Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05440.t1 | XP_003620433.2 | 92.9 | 423 | 25 | 1 | 1 | 423 | 3 | 420 | 2.00E-232 | 814.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05440.t1 | Q65XS5 | 35.6 | 306 | 148 | 11 | 153 | 413 | 85 | 386 | 6.5e-38 | 159.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05440.t1 | G7KMN8 | 92.9 | 423 | 25 | 1 | 1 | 423 | 3 | 420 | 1.5e-232 | 814.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05440 | MS.gene80822 | 0.826501 | 2.62E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05440.t1 | MTR_6g083830 | 92.908 | 423 | 25 | 1 | 1 | 423 | 3 | 420 | 0.0 | 797 |
MS.gene05440.t1 | MTR_5g006920 | 77.412 | 425 | 91 | 5 | 1 | 423 | 1 | 422 | 0.0 | 664 |
MS.gene05440.t1 | MTR_5g006930 | 71.294 | 425 | 82 | 5 | 1 | 423 | 1 | 387 | 0.0 | 598 |
MS.gene05440.t1 | MTR_3g104840 | 68.941 | 425 | 97 | 7 | 1 | 423 | 3 | 394 | 0.0 | 575 |
MS.gene05440.t1 | MTR_5g055480 | 53.555 | 422 | 164 | 4 | 1 | 422 | 1 | 390 | 1.36e-166 | 473 |
MS.gene05440.t1 | MTR_1g110290 | 55.896 | 424 | 150 | 9 | 1 | 422 | 5 | 393 | 5.71e-164 | 467 |
MS.gene05440.t1 | MTR_1g016880 | 54.817 | 301 | 134 | 2 | 114 | 413 | 67 | 366 | 9.03e-126 | 369 |
MS.gene05440.t1 | MTR_2g005350 | 53.074 | 309 | 143 | 2 | 115 | 422 | 131 | 438 | 3.55e-118 | 352 |
MS.gene05440.t1 | MTR_8g015500 | 53.571 | 308 | 140 | 3 | 115 | 420 | 105 | 411 | 1.57e-112 | 336 |
MS.gene05440.t1 | MTR_3g108740 | 41.290 | 310 | 155 | 5 | 127 | 413 | 66 | 371 | 8.56e-70 | 225 |
MS.gene05440.t1 | MTR_1g009960 | 43.206 | 287 | 137 | 4 | 151 | 415 | 110 | 392 | 1.42e-69 | 225 |
MS.gene05440.t1 | MTR_4g127550 | 38.924 | 316 | 167 | 5 | 122 | 415 | 76 | 387 | 1.44e-66 | 218 |
MS.gene05440.t1 | MTR_2g037600 | 40.063 | 317 | 163 | 7 | 122 | 415 | 74 | 386 | 2.23e-64 | 212 |
MS.gene05440.t1 | MTR_1g009960 | 45.868 | 242 | 122 | 2 | 151 | 386 | 110 | 348 | 5.74e-64 | 210 |
MS.gene05440.t1 | MTR_2g037620 | 39.721 | 287 | 148 | 4 | 150 | 415 | 95 | 377 | 1.68e-62 | 206 |
MS.gene05440.t1 | MTR_2g024120 | 37.500 | 336 | 157 | 13 | 121 | 413 | 34 | 359 | 4.61e-52 | 179 |
MS.gene05440.t1 | MTR_8g094180 | 37.380 | 313 | 141 | 11 | 150 | 413 | 53 | 359 | 1.94e-50 | 174 |
MS.gene05440.t1 | MTR_8g094180 | 37.638 | 271 | 130 | 9 | 150 | 387 | 53 | 317 | 2.28e-47 | 165 |
MS.gene05440.t1 | MTR_3g106930 | 36.749 | 283 | 153 | 9 | 153 | 416 | 95 | 370 | 1.06e-38 | 143 |
MS.gene05440.t1 | MTR_1g031060 | 35.202 | 321 | 168 | 10 | 122 | 416 | 49 | 355 | 1.44e-35 | 134 |
MS.gene05440.t1 | MTR_2g087610 | 32.886 | 298 | 160 | 9 | 153 | 420 | 78 | 365 | 9.29e-35 | 132 |
MS.gene05440.t1 | MTR_1g048320 | 36.842 | 285 | 149 | 10 | 152 | 416 | 64 | 337 | 4.25e-34 | 130 |
MS.gene05440.t1 | MTR_1g031080 | 30.855 | 269 | 151 | 8 | 174 | 420 | 34 | 289 | 1.96e-26 | 108 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05440.t1 | AT1G68390 | 60.703 | 313 | 119 | 3 | 113 | 422 | 97 | 408 | 3.50e-141 | 409 |
MS.gene05440.t1 | AT5G11730 | 55.627 | 311 | 136 | 2 | 113 | 422 | 77 | 386 | 2.41e-127 | 373 |
MS.gene05440.t1 | AT1G51770 | 55.763 | 321 | 137 | 3 | 104 | 423 | 77 | 393 | 4.75e-125 | 368 |
MS.gene05440.t1 | AT3G21310 | 55.663 | 309 | 135 | 2 | 115 | 422 | 76 | 383 | 1.06e-124 | 366 |
MS.gene05440.t1 | AT3G21310 | 55.663 | 309 | 135 | 2 | 115 | 422 | 76 | 383 | 1.06e-124 | 366 |
MS.gene05440.t1 | AT5G25970 | 52.188 | 320 | 149 | 3 | 102 | 420 | 69 | 385 | 8.78e-120 | 354 |
MS.gene05440.t1 | AT5G25970 | 52.188 | 320 | 149 | 3 | 102 | 420 | 69 | 385 | 8.78e-120 | 354 |
MS.gene05440.t1 | AT5G25970 | 52.188 | 320 | 149 | 3 | 102 | 420 | 69 | 385 | 8.78e-120 | 354 |
MS.gene05440.t1 | AT1G68380 | 56.604 | 318 | 124 | 8 | 112 | 422 | 82 | 392 | 1.09e-118 | 351 |
MS.gene05440.t1 | AT1G10280 | 44.584 | 397 | 211 | 5 | 29 | 422 | 22 | 412 | 1.67e-118 | 352 |
MS.gene05440.t1 | AT1G10880 | 55.593 | 295 | 125 | 3 | 127 | 419 | 93 | 383 | 1.53e-117 | 348 |
MS.gene05440.t1 | AT1G73810 | 47.406 | 424 | 201 | 9 | 2 | 422 | 14 | 418 | 2.57e-117 | 349 |
MS.gene05440.t1 | AT5G16170 | 49.853 | 341 | 151 | 4 | 102 | 423 | 71 | 410 | 2.59e-115 | 343 |
MS.gene05440.t1 | AT1G51770 | 50.156 | 321 | 128 | 4 | 104 | 423 | 77 | 366 | 5.94e-107 | 321 |
MS.gene05440.t1 | AT4G31350 | 38.580 | 324 | 171 | 6 | 116 | 417 | 53 | 370 | 2.65e-68 | 221 |
MS.gene05440.t1 | AT4G31350 | 38.580 | 324 | 171 | 6 | 116 | 417 | 53 | 370 | 2.65e-68 | 221 |
MS.gene05440.t1 | AT4G31350 | 38.580 | 324 | 171 | 6 | 116 | 417 | 53 | 370 | 2.65e-68 | 221 |
MS.gene05440.t1 | AT4G30060 | 39.329 | 328 | 171 | 6 | 110 | 413 | 64 | 387 | 1.44e-67 | 220 |
MS.gene05440.t1 | AT4G30060 | 39.329 | 328 | 171 | 6 | 110 | 413 | 64 | 387 | 1.44e-67 | 220 |
MS.gene05440.t1 | AT2G19160 | 37.427 | 342 | 185 | 7 | 99 | 417 | 53 | 388 | 5.54e-67 | 219 |
MS.gene05440.t1 | AT2G19160 | 37.427 | 342 | 185 | 7 | 99 | 417 | 53 | 388 | 5.54e-67 | 219 |
MS.gene05440.t1 | AT4G25870 | 38.279 | 337 | 178 | 7 | 107 | 417 | 50 | 382 | 2.50e-66 | 217 |
MS.gene05440.t1 | AT5G57270 | 38.028 | 355 | 178 | 8 | 91 | 417 | 41 | 381 | 4.94e-64 | 211 |
MS.gene05440.t1 | AT5G57270 | 38.028 | 355 | 178 | 8 | 91 | 417 | 41 | 381 | 4.94e-64 | 211 |
MS.gene05440.t1 | AT5G57270 | 38.028 | 355 | 178 | 8 | 91 | 417 | 41 | 381 | 4.94e-64 | 211 |
MS.gene05440.t1 | AT5G57270 | 38.028 | 355 | 178 | 8 | 91 | 417 | 41 | 381 | 4.94e-64 | 211 |
MS.gene05440.t1 | AT5G57270 | 38.028 | 355 | 178 | 8 | 91 | 417 | 41 | 381 | 4.94e-64 | 211 |
MS.gene05440.t1 | AT3G21310 | 57.955 | 176 | 72 | 2 | 115 | 289 | 76 | 250 | 1.33e-63 | 206 |
MS.gene05440.t1 | AT4G31350 | 37.654 | 324 | 169 | 7 | 116 | 417 | 53 | 365 | 1.72e-63 | 209 |
MS.gene05440.t1 | AT5G14550 | 36.449 | 321 | 156 | 10 | 137 | 414 | 49 | 364 | 7.65e-52 | 178 |
MS.gene05440.t1 | AT5G14550 | 36.449 | 321 | 156 | 10 | 137 | 414 | 49 | 364 | 7.97e-52 | 178 |
MS.gene05440.t1 | AT5G14550 | 36.897 | 290 | 152 | 9 | 137 | 407 | 49 | 326 | 7.68e-51 | 175 |
MS.gene05440.t1 | AT1G11940 | 39.604 | 303 | 137 | 12 | 152 | 413 | 73 | 370 | 1.38e-50 | 175 |
MS.gene05440.t1 | AT1G62305 | 38.689 | 305 | 136 | 11 | 152 | 413 | 68 | 364 | 8.54e-50 | 173 |
MS.gene05440.t1 | AT3G52060 | 33.758 | 314 | 175 | 9 | 127 | 420 | 43 | 343 | 1.68e-46 | 164 |
MS.gene05440.t1 | AT1G62305 | 44.186 | 215 | 89 | 7 | 152 | 342 | 68 | 275 | 7.26e-45 | 158 |
MS.gene05440.t1 | AT5G14550 | 35.621 | 306 | 152 | 10 | 137 | 414 | 49 | 337 | 2.10e-44 | 158 |
MS.gene05440.t1 | AT1G11940 | 47.120 | 191 | 91 | 6 | 152 | 336 | 73 | 259 | 2.44e-44 | 155 |
MS.gene05440.t1 | AT5G25330 | 37.729 | 273 | 157 | 9 | 153 | 413 | 81 | 352 | 1.99e-41 | 150 |
MS.gene05440.t1 | AT1G62305 | 35.082 | 305 | 123 | 11 | 152 | 413 | 68 | 340 | 3.98e-36 | 136 |
MS.gene05440.t1 | AT5G22070 | 33.223 | 301 | 156 | 11 | 153 | 420 | 71 | 359 | 4.26e-36 | 136 |
MS.gene05440.t1 | AT4G32290 | 36.458 | 288 | 151 | 10 | 153 | 416 | 93 | 372 | 3.14e-33 | 129 |
Find 80 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGGTCATATTCTAGTATT+TGG | 0.154619 | 6.1:+73517787 | MS.gene05440:CDS |
CATTGGTTAGTATCAAATTT+TGG | 0.206958 | 6.1:+73520786 | MS.gene05440:CDS |
TGAATGAAGAGGAATTATTT+TGG | 0.223524 | 6.1:+73518085 | MS.gene05440:CDS |
TAGGAGGTGAATGAGAAATA+TGG | 0.274039 | 6.1:-73517918 | None:intergenic |
TTGATCCTTATTATTCTTCA+TGG | 0.276580 | 6.1:-73517701 | None:intergenic |
AATGGAGGTTTATGAATCAT+AGG | 0.338946 | 6.1:-73518123 | None:intergenic |
GATCAAAGCTCAGTCTTTCA+TGG | 0.339226 | 6.1:+73518291 | MS.gene05440:CDS |
GAACATTGACTTGGGTTGAT+TGG | 0.348822 | 6.1:+73520825 | MS.gene05440:CDS |
GTTTCATTGAAAGAAGGATT+TGG | 0.351327 | 6.1:-73518261 | None:intergenic |
TTCTATCAATGCGAAGAGTT+TGG | 0.354998 | 6.1:+73517990 | MS.gene05440:CDS |
CCTTGCACTTCATATAGTTT+CGG | 0.361049 | 6.1:+73520691 | MS.gene05440:CDS |
CAATTGAATTGCATCAACTT+TGG | 0.365763 | 6.1:-73521022 | None:intergenic |
CTATATTTCTTCAATTTCCT+TGG | 0.377478 | 6.1:+73517769 | MS.gene05440:CDS |
GAAATTCACTCCTCATGCTT+TGG | 0.379354 | 6.1:+73520979 | MS.gene05440:CDS |
ACCTTTGGTATTTGTTTGAA+TGG | 0.383101 | 6.1:-73518141 | None:intergenic |
AAACTTTCACAATGGAGAAA+AGG | 0.402768 | 6.1:+73520641 | MS.gene05440:CDS |
TTTGAGATGTTTGATGAGAT+AGG | 0.403256 | 6.1:-73517937 | None:intergenic |
CATGACCATGAAGAATAATA+AGG | 0.403918 | 6.1:+73517696 | None:intergenic |
CACGTCCAACAGCACCTTCT+AGG | 0.409769 | 6.1:-73520586 | None:intergenic |
AGGAGGTGAATGAGAAATAT+GGG | 0.416673 | 6.1:-73517917 | None:intergenic |
AAATCCTTCTTTCAATGAAA+CGG | 0.423121 | 6.1:+73518263 | MS.gene05440:CDS |
AAGATGGATCTTGAAATTGT+TGG | 0.437950 | 6.1:-73517876 | None:intergenic |
GTTTGGTTATGATCATTTGA+TGG | 0.438727 | 6.1:-73517961 | None:intergenic |
TTTGAAAACGTACCCTGCTT+GGG | 0.440429 | 6.1:-73518323 | None:intergenic |
TCTGTTCTAATAAACTTAGA+TGG | 0.446370 | 6.1:-73520866 | None:intergenic |
CATTGTGAAAGTTTAATCAA+TGG | 0.449321 | 6.1:-73520632 | None:intergenic |
AACTTTCACAATGGAGAAAA+GGG | 0.449970 | 6.1:+73520642 | MS.gene05440:CDS |
CATATTCTAGTATTTGGTGT+TGG | 0.452879 | 6.1:+73517793 | MS.gene05440:CDS |
CACAAAGGAGCCAATAAAAC+AGG | 0.454789 | 6.1:-73518189 | None:intergenic |
AAATTCTTCAAGGGAAATGA+AGG | 0.457736 | 6.1:+73518216 | MS.gene05440:CDS |
AAACGTTACTTCAAATGGGT+TGG | 0.469287 | 6.1:+73518026 | MS.gene05440:CDS |
GTGGAAGCCTATGACCTAGA+AGG | 0.471632 | 6.1:+73520572 | MS.gene05440:CDS |
TTTGTGGGAGAAATTCTTCA+AGG | 0.473388 | 6.1:+73518206 | MS.gene05440:CDS |
TCTAATAAACTTAGATGGAT+GGG | 0.475416 | 6.1:-73520861 | None:intergenic |
TTCTAATAAACTTAGATGGA+TGG | 0.475606 | 6.1:-73520862 | None:intergenic |
TAAACCGTTTCATTGAAAGA+AGG | 0.478318 | 6.1:-73518267 | None:intergenic |
TTTGGTGTTGGATTACTCAT+TGG | 0.479713 | 6.1:+73517805 | MS.gene05440:CDS |
ATGTTTGTCATTTGTTTGCA+AGG | 0.481551 | 6.1:+73520957 | MS.gene05440:CDS |
TTCATATCATGCATAGCCAT+TGG | 0.488959 | 6.1:-73518066 | None:intergenic |
CGTTACTTCAAATGGGTTGG+AGG | 0.491283 | 6.1:+73518029 | MS.gene05440:CDS |
GTACCCTGCTTGGGATTCTT+CGG | 0.491890 | 6.1:-73518314 | None:intergenic |
ACTTGGGTTGATTGGTCAAA+AGG | 0.503911 | 6.1:+73520833 | MS.gene05440:CDS |
GAATGAGAAATATGGGAAGA+TGG | 0.508003 | 6.1:-73517910 | None:intergenic |
GATGGATTGAAGCTAAAAGA+TGG | 0.509647 | 6.1:-73517892 | None:intergenic |
GGGTGAGAATAGCATGATAG+AGG | 0.521578 | 6.1:+73520415 | MS.gene05440:CDS |
ATTCTAATAGAACATTGACT+TGG | 0.531190 | 6.1:+73520816 | MS.gene05440:CDS |
TTCTAATAGAACATTGACTT+GGG | 0.531862 | 6.1:+73520817 | MS.gene05440:CDS |
GGTTATGCAGGAGGTAAAGT+GGG | 0.532361 | 6.1:+73520394 | MS.gene05440:intron |
AATTTGATACTAACCAATGT+TGG | 0.537920 | 6.1:-73520782 | None:intergenic |
TTGTGGGAGAAATTCTTCAA+GGG | 0.539722 | 6.1:+73518207 | MS.gene05440:CDS |
TGGTTATGCAGGAGGTAAAG+TGG | 0.549345 | 6.1:+73520393 | MS.gene05440:intron |
TTTGGTATTTGTTTGAATGG+AGG | 0.551869 | 6.1:-73518138 | None:intergenic |
CCGAAACTATATGAAGTGCA+AGG | 0.557028 | 6.1:-73520691 | None:intergenic |
GTTCATCACTATAGCATGGA+GGG | 0.561291 | 6.1:-73520751 | None:intergenic |
AACAGCACCTTCTAGGTCAT+AGG | 0.563636 | 6.1:-73520579 | None:intergenic |
CTAGAAGGTGCTGTTGGACG+TGG | 0.566483 | 6.1:+73520587 | MS.gene05440:CDS |
TATGACCTAGAAGGTGCTGT+TGG | 0.569260 | 6.1:+73520581 | MS.gene05440:CDS |
CGAAACTATATGAAGTGCAA+GGG | 0.572705 | 6.1:-73520690 | None:intergenic |
TGAACACTACTTGCCAACAT+TGG | 0.579083 | 6.1:+73520769 | MS.gene05440:CDS |
CTAATAAACTTAGATGGATG+GGG | 0.583139 | 6.1:-73520860 | None:intergenic |
ATGGCCGAAGAATCCCAAGC+AGG | 0.584566 | 6.1:+73518310 | MS.gene05440:CDS |
GGAAGCACTTGTAAGTACAA+TGG | 0.600388 | 6.1:+73520923 | MS.gene05440:CDS |
TAGTGTTCATCACTATAGCA+TGG | 0.604986 | 6.1:-73520755 | None:intergenic |
TGGGTTGATTGGTCAAAAGG+TGG | 0.610218 | 6.1:+73520836 | MS.gene05440:CDS |
TCCATTCAAACAAATACCAA+AGG | 0.610256 | 6.1:+73518140 | MS.gene05440:CDS |
GTTATGCAGGAGGTAAAGTG+GGG | 0.612286 | 6.1:+73520395 | MS.gene05440:intron |
CTGAAAGTAGTACAAAACGT+TGG | 0.615883 | 6.1:-73520481 | None:intergenic |
TGGCCGAAGAATCCCAAGCA+GGG | 0.623038 | 6.1:+73518311 | MS.gene05440:CDS |
ATTGTAGAGAAATTGAACAA+TGG | 0.626994 | 6.1:-73520515 | None:intergenic |
AATTCTTCAAGGGAAATGAA+GGG | 0.631395 | 6.1:+73518217 | MS.gene05440:CDS |
TTGAAGAATTTCTCCCACAA+AGG | 0.632282 | 6.1:-73518204 | None:intergenic |
CATTGATTAAACTTTCACAA+TGG | 0.634391 | 6.1:+73520633 | MS.gene05440:CDS |
AATGGAGAAAAGGGTCACAA+TGG | 0.647572 | 6.1:+73520651 | MS.gene05440:CDS |
TATGCATGATATGAATGAAG+AGG | 0.657412 | 6.1:+73518074 | MS.gene05440:CDS |
AGCAATCTATCCAAAGCATG+AGG | 0.658038 | 6.1:-73520989 | None:intergenic |
GAGATGTTTGATGAGATAGG+AGG | 0.661731 | 6.1:-73517934 | None:intergenic |
TAGGTCATAGGCTTCCACAA+AGG | 0.665797 | 6.1:-73520567 | None:intergenic |
TGTTCATCACTATAGCATGG+AGG | 0.690558 | 6.1:-73520752 | None:intergenic |
AAGAATAATAAGGATCAACA+AGG | 0.691284 | 6.1:+73517706 | MS.gene05440:CDS |
CAAATACTAGAATATGACCA+AGG | 0.698641 | 6.1:-73517786 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTAATAAATTAATAAAA+TGG | + | chr6.1:73518717-73518736 | MS.gene05440:intron | 0.0% |
!!! | ATTTTCTTTTGAATATTTAT+AGG | + | chr6.1:73520325-73520344 | MS.gene05440:intron | 10.0% |
!! | AAAAAAAAAAAGTAAAGAAG+TGG | - | chr6.1:73518572-73518591 | None:intergenic | 15.0% |
!! | ACTAAAACAAAACAAAAAAT+AGG | - | chr6.1:73520015-73520034 | None:intergenic | 15.0% |
!! | ATTTCAATACGAAATAAATT+AGG | - | chr6.1:73520100-73520119 | None:intergenic | 15.0% |
!! | TTTCAATACGAAATAAATTA+GGG | - | chr6.1:73520099-73520118 | None:intergenic | 15.0% |
!!! | ATTGGTCTTTTATATTTTTT+GGG | + | chr6.1:73519395-73519414 | MS.gene05440:intron | 15.0% |
!!! | ATTTGAAAACTTGTTATTAT+TGG | - | chr6.1:73519188-73519207 | None:intergenic | 15.0% |
!!! | CACTTTTTCTATTTATTTTT+CGG | + | chr6.1:73518617-73518636 | MS.gene05440:intron | 15.0% |
!!! | TGCATTTTAAAGTTTTTAAA+TGG | - | chr6.1:73518696-73518715 | None:intergenic | 15.0% |
!!! | TTTTTGGGAAAAAATATTTT+TGG | + | chr6.1:73519410-73519429 | MS.gene05440:intron | 15.0% |
!! | AAATATCAAGAATCAAAAGT+AGG | - | chr6.1:73520066-73520085 | None:intergenic | 20.0% |
!! | AGAATTGTGAAAAAATTGAT+AGG | - | chr6.1:73519607-73519626 | None:intergenic | 20.0% |
!! | ATAAAAACGTTACTTCAAAT+GGG | + | chr6.1:73518022-73518041 | MS.gene05440:CDS | 20.0% |
!! | CTTGAAAAAACAAAACATAT+TGG | - | chr6.1:73518655-73518674 | None:intergenic | 20.0% |
!! | TCAAATACAAAAATCTACAT+TGG | + | chr6.1:73519792-73519811 | MS.gene05440:intron | 20.0% |
!! | TGAAGTTGAATATTAACTAT+AGG | + | chr6.1:73519334-73519353 | MS.gene05440:intron | 20.0% |
!!! | ACATTACATTATGAATTTTG+TGG | + | chr6.1:73519363-73519382 | MS.gene05440:intron | 20.0% |
!!! | ATATTTTTGGTTAAACTTCA+TGG | + | chr6.1:73519423-73519442 | MS.gene05440:intron | 20.0% |
!!! | CAATATGTTTTGTTTTTTCA+AGG | + | chr6.1:73518653-73518672 | MS.gene05440:intron | 20.0% |
!!! | CATTGATAGAAATTTTTGTT+TGG | - | chr6.1:73517981-73518000 | None:intergenic | 20.0% |
!!! | CATTGGTCTTTTATATTTTT+TGG | + | chr6.1:73519394-73519413 | MS.gene05440:intron | 20.0% |
!!! | CCAAAATAAATGATTTTCTT+TGG | + | chr6.1:73520373-73520392 | MS.gene05440:intron | 20.0% |
!!! | CCAAAGAAAATCATTTATTT+TGG | - | chr6.1:73520376-73520395 | None:intergenic | 20.0% |
!!! | GATACATTTTATTTTGTCTT+TGG | - | chr6.1:73519671-73519690 | None:intergenic | 20.0% |
!!! | TCCTTTTCATTTGATTATAA+GGG | + | chr6.1:73518876-73518895 | MS.gene05440:intron | 20.0% |
!!! | TTCCTTTTCATTTGATTATA+AGG | + | chr6.1:73518875-73518894 | MS.gene05440:intron | 20.0% |
! | AAAAACATAAATGCAACCTT+TGG | - | chr6.1:73518159-73518178 | None:intergenic | 25.0% |
! | AAAAGGTTAGACGTAAATTA+TGG | - | chr6.1:73518513-73518532 | None:intergenic | 25.0% |
! | AAATCCTTCTTTCAATGAAA+CGG | + | chr6.1:73518263-73518282 | MS.gene05440:CDS | 25.0% |
! | AAGAATAATAAGGATCAACA+AGG | + | chr6.1:73517706-73517725 | MS.gene05440:CDS | 25.0% |
! | AATTTGATACTAACCAATGT+TGG | - | chr6.1:73520785-73520804 | None:intergenic | 25.0% |
! | ACCCTTATAATCAAATGAAA+AGG | - | chr6.1:73518880-73518899 | None:intergenic | 25.0% |
! | ATGAAATATGGCATGTATTA+AGG | - | chr6.1:73519103-73519122 | None:intergenic | 25.0% |
! | ATTAAGGAACTTCTTGTATT+TGG | - | chr6.1:73519087-73519106 | None:intergenic | 25.0% |
! | ATTGTAGAGAAATTGAACAA+TGG | - | chr6.1:73520518-73520537 | None:intergenic | 25.0% |
! | CATAAAAACGTTACTTCAAA+TGG | + | chr6.1:73518021-73518040 | MS.gene05440:CDS | 25.0% |
! | CATTGTGAAAGTTTAATCAA+TGG | - | chr6.1:73520635-73520654 | None:intergenic | 25.0% |
! | CCATATATACATATAATGTG+AGG | - | chr6.1:73518984-73519003 | None:intergenic | 25.0% |
! | CCTCACATTATATGTATATA+TGG | + | chr6.1:73518981-73519000 | MS.gene05440:intron | 25.0% |
! | CCTTTAATATGTAAAACATG+TGG | + | chr6.1:73520277-73520296 | MS.gene05440:intron | 25.0% |
! | CGTAAATTATGGCTTAAATT+CGG | - | chr6.1:73518502-73518521 | None:intergenic | 25.0% |
! | CTATATTTCTTCAATTTCCT+TGG | + | chr6.1:73517769-73517788 | MS.gene05440:CDS | 25.0% |
! | CTCAATAATGTACTTATTAG+TGG | + | chr6.1:73518755-73518774 | MS.gene05440:intron | 25.0% |
! | GAAAAAACAAAACATATTGG+TGG | - | chr6.1:73518652-73518671 | None:intergenic | 25.0% |
! | GAAAAACTTTAGATATGACA+AGG | - | chr6.1:73517740-73517759 | None:intergenic | 25.0% |
! | GAAAAGTGAGTTTAAAAATG+AGG | - | chr6.1:73519580-73519599 | None:intergenic | 25.0% |
! | TAATAAGTTTCTGATGTTGA+AGG | - | chr6.1:73519874-73519893 | None:intergenic | 25.0% |
! | TCTAATAAACTTAGATGGAT+GGG | - | chr6.1:73520864-73520883 | None:intergenic | 25.0% |
! | TCTGTTCTAATAAACTTAGA+TGG | - | chr6.1:73520869-73520888 | None:intergenic | 25.0% |
! | TGCATCTAATTGTTTACTTT+AGG | - | chr6.1:73519055-73519074 | None:intergenic | 25.0% |
! | TTAATACATGCCATATTTCA+TGG | + | chr6.1:73519102-73519121 | MS.gene05440:intron | 25.0% |
! | TTCTAATAAACTTAGATGGA+TGG | - | chr6.1:73520865-73520884 | None:intergenic | 25.0% |
!! | ATTAACCATGTCTTATCTTT+TGG | + | chr6.1:73519890-73519909 | MS.gene05440:intron | 25.0% |
!! | ATTCTAATAGAACATTGACT+TGG | + | chr6.1:73520816-73520835 | MS.gene05440:CDS | 25.0% |
!! | CATTGATTAAACTTTCACAA+TGG | + | chr6.1:73520633-73520652 | MS.gene05440:CDS | 25.0% |
!! | CCACATGTTTTACATATTAA+AGG | - | chr6.1:73520280-73520299 | None:intergenic | 25.0% |
!! | TAATTTACGTCTAACCTTTT+CGG | + | chr6.1:73518513-73518532 | MS.gene05440:intron | 25.0% |
!! | TGAATGAAGAGGAATTATTT+TGG | + | chr6.1:73518085-73518104 | MS.gene05440:CDS | 25.0% |
!!! | AACAGGTTAGAGTTTTTTAT+AGG | - | chr6.1:73520038-73520057 | None:intergenic | 25.0% |
!!! | AGATGTGACTATTGATTTTT+TGG | + | chr6.1:73520886-73520905 | MS.gene05440:CDS | 25.0% |
!!! | CATTGGTTAGTATCAAATTT+TGG | + | chr6.1:73520786-73520805 | MS.gene05440:CDS | 25.0% |
!!! | GCATTTATGTTTTTGACTAA+AGG | + | chr6.1:73518165-73518184 | MS.gene05440:CDS | 25.0% |
!!! | TGTTTTTTCAAGGTCAAATT+AGG | + | chr6.1:73518663-73518682 | MS.gene05440:intron | 25.0% |
!!! | TTCTAATAGAACATTGACTT+GGG | + | chr6.1:73520817-73520836 | MS.gene05440:CDS | 25.0% |
AAACTTTCACAATGGAGAAA+AGG | + | chr6.1:73520641-73520660 | MS.gene05440:CDS | 30.0% | |
AAATTCTTCAAGGGAAATGA+AGG | + | chr6.1:73518216-73518235 | MS.gene05440:CDS | 30.0% | |
AACTTTCACAATGGAGAAAA+GGG | + | chr6.1:73520642-73520661 | MS.gene05440:CDS | 30.0% | |
AAGATGGATCTTGAAATTGT+TGG | - | chr6.1:73517879-73517898 | None:intergenic | 30.0% | |
AATGGAGGTTTATGAATCAT+AGG | - | chr6.1:73518126-73518145 | None:intergenic | 30.0% | |
AATTCTTCAAGGGAAATGAA+GGG | + | chr6.1:73518217-73518236 | MS.gene05440:CDS | 30.0% | |
ACATTGCGTATTATATGTAG+GGG | - | chr6.1:73520218-73520237 | None:intergenic | 30.0% | |
ACCTTTGGTATTTGTTTGAA+TGG | - | chr6.1:73518144-73518163 | None:intergenic | 30.0% | |
ATAGTGTGATTCTCAAATGT+TGG | + | chr6.1:73518380-73518399 | MS.gene05440:intron | 30.0% | |
ATCAAAAGTAGGACAAAAAC+AGG | - | chr6.1:73520055-73520074 | None:intergenic | 30.0% | |
ATCTATTTACCTCTAATGGA+CGG | - | chr6.1:73518466-73518485 | None:intergenic | 30.0% | |
CAAATACTAGAATATGACCA+AGG | - | chr6.1:73517789-73517808 | None:intergenic | 30.0% | |
CAATTGAATTGCATCAACTT+TGG | - | chr6.1:73521025-73521044 | None:intergenic | 30.0% | |
CCACAATAGTTAAAGCAAAA+CGG | + | chr6.1:73519499-73519518 | MS.gene05440:intron | 30.0% | |
CTAATAAACTTAGATGGATG+GGG | - | chr6.1:73520863-73520882 | None:intergenic | 30.0% | |
CTTGGTCATATTCTAGTATT+TGG | + | chr6.1:73517787-73517806 | MS.gene05440:CDS | 30.0% | |
GACACATGATTATACAATAG+TGG | - | chr6.1:73519159-73519178 | None:intergenic | 30.0% | |
GACATTGCGTATTATATGTA+GGG | - | chr6.1:73520219-73520238 | None:intergenic | 30.0% | |
GAGTATCTATTTACCTCTAA+TGG | - | chr6.1:73518470-73518489 | None:intergenic | 30.0% | |
GTGAGTTTAAAAATGAGGAA+TGG | - | chr6.1:73519575-73519594 | None:intergenic | 30.0% | |
GTTTCATTGAAAGAAGGATT+TGG | - | chr6.1:73518264-73518283 | None:intergenic | 30.0% | |
GTTTGGTTATGATCATTTGA+TGG | - | chr6.1:73517964-73517983 | None:intergenic | 30.0% | |
TAAACCGTTTCATTGAAAGA+AGG | - | chr6.1:73518270-73518289 | None:intergenic | 30.0% | |
TAATAAAATGGTAACTCCTG+TGG | + | chr6.1:73518729-73518748 | MS.gene05440:intron | 30.0% | |
TACCAACTGAGTTAAACTTA+CGG | + | chr6.1:73520242-73520261 | MS.gene05440:intron | 30.0% | |
TATGCATGATATGAATGAAG+AGG | + | chr6.1:73518074-73518093 | MS.gene05440:CDS | 30.0% | |
TCCATTCAAACAAATACCAA+AGG | + | chr6.1:73518140-73518159 | MS.gene05440:CDS | 30.0% | |
TTTGGTATTTGTTTGAATGG+AGG | - | chr6.1:73518141-73518160 | None:intergenic | 30.0% | |
! | AAAAAATTGATGGCACATTG+TGG | - | chr6.1:73519301-73519320 | None:intergenic | 30.0% |
! | AAGTTTAACTCAGTTGGTAT+GGG | - | chr6.1:73520241-73520260 | None:intergenic | 30.0% |
! | AATGAGGAATGGAATTTTCT+TGG | - | chr6.1:73519564-73519583 | None:intergenic | 30.0% |
! | AGGTTTTTCTTGAGTTCATT+AGG | - | chr6.1:73520550-73520569 | None:intergenic | 30.0% |
! | ATGATTTTCTTTGGTTATGC+AGG | + | chr6.1:73520382-73520401 | MS.gene05440:intron | 30.0% |
! | ATGTTTGTCATTTGTTTGCA+AGG | + | chr6.1:73520957-73520976 | MS.gene05440:CDS | 30.0% |
! | CTCACATTATGTGCATTTTT+GGG | + | chr6.1:73519027-73519046 | MS.gene05440:intron | 30.0% |
! | GAATCTTCTTGCTTCATTTT+TGG | - | chr6.1:73518957-73518976 | None:intergenic | 30.0% |
! | GAGCTTACACATTTTAAATG+TGG | + | chr6.1:73520161-73520180 | MS.gene05440:intron | 30.0% |
! | TAAGTTTAACTCAGTTGGTA+TGG | - | chr6.1:73520242-73520261 | None:intergenic | 30.0% |
! | TGGTTAGTATCAAATTTTGG+AGG | + | chr6.1:73520789-73520808 | MS.gene05440:CDS | 30.0% |
! | TTTGAGATGTTTGATGAGAT+AGG | - | chr6.1:73517940-73517959 | None:intergenic | 30.0% |
!! | AAGTTTCTAAGATGAGTAAG+TGG | - | chr6.1:73519955-73519974 | None:intergenic | 30.0% |
!! | AGTTTCTAAGATGAGTAAGT+GGG | - | chr6.1:73519954-73519973 | None:intergenic | 30.0% |
!! | CATATTCTAGTATTTGGTGT+TGG | + | chr6.1:73517793-73517812 | MS.gene05440:CDS | 30.0% |
!! | GGAATTTTTGAAGATTCCAA+TGG | + | chr6.1:73518050-73518069 | MS.gene05440:CDS | 30.0% |
!! | GTGAAGAAGTTTTCTAGAAA+AGG | - | chr6.1:73518600-73518619 | None:intergenic | 30.0% |
!! | TTAGTATCAAATTTTGGAGG+AGG | + | chr6.1:73520792-73520811 | MS.gene05440:CDS | 30.0% |
!!! | TGACTATTGATTTTTTGGAG+AGG | + | chr6.1:73520891-73520910 | MS.gene05440:CDS | 30.0% |
!!! | TTGATTTTTTGGAGAGGTTA+AGG | + | chr6.1:73520897-73520916 | MS.gene05440:CDS | 30.0% |
AAACGTTACTTCAAATGGGT+TGG | + | chr6.1:73518026-73518045 | MS.gene05440:CDS | 35.0% | |
AGGAGGTGAATGAGAAATAT+GGG | - | chr6.1:73517920-73517939 | None:intergenic | 35.0% | |
AGGATTGAATCTAACCGAAA+AGG | - | chr6.1:73518530-73518549 | None:intergenic | 35.0% | |
CCAAAAATGCACATAATGTG+AGG | - | chr6.1:73519029-73519048 | None:intergenic | 35.0% | |
CCTCTGTAATCCATGAAATA+TGG | - | chr6.1:73519115-73519134 | None:intergenic | 35.0% | |
CCTTGCACTTCATATAGTTT+CGG | + | chr6.1:73520691-73520710 | MS.gene05440:CDS | 35.0% | |
CGAAACTATATGAAGTGCAA+GGG | - | chr6.1:73520693-73520712 | None:intergenic | 35.0% | |
CTCAAACAGATCACAAATCA+TGG | - | chr6.1:73518922-73518941 | None:intergenic | 35.0% | |
CTGAAAGTAGTACAAAACGT+TGG | - | chr6.1:73520484-73520503 | None:intergenic | 35.0% | |
GAACTCAAGAAAAACCTTTG+TGG | + | chr6.1:73520553-73520572 | MS.gene05440:CDS | 35.0% | |
GAATGAGAAATATGGGAAGA+TGG | - | chr6.1:73517913-73517932 | None:intergenic | 35.0% | |
GGACATTGCGTATTATATGT+AGG | - | chr6.1:73520220-73520239 | None:intergenic | 35.0% | |
GTGTACCAAAAGATAAGACA+TGG | - | chr6.1:73519898-73519917 | None:intergenic | 35.0% | |
TAGGAGGTGAATGAGAAATA+TGG | - | chr6.1:73517921-73517940 | None:intergenic | 35.0% | |
TAGTGTTCATCACTATAGCA+TGG | - | chr6.1:73520758-73520777 | None:intergenic | 35.0% | |
TGTGATTCTCAAATGTTGGT+TGG | + | chr6.1:73518384-73518403 | MS.gene05440:intron | 35.0% | |
TTATAGATTCCGTCCATTAG+AGG | + | chr6.1:73518454-73518473 | MS.gene05440:intron | 35.0% | |
TTCATATCATGCATAGCCAT+TGG | - | chr6.1:73518069-73518088 | None:intergenic | 35.0% | |
TTCTATCAATGCGAAGAGTT+TGG | + | chr6.1:73517990-73518009 | MS.gene05440:CDS | 35.0% | |
TTGAAGAATTTCTCCCACAA+AGG | - | chr6.1:73518207-73518226 | None:intergenic | 35.0% | |
TTGTGGGAGAAATTCTTCAA+GGG | + | chr6.1:73518207-73518226 | MS.gene05440:CDS | 35.0% | |
TTTGTGGGAGAAATTCTTCA+AGG | + | chr6.1:73518206-73518225 | MS.gene05440:CDS | 35.0% | |
! | AATTTTCTTGGACCTGCAAA+AGG | - | chr6.1:73519552-73519571 | None:intergenic | 35.0% |
! | ACAGAGGATTCTTGTGTTTT+TGG | + | chr6.1:73519128-73519147 | MS.gene05440:intron | 35.0% |
! | ATGTGTAAGCTCTAGTCATT+AGG | - | chr6.1:73520153-73520172 | None:intergenic | 35.0% |
! | ATTTTCTTTGGTTATGCAGG+AGG | + | chr6.1:73520385-73520404 | MS.gene05440:intron | 35.0% |
! | CCATATTTCATGGATTACAG+AGG | + | chr6.1:73519112-73519131 | MS.gene05440:intron | 35.0% |
! | CCGTTTTGCTTTAACTATTG+TGG | - | chr6.1:73519502-73519521 | None:intergenic | 35.0% |
! | CCTCACATTATGTGCATTTT+TGG | + | chr6.1:73519026-73519045 | MS.gene05440:intron | 35.0% |
! | GACTAAAGGACCTGTTTTAT+TGG | + | chr6.1:73518179-73518198 | MS.gene05440:CDS | 35.0% |
! | TCTTTTGGTACACACATTGT+TGG | + | chr6.1:73519905-73519924 | MS.gene05440:intron | 35.0% |
!! | GATGGATTGAAGCTAAAAGA+TGG | - | chr6.1:73517895-73517914 | None:intergenic | 35.0% |
!! | TTTGGTGTTGGATTACTCAT+TGG | + | chr6.1:73517805-73517824 | MS.gene05440:CDS | 35.0% |
!! | TTTTTGGAGAGGTTAAGGTT+TGG | + | chr6.1:73520902-73520921 | MS.gene05440:CDS | 35.0% |
!!! | ATTTTGTGGACTAGCTTCAT+TGG | + | chr6.1:73519377-73519396 | MS.gene05440:intron | 35.0% |
!!! | TGTTTTATTGGCTCCTTTGT+GGG | + | chr6.1:73518191-73518210 | MS.gene05440:CDS | 35.0% |
AATGGAGAAAAGGGTCACAA+TGG | + | chr6.1:73520651-73520670 | MS.gene05440:CDS | 40.0% | |
ACATGAACCCATTCTATTGG+TGG | + | chr6.1:73519928-73519947 | MS.gene05440:intron | 40.0% | |
AGCAATCTATCCAAAGCATG+AGG | - | chr6.1:73520992-73521011 | None:intergenic | 40.0% | |
CACAAAGGAGCCAATAAAAC+AGG | - | chr6.1:73518192-73518211 | None:intergenic | 40.0% | |
CACCGTAAGTTTAACTCAGT+TGG | - | chr6.1:73520247-73520266 | None:intergenic | 40.0% | |
CCGAAACTATATGAAGTGCA+AGG | - | chr6.1:73520694-73520713 | None:intergenic | 40.0% | |
GAAATTCACTCCTCATGCTT+TGG | + | chr6.1:73520979-73520998 | MS.gene05440:CDS | 40.0% | |
GAGATGTTTGATGAGATAGG+AGG | - | chr6.1:73517937-73517956 | None:intergenic | 40.0% | |
GATCAAAGCTCAGTCTTTCA+TGG | + | chr6.1:73518291-73518310 | MS.gene05440:CDS | 40.0% | |
GTACATTATTGAGCTACCAC+AGG | - | chr6.1:73518748-73518767 | None:intergenic | 40.0% | |
GTTCATCACTATAGCATGGA+GGG | - | chr6.1:73520754-73520773 | None:intergenic | 40.0% | |
TCGGTTAGATTCAATCCTGT+TGG | + | chr6.1:73518532-73518551 | MS.gene05440:intron | 40.0% | |
TGAACACTACTTGCCAACAT+TGG | + | chr6.1:73520769-73520788 | MS.gene05440:CDS | 40.0% | |
TGCGTATTATATGTAGGGGT+CGG | - | chr6.1:73520214-73520233 | None:intergenic | 40.0% | |
TGGACATGAACCCATTCTAT+TGG | + | chr6.1:73519925-73519944 | MS.gene05440:intron | 40.0% | |
TGTTCATCACTATAGCATGG+AGG | - | chr6.1:73520755-73520774 | None:intergenic | 40.0% | |
TTCAATCCTGTTGGCAAAAC+TGG | + | chr6.1:73518541-73518560 | MS.gene05440:intron | 40.0% | |
TTGGTTGGATGAGTCATTCT+CGG | + | chr6.1:73518399-73518418 | MS.gene05440:intron | 40.0% | |
TTTGAAAACGTACCCTGCTT+GGG | - | chr6.1:73518326-73518345 | None:intergenic | 40.0% | |
! | AATTGATGGCACATTGTGGT+AGG | - | chr6.1:73519297-73519316 | None:intergenic | 40.0% |
! | ATGTGGAGAAGTGTGATATC+TGG | + | chr6.1:73520178-73520197 | MS.gene05440:intron | 40.0% |
! | TGTGGAGAAGTGTGATATCT+GGG | + | chr6.1:73520179-73520198 | MS.gene05440:intron | 40.0% |
! | TTTGATTCCACTCCTTTTGC+AGG | + | chr6.1:73519537-73519556 | MS.gene05440:intron | 40.0% |
!! | ACTTGGGTTGATTGGTCAAA+AGG | + | chr6.1:73520833-73520852 | MS.gene05440:CDS | 40.0% |
!! | GAACATTGACTTGGGTTGAT+TGG | + | chr6.1:73520825-73520844 | MS.gene05440:CDS | 40.0% |
!! | GGAAGCACTTGTAAGTACAA+TGG | + | chr6.1:73520923-73520942 | MS.gene05440:CDS | 40.0% |
!! | TTTTGAAAACGTACCCTGCT+TGG | - | chr6.1:73518327-73518346 | None:intergenic | 40.0% |
!!! | CTGTTTTATTGGCTCCTTTG+TGG | + | chr6.1:73518190-73518209 | MS.gene05440:CDS | 40.0% |
AACAGCACCTTCTAGGTCAT+AGG | - | chr6.1:73520582-73520601 | None:intergenic | 45.0% | |
AAGTGGGCCACCAATAGAAT+GGG | - | chr6.1:73519938-73519957 | None:intergenic | 45.0% | |
GCGTATTATATGTAGGGGTC+GGG | - | chr6.1:73520213-73520232 | None:intergenic | 45.0% | |
GGGTGAGAATAGCATGATAG+AGG | + | chr6.1:73520415-73520434 | MS.gene05440:CDS | 45.0% | |
GGTTATGCAGGAGGTAAAGT+GGG | + | chr6.1:73520394-73520413 | MS.gene05440:intron | 45.0% | |
GTTATGCAGGAGGTAAAGTG+GGG | + | chr6.1:73520395-73520414 | MS.gene05440:intron | 45.0% | |
TAAGTGGGCCACCAATAGAA+TGG | - | chr6.1:73519939-73519958 | None:intergenic | 45.0% | |
TAGGTCATAGGCTTCCACAA+AGG | - | chr6.1:73520570-73520589 | None:intergenic | 45.0% | |
TGGTTATGCAGGAGGTAAAG+TGG | + | chr6.1:73520393-73520412 | MS.gene05440:intron | 45.0% | |
! | GTGGAGAAGTGTGATATCTG+GGG | + | chr6.1:73520180-73520199 | MS.gene05440:intron | 45.0% |
! | GTTTTGCCAGTTTTGCCAAC+AGG | - | chr6.1:73518550-73518569 | None:intergenic | 45.0% |
!! | CGTTACTTCAAATGGGTTGG+AGG | + | chr6.1:73518029-73518048 | MS.gene05440:CDS | 45.0% |
!! | TATGACCTAGAAGGTGCTGT+TGG | + | chr6.1:73520581-73520600 | MS.gene05440:CDS | 45.0% |
!! | TGGGTTGATTGGTCAAAAGG+TGG | + | chr6.1:73520836-73520855 | MS.gene05440:CDS | 45.0% |
!! | ATTTAATAAAAAAAAATTGA+TGG | - | chr6.1:73519311-73519330 | None:intergenic | 5.0% |
!! | TTTGATAAAAAAAAAATAAA+AGG | - | chr6.1:73520127-73520146 | None:intergenic | 5.0% |
!!! | ATAATTTTTTAGTATTATTT+AGG | + | chr6.1:73519469-73519488 | MS.gene05440:intron | 5.0% |
!!! | TAATTTATTTTCATAATATT+AGG | + | chr6.1:73519232-73519251 | MS.gene05440:intron | 5.0% |
!!! | TAATTTTTTAGTATTATTTA+GGG | + | chr6.1:73519470-73519489 | MS.gene05440:intron | 5.0% |
GTACCCTGCTTGGGATTCTT+CGG | - | chr6.1:73518317-73518336 | None:intergenic | 50.0% | |
GTGGAAGCCTATGACCTAGA+AGG | + | chr6.1:73520572-73520591 | MS.gene05440:CDS | 50.0% | |
TCTTGGACCTGCAAAAGGAG+TGG | - | chr6.1:73519547-73519566 | None:intergenic | 50.0% | |
ATGGCCGAAGAATCCCAAGC+AGG | + | chr6.1:73518310-73518329 | MS.gene05440:CDS | 55.0% | |
CACGTCCAACAGCACCTTCT+AGG | - | chr6.1:73520589-73520608 | None:intergenic | 55.0% | |
TGGCCGAAGAATCCCAAGCA+GGG | + | chr6.1:73518311-73518330 | MS.gene05440:CDS | 55.0% | |
!! | CTAGAAGGTGCTGTTGGACG+TGG | + | chr6.1:73520587-73520606 | MS.gene05440:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 73517703 | 73521045 | 73517703 | ID=MS.gene05440 |
chr6.1 | mRNA | 73517703 | 73521045 | 73517703 | ID=MS.gene05440.t1;Parent=MS.gene05440 |
chr6.1 | exon | 73517703 | 73518332 | 73517703 | ID=MS.gene05440.t1.exon1;Parent=MS.gene05440.t1 |
chr6.1 | CDS | 73517703 | 73518332 | 73517703 | ID=cds.MS.gene05440.t1;Parent=MS.gene05440.t1 |
chr6.1 | exon | 73520404 | 73521045 | 73520404 | ID=MS.gene05440.t1.exon2;Parent=MS.gene05440.t1 |
chr6.1 | CDS | 73520404 | 73521045 | 73520404 | ID=cds.MS.gene05440.t1;Parent=MS.gene05440.t1 |
Gene Sequence |
Protein sequence |