Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055210.t1 | XP_013448949.1 | 90.8 | 487 | 45 | 0 | 1 | 487 | 1 | 487 | 1.10E-234 | 822.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055210.t1 | Q9ATB4 | 55.6 | 471 | 199 | 4 | 18 | 483 | 18 | 483 | 3.7e-138 | 493.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055210.t1 | A0A072U0P5 | 90.8 | 487 | 45 | 0 | 1 | 487 | 1 | 487 | 8.0e-235 | 822.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene055210.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055210 | MS.gene59465 | PPI |
| MS.gene055210 | MS.gene68059 | PPI |
| MS.gene055210 | MS.gene64762 | PPI |
| MS.gene055210 | MS.gene010619 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055210.t1 | MTR_7g063290 | 90.760 | 487 | 45 | 0 | 1 | 487 | 1 | 487 | 0.0 | 875 |
| MS.gene055210.t1 | MTR_2g026310 | 71.508 | 537 | 82 | 8 | 18 | 487 | 19 | 551 | 0.0 | 744 |
| MS.gene055210.t1 | MTR_2g026380 | 71.850 | 508 | 109 | 6 | 1 | 487 | 1 | 495 | 0.0 | 696 |
| MS.gene055210.t1 | MTR_3g081360 | 47.852 | 512 | 216 | 8 | 17 | 483 | 4 | 509 | 7.82e-156 | 453 |
| MS.gene055210.t1 | MTR_3g082790 | 47.187 | 551 | 217 | 8 | 7 | 483 | 10 | 560 | 4.48e-153 | 447 |
| MS.gene055210.t1 | MTR_3g082790 | 48.350 | 515 | 194 | 6 | 41 | 483 | 6 | 520 | 1.80e-151 | 442 |
| MS.gene055210.t1 | MTR_3g081420 | 66.827 | 208 | 57 | 1 | 292 | 487 | 2 | 209 | 1.41e-88 | 270 |
| MS.gene055210.t1 | MTR_3g081380 | 61.728 | 162 | 60 | 1 | 18 | 177 | 16 | 177 | 1.83e-67 | 215 |
| MS.gene055210.t1 | MTR_7g062030 | 73.684 | 95 | 21 | 1 | 1 | 95 | 19 | 109 | 2.49e-35 | 128 |
| MS.gene055210.t1 | MTR_3g081390 | 63.333 | 90 | 33 | 0 | 89 | 178 | 36 | 125 | 4.75e-30 | 114 |
| MS.gene055210.t1 | MTR_3g081410 | 54.545 | 88 | 26 | 1 | 325 | 398 | 1 | 88 | 1.08e-18 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055210.t1 | AT4G16420 | 57.173 | 481 | 179 | 8 | 18 | 485 | 18 | 484 | 0.0 | 530 |
| MS.gene055210.t1 | AT4G16420 | 57.054 | 482 | 179 | 8 | 18 | 485 | 18 | 485 | 0.0 | 530 |
| MS.gene055210.t1 | AT4G16420 | 56.639 | 482 | 177 | 7 | 18 | 485 | 18 | 481 | 0.0 | 529 |
| MS.gene055210.t1 | AT3G07740 | 43.893 | 524 | 237 | 7 | 19 | 485 | 22 | 545 | 3.66e-138 | 409 |
| MS.gene055210.t1 | AT3G07740 | 43.836 | 511 | 231 | 6 | 31 | 485 | 14 | 524 | 3.75e-138 | 408 |
| MS.gene055210.t1 | AT3G07740 | 43.315 | 531 | 237 | 8 | 19 | 485 | 22 | 552 | 1.71e-135 | 402 |
| MS.gene055210.t1 | AT3G07740 | 43.763 | 473 | 210 | 6 | 69 | 485 | 2 | 474 | 7.03e-124 | 370 |
Find 114 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGTCGTTTCTTGAGGATTT+TGG | 0.167305 | 7.4:-40815503 | None:intergenic |
| TATATTATAGGATCGGATTC+TGG | 0.183755 | 7.4:+40815258 | MS.gene055210:intron |
| AAATGTATGGCATGAATAAC+TGG | 0.272278 | 7.4:+40814768 | MS.gene055210:CDS |
| AGTAGCTCGCCCTGCAGGTC+TGG | 0.289473 | 7.4:-40816263 | None:intergenic |
| AAACGTCTGTGCTGCGAGTT+AGG | 0.293920 | 7.4:+40816441 | MS.gene055210:CDS |
| ACAGACTCCTCAAGAAATTA+TGG | 0.304851 | 7.4:+40815470 | MS.gene055210:intron |
| AGTTCTGTGTTCAGAGATAA+TGG | 0.309266 | 7.4:-40815982 | None:intergenic |
| TTTGGAACCCCGCGATTGTT+TGG | 0.312150 | 7.4:-40816211 | None:intergenic |
| GAAAAGAATTCAAGAGCTTA+AGG | 0.314875 | 7.4:+40816007 | MS.gene055210:CDS |
| AAGAAACGACGGCCCTTCTT+TGG | 0.315629 | 7.4:+40815514 | MS.gene055210:CDS |
| ATGCTCATTAAGAAGGGATT+TGG | 0.323014 | 7.4:+40816597 | MS.gene055210:CDS |
| AGTGGAAATAACTCAGAATA+TGG | 0.325175 | 7.4:+40813421 | MS.gene055210:CDS |
| CTCTCCATGCTTCCCTCTTC+CGG | 0.329198 | 7.4:+40814865 | MS.gene055210:CDS |
| TGATACGTATCTATAATAAA+AGG | 0.333141 | 7.4:+40815669 | MS.gene055210:CDS |
| ACAAAAGCAATCATGCTTAC+AGG | 0.334147 | 7.4:+40814324 | MS.gene055210:CDS |
| TCAACACATAAGTCAAAATC+TGG | 0.338230 | 7.4:-40814269 | None:intergenic |
| TCCCTCTCATTTGCCCCGAC+TGG | 0.345302 | 7.4:+40814588 | MS.gene055210:CDS |
| TTGGAACCCCGCGATTGTTT+GGG | 0.353877 | 7.4:-40816210 | None:intergenic |
| ACACTATAGGATTGTGTACT+TGG | 0.367311 | 7.4:+40814841 | MS.gene055210:CDS |
| TACTGTAATATCGATATTAC+AGG | 0.392999 | 7.4:+40814218 | MS.gene055210:CDS |
| TTCAAGTTATGTCAATGAAA+TGG | 0.396353 | 7.4:+40816285 | MS.gene055210:CDS |
| TCGCAGGAAGCTCGTGCTGC+TGG | 0.397798 | 7.4:+40816124 | MS.gene055210:intron |
| GGTGTTAAATCCTTCTCAAA+TGG | 0.404781 | 7.4:-40815879 | None:intergenic |
| TCCGCAGACATCAAGGCATT+TGG | 0.409190 | 7.4:-40816229 | None:intergenic |
| TGCAGGTGGAACTAACAAAA+AGG | 0.414771 | 7.4:+40815302 | MS.gene055210:CDS |
| ATACACCATGTCGACCTTCA+TGG | 0.423954 | 7.4:-40816571 | None:intergenic |
| TAGGACATGTCTCATGTTGT+TGG | 0.424875 | 7.4:+40814967 | MS.gene055210:intron |
| TCTTCATCCGCGTTCCAGTC+GGG | 0.425170 | 7.4:-40814602 | None:intergenic |
| TGTTGGAACAAAGAACAAAA+AGG | 0.431777 | 7.4:+40814808 | MS.gene055210:CDS |
| TCTGCTGATCCCAGACCTGC+AGG | 0.434755 | 7.4:+40816253 | MS.gene055210:CDS |
| ATATTATAGGATCGGATTCT+GGG | 0.435344 | 7.4:+40815259 | MS.gene055210:intron |
| TCTTGCCATGGGGAAAGGGC+AGG | 0.439550 | 7.4:+40815008 | MS.gene055210:CDS |
| GTAGCTCGCCCTGCAGGTCT+GGG | 0.445211 | 7.4:-40816262 | None:intergenic |
| AACTCAGAATATGGAGCTGC+AGG | 0.445953 | 7.4:+40813430 | MS.gene055210:CDS |
| GTTCATGCGCTTTCATACTA+AGG | 0.450239 | 7.4:+40815935 | MS.gene055210:CDS |
| CTGTCAGTACAAATGATTGC+TGG | 0.451807 | 7.4:+40816501 | MS.gene055210:CDS |
| AAGTTGAAGAAAGTGCCCTT+AGG | 0.452945 | 7.4:+40816164 | MS.gene055210:CDS |
| GGCACACGGCACACTTAATC+CGG | 0.453805 | 7.4:-40814247 | None:intergenic |
| TGAGCAATTACTCGCTGATA+TGG | 0.455025 | 7.4:+40815598 | MS.gene055210:CDS |
| GGATTTAACACCAGAGGAAA+AGG | 0.457443 | 7.4:+40815890 | MS.gene055210:CDS |
| AGGCATGCACTGAACACTAT+AGG | 0.458600 | 7.4:+40814828 | MS.gene055210:CDS |
| AACTTCTTGCCATGGGGAAA+GGG | 0.466541 | 7.4:+40815004 | MS.gene055210:CDS |
| TTGTAGGGACTTGAAATGTA+TGG | 0.477689 | 7.4:+40814755 | MS.gene055210:intron |
| AAGGAGCGGGTGAAGCGAAA+AGG | 0.478432 | 7.4:+40814177 | MS.gene055210:CDS |
| AAGCACTTTCTCTTGCCCTA+AGG | 0.483082 | 7.4:-40816180 | None:intergenic |
| GAACTTCTTGCCATGGGGAA+AGG | 0.484313 | 7.4:+40815003 | MS.gene055210:CDS |
| CCACTAGCTTCAACCAAAGA+AGG | 0.487227 | 7.4:-40815527 | None:intergenic |
| CTTGAAGTAGCTCGCCCTGC+AGG | 0.492075 | 7.4:-40816268 | None:intergenic |
| TTCTTCATCCGCGTTCCAGT+CGG | 0.492141 | 7.4:-40814603 | None:intergenic |
| CTTCATCCGCGTTCCAGTCG+GGG | 0.497867 | 7.4:-40814601 | None:intergenic |
| GTATGATATGCTCATTAAGA+AGG | 0.500449 | 7.4:+40816590 | MS.gene055210:CDS |
| GAAGCATGTCATACCGGAAG+AGG | 0.501514 | 7.4:-40814878 | None:intergenic |
| TCGATATTACAGGACAAATC+CGG | 0.502784 | 7.4:+40814228 | MS.gene055210:CDS |
| GCAGCATGTGTCTTGACTGA+GGG | 0.510463 | 7.4:-40815282 | None:intergenic |
| AGCACTTTCTCTTGCCCTAA+GGG | 0.511703 | 7.4:-40816179 | None:intergenic |
| CCTTCTTTGGTTGAAGCTAG+TGG | 0.513297 | 7.4:+40815527 | MS.gene055210:CDS |
| AACGTCTGTGCTGCGAGTTA+GGG | 0.514367 | 7.4:+40816442 | MS.gene055210:CDS |
| AAAAGGCATCCAATAGAGGC+GGG | 0.517884 | 7.4:+40815319 | MS.gene055210:CDS |
| CTAGTGGTTATAACCCGAAA+AGG | 0.518651 | 7.4:+40815543 | MS.gene055210:CDS |
| TGCTCATCGGATGTTCCAGC+TGG | 0.519198 | 7.4:+40816545 | MS.gene055210:CDS |
| CGACCTTCATGGTATCCAGC+TGG | 0.522843 | 7.4:-40816560 | None:intergenic |
| AGTTGAAGAAAGTGCCCTTA+GGG | 0.524489 | 7.4:+40816165 | MS.gene055210:CDS |
| AACTGTGTATCTGAAGATGC+AGG | 0.531293 | 7.4:+40816473 | MS.gene055210:CDS |
| AGGAGCGGGTGAAGCGAAAA+GGG | 0.534590 | 7.4:+40814178 | MS.gene055210:CDS |
| ATGTGGTCCCAAACAATCGC+GGG | 0.535746 | 7.4:+40816203 | MS.gene055210:CDS |
| TCAGTCAAGACACATGCTGC+AGG | 0.536875 | 7.4:+40815285 | MS.gene055210:CDS |
| ATCACCCTGCCCTTTCCCCA+TGG | 0.538821 | 7.4:-40815013 | None:intergenic |
| CTTCAAAATCCGATGCTCAT+CGG | 0.540300 | 7.4:+40816532 | MS.gene055210:CDS |
| ATCTTCAGATACACAGTTGG+AGG | 0.541660 | 7.4:-40816468 | None:intergenic |
| CAGAGAAGAACTTCTTGCCA+TGG | 0.541694 | 7.4:+40814996 | MS.gene055210:CDS |
| AGAAGGGCCGTCGTTTCTTG+AGG | 0.547054 | 7.4:-40815510 | None:intergenic |
| GGCAAGAGAAAGTGCTTATG+TGG | 0.547957 | 7.4:+40816186 | MS.gene055210:CDS |
| CAAAAGCAATCATGCTTACA+GGG | 0.548051 | 7.4:+40814325 | MS.gene055210:CDS |
| AGAGAAGAACTTCTTGCCAT+GGG | 0.548697 | 7.4:+40814997 | MS.gene055210:CDS |
| CTTGCCATGGGGAAAGGGCA+GGG | 0.550128 | 7.4:+40815009 | MS.gene055210:CDS |
| TGGTTATAACCCGAAAAGGC+AGG | 0.554434 | 7.4:+40815547 | MS.gene055210:CDS |
| AGCAGAGTCCGCAGACATCA+AGG | 0.554768 | 7.4:-40816236 | None:intergenic |
| ATTTCCTCCATAATTTCTTG+AGG | 0.554820 | 7.4:-40815477 | None:intergenic |
| GGAAGAAATTCATACTTGAA+AGG | 0.555899 | 7.4:+40815838 | MS.gene055210:CDS |
| TTCCAGTCGGGGCAAATGAG+AGG | 0.561768 | 7.4:-40814590 | None:intergenic |
| TGCAGCATGTGTCTTGACTG+AGG | 0.563434 | 7.4:-40815283 | None:intergenic |
| AAGGCATCCAATAGAGGCGG+GGG | 0.579187 | 7.4:+40815321 | MS.gene055210:CDS |
| CTGGAACATCCGATGAGCAT+CGG | 0.579223 | 7.4:-40816541 | None:intergenic |
| AAAGGCATCCAATAGAGGCG+GGG | 0.582889 | 7.4:+40815320 | MS.gene055210:CDS |
| TCCAGTCGGGGCAAATGAGA+GGG | 0.588487 | 7.4:-40814589 | None:intergenic |
| ATATGCAAATCCATTTGAGA+AGG | 0.591672 | 7.4:+40815869 | MS.gene055210:CDS |
| TGCATCTTCAGATACACAGT+TGG | 0.592535 | 7.4:-40816471 | None:intergenic |
| TGTGAGTTAGGTCAAGGAGC+GGG | 0.592638 | 7.4:+40814164 | MS.gene055210:intron |
| TATGATATGCTCATTAAGAA+GGG | 0.593230 | 7.4:+40816591 | MS.gene055210:CDS |
| CACTAGCTTCAACCAAAGAA+GGG | 0.597471 | 7.4:-40815526 | None:intergenic |
| TGAGAAGGATTTAACACCAG+AGG | 0.597905 | 7.4:+40815884 | MS.gene055210:CDS |
| CTGCTGATCCCAGACCTGCA+GGG | 0.599308 | 7.4:+40816254 | MS.gene055210:CDS |
| CATTTGCCCCGACTGGAACG+CGG | 0.599728 | 7.4:+40814595 | MS.gene055210:CDS |
| CAATCATGCTTACAGGGTCA+TGG | 0.600463 | 7.4:+40814331 | MS.gene055210:CDS |
| GAAGAAGTTGCTGAGCATGT+TGG | 0.602780 | 7.4:+40814791 | MS.gene055210:CDS |
| GTTCCAGCTGGATACCATGA+AGG | 0.604849 | 7.4:+40816557 | MS.gene055210:CDS |
| GTCAAGACACATGCTGCAGG+TGG | 0.607552 | 7.4:+40815288 | MS.gene055210:CDS |
| AAGCATGTCATACCGGAAGA+GGG | 0.618765 | 7.4:-40814877 | None:intergenic |
| CAACACATAAGTCAAAATCT+GGG | 0.618792 | 7.4:-40814268 | None:intergenic |
| GGGCAGGGTGATGACAAGAA+AGG | 0.622437 | 7.4:+40815024 | MS.gene055210:CDS |
| TCCAAATGCCTTGATGTCTG+CGG | 0.623348 | 7.4:+40816228 | MS.gene055210:CDS |
| CATACCGGAAGAGGGAAGCA+TGG | 0.631897 | 7.4:-40814869 | None:intergenic |
| TAAGTCAAAATCTGGGCACA+CGG | 0.634031 | 7.4:-40814261 | None:intergenic |
| CCAAAATCCTCAAGAAACGA+CGG | 0.647065 | 7.4:+40815503 | MS.gene055210:CDS |
| TATGTGGTCCCAAACAATCG+CGG | 0.657727 | 7.4:+40816202 | MS.gene055210:CDS |
| GACTCCTCAAGAAATTATGG+AGG | 0.662832 | 7.4:+40815473 | MS.gene055210:intron |
| GGCTTGATGAAAGAGAGCGC+AGG | 0.663647 | 7.4:+40815817 | MS.gene055210:intron |
| GGATACCATGAAGGTCGACA+TGG | 0.672299 | 7.4:+40816566 | MS.gene055210:CDS |
| AATGTATGGCATGAATAACT+GGG | 0.679265 | 7.4:+40814769 | MS.gene055210:CDS |
| TTGTGAGTTAGGTCAAGGAG+CGG | 0.679425 | 7.4:+40814163 | MS.gene055210:intron |
| TGTGGTCCCAAACAATCGCG+GGG | 0.704963 | 7.4:+40816204 | MS.gene055210:CDS |
| GAGAAGAACTTCTTGCCATG+GGG | 0.705178 | 7.4:+40814998 | MS.gene055210:CDS |
| TGTGTATCTGAAGATGCAGG+AGG | 0.724507 | 7.4:+40816476 | MS.gene055210:CDS |
| GTTTAACGACTCTGACACTG+CGG | 0.772673 | 7.4:+40815622 | MS.gene055210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATAAAAATTAAAAAAATG+TGG | - | chr7.4:40813515-40813534 | None:intergenic | 10.0% |
| !! | ATATGATAAATCATTATATT+TGG | + | chr7.4:40814676-40814695 | MS.gene055210:intron | 10.0% |
| !! | ATTTATTCATTTATGATTAA+TGG | + | chr7.4:40814110-40814129 | MS.gene055210:intron | 10.0% |
| !!! | AAAATACTTTTTTTTTTAAG+AGG | - | chr7.4:40812654-40812673 | None:intergenic | 10.0% |
| !!! | AATATATTTTCATTGTAATT+AGG | + | chr7.4:40813274-40813293 | MS.gene055210:intron | 10.0% |
| !!! | ATGTTTTTTTTTTTTTTTAG+AGG | + | chr7.4:40812454-40812473 | MS.gene055210:intron | 10.0% |
| !!! | TTATTTTAATGAAAATCAAT+TGG | + | chr7.4:40812790-40812809 | MS.gene055210:intron | 10.0% |
| !!! | TTCATTAAAATAAATGATTT+TGG | - | chr7.4:40812783-40812802 | None:intergenic | 10.0% |
| !!! | TTTATGTAACTAATTTTAAT+TGG | + | chr7.4:40812550-40812569 | MS.gene055210:intron | 10.0% |
| !!! | TTTTACAAAGTAATAAATAA+AGG | - | chr7.4:40813152-40813171 | None:intergenic | 10.0% |
| !! | AAAAAAACAAAAATTAGTGA+GGG | + | chr7.4:40813552-40813571 | MS.gene055210:intron | 15.0% |
| !! | AAAATAAAATGTAGTGTTTA+TGG | - | chr7.4:40812702-40812721 | None:intergenic | 15.0% |
| !! | AATAAAATGATAATTCACAT+TGG | - | chr7.4:40815221-40815240 | None:intergenic | 15.0% |
| !! | ACATCAAAAGAAAAAAAAAA+TGG | - | chr7.4:40812118-40812137 | None:intergenic | 15.0% |
| !! | ATAAATAGACAATTGAATTA+AGG | - | chr7.4:40814092-40814111 | None:intergenic | 15.0% |
| !! | ATCTAAATTAAATTTCATTC+AGG | - | chr7.4:40812369-40812388 | None:intergenic | 15.0% |
| !! | ATCTATCGTTTATATATTAT+AGG | + | chr7.4:40815246-40815265 | MS.gene055210:intron | 15.0% |
| !! | TAAAAAAACAAAAATTAGTG+AGG | + | chr7.4:40813551-40813570 | MS.gene055210:intron | 15.0% |
| !! | TAAATAGACAATTGAATTAA+GGG | - | chr7.4:40814091-40814110 | None:intergenic | 15.0% |
| !! | TTTGAATTGAAAAATATTGA+AGG | + | chr7.4:40815796-40815815 | MS.gene055210:intron | 15.0% |
| !!! | CAATAATTTTTTTTGTTGTA+GGG | + | chr7.4:40814740-40814759 | MS.gene055210:intron | 15.0% |
| !!! | CATTTTTAAAACGATATTTT+TGG | + | chr7.4:40812892-40812911 | MS.gene055210:intron | 15.0% |
| !!! | TAAAATAAATGATTTTGGAT+TGG | - | chr7.4:40812778-40812797 | None:intergenic | 15.0% |
| !!! | TCTATATCAGTTTTTTAATA+TGG | + | chr7.4:40814538-40814557 | MS.gene055210:intron | 15.0% |
| !!! | TTGTTGATAAAATTGTTATT+AGG | + | chr7.4:40813312-40813331 | MS.gene055210:intron | 15.0% |
| !! | AATATTGTGTAATGTCAATT+GGG | - | chr7.4:40815379-40815398 | None:intergenic | 20.0% |
| !! | ACTATTACGAATAATATAAC+AGG | - | chr7.4:40812157-40812176 | None:intergenic | 20.0% |
| !! | CAAAATACTTACATTCATAT+TGG | - | chr7.4:40812626-40812645 | None:intergenic | 20.0% |
| !! | CCTACAACAAAAAAAATTAT+TGG | - | chr7.4:40814742-40814761 | None:intergenic | 20.0% |
| !! | CTATTACGAATAATATAACA+GGG | - | chr7.4:40812156-40812175 | None:intergenic | 20.0% |
| !! | TATTACGAATAATATAACAG+GGG | - | chr7.4:40812155-40812174 | None:intergenic | 20.0% |
| !! | TCGTTTATATATTATAGGAT+CGG | + | chr7.4:40815251-40815270 | MS.gene055210:intron | 20.0% |
| !! | TGATACGTATCTATAATAAA+AGG | + | chr7.4:40815669-40815688 | MS.gene055210:CDS | 20.0% |
| !!! | AAAGGTGTGAATTTTATATT+TGG | + | chr7.4:40815345-40815364 | MS.gene055210:intron | 20.0% |
| !!! | AATGTTTGAACATAATTTTC+TGG | + | chr7.4:40814135-40814154 | MS.gene055210:intron | 20.0% |
| !!! | ACAAGATACAATTTTCAATT+TGG | + | chr7.4:40813017-40813036 | MS.gene055210:intron | 20.0% |
| !!! | ACTAATTTTAATTGGATGAT+AGG | + | chr7.4:40812558-40812577 | MS.gene055210:intron | 20.0% |
| !!! | ACTTTTTTTTTTAAGAGGAA+TGG | - | chr7.4:40812649-40812668 | None:intergenic | 20.0% |
| !!! | AGTATTTTTCCATTCATTAT+TGG | + | chr7.4:40812666-40812685 | MS.gene055210:intron | 20.0% |
| !!! | ATACAATTTTCAATTTGGTT+AGG | + | chr7.4:40813022-40813041 | MS.gene055210:intron | 20.0% |
| !!! | ATGTTTGAACATAATTTTCT+GGG | + | chr7.4:40814136-40814155 | MS.gene055210:intron | 20.0% |
| !!! | ATTTTTTATGAATTTGAGTG+TGG | - | chr7.4:40815738-40815757 | None:intergenic | 20.0% |
| !!! | CCAATAATTTTTTTTGTTGT+AGG | + | chr7.4:40814739-40814758 | MS.gene055210:intron | 20.0% |
| !!! | TTACATAAACAATTTTGTGT+AGG | - | chr7.4:40812539-40812558 | None:intergenic | 20.0% |
| !!! | TTGAGATCTAAAATAATTGA+TGG | - | chr7.4:40812936-40812955 | None:intergenic | 20.0% |
| ! | AAAACCAAAGAATGAAAATG+TGG | - | chr7.4:40813796-40813815 | None:intergenic | 25.0% |
| ! | AAAGAATAGCCAATAATGAA+TGG | - | chr7.4:40812678-40812697 | None:intergenic | 25.0% |
| ! | AATTACTCACAATTCTTCAA+AGG | + | chr7.4:40812583-40812602 | MS.gene055210:intron | 25.0% |
| ! | AATTGAATTAAGGGTTGTTA+GGG | - | chr7.4:40814082-40814101 | None:intergenic | 25.0% |
| ! | AGAAACCAACAAAACTAAAA+TGG | - | chr7.4:40815702-40815721 | None:intergenic | 25.0% |
| ! | AGGAAAAACAAAATTAGAGA+GGG | - | chr7.4:40813678-40813697 | None:intergenic | 25.0% |
| ! | AGGAAAACATTTGAAAGTAA+TGG | - | chr7.4:40814364-40814383 | None:intergenic | 25.0% |
| ! | ATTACGAATAATATAACAGG+GGG | - | chr7.4:40812154-40812173 | None:intergenic | 25.0% |
| ! | CAATATTGTGTAATGTCAAT+TGG | - | chr7.4:40815380-40815399 | None:intergenic | 25.0% |
| ! | CATTCTTTCAGATAGATTTA+GGG | + | chr7.4:40815165-40815184 | MS.gene055210:intron | 25.0% |
| ! | CGAGTAATCATAAAAACATA+GGG | + | chr7.4:40813180-40813199 | MS.gene055210:intron | 25.0% |
| ! | CTAGAGAGTAAATGATAATT+AGG | + | chr7.4:40812281-40812300 | MS.gene055210:intron | 25.0% |
| ! | TAAGTTTAACAAGACATCAA+AGG | - | chr7.4:40814384-40814403 | None:intergenic | 25.0% |
| ! | TAATTTAGATGTGTAGTCAT+TGG | + | chr7.4:40812379-40812398 | MS.gene055210:intron | 25.0% |
| ! | TACTGTAATATCGATATTAC+AGG | + | chr7.4:40814218-40814237 | MS.gene055210:CDS | 25.0% |
| ! | TAGGAAAAACAAAATTAGAG+AGG | - | chr7.4:40813679-40813698 | None:intergenic | 25.0% |
| ! | TATGATATGCTCATTAAGAA+GGG | + | chr7.4:40816591-40816610 | MS.gene055210:CDS | 25.0% |
| ! | TCATTCTTTCAGATAGATTT+AGG | + | chr7.4:40815164-40815183 | MS.gene055210:intron | 25.0% |
| ! | TGGATGACATTAAATTGTTA+TGG | + | chr7.4:40816039-40816058 | MS.gene055210:intron | 25.0% |
| !! | TGGTAATGCAATTATATCAA+CGG | - | chr7.4:40814475-40814494 | None:intergenic | 25.0% |
| !! | TGTTTGAACATAATTTTCTG+GGG | + | chr7.4:40814137-40814156 | MS.gene055210:intron | 25.0% |
| !! | TTCAAGTTATGTCAATGAAA+TGG | + | chr7.4:40816285-40816304 | MS.gene055210:CDS | 25.0% |
| !!! | AAACTTAACATTTTGATCGA+TGG | + | chr7.4:40814397-40814416 | MS.gene055210:intron | 25.0% |
| !!! | AACAACCATTTTAGTTTTGT+TGG | + | chr7.4:40815694-40815713 | MS.gene055210:intron | 25.0% |
| !!! | ACCTAAATCAATTTGGTTTT+CGG | - | chr7.4:40812968-40812987 | None:intergenic | 25.0% |
| !!! | CCTATGTTTTTATGATTACT+CGG | - | chr7.4:40813182-40813201 | None:intergenic | 25.0% |
| !!! | GTTAATTTTATTTACCGTGT+AGG | + | chr7.4:40813374-40813393 | MS.gene055210:intron | 25.0% |
| !!! | TACACAATATTGATTCTTTG+AGG | + | chr7.4:40815388-40815407 | MS.gene055210:intron | 25.0% |
| !!! | TTGGTTTTTAAACTTTGACT+TGG | - | chr7.4:40813763-40813782 | None:intergenic | 25.0% |
| !!! | TTTTGGATTGGATGAAAATA+AGG | - | chr7.4:40812766-40812785 | None:intergenic | 25.0% |
| !!! | TTTTTAAACTTTGACTTGGA+TGG | - | chr7.4:40813759-40813778 | None:intergenic | 25.0% |
| AAATGTATGGCATGAATAAC+TGG | + | chr7.4:40814768-40814787 | MS.gene055210:CDS | 30.0% | |
| AATGTATGGCATGAATAACT+GGG | + | chr7.4:40814769-40814788 | MS.gene055210:CDS | 30.0% | |
| AGAAACTGTAACTGTATGTT+TGG | + | chr7.4:40814030-40814049 | MS.gene055210:intron | 30.0% | |
| AGACAAATTATCCTGTCAAT+AGG | - | chr7.4:40814567-40814586 | None:intergenic | 30.0% | |
| AGTGGAAATAACTCAGAATA+TGG | + | chr7.4:40813421-40813440 | MS.gene055210:CDS | 30.0% | |
| ATAAGTTTGACAAAGGAACA+AGG | - | chr7.4:40813109-40813128 | None:intergenic | 30.0% | |
| ATAATATTTGTACAACGCGT+TGG | + | chr7.4:40813862-40813881 | MS.gene055210:intron | 30.0% | |
| ATACAACATTTCTCACTACT+AGG | - | chr7.4:40813698-40813717 | None:intergenic | 30.0% | |
| ATAGAGTATGATGAGTGAAA+AGG | - | chr7.4:40813458-40813477 | None:intergenic | 30.0% | |
| ATATGCAAATCCATTTGAGA+AGG | + | chr7.4:40815869-40815888 | MS.gene055210:CDS | 30.0% | |
| ATATTATAGGATCGGATTCT+GGG | + | chr7.4:40815259-40815278 | MS.gene055210:intron | 30.0% | |
| ATTTAGTGAGGTAATTAGAG+AGG | - | chr7.4:40813605-40813624 | None:intergenic | 30.0% | |
| ATTTCCTCCATAATTTCTTG+AGG | - | chr7.4:40815480-40815499 | None:intergenic | 30.0% | |
| CAACACATAAGTCAAAATCT+GGG | - | chr7.4:40814271-40814290 | None:intergenic | 30.0% | |
| CAATTGAATTAAGGGTTGTT+AGG | - | chr7.4:40814083-40814102 | None:intergenic | 30.0% | |
| CCGAGTAATCATAAAAACAT+AGG | + | chr7.4:40813179-40813198 | MS.gene055210:intron | 30.0% | |
| GAAAAGAATTCAAGAGCTTA+AGG | + | chr7.4:40816007-40816026 | MS.gene055210:CDS | 30.0% | |
| GACAAATTATCCTGTCAATA+GGG | - | chr7.4:40814566-40814585 | None:intergenic | 30.0% | |
| GACAATTTCAAAGCTACAAA+TGG | - | chr7.4:40813923-40813942 | None:intergenic | 30.0% | |
| GGAAGAAATTCATACTTGAA+AGG | + | chr7.4:40815838-40815857 | MS.gene055210:CDS | 30.0% | |
| GTATGATATGCTCATTAAGA+AGG | + | chr7.4:40816590-40816609 | MS.gene055210:CDS | 30.0% | |
| TATATTATAGGATCGGATTC+TGG | + | chr7.4:40815258-40815277 | MS.gene055210:intron | 30.0% | |
| TCAACACATAAGTCAAAATC+TGG | - | chr7.4:40814272-40814291 | None:intergenic | 30.0% | |
| TGAAAATAAGGAAGTTGACT+CGG | - | chr7.4:40812754-40812773 | None:intergenic | 30.0% | |
| TGAACTCACCTAAATCAATT+TGG | - | chr7.4:40812975-40812994 | None:intergenic | 30.0% | |
| TGATATAATTGCATTACCAC+TGG | + | chr7.4:40814476-40814495 | MS.gene055210:intron | 30.0% | |
| TGTAATGTCAATTGGGATTT+AGG | - | chr7.4:40815372-40815391 | None:intergenic | 30.0% | |
| TGTCAATGACAAAAGAACTA+TGG | - | chr7.4:40815453-40815472 | None:intergenic | 30.0% | |
| TGTTGGAACAAAGAACAAAA+AGG | + | chr7.4:40814808-40814827 | MS.gene055210:CDS | 30.0% | |
| TTTACTCTCTAGTAGTATCA+TGG | - | chr7.4:40812273-40812292 | None:intergenic | 30.0% | |
| TTTAGTGAGGTAATTAGAGA+GGG | - | chr7.4:40813604-40813623 | None:intergenic | 30.0% | |
| ! | AAATCAAACCTTTTGCATGA+CGG | - | chr7.4:40813235-40813254 | None:intergenic | 30.0% |
| ! | AAATTTTGTGAGGGAAAACA+TGG | + | chr7.4:40813575-40813594 | MS.gene055210:intron | 30.0% |
| ! | ACCGAAAACCAAATTGATTT+AGG | + | chr7.4:40812964-40812983 | MS.gene055210:intron | 30.0% |
| ! | AGGATTTTATAGTGATTCTG+TGG | - | chr7.4:40813132-40813151 | None:intergenic | 30.0% |
| ! | ATAGCCACATTTTCATTCTT+TGG | + | chr7.4:40813789-40813808 | MS.gene055210:intron | 30.0% |
| ! | ATATCAAATTCCTGCCTTTT+CGG | - | chr7.4:40815560-40815579 | None:intergenic | 30.0% |
| ! | ATGCAACTATATGTTTTACG+TGG | + | chr7.4:40813352-40813371 | MS.gene055210:intron | 30.0% |
| ! | GCTAATCGTTCTTATTTACT+AGG | + | chr7.4:40814948-40814967 | MS.gene055210:intron | 30.0% |
| ! | GTGAAGTAAAAGTTAGTTTG+TGG | - | chr7.4:40812517-40812536 | None:intergenic | 30.0% |
| ! | TCTCTGACATTTGTTAAACA+TGG | + | chr7.4:40816101-40816120 | MS.gene055210:intron | 30.0% |
| ! | TGAAGAAATTTTGCTTCTAG+AGG | + | chr7.4:40814619-40814638 | MS.gene055210:CDS | 30.0% |
| ! | TTGCATTATGACTTGCATTA+TGG | - | chr7.4:40813338-40813357 | None:intergenic | 30.0% |
| !! | TAACATTTTGATCGATGGAA+AGG | + | chr7.4:40814402-40814421 | MS.gene055210:intron | 30.0% |
| !!! | TTTTTGTTTTCTGAAACCGT+CGG | + | chr7.4:40816398-40816417 | MS.gene055210:intron | 30.0% |
| AAAAAGAACAATGCTGCAAG+TGG | + | chr7.4:40813403-40813422 | MS.gene055210:CDS | 35.0% | |
| AAAATCCCTCACAAATTCCT+TGG | - | chr7.4:40813635-40813654 | None:intergenic | 35.0% | |
| AAAATGTGGCTATATGCAGT+TGG | - | chr7.4:40813782-40813801 | None:intergenic | 35.0% | |
| ACAAAAGCAATCATGCTTAC+AGG | + | chr7.4:40814324-40814343 | MS.gene055210:CDS | 35.0% | |
| ACACTATAGGATTGTGTACT+TGG | + | chr7.4:40814841-40814860 | MS.gene055210:CDS | 35.0% | |
| ACAGACTCCTCAAGAAATTA+TGG | + | chr7.4:40815470-40815489 | MS.gene055210:intron | 35.0% | |
| ACATACAGTTACAGTTTCTC+AGG | - | chr7.4:40814029-40814048 | None:intergenic | 35.0% | |
| AGAGCTTAAGGTTTGATTCA+TGG | + | chr7.4:40816019-40816038 | MS.gene055210:intron | 35.0% | |
| AGATTCACAAGCATTTATGC+AGG | - | chr7.4:40814443-40814462 | None:intergenic | 35.0% | |
| ATACACAATAAGTGCTCGTT+TGG | - | chr7.4:40813994-40814013 | None:intergenic | 35.0% | |
| ATATTCGAAGCATGTCATAC+CGG | - | chr7.4:40814887-40814906 | None:intergenic | 35.0% | |
| ATGCTCATTAAGAAGGGATT+TGG | + | chr7.4:40816597-40816616 | MS.gene055210:CDS | 35.0% | |
| CAAAAGCAATCATGCTTACA+GGG | + | chr7.4:40814325-40814344 | MS.gene055210:CDS | 35.0% | |
| CAATTATATCAACGGCGATT+TGG | - | chr7.4:40814467-40814486 | None:intergenic | 35.0% | |
| GGTGTTAAATCCTTCTCAAA+TGG | - | chr7.4:40815882-40815901 | None:intergenic | 35.0% | |
| GTTTGAGTGTGAAATACGTA+CGG | - | chr7.4:40813072-40813091 | None:intergenic | 35.0% | |
| TAATATGGTTCCCTATTGAC+AGG | + | chr7.4:40814553-40814572 | MS.gene055210:intron | 35.0% | |
| TAATTAGGCCTTGCAAGTAT+AGG | + | chr7.4:40812296-40812315 | MS.gene055210:intron | 35.0% | |
| TCGATATTACAGGACAAATC+CGG | + | chr7.4:40814228-40814247 | MS.gene055210:CDS | 35.0% | |
| TCTGTGGATAAGTTTGACAA+AGG | - | chr7.4:40813116-40813135 | None:intergenic | 35.0% | |
| TGAACAATCCTATACTTGCA+AGG | - | chr7.4:40812307-40812326 | None:intergenic | 35.0% | |
| TGATTTAGGTGAGTTCAGTT+TGG | + | chr7.4:40812978-40812997 | MS.gene055210:intron | 35.0% | |
| TGGATGGAAAAGAACAAGTT+TGG | - | chr7.4:40813743-40813762 | None:intergenic | 35.0% | |
| TGTTAGGGTTTATGTTTCCA+AGG | - | chr7.4:40814067-40814086 | None:intergenic | 35.0% | |
| TTAGAGAGGGAAATTAGTGA+CGG | - | chr7.4:40813665-40813684 | None:intergenic | 35.0% | |
| TTGTAGGGACTTGAAATGTA+TGG | + | chr7.4:40814755-40814774 | MS.gene055210:intron | 35.0% | |
| TTTATTTACCGTGTAGGTCA+AGG | + | chr7.4:40813380-40813399 | MS.gene055210:intron | 35.0% | |
| TTTGAGTGTGAAATACGTAC+GGG | - | chr7.4:40813071-40813090 | None:intergenic | 35.0% | |
| ! | GATTGCGGGTATTTTACAAA+TGG | + | chr7.4:40812488-40812507 | MS.gene055210:intron | 35.0% |
| ! | TAGTGAGGGAAATTTTGTGA+GGG | + | chr7.4:40813566-40813585 | MS.gene055210:intron | 35.0% |
| ! | TATCAAATTCCTGCCTTTTC+GGG | - | chr7.4:40815559-40815578 | None:intergenic | 35.0% |
| ! | TTAGTGAGGGAAATTTTGTG+AGG | + | chr7.4:40813565-40813584 | MS.gene055210:intron | 35.0% |
| ! | TTCTTTTTCCTTGACCTACA+CGG | - | chr7.4:40813391-40813410 | None:intergenic | 35.0% |
| ! | TTTAAAGTCGATGCGACTAA+TGG | + | chr7.4:40814649-40814668 | MS.gene055210:intron | 35.0% |
| !! | AACAAAAAGGCATCCAATAG+AGG | + | chr7.4:40815315-40815334 | MS.gene055210:CDS | 35.0% |
| !! | AATTGCATTACCACTGGTTT+CGG | + | chr7.4:40814482-40814501 | MS.gene055210:intron | 35.0% |
| !! | GTAAGCATGATTGCTTTTGT+GGG | - | chr7.4:40814324-40814343 | None:intergenic | 35.0% |
| !! | TAAGAAAAAAGCATCGATCG+AGG | + | chr7.4:40812006-40812025 | MS.gene055210:CDS | 35.0% |
| !! | TAAGCATGATTGCTTTTGTG+GGG | - | chr7.4:40814323-40814342 | None:intergenic | 35.0% |
| !! | TGTAAGCATGATTGCTTTTG+TGG | - | chr7.4:40814325-40814344 | None:intergenic | 35.0% |
| !!! | ATTTTGCTTCTAGAGGTACT+TGG | + | chr7.4:40814626-40814645 | MS.gene055210:intron | 35.0% |
| !!! | CATTCACTTTTTTCACTGCA+TGG | + | chr7.4:40816063-40816082 | MS.gene055210:intron | 35.0% |
| !!! | GATATTTTTGGCGTTAGCAT+CGG | + | chr7.4:40812904-40812923 | MS.gene055210:intron | 35.0% |
| !!! | TCGATCGATGCTTTTTTCTT+AGG | - | chr7.4:40812007-40812026 | None:intergenic | 35.0% |
| AACTGTGTATCTGAAGATGC+AGG | + | chr7.4:40816473-40816492 | MS.gene055210:CDS | 40.0% | |
| AGAGAAGAACTTCTTGCCAT+GGG | + | chr7.4:40814997-40815016 | MS.gene055210:CDS | 40.0% | |
| AGATGTGTAGTCATTGGTGT+TGG | + | chr7.4:40812385-40812404 | MS.gene055210:intron | 40.0% | |
| ATCTTCAGATACACAGTTGG+AGG | - | chr7.4:40816471-40816490 | None:intergenic | 40.0% | |
| ATGATGATCCGTCATGCAAA+AGG | + | chr7.4:40813224-40813243 | MS.gene055210:intron | 40.0% | |
| CCAAAATCCTCAAGAAACGA+CGG | + | chr7.4:40815503-40815522 | MS.gene055210:CDS | 40.0% | |
| CTAGTGGTTATAACCCGAAA+AGG | + | chr7.4:40815543-40815562 | MS.gene055210:CDS | 40.0% | |
| CTGTCAGTACAAATGATTGC+TGG | + | chr7.4:40816501-40816520 | MS.gene055210:CDS | 40.0% | |
| CTTCAAAATCCGATGCTCAT+CGG | + | chr7.4:40816532-40816551 | MS.gene055210:CDS | 40.0% | |
| CTTGGTCGCAAAATTTAGTG+AGG | - | chr7.4:40813617-40813636 | None:intergenic | 40.0% | |
| GACTCCTCAAGAAATTATGG+AGG | + | chr7.4:40815473-40815492 | MS.gene055210:intron | 40.0% | |
| GAGCACTTATTGTGTATGTG+TGG | + | chr7.4:40813997-40814016 | MS.gene055210:intron | 40.0% | |
| GGATTTAACACCAGAGGAAA+AGG | + | chr7.4:40815890-40815909 | MS.gene055210:CDS | 40.0% | |
| GTTCATGCGCTTTCATACTA+AGG | + | chr7.4:40815935-40815954 | MS.gene055210:CDS | 40.0% | |
| TAAGTCAAAATCTGGGCACA+CGG | - | chr7.4:40814264-40814283 | None:intergenic | 40.0% | |
| TAGGACATGTCTCATGTTGT+TGG | + | chr7.4:40814967-40814986 | MS.gene055210:intron | 40.0% | |
| TGAGAAGGATTTAACACCAG+AGG | + | chr7.4:40815884-40815903 | MS.gene055210:CDS | 40.0% | |
| TGAGCAATTACTCGCTGATA+TGG | + | chr7.4:40815598-40815617 | MS.gene055210:CDS | 40.0% | |
| TGCAGGTGGAACTAACAAAA+AGG | + | chr7.4:40815302-40815321 | MS.gene055210:CDS | 40.0% | |
| TGCATCTTCAGATACACAGT+TGG | - | chr7.4:40816474-40816493 | None:intergenic | 40.0% | |
| ! | AAGTGTTCTCTCTTGCGTTT+TGG | + | chr7.4:40812044-40812063 | MS.gene055210:intron | 40.0% |
| ! | AGGCTACTTTGAATGATTGC+GGG | + | chr7.4:40812474-40812493 | MS.gene055210:intron | 40.0% |
| ! | CACTAGCTTCAACCAAAGAA+GGG | - | chr7.4:40815529-40815548 | None:intergenic | 40.0% |
| ! | CATTTGTTAAACATGGTCGC+AGG | + | chr7.4:40816108-40816127 | MS.gene055210:intron | 40.0% |
| ! | CTCACTAAATTTTGCGACCA+AGG | + | chr7.4:40813615-40813634 | MS.gene055210:intron | 40.0% |
| ! | GAGGCTACTTTGAATGATTG+CGG | + | chr7.4:40812473-40812492 | MS.gene055210:intron | 40.0% |
| ! | GGATTTTGTGAGTTAGGTCA+AGG | + | chr7.4:40814158-40814177 | MS.gene055210:intron | 40.0% |
| ! | TGTGTTGAGTGCTTTTCTGT+TGG | + | chr7.4:40814284-40814303 | MS.gene055210:CDS | 40.0% |
| !! | AAAAAGGCATCCAATAGAGG+CGG | + | chr7.4:40815318-40815337 | MS.gene055210:CDS | 40.0% |
| !! | AAGTTGAAGAAAGTGCCCTT+AGG | + | chr7.4:40816164-40816183 | MS.gene055210:CDS | 40.0% |
| !! | AGTTGAAGAAAGTGCCCTTA+GGG | + | chr7.4:40816165-40816184 | MS.gene055210:CDS | 40.0% |
| !! | TAGCTTTGAAATTGTCGCTG+TGG | + | chr7.4:40813927-40813946 | MS.gene055210:intron | 40.0% |
| !! | TTCTGGGGATTTTGTGAGTT+AGG | + | chr7.4:40814152-40814171 | MS.gene055210:intron | 40.0% |
| AAAGTCGATGCGACTAATGG+TGG | + | chr7.4:40814652-40814671 | MS.gene055210:intron | 45.0% | |
| AACAATGTTGCCGAAACCAG+TGG | - | chr7.4:40814495-40814514 | None:intergenic | 45.0% | |
| AACTCAGAATATGGAGCTGC+AGG | + | chr7.4:40813430-40813449 | MS.gene055210:CDS | 45.0% | |
| AACTTCTTGCCATGGGGAAA+GGG | + | chr7.4:40815004-40815023 | MS.gene055210:CDS | 45.0% | |
| AAGCACTTTCTCTTGCCCTA+AGG | - | chr7.4:40816183-40816202 | None:intergenic | 45.0% | |
| AAGCATGTCATACCGGAAGA+GGG | - | chr7.4:40814880-40814899 | None:intergenic | 45.0% | |
| AAGTGAATGAATGCGTGCGT+TGG | - | chr7.4:40813897-40813916 | None:intergenic | 45.0% | |
| AGCACTTTCTCTTGCCCTAA+GGG | - | chr7.4:40816182-40816201 | None:intergenic | 45.0% | |
| AGGCATGCACTGAACACTAT+AGG | + | chr7.4:40814828-40814847 | MS.gene055210:CDS | 45.0% | |
| ATACACCATGTCGACCTTCA+TGG | - | chr7.4:40816574-40816593 | None:intergenic | 45.0% | |
| CAATCATGCTTACAGGGTCA+TGG | + | chr7.4:40814331-40814350 | MS.gene055210:CDS | 45.0% | |
| CAGAGAAGAACTTCTTGCCA+TGG | + | chr7.4:40814996-40815015 | MS.gene055210:CDS | 45.0% | |
| CCTTCTTTGGTTGAAGCTAG+TGG | + | chr7.4:40815527-40815546 | MS.gene055210:CDS | 45.0% | |
| GAAGAAGTTGCTGAGCATGT+TGG | + | chr7.4:40814791-40814810 | MS.gene055210:CDS | 45.0% | |
| GAGAAGAACTTCTTGCCATG+GGG | + | chr7.4:40814998-40815017 | MS.gene055210:CDS | 45.0% | |
| GTTTAACGACTCTGACACTG+CGG | + | chr7.4:40815622-40815641 | MS.gene055210:CDS | 45.0% | |
| TATGTGGTCCCAAACAATCG+CGG | + | chr7.4:40816202-40816221 | MS.gene055210:CDS | 45.0% | |
| TCCAAATGCCTTGATGTCTG+CGG | + | chr7.4:40816228-40816247 | MS.gene055210:CDS | 45.0% | |
| TGACAGAACATTACAGCCGA+CGG | - | chr7.4:40816417-40816436 | None:intergenic | 45.0% | |
| TGCGACCAAGGAATTTGTGA+GGG | + | chr7.4:40813627-40813646 | MS.gene055210:intron | 45.0% | |
| TGGTTATAACCCGAAAAGGC+AGG | + | chr7.4:40815547-40815566 | MS.gene055210:CDS | 45.0% | |
| TGTCGCTGTGGAATGAGTAT+CGG | + | chr7.4:40813939-40813958 | MS.gene055210:intron | 45.0% | |
| TGTGTATCTGAAGATGCAGG+AGG | + | chr7.4:40816476-40816495 | MS.gene055210:CDS | 45.0% | |
| TTGCGACCAAGGAATTTGTG+AGG | + | chr7.4:40813626-40813645 | MS.gene055210:intron | 45.0% | |
| TTGTGAGTTAGGTCAAGGAG+CGG | + | chr7.4:40814163-40814182 | MS.gene055210:intron | 45.0% | |
| ! | AGTGTTGCTCGATCTTCGTA+AGG | + | chr7.4:40813821-40813840 | MS.gene055210:intron | 45.0% |
| ! | CCACTAGCTTCAACCAAAGA+AGG | - | chr7.4:40815530-40815549 | None:intergenic | 45.0% |
| ! | CCGTCGTTTCTTGAGGATTT+TGG | - | chr7.4:40815506-40815525 | None:intergenic | 45.0% |
| ! | CGACATATTGCCTTTTCCTC+TGG | - | chr7.4:40815903-40815922 | None:intergenic | 45.0% |
| !! | AAAAGGCATCCAATAGAGGC+GGG | + | chr7.4:40815319-40815338 | MS.gene055210:CDS | 45.0% |
| !! | GGCAAGAGAAAGTGCTTATG+TGG | + | chr7.4:40816186-40816205 | MS.gene055210:CDS | 45.0% |
| !!! | TTTTTGGCGTTAGCATCGGT+CGG | + | chr7.4:40812908-40812927 | MS.gene055210:intron | 45.0% |
| !!! | ATTAAAATTTTTAATTTTGT+TGG | + | chr7.4:40813045-40813064 | MS.gene055210:intron | 5.0% |
| AAACGTCTGTGCTGCGAGTT+AGG | + | chr7.4:40816441-40816460 | MS.gene055210:CDS | 50.0% | |
| AACGTCTGTGCTGCGAGTTA+GGG | + | chr7.4:40816442-40816461 | MS.gene055210:CDS | 50.0% | |
| AAGAAACGACGGCCCTTCTT+TGG | + | chr7.4:40815514-40815533 | MS.gene055210:CDS | 50.0% | |
| ATGTGGTCCCAAACAATCGC+GGG | + | chr7.4:40816203-40816222 | MS.gene055210:CDS | 50.0% | |
| CTGGAACATCCGATGAGCAT+CGG | - | chr7.4:40816544-40816563 | None:intergenic | 50.0% | |
| GAACTTCTTGCCATGGGGAA+AGG | + | chr7.4:40815003-40815022 | MS.gene055210:CDS | 50.0% | |
| GAAGCATGTCATACCGGAAG+AGG | - | chr7.4:40814881-40814900 | None:intergenic | 50.0% | |
| GCAGCATGTGTCTTGACTGA+GGG | - | chr7.4:40815285-40815304 | None:intergenic | 50.0% | |
| GGATACCATGAAGGTCGACA+TGG | + | chr7.4:40816566-40816585 | MS.gene055210:CDS | 50.0% | |
| GTCGCTGTGGAATGAGTATC+GGG | + | chr7.4:40813940-40813959 | MS.gene055210:intron | 50.0% | |
| GTCGGCTGTAATGTTCTGTC+AGG | + | chr7.4:40816416-40816435 | MS.gene055210:intron | 50.0% | |
| GTTCCAGCTGGATACCATGA+AGG | + | chr7.4:40816557-40816576 | MS.gene055210:CDS | 50.0% | |
| TCAGTCAAGACACATGCTGC+AGG | + | chr7.4:40815285-40815304 | MS.gene055210:CDS | 50.0% | |
| TGCAGCATGTGTCTTGACTG+AGG | - | chr7.4:40815286-40815305 | None:intergenic | 50.0% | |
| TGTGAGTTAGGTCAAGGAGC+GGG | + | chr7.4:40814164-40814183 | MS.gene055210:intron | 50.0% | |
| TTCTTCATCCGCGTTCCAGT+CGG | - | chr7.4:40814606-40814625 | None:intergenic | 50.0% | |
| TTGGAACCCCGCGATTGTTT+GGG | - | chr7.4:40816213-40816232 | None:intergenic | 50.0% | |
| ! | TCCGCAGACATCAAGGCATT+TGG | - | chr7.4:40816232-40816251 | None:intergenic | 50.0% |
| ! | TTTGGAACCCCGCGATTGTT+TGG | - | chr7.4:40816214-40816233 | None:intergenic | 50.0% |
| !! | AAAGGCATCCAATAGAGGCG+GGG | + | chr7.4:40815320-40815339 | MS.gene055210:CDS | 50.0% |
| !!! | TTTTGGCGTTAGCATCGGTC+GGG | + | chr7.4:40812909-40812928 | MS.gene055210:intron | 50.0% |
| AAGGAGCGGGTGAAGCGAAA+AGG | + | chr7.4:40814177-40814196 | MS.gene055210:CDS | 55.0% | |
| AGAAGGGCCGTCGTTTCTTG+AGG | - | chr7.4:40815513-40815532 | None:intergenic | 55.0% | |
| AGCAGAGTCCGCAGACATCA+AGG | - | chr7.4:40816239-40816258 | None:intergenic | 55.0% | |
| AGGAGCGGGTGAAGCGAAAA+GGG | + | chr7.4:40814178-40814197 | MS.gene055210:CDS | 55.0% | |
| CATACCGGAAGAGGGAAGCA+TGG | - | chr7.4:40814872-40814891 | None:intergenic | 55.0% | |
| CGACCTTCATGGTATCCAGC+TGG | - | chr7.4:40816563-40816582 | None:intergenic | 55.0% | |
| CTCTCCATGCTTCCCTCTTC+CGG | + | chr7.4:40814865-40814884 | MS.gene055210:CDS | 55.0% | |
| GGCACACGGCACACTTAATC+CGG | - | chr7.4:40814250-40814269 | None:intergenic | 55.0% | |
| GGGCAGGGTGATGACAAGAA+AGG | + | chr7.4:40815024-40815043 | MS.gene055210:CDS | 55.0% | |
| GTCAAGACACATGCTGCAGG+TGG | + | chr7.4:40815288-40815307 | MS.gene055210:CDS | 55.0% | |
| GTTTGGATCGAAGCGTGCCT+TGG | + | chr7.4:40814047-40814066 | MS.gene055210:intron | 55.0% | |
| TCCAATAGAGGCGGGGGAAA+AGG | + | chr7.4:40815327-40815346 | MS.gene055210:CDS | 55.0% | |
| TCCAGTCGGGGCAAATGAGA+GGG | - | chr7.4:40814592-40814611 | None:intergenic | 55.0% | |
| TCTTCATCCGCGTTCCAGTC+GGG | - | chr7.4:40814605-40814624 | None:intergenic | 55.0% | |
| TGCTCATCGGATGTTCCAGC+TGG | + | chr7.4:40816545-40816564 | MS.gene055210:CDS | 55.0% | |
| TGTGGTCCCAAACAATCGCG+GGG | + | chr7.4:40816204-40816223 | MS.gene055210:CDS | 55.0% | |
| TTCCAGTCGGGGCAAATGAG+AGG | - | chr7.4:40814593-40814612 | None:intergenic | 55.0% | |
| ! | AAGGCATCCAATAGAGGCGG+GGG | + | chr7.4:40815321-40815340 | MS.gene055210:CDS | 55.0% |
| ! | ACCTTTTCCCCCGCCTCTAT+TGG | - | chr7.4:40815331-40815350 | None:intergenic | 55.0% |
| ! | GGCTTGATGAAAGAGAGCGC+AGG | + | chr7.4:40815817-40815836 | MS.gene055210:intron | 55.0% |
| ATCACCCTGCCCTTTCCCCA+TGG | - | chr7.4:40815016-40815035 | None:intergenic | 60.0% | |
| CATTTGCCCCGACTGGAACG+CGG | + | chr7.4:40814595-40814614 | MS.gene055210:CDS | 60.0% | |
| CTGCTGATCCCAGACCTGCA+GGG | + | chr7.4:40816254-40816273 | MS.gene055210:CDS | 60.0% | |
| CTTCATCCGCGTTCCAGTCG+GGG | - | chr7.4:40814604-40814623 | None:intergenic | 60.0% | |
| CTTGAAGTAGCTCGCCCTGC+AGG | - | chr7.4:40816271-40816290 | None:intergenic | 60.0% | |
| CTTGCCATGGGGAAAGGGCA+GGG | + | chr7.4:40815009-40815028 | MS.gene055210:CDS | 60.0% | |
| TCCCTCTCATTTGCCCCGAC+TGG | + | chr7.4:40814588-40814607 | MS.gene055210:CDS | 60.0% | |
| TCTGCTGATCCCAGACCTGC+AGG | + | chr7.4:40816253-40816272 | MS.gene055210:CDS | 60.0% | |
| TCTTGCCATGGGGAAAGGGC+AGG | + | chr7.4:40815008-40815027 | MS.gene055210:CDS | 60.0% | |
| AGTAGCTCGCCCTGCAGGTC+TGG | - | chr7.4:40816266-40816285 | None:intergenic | 65.0% | |
| GTAGCTCGCCCTGCAGGTCT+GGG | - | chr7.4:40816265-40816284 | None:intergenic | 65.0% | |
| TCGCAGGAAGCTCGTGCTGC+TGG | + | chr7.4:40816124-40816143 | MS.gene055210:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 40811992 | 40816629 | 40811992 | ID=MS.gene055210 |
| chr7.4 | mRNA | 40811992 | 40816629 | 40811992 | ID=MS.gene055210.t1;Parent=MS.gene055210 |
| chr7.4 | exon | 40811992 | 40812041 | 40811992 | ID=MS.gene055210.t1.exon1;Parent=MS.gene055210.t1 |
| chr7.4 | CDS | 40811992 | 40812041 | 40811992 | ID=cds.MS.gene055210.t1;Parent=MS.gene055210.t1 |
| chr7.4 | exon | 40813396 | 40813451 | 40813396 | ID=MS.gene055210.t1.exon2;Parent=MS.gene055210.t1 |
| chr7.4 | CDS | 40813396 | 40813451 | 40813396 | ID=cds.MS.gene055210.t1;Parent=MS.gene055210.t1 |
| chr7.4 | exon | 40814174 | 40814352 | 40814174 | ID=MS.gene055210.t1.exon3;Parent=MS.gene055210.t1 |
| chr7.4 | CDS | 40814174 | 40814352 | 40814174 | ID=cds.MS.gene055210.t1;Parent=MS.gene055210.t1 |
| chr7.4 | exon | 40814575 | 40814640 | 40814575 | ID=MS.gene055210.t1.exon4;Parent=MS.gene055210.t1 |
| chr7.4 | CDS | 40814575 | 40814640 | 40814575 | ID=cds.MS.gene055210.t1;Parent=MS.gene055210.t1 |
| chr7.4 | exon | 40814761 | 40814886 | 40814761 | ID=MS.gene055210.t1.exon5;Parent=MS.gene055210.t1 |
| chr7.4 | CDS | 40814761 | 40814886 | 40814761 | ID=cds.MS.gene055210.t1;Parent=MS.gene055210.t1 |
| chr7.4 | exon | 40814970 | 40815045 | 40814970 | ID=MS.gene055210.t1.exon6;Parent=MS.gene055210.t1 |
| chr7.4 | CDS | 40814970 | 40815045 | 40814970 | ID=cds.MS.gene055210.t1;Parent=MS.gene055210.t1 |
| chr7.4 | exon | 40815268 | 40815348 | 40815268 | ID=MS.gene055210.t1.exon7;Parent=MS.gene055210.t1 |
| chr7.4 | CDS | 40815268 | 40815348 | 40815268 | ID=cds.MS.gene055210.t1;Parent=MS.gene055210.t1 |
| chr7.4 | exon | 40815474 | 40815690 | 40815474 | ID=MS.gene055210.t1.exon8;Parent=MS.gene055210.t1 |
| chr7.4 | CDS | 40815474 | 40815690 | 40815474 | ID=cds.MS.gene055210.t1;Parent=MS.gene055210.t1 |
| chr7.4 | exon | 40815818 | 40816028 | 40815818 | ID=MS.gene055210.t1.exon9;Parent=MS.gene055210.t1 |
| chr7.4 | CDS | 40815818 | 40816028 | 40815818 | ID=cds.MS.gene055210.t1;Parent=MS.gene055210.t1 |
| chr7.4 | exon | 40816130 | 40816339 | 40816130 | ID=MS.gene055210.t1.exon10;Parent=MS.gene055210.t1 |
| chr7.4 | CDS | 40816130 | 40816339 | 40816130 | ID=cds.MS.gene055210.t1;Parent=MS.gene055210.t1 |
| chr7.4 | exon | 40816438 | 40816629 | 40816438 | ID=MS.gene055210.t1.exon11;Parent=MS.gene055210.t1 |
| chr7.4 | CDS | 40816438 | 40816629 | 40816438 | ID=cds.MS.gene055210.t1;Parent=MS.gene055210.t1 |
| Gene Sequence |
| Protein sequence |
