTTGGTGTATTGTACGCAGCCTTACCCTGTTTTACACAAGAGGCTGTTTCCAGGACTTGAACCCGTGACCTTTCAGTCACATGACAACAACTTTACCAGTTGCGCCAAGCCTTACCCTGTACGTATATACCTAGACAAATTAAGATCAAAATAAGAAACTTATTTACACGAGTTAAGATCCTCTCCATTTATGACCATCTCCGTTTCTTCTATTTGGAGAGATAAAGACACAAAAAAATCCAGAAAGAGTCAAAAATAATTAATGATGGTGGGACTCACTTGATGGTAGAACCCAATATCTATTTTGTGATTTAATTAAAAAAAAAAAACAGCTGCTTACCAATCCATCATCAAACCATTCTATTTGATAACCCATGCAAATTATAACTATGTTGTCAAGTAGCAGATGCATCTATTTTCTTTGCCATATGGACATGCTTTTAAATTTCTATTGGTTTAGAAGTAGAATTCTGAAGACATTAATAAGGGTAATATGGATCTAAAACATGATTTAAATGCACGTGACTATTGTTTTATATCGTAAGATATTGTTCTCCTGTGTTTCCAATGCATCTACTCTATAAGAGAATATAATTGTGTGAACACCATTGTTCTCTTCTTTTAATTTAGTGAACAACACATTTGTATTAATATACGATGAACTGCCATTGCTCCTGTGTTTTGCCATCATATTTTTCTTAACATGAAACTTTTGCATTTTATGGAGTTGGAAGCTTTTGCTATCGCAGTGTTTCACATTCTAAAATACCTTTTGGCCTTTCAGGTATTGTTTAGATGGGCCTGTCATTTTTACGGATGAGGTTATTTGGTTTTGTGAGGACTGCGAGCCAGATGTAGTAGTCATAAATGACTCTGATAGTGAGTCGACAGATTCAGACGACGAAACTACAGATTCAGATATTGAGATTACTGATTCAGAAAAAGGTGAAGTAGTAGTCATAAATGACTCTGATAGTGAGTCGACAGATTTAGACGACGAGGCTACAGATTCAGATATTGAGATTACTGATTCAGAAAAAGGTGAAGTCGATTCCAGCAAAGGTTGTGCAACTGCTGTTACTATTGCTGATCCACAACCTATTTCTGATCCAATCTGGAGGTAAGAAATTTGTTCTTTTTGTGACTTCTATTACATTATTTCGGAATTAATGTAACTTTTATAGCTGCTCCTGTGAAATCATTGTCTGAAGTTGAATTTTGTGGTTAATAGGGGAAGTTTGCTGGTTCTCAACAAAAGCTTTGACAAAATCATCACTGGATTATTGTGCCACTTGTCCACTTTAGCATGTCCTAAAGTTCTCGAGGAGACAAAACATCTACCTAATGTGCTTGAAGCAGACATGATTCAAAGAGAAGCTGTGTGGCCAGAAAGTTTCCGGAAATTTGGAACGAATAATCTAAGCATTGGCCTTTATTTCTTTCCTCAGAATGAAAGGTGAGGTTTTGCACAAACTTAATAACATGGTTGATTCGATAAACATTTTTGTTTTTTTATTATTTATTCTGTTCACTACTCATCCAAATATGGTTTTATGATTGAACATTATGGCGTAATTTGATCCATGTAGCGAACCCTGCTTATTGAGATAAGACTTTGTATAAGTTTTTTTTATAGATCTGATATGATCTCTCCATGTTAATGTCTTTTCGATAGGGATGAGAGATATTTTGACCAGCTAGTTGATGAAATGATTTCCAATGACCTTGCCATGAGAGCTAGGGTTGATAAAGCTGAGCTTTTAATATTTCCTTCTACAATGCTCCCAAGAAAATACAAGAGTGAGTTACATTACATTTACATATATGAGTTTTATTGCTTGTTAATTGTGTATAAGTTTTTGATTTAATCATTTTGCAGGGTTTCAATCAAAGTATTACTTGTGGGGAGTTTATAGAAGAAATCAAGTACCATCCAAGATACATGATGCTGGTTCAAGAAATGAATAG
Protein sequence

>MS.gene054246.t1

MIGDFQNNYRSGWDVMPFNDDMPFNDFSREPLNLNFDYQIPPDIDDWPSSHHTSAHFADDNQLEYQRGHRYADDWPSSHHTSAHYADKKRLKDRKLARFCKRHLPRQRPECDVDKRQLPDQMPGHYSDKRTLPHQTPKGFAGKRNLPHQPPEDFADRRSLPHQKPEEYADNKCLPHRAPKPYSDKRRLPQQTPKDFADKKCLPHQTPGPTIPALAPVQRRQSNIVRCKICNVTMPHKCLEEHNNGKKHRMKLEELHEQSTERSVPNGRDSRLFPNSSGMNPVVQPMKVAESKKNEHPVENVCREAPRFSNKEVPAVDAKLKSGDNTGPKDRGFKVGNVRPSLKQKNVLTESSTRKLGDNTGPKDCSLKGENVKNEAPILKHKNVPAERSKRKLMDNTGVKDDGSKRDIMGAVGDKYMKMDNGVRRPVKSSKPEANDKSGSVKSPVQRPGLKQPLGSLASPTMTPIPVEGSSFEIQSRHVSASLSRHVSASLSQESKGKEHQKFQNIVEKNGQPQLVNASTGSNMTDTAGFMTNNQKEVVNSDFAAVKVVTEPLASAPPDASASCFELLTEHGLHTEIEPQVSEAAVEIDAPAEVSTETEAADESSQSEVEMDVLVTVSETTKLPQIPVCLTCGDVGFEETLVSCNKCKACALHSEQHICINIPEDFADKCSPPQTLGPTIPAIAPVESRQSNIICCKICNVKMHCNCLEGHNNGKKHRMLLKSTERSVPNGRDSRVFPNSSGMKPVVQPMKVAESKKNGHPVENVCREAPRFSNKEVPAVGSKLKFGDYAGAKDRGFKVGKMRPSFKQKNVLAESSTRKLGDNTSPKDRGLKGENVKNEAPILKHKNVPAERSKRKLMDNTGAKDDGSKRDVMGAVGDKYMKMDNGVRSPVKSSKPEVNDKSGSVKSLVQRSGLKQPPGCVASPKIAPIPVEGSSFEIQSRHVSASLSQESKGKEHHKFQNIVEKNDQPRLVNASTGSNMTDTAGSMTNNQTEVVNSDYAAVKVVTEPDASASSFELLSERGLDTVVEPQVSEAAVEIDAPSEVSTETEPADESSQSEVEMDVLVTVSETTKLPQIPVCLTCGDVGFEETLVSCNKCKACALHRYCLDGPVIFTDEVIWFCEDCEPDVVVINDSDSESTDSDDETTDSDIEITDSEKGEVVVINDSDSESTDLDDEATDSDIEITDSEKGEVDSSKGCATAVTIADPQPISDPIWRGSLLVLNKSFDKIITGLLCHLSTLACPKVLEETKHLPNVLEADMIQREAVWPESFRKFGTNNLSIGLYFFPQNERDERYFDQLVDEMISNDLAMRARVDKAELLIFPSTMLPRKYKRFQSKYYLWGVYRRNQVPSKIHDAGSRNE