Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056282.t1 | XP_013470345.1 | 100 | 489 | 0 | 0 | 1 | 489 | 1 | 489 | 4.60E-281 | 976.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056282.t1 | Q9SZN1 | 96.9 | 489 | 13 | 2 | 1 | 489 | 1 | 487 | 1.3e-271 | 936.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056282.t1 | A0A072VSL4 | 100.0 | 489 | 0 | 0 | 1 | 489 | 1 | 489 | 3.3e-281 | 976.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056282 | MS.gene065000 | 0.828411 | 9.12E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene89324 | MS.gene056282 | PPI |
MS.gene46108 | MS.gene056282 | PPI |
MS.gene89800 | MS.gene056282 | PPI |
MS.gene056282 | MS.gene055205 | PPI |
MS.gene91577 | MS.gene056282 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056282.t1 | MTR_1g112870 | 100.000 | 489 | 0 | 0 | 1 | 489 | 1 | 489 | 0.0 | 1002 |
MS.gene056282.t1 | MTR_7g081010 | 98.364 | 489 | 6 | 2 | 1 | 489 | 1 | 487 | 0.0 | 978 |
MS.gene056282.t1 | MTR_0002s0550 | 29.086 | 361 | 210 | 9 | 48 | 384 | 33 | 371 | 5.68e-30 | 122 |
MS.gene056282.t1 | MTR_1g108765 | 28.846 | 364 | 228 | 8 | 89 | 444 | 153 | 493 | 1.13e-28 | 119 |
MS.gene056282.t1 | MTR_1g108770 | 28.642 | 405 | 251 | 12 | 52 | 444 | 118 | 496 | 1.58e-27 | 116 |
MS.gene056282.t1 | MTR_0002s0650 | 28.011 | 357 | 239 | 5 | 89 | 444 | 94 | 433 | 2.71e-26 | 112 |
MS.gene056282.t1 | MTR_3g035730 | 27.198 | 364 | 233 | 7 | 89 | 444 | 94 | 433 | 2.78e-25 | 108 |
MS.gene056282.t1 | MTR_7g021780 | 27.397 | 365 | 231 | 7 | 89 | 444 | 94 | 433 | 5.89e-25 | 108 |
MS.gene056282.t1 | MTR_7g033765 | 27.869 | 366 | 228 | 8 | 89 | 444 | 94 | 433 | 1.68e-24 | 107 |
MS.gene056282.t1 | MTR_4g451275 | 27.123 | 365 | 232 | 8 | 89 | 444 | 94 | 433 | 2.67e-24 | 105 |
MS.gene056282.t1 | MTR_0212s0040 | 26.331 | 338 | 235 | 5 | 57 | 391 | 62 | 388 | 1.83e-23 | 104 |
MS.gene056282.t1 | MTR_4g005410 | 28.936 | 235 | 158 | 4 | 226 | 453 | 303 | 535 | 3.81e-21 | 97.1 |
MS.gene056282.t1 | MTR_1829s0010 | 29.189 | 185 | 122 | 4 | 261 | 444 | 2 | 178 | 4.38e-13 | 70.9 |
MS.gene056282.t1 | MTR_2g066870 | 23.768 | 345 | 240 | 7 | 95 | 438 | 29 | 351 | 1.30e-12 | 70.1 |
MS.gene056282.t1 | MTR_2g008350 | 27.000 | 200 | 118 | 4 | 244 | 441 | 11 | 184 | 2.21e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene056282.t1 | AT4G38510 | 96.933 | 489 | 13 | 2 | 1 | 489 | 8 | 494 | 0.0 | 963 |
MS.gene056282.t1 | AT4G38510 | 96.933 | 489 | 13 | 2 | 1 | 489 | 1 | 487 | 0.0 | 962 |
MS.gene056282.t1 | AT4G38510 | 96.933 | 489 | 13 | 2 | 1 | 489 | 1 | 487 | 0.0 | 962 |
MS.gene056282.t1 | AT4G38510 | 96.933 | 489 | 13 | 2 | 1 | 489 | 1 | 487 | 0.0 | 962 |
MS.gene056282.t1 | AT4G38510 | 96.933 | 489 | 13 | 2 | 1 | 489 | 1 | 487 | 0.0 | 962 |
MS.gene056282.t1 | AT1G20260 | 95.464 | 485 | 22 | 0 | 3 | 487 | 1 | 485 | 0.0 | 953 |
MS.gene056282.t1 | AT1G76030 | 96.888 | 482 | 14 | 1 | 6 | 487 | 4 | 484 | 0.0 | 951 |
MS.gene056282.t1 | ATCG00120 | 27.809 | 356 | 212 | 6 | 84 | 437 | 87 | 399 | 1.14e-28 | 119 |
MS.gene056282.t1 | AT5G08690 | 28.967 | 397 | 246 | 11 | 60 | 444 | 121 | 493 | 3.48e-28 | 118 |
MS.gene056282.t1 | AT5G08670 | 28.967 | 397 | 246 | 11 | 60 | 444 | 121 | 493 | 4.28e-28 | 117 |
MS.gene056282.t1 | AT5G08680 | 28.967 | 397 | 246 | 11 | 60 | 444 | 124 | 496 | 5.20e-28 | 117 |
MS.gene056282.t1 | ATMG01190 | 27.492 | 331 | 226 | 5 | 57 | 384 | 62 | 381 | 3.46e-26 | 112 |
MS.gene056282.t1 | AT2G07698 | 27.219 | 338 | 232 | 5 | 57 | 391 | 332 | 658 | 5.17e-26 | 112 |
MS.gene056282.t1 | ATCG00480 | 28.090 | 356 | 238 | 5 | 90 | 444 | 95 | 433 | 7.18e-26 | 110 |
MS.gene056282.t1 | AT1G78900 | 28.936 | 235 | 158 | 4 | 226 | 453 | 302 | 534 | 2.83e-21 | 97.8 |
MS.gene056282.t1 | AT1G78900 | 28.936 | 235 | 158 | 4 | 226 | 453 | 302 | 534 | 2.83e-21 | 97.8 |
Find 143 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGACAATCTCTTGATATT+TGG | 0.086118 | 1.3:-76685574 | None:intergenic |
GCATGGTTAGAATTGGAATT+TGG | 0.112862 | 1.3:-76689549 | None:intergenic |
ACAGTTGTATCTGGAATTTC+TGG | 0.143455 | 1.3:+76690680 | MS.gene056282:intron |
TTGACAATCTCTTGATATTT+GGG | 0.268902 | 1.3:-76685573 | None:intergenic |
TTTACGACCGTACAGTTTAC+TGG | 0.269439 | 1.3:+76685977 | MS.gene056282:CDS |
GGTCGGATATTTAACGGTTC+TGG | 0.297261 | 1.3:+76686862 | MS.gene056282:CDS |
CATGGTTAGAATTGGAATTT+GGG | 0.316289 | 1.3:-76689548 | None:intergenic |
CCAGGATAACCACGTCTTCC+TGG | 0.316708 | 1.3:-76689454 | None:intergenic |
ATATTATTAACAGTTGTATC+TGG | 0.321630 | 1.3:+76690671 | MS.gene056282:intron |
TCACCACTGCAGAGTGCTAT+TGG | 0.329482 | 1.3:+76690318 | MS.gene056282:intron |
TCTTACTACTGCTGAATATC+TGG | 0.332465 | 1.3:+76689110 | MS.gene056282:CDS |
TCATTTGGCATGGTTAGAAT+TGG | 0.334129 | 1.3:-76689556 | None:intergenic |
TGCGGGTGTCGTAGGCTCCC+TGG | 0.338118 | 1.3:-76690728 | None:intergenic |
CACCACTGCAGAGTGCTATT+GGG | 0.340834 | 1.3:+76690319 | MS.gene056282:intron |
ATTATTTCTTTACCATCATT+TGG | 0.341729 | 1.3:-76689571 | None:intergenic |
CAGGTATTTGAAGGTACATC+TGG | 0.345618 | 1.3:+76685941 | MS.gene056282:intron |
GAGATTGTCAATATTCGTTT+AGG | 0.348480 | 1.3:+76685585 | MS.gene056282:CDS |
CTGTGCAGCAATTTCATTAT+GGG | 0.352240 | 1.3:-76687160 | None:intergenic |
TCTGTGCAGCAATTTCATTA+TGG | 0.352813 | 1.3:-76687161 | None:intergenic |
CAGCATCTCGGCTGTAAAAC+TGG | 0.358949 | 1.3:-76690839 | None:intergenic |
AAGTAAGCCTCAGGTAAAAT+TGG | 0.379673 | 1.3:-76686907 | None:intergenic |
GAGGCTTACTTGGATATATC+AGG | 0.401427 | 1.3:+76686919 | MS.gene056282:CDS |
GTGATAATACGTTCAATTGT+AGG | 0.404208 | 1.3:-76689075 | None:intergenic |
CATCCAACTCCTGATCTTAC+CGG | 0.404800 | 1.3:+76689683 | MS.gene056282:CDS |
AGGACTGTGTCTGGAGTTGC+CGG | 0.405257 | 1.3:+76685418 | MS.gene056282:CDS |
GGTTCTCTCACTAGGGTTGA+TGG | 0.409584 | 1.3:-76687037 | None:intergenic |
AGATTACCAAATTAAGGAAA+AGG | 0.411767 | 1.3:-76688468 | None:intergenic |
TGGCGAAAAGGCTGTTGTTC+AGG | 0.415818 | 1.3:+76685647 | MS.gene056282:CDS |
CCAAGCATGTCCAGTGATAC+AGG | 0.419348 | 1.3:-76686841 | None:intergenic |
TTTACGCCCCTCAATTCTTC+CGG | 0.423822 | 1.3:-76689515 | None:intergenic |
TCTTCCTGGCACCTCTTCTC+TGG | 0.425819 | 1.3:-76689440 | None:intergenic |
CAACAACAGCTTTCATTGCC+TGG | 0.434544 | 1.3:-76690534 | None:intergenic |
TCGGGATAGGTTCTCTCACT+AGG | 0.437152 | 1.3:-76687045 | None:intergenic |
TGAGAGGAAGTTTGTTGCCC+AGG | 0.437811 | 1.3:+76690710 | MS.gene056282:CDS |
ATGCTTGGTCGGATATTTAA+CGG | 0.442245 | 1.3:+76686856 | MS.gene056282:CDS |
ACAGAATACAGGACTGTGTC+TGG | 0.446233 | 1.3:+76685409 | MS.gene056282:intron |
GATTACCAAATTAAGGAAAA+GGG | 0.449091 | 1.3:-76688467 | None:intergenic |
TGATCTTACCGGATATATTA+CGG | 0.452298 | 1.3:+76689694 | MS.gene056282:CDS |
TAGAGACTGGAATATATTGC+GGG | 0.454648 | 1.3:-76690745 | None:intergenic |
ATTGGCGGACCATTGTCAAT+TGG | 0.464082 | 1.3:-76686889 | None:intergenic |
CCAGGAAGACGTGGTTATCC+TGG | 0.466984 | 1.3:+76689454 | MS.gene056282:CDS |
CTGCCCCTCCGTAATATATC+CGG | 0.472296 | 1.3:-76689702 | None:intergenic |
GGACAAGTTCTCGAGGTTGA+TGG | 0.472504 | 1.3:+76685627 | MS.gene056282:CDS |
TTATTAATGTCACAGAATAC+AGG | 0.473189 | 1.3:+76685398 | MS.gene056282:intron |
GTCAATATTCGTTTAGGCGA+TGG | 0.473500 | 1.3:+76685591 | MS.gene056282:CDS |
AGACCGGCAGCTGAAAATAG+AGG | 0.475986 | 1.3:-76687135 | None:intergenic |
TGAACGTGCCGGAAGAATTG+AGG | 0.476839 | 1.3:+76689507 | MS.gene056282:CDS |
GCGGGTGTCGTAGGCTCCCT+GGG | 0.477631 | 1.3:-76690727 | None:intergenic |
ACTATTGATCAGGTATTTGA+AGG | 0.479209 | 1.3:+76685932 | MS.gene056282:intron |
TCCAGTCTGTATCATCTCCT+CGG | 0.491457 | 1.3:-76687064 | None:intergenic |
GTAATATATCCGGTAAGATC+AGG | 0.495201 | 1.3:-76689692 | None:intergenic |
CTCAAGAATGACCAATGGTC+CGG | 0.496147 | 1.3:-76685437 | None:intergenic |
CTTTGAGGAGAACGGCTCAA+TGG | 0.497375 | 1.3:+76688435 | MS.gene056282:CDS |
GCACAGATTTGTCGTCAAGC+TGG | 0.499909 | 1.3:+76687177 | MS.gene056282:CDS |
CTCGAGAACTTGTCCACGCC+GGG | 0.500617 | 1.3:-76685619 | None:intergenic |
GACGACGGCACCTTGGAGAT+AGG | 0.501299 | 1.3:+76685151 | MS.gene056282:CDS |
CCAGTCTGTATCATCTCCTC+GGG | 0.502795 | 1.3:-76687063 | None:intergenic |
GCTGCCAGAGAAGAGGTGCC+AGG | 0.506143 | 1.3:+76689436 | MS.gene056282:CDS |
GAACGTGCCGGAAGAATTGA+GGG | 0.506526 | 1.3:+76689508 | MS.gene056282:CDS |
TTCTTTACCATCATTTGGCA+TGG | 0.507173 | 1.3:-76689566 | None:intergenic |
GAATATATTGCGGGTGTCGT+AGG | 0.509788 | 1.3:-76690736 | None:intergenic |
ATGTTCTTCCATCACTATCT+CGG | 0.513623 | 1.3:+76690186 | MS.gene056282:CDS |
CTGTATGCAAATTATGCCAT+TGG | 0.516378 | 1.3:+76690502 | MS.gene056282:CDS |
CTGTATCATCTCCTCGGGAT+AGG | 0.517113 | 1.3:-76687058 | None:intergenic |
TGCAGCTATGGGAGTTAACA+TGG | 0.517732 | 1.3:+76688387 | MS.gene056282:CDS |
CGACAATGACGACGGCACCT+TGG | 0.517816 | 1.3:+76685144 | MS.gene056282:CDS |
TGCCATTGGAAAGGATGTCC+AGG | 0.518353 | 1.3:+76690516 | MS.gene056282:CDS |
ATCACTATCTCGGTTGATGA+AGG | 0.519694 | 1.3:+76690196 | MS.gene056282:CDS |
ATTCTAACCATGCCAAATGA+TGG | 0.521293 | 1.3:+76689559 | MS.gene056282:CDS |
GTCTGGAGTTGCCGGACCAT+TGG | 0.523391 | 1.3:+76685426 | MS.gene056282:CDS |
ATCTTGCATGGACCTTACTC+CGG | 0.526356 | 1.3:+76690769 | MS.gene056282:CDS |
GTAAAACTGGTCAAGAGTCT+TGG | 0.529021 | 1.3:-76690826 | None:intergenic |
TGGGGAGGGAATGACTAGAA+AGG | 0.531100 | 1.3:+76690338 | MS.gene056282:CDS |
CAGGCAATGAAAGCTGTTGT+TGG | 0.535099 | 1.3:+76690535 | MS.gene056282:CDS |
GATATATCCAAGTAAGCCTC+AGG | 0.536974 | 1.3:-76686916 | None:intergenic |
TCTCGAGGTTGATGGCGAAA+AGG | 0.540595 | 1.3:+76685635 | MS.gene056282:CDS |
TCCATGCAAGATCTAGAGAC+TGG | 0.542399 | 1.3:-76690758 | None:intergenic |
CCTGTATCACTGGACATGCT+TGG | 0.543279 | 1.3:+76686841 | MS.gene056282:CDS |
TAGGCAGTTGCATAATAGAC+AGG | 0.544818 | 1.3:+76689736 | MS.gene056282:CDS |
TCCAGTCTCTAGATCTTGCA+TGG | 0.545696 | 1.3:+76690757 | MS.gene056282:CDS |
GGCACCTTGGAGATAGGAAT+GGG | 0.545991 | 1.3:+76685157 | MS.gene056282:CDS |
CGGCACCTTGGAGATAGGAA+TGG | 0.547991 | 1.3:+76685156 | MS.gene056282:CDS |
GAGAGGAAGTTTGTTGCCCA+GGG | 0.548471 | 1.3:+76690711 | MS.gene056282:CDS |
ATCATCAATTACCAGCATCT+CGG | 0.552362 | 1.3:-76690851 | None:intergenic |
AGTGATGGAAGAACATTGAT+TGG | 0.552550 | 1.3:-76690179 | None:intergenic |
TCTTGATTTATGCAGGGAGG+AGG | 0.554491 | 1.3:+76688337 | MS.gene056282:intron |
AACTGGTCAAGAGTCTTGGC+TGG | 0.554684 | 1.3:-76690822 | None:intergenic |
CCCGAGGAGATGATACAGAC+TGG | 0.555094 | 1.3:+76687063 | MS.gene056282:CDS |
GGAAGAATTGAGGGGCGTAA+AGG | 0.556865 | 1.3:+76689517 | MS.gene056282:CDS |
TTGAAGTTCTAAGATGGGTG+TGG | 0.557939 | 1.3:+76685108 | None:intergenic |
AAGCGTGACTTTGAGGAGAA+CGG | 0.558460 | 1.3:+76688427 | MS.gene056282:CDS |
ACCACTGCAGAGTGCTATTG+GGG | 0.563672 | 1.3:+76690320 | MS.gene056282:intron |
CGGGATAGGTTCTCTCACTA+GGG | 0.566355 | 1.3:-76687044 | None:intergenic |
TATACGATGAAGAAGTTCAC+GGG | 0.567632 | 1.3:-76690799 | None:intergenic |
GCAACAATTTATGAACGTGC+CGG | 0.568995 | 1.3:+76689496 | MS.gene056282:CDS |
TGCCTGGACATCCTTTCCAA+TGG | 0.569487 | 1.3:-76690518 | None:intergenic |
CTGCAGAGTGCTATTGGGGA+GGG | 0.572458 | 1.3:+76690324 | MS.gene056282:intron |
TATCACTGGACATGCTTGGT+CGG | 0.573162 | 1.3:+76686845 | MS.gene056282:CDS |
CTAGAGACTGGAATATATTG+CGG | 0.576024 | 1.3:-76690746 | None:intergenic |
TGTGCAGCAATTTCATTATG+GGG | 0.578028 | 1.3:-76687159 | None:intergenic |
TCATTCTGATGTGTCCAACC+AGG | 0.578586 | 1.3:+76690362 | MS.gene056282:CDS |
AGCACTTTCATCTGAGGACC+TGG | 0.579733 | 1.3:+76690564 | MS.gene056282:CDS |
TAAGCCTCAGGTAAAATTGG+CGG | 0.582523 | 1.3:-76686904 | None:intergenic |
AGGGGCAGATATACATCGAT+AGG | 0.599010 | 1.3:+76689717 | MS.gene056282:CDS |
ATGGAAGAACATTGATTGGT+GGG | 0.602705 | 1.3:-76690175 | None:intergenic |
AGGTATTTGAAGGTACATCT+GGG | 0.603787 | 1.3:+76685942 | MS.gene056282:intron |
AATTTCTGGACAAGTTTGAG+AGG | 0.606081 | 1.3:+76690694 | MS.gene056282:CDS |
ACTTTCTCAAGAATGACCAA+TGG | 0.606143 | 1.3:-76685442 | None:intergenic |
GTATACGATGAAGAAGTTCA+CGG | 0.610810 | 1.3:-76690800 | None:intergenic |
TATCCGGTAAGATCAGGAGT+TGG | 0.612787 | 1.3:-76689686 | None:intergenic |
TTCATCAACCGAGATAGTGA+TGG | 0.612897 | 1.3:-76690194 | None:intergenic |
AGAAGAAGCACTTTCATCTG+AGG | 0.617772 | 1.3:+76690558 | MS.gene056282:CDS |
GGTCATTCTTGAGAAAGTGA+AGG | 0.620043 | 1.3:+76685447 | MS.gene056282:CDS |
TTATGCTGATGCTCTTCGTG+AGG | 0.621125 | 1.3:+76689182 | MS.gene056282:CDS |
GTCATGAATTCTATTGCTAG+AGG | 0.622259 | 1.3:+76687102 | MS.gene056282:CDS |
GGTATCTGCTGCCAGAGAAG+AGG | 0.624465 | 1.3:+76689429 | MS.gene056282:intron |
GAAGAGGTGCCAGGAAGACG+TGG | 0.628045 | 1.3:+76689445 | MS.gene056282:CDS |
GACCGTACAGTTTACTGGAG+AGG | 0.629013 | 1.3:+76685982 | MS.gene056282:CDS |
GTGCAGCAATTTCATTATGG+GGG | 0.632413 | 1.3:-76687158 | None:intergenic |
TACCTCTCCAGTAAACTGTA+CGG | 0.633139 | 1.3:-76685984 | None:intergenic |
GATGGAAGAACATTGATTGG+TGG | 0.633609 | 1.3:-76690176 | None:intergenic |
ACTGCAGAGTGCTATTGGGG+AGG | 0.635578 | 1.3:+76690323 | MS.gene056282:intron |
GGCGATGGAACTACCCGGCG+TGG | 0.636786 | 1.3:+76685606 | MS.gene056282:CDS |
CGTACCCATTCCTATCTCCA+AGG | 0.637796 | 1.3:-76685161 | None:intergenic |
GACCGGCAGCTGAAAATAGA+GGG | 0.638267 | 1.3:-76687134 | None:intergenic |
CCTCGAGAACTTGTCCACGC+CGG | 0.642978 | 1.3:-76685620 | None:intergenic |
GAATATCTGGCGTATGAATG+TGG | 0.645805 | 1.3:+76689123 | MS.gene056282:CDS |
TGCAAATTATGCCATTGGAA+AGG | 0.646117 | 1.3:+76690507 | MS.gene056282:CDS |
GAAGTCTGATAATCTTCTTG+AGG | 0.648163 | 1.3:+76687218 | MS.gene056282:CDS |
CTTACCGGATATATTACGGA+GGG | 0.654500 | 1.3:+76689698 | MS.gene056282:CDS |
AGATCTGTATACATATAACC+AGG | 0.661413 | 1.3:-76689472 | None:intergenic |
CAAACAAGAAGAGACCTGGT+TGG | 0.666933 | 1.3:-76690376 | None:intergenic |
CCGGCGTGGACAAGTTCTCG+AGG | 0.672366 | 1.3:+76685620 | MS.gene056282:CDS |
TCTGGAAAACCAATTGACAA+TGG | 0.674567 | 1.3:+76686880 | MS.gene056282:CDS |
GTTTAGGCGATGGAACTACC+CGG | 0.676003 | 1.3:+76685601 | MS.gene056282:CDS |
AATGCTAGCGACAATGACGA+CGG | 0.701949 | 1.3:+76685136 | MS.gene056282:CDS |
TTACCGGATATATTACGGAG+GGG | 0.706702 | 1.3:+76689699 | MS.gene056282:CDS |
TAGTGAGAGAACCTATCCCG+AGG | 0.712174 | 1.3:+76687047 | MS.gene056282:CDS |
ATACGATGAAGAAGTTCACG+GGG | 0.717533 | 1.3:-76690798 | None:intergenic |
TCTTACCGGATATATTACGG+AGG | 0.726344 | 1.3:+76689697 | MS.gene056282:CDS |
GCAGTAGTAAGAGCAATACG+AGG | 0.737884 | 1.3:-76689099 | None:intergenic |
AACGTGCCGGAAGAATTGAG+GGG | 0.763048 | 1.3:+76689509 | MS.gene056282:CDS |
TACGATGAAGAAGTTCACGG+GGG | 0.801804 | 1.3:-76690797 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATTATATTATTAATTA+AGG | + | chr1.3:76687620-76687639 | MS.gene056282:intron | 0.0% |
!!! | TAATATATTTCTAATTATTC+AGG | + | chr1.3:76687009-76687028 | MS.gene056282:intron | 10.0% |
!!! | TTATAATTTTTTTAATAAGG+GGG | - | chr1.3:76688968-76688987 | None:intergenic | 10.0% |
!! | AAAAAAAAAGACTATCTTAA+TGG | + | chr1.3:76690458-76690477 | MS.gene056282:intron | 15.0% |
!! | AAACTATAAAATGACATTAA+CGG | - | chr1.3:76685897-76685916 | None:intergenic | 15.0% |
!! | GAAAAGAAATATTATAAGAT+AGG | + | chr1.3:76687390-76687409 | MS.gene056282:intron | 15.0% |
!! | TTATATGTAAACTATCTTAT+TGG | + | chr1.3:76690421-76690440 | MS.gene056282:intron | 15.0% |
!!! | AATTTTCTAAAAACGTTAAA+TGG | + | chr1.3:76688847-76688866 | MS.gene056282:intron | 15.0% |
!!! | ATAAACAGCATATATTTTTA+TGG | - | chr1.3:76686093-76686112 | None:intergenic | 15.0% |
!!! | TAAACAGCATATATTTTTAT+GGG | - | chr1.3:76686092-76686111 | None:intergenic | 15.0% |
!!! | TCTTTTTATTGATTTATCAA+TGG | - | chr1.3:76685244-76685263 | None:intergenic | 15.0% |
!!! | TTTTAAAGATTACCAAATTA+AGG | - | chr1.3:76688477-76688496 | None:intergenic | 15.0% |
!! | AAACTAATAGAATAGTAATC+AGG | - | chr1.3:76686594-76686613 | None:intergenic | 20.0% |
!! | AAATATTATAAGATAGGAAC+TGG | + | chr1.3:76687396-76687415 | MS.gene056282:intron | 20.0% |
!! | AATATGTCAATAGGAATAAA+GGG | - | chr1.3:76688110-76688129 | None:intergenic | 20.0% |
!! | AATATTATAAGATAGGAACT+GGG | + | chr1.3:76687397-76687416 | MS.gene056282:intron | 20.0% |
!! | ACATATGTTTCTTAATCAAA+AGG | + | chr1.3:76690262-76690281 | MS.gene056282:intron | 20.0% |
!! | AGAACATTCAATAAGAATAT+CGG | - | chr1.3:76685496-76685515 | None:intergenic | 20.0% |
!! | AGATACAACTGTTAATAATA+TGG | - | chr1.3:76690672-76690691 | None:intergenic | 20.0% |
!! | ATAAAAAAAGAAAACTACAC+AGG | - | chr1.3:76690405-76690424 | None:intergenic | 20.0% |
!! | ATACAACTGTTAATAATATG+GGG | - | chr1.3:76690670-76690689 | None:intergenic | 20.0% |
!! | ATAGTGATTAATATGTCAAT+AGG | - | chr1.3:76688119-76688138 | None:intergenic | 20.0% |
!! | ATATAAAAGCAGTTAATCAT+TGG | + | chr1.3:76689888-76689907 | MS.gene056282:intron | 20.0% |
!! | ATATTATTAACAGTTGTATC+TGG | + | chr1.3:76690671-76690690 | MS.gene056282:intron | 20.0% |
!! | ATCAATAGATATATATGTAG+AGG | + | chr1.3:76688739-76688758 | MS.gene056282:intron | 20.0% |
!! | CTTTATTAAAACTATTGATC+AGG | + | chr1.3:76685922-76685941 | MS.gene056282:intron | 20.0% |
!! | GATACAACTGTTAATAATAT+GGG | - | chr1.3:76690671-76690690 | None:intergenic | 20.0% |
!! | GGGTAAGAAATAAAAATTAT+CGG | - | chr1.3:76689002-76689021 | None:intergenic | 20.0% |
!! | TAAAAAAAGAAAACTACACA+GGG | - | chr1.3:76690404-76690423 | None:intergenic | 20.0% |
!! | TAAAAGTTCTTCCTTTAAAT+TGG | + | chr1.3:76686713-76686732 | MS.gene056282:intron | 20.0% |
!! | TAATATGTCAATAGGAATAA+AGG | - | chr1.3:76688111-76688130 | None:intergenic | 20.0% |
!! | TACTCATATTACATAAAGTA+TGG | - | chr1.3:76688298-76688317 | None:intergenic | 20.0% |
!! | TACTTTATGTAATATGAGTA+AGG | + | chr1.3:76688298-76688317 | MS.gene056282:intron | 20.0% |
!! | TATCTTCTTTATCATTATCT+GGG | - | chr1.3:76686299-76686318 | None:intergenic | 20.0% |
!! | TCTTAATTAACTCAAAAGAT+AGG | - | chr1.3:76685714-76685733 | None:intergenic | 20.0% |
!! | TTAAATCTGCTTAGAAAATA+GGG | + | chr1.3:76686523-76686542 | MS.gene056282:intron | 20.0% |
!! | TTATCTTCTTTATCATTATC+TGG | - | chr1.3:76686300-76686319 | None:intergenic | 20.0% |
!! | TTTAATGTAGAACTAGTATT+TGG | + | chr1.3:76688775-76688794 | MS.gene056282:intron | 20.0% |
!!! | ATTATTTCTTTACCATCATT+TGG | - | chr1.3:76689574-76689593 | None:intergenic | 20.0% |
!!! | GACTTCATTATTTTGTTTAA+TGG | + | chr1.3:76688896-76688915 | MS.gene056282:intron | 20.0% |
!!! | TCATTTTGACTGTAAAAAAA+AGG | + | chr1.3:76687788-76687807 | MS.gene056282:intron | 20.0% |
!!! | TTGATTCTTCATTTTTCTTT+GGG | + | chr1.3:76688654-76688673 | MS.gene056282:intron | 20.0% |
!!! | TTTAACTTGAAATTTTGTAG+TGG | + | chr1.3:76686436-76686455 | MS.gene056282:intron | 20.0% |
!!! | TTTGATTCTTCATTTTTCTT+TGG | + | chr1.3:76688653-76688672 | MS.gene056282:intron | 20.0% |
!!! | TTTTCCTAATAAATTACAGT+TGG | - | chr1.3:76689215-76689234 | None:intergenic | 20.0% |
! | AAACCAAAATTACCAGAATA+AGG | - | chr1.3:76688527-76688546 | None:intergenic | 25.0% |
! | AAATTAGACCTCTTAATCTA+AGG | - | chr1.3:76688245-76688264 | None:intergenic | 25.0% |
! | AACAAACAGACACATAATTT+AGG | - | chr1.3:76685379-76685398 | None:intergenic | 25.0% |
! | AACCAAAATTACCAGAATAA+GGG | - | chr1.3:76688526-76688545 | None:intergenic | 25.0% |
! | AATAAATGTCTCATAATGCT+TGG | + | chr1.3:76688606-76688625 | MS.gene056282:intron | 25.0% |
! | AGATTACCAAATTAAGGAAA+AGG | - | chr1.3:76688471-76688490 | None:intergenic | 25.0% |
! | ATTGACAATCTCTTGATATT+TGG | - | chr1.3:76685577-76685596 | None:intergenic | 25.0% |
! | CAATTCAATAACCAAATACT+TGG | - | chr1.3:76686690-76686709 | None:intergenic | 25.0% |
! | CTTAAATCTGCTTAGAAAAT+AGG | + | chr1.3:76686522-76686541 | MS.gene056282:intron | 25.0% |
! | GATGTGTAATATCTATACAA+CGG | - | chr1.3:76689667-76689686 | None:intergenic | 25.0% |
! | GATTACCAAATTAAGGAAAA+GGG | - | chr1.3:76688470-76688489 | None:intergenic | 25.0% |
! | TAAAGAAAAATACAGGAGAA+TGG | - | chr1.3:76689288-76689307 | None:intergenic | 25.0% |
! | TAAATCTGCTTAGAAAATAG+GGG | + | chr1.3:76686524-76686543 | MS.gene056282:intron | 25.0% |
! | TAACAGCTAATGCATTATTT+AGG | - | chr1.3:76686150-76686169 | None:intergenic | 25.0% |
! | TAATTAACTCAAAAGATAGG+AGG | - | chr1.3:76685711-76685730 | None:intergenic | 25.0% |
! | TACAAATCTTGATTTATGCA+GGG | + | chr1.3:76688331-76688350 | MS.gene056282:intron | 25.0% |
! | TACAACTGTTAATAATATGG+GGG | - | chr1.3:76690669-76690688 | None:intergenic | 25.0% |
! | TCTTATTACCTTAGATTAAG+AGG | + | chr1.3:76688234-76688253 | MS.gene056282:intron | 25.0% |
! | TGCATTATTATGTGAGAATT+TGG | + | chr1.3:76689818-76689837 | MS.gene056282:intron | 25.0% |
! | TGGGAATTAAAAATGTGATA+AGG | + | chr1.3:76687416-76687435 | MS.gene056282:intron | 25.0% |
! | TGTACCAACTGTAATTTATT+AGG | + | chr1.3:76689208-76689227 | MS.gene056282:intron | 25.0% |
! | TGTCTTATCTCAATGAAATT+TGG | + | chr1.3:76686113-76686132 | MS.gene056282:intron | 25.0% |
! | TTACAAATCTTGATTTATGC+AGG | + | chr1.3:76688330-76688349 | MS.gene056282:intron | 25.0% |
! | TTATTAATGTCACAGAATAC+AGG | + | chr1.3:76685398-76685417 | MS.gene056282:intron | 25.0% |
! | TTGAAATTCTAGTAATCACA+AGG | + | chr1.3:76686562-76686581 | MS.gene056282:intron | 25.0% |
! | TTGACAATCTCTTGATATTT+GGG | - | chr1.3:76685576-76685595 | None:intergenic | 25.0% |
! | TTTATGTAATATGAGTAAGG+TGG | + | chr1.3:76688301-76688320 | MS.gene056282:intron | 25.0% |
! | TTTCTTATCCATCATCAATA+AGG | - | chr1.3:76687374-76687393 | None:intergenic | 25.0% |
!! | AATCCTCTAAAGAAAAATAC+AGG | - | chr1.3:76689295-76689314 | None:intergenic | 25.0% |
!! | ATGAATTTTGTCTTCTGTTT+TGG | + | chr1.3:76689592-76689611 | MS.gene056282:intron | 25.0% |
!! | TTCAATTCTCTTTCTTTTCT+TGG | + | chr1.3:76689971-76689990 | MS.gene056282:intron | 25.0% |
!!! | ACATTTTGCTTTTACTATAG+TGG | + | chr1.3:76686755-76686774 | MS.gene056282:intron | 25.0% |
!!! | ACTATTCTATTAGTTTGTTC+TGG | + | chr1.3:76686598-76686617 | MS.gene056282:intron | 25.0% |
!!! | CTATGATTGTGCTTATTTTA+TGG | - | chr1.3:76687496-76687515 | None:intergenic | 25.0% |
!!! | TACTAGTTCTACATTAAAGA+TGG | - | chr1.3:76688773-76688792 | None:intergenic | 25.0% |
!!! | TGATTCTTCATTTTTCTTTG+GGG | + | chr1.3:76688655-76688674 | MS.gene056282:intron | 25.0% |
AACTAATCCAACATGGTTTA+TGG | - | chr1.3:76689796-76689815 | None:intergenic | 30.0% | |
ACACTCTAATGATGTATCAT+TGG | + | chr1.3:76690295-76690314 | MS.gene056282:intron | 30.0% | |
ACAGTCAAAATGAAGAAGAA+AGG | - | chr1.3:76687781-76687800 | None:intergenic | 30.0% | |
ACCAAAATTACCAGAATAAG+GGG | - | chr1.3:76688525-76688544 | None:intergenic | 30.0% | |
ACTATTGATCAGGTATTTGA+AGG | + | chr1.3:76685932-76685951 | MS.gene056282:intron | 30.0% | |
AGAATGGTAAAAGCAGTAAA+AGG | - | chr1.3:76689272-76689291 | None:intergenic | 30.0% | |
AGAGAAAATTAGTAGATACC+AGG | - | chr1.3:76690585-76690604 | None:intergenic | 30.0% | |
AGATCTGTATACATATAACC+AGG | - | chr1.3:76689475-76689494 | None:intergenic | 30.0% | |
AGTTTCTACATAAGAGTTGT+CGG | - | chr1.3:76688155-76688174 | None:intergenic | 30.0% | |
ATTGTGATCTGTGTTTCATT+TGG | + | chr1.3:76687343-76687362 | MS.gene056282:intron | 30.0% | |
CAATCTCATACAATTCATCA+GGG | - | chr1.3:76690076-76690095 | None:intergenic | 30.0% | |
CAATGAAATTTGGATTATGC+AGG | + | chr1.3:76686123-76686142 | MS.gene056282:intron | 30.0% | |
CAGGGATCATATATATTTCA+TGG | - | chr1.3:76690058-76690077 | None:intergenic | 30.0% | |
CAGTCAAAATGAAGAAGAAA+GGG | - | chr1.3:76687780-76687799 | None:intergenic | 30.0% | |
CATGGTTAGAATTGGAATTT+GGG | - | chr1.3:76689551-76689570 | None:intergenic | 30.0% | |
GAGATTGTCAATATTCGTTT+AGG | + | chr1.3:76685585-76685604 | MS.gene056282:CDS | 30.0% | |
GTGATAATACGTTCAATTGT+AGG | - | chr1.3:76689078-76689097 | None:intergenic | 30.0% | |
GTTTCATTAATACCACTTCA+AGG | - | chr1.3:76690639-76690658 | None:intergenic | 30.0% | |
TAATGCTTAGAATGTTTACC+AGG | - | chr1.3:76690120-76690139 | None:intergenic | 30.0% | |
TATAAGCAATATCACAAGTG+AGG | - | chr1.3:76688199-76688218 | None:intergenic | 30.0% | |
TGATCTTACCGGATATATTA+CGG | + | chr1.3:76689694-76689713 | MS.gene056282:CDS | 30.0% | |
TTCAACAATCAATACTGGTA+AGG | - | chr1.3:76688567-76688586 | None:intergenic | 30.0% | |
TTCTTTATCATTATCTGGGA+CGG | - | chr1.3:76686295-76686314 | None:intergenic | 30.0% | |
TTGCATGTCATCTTGATTAA+TGG | + | chr1.3:76686380-76686399 | MS.gene056282:intron | 30.0% | |
! | AGTGTGACTAAATTTTACGT+TGG | + | chr1.3:76685534-76685553 | MS.gene056282:intron | 30.0% |
! | CTCTTGAATTGTATGACTTT+TGG | + | chr1.3:76687314-76687333 | MS.gene056282:intron | 30.0% |
! | TCTCCTGTATTTTTCTTTAG+AGG | + | chr1.3:76689289-76689308 | MS.gene056282:intron | 30.0% |
! | TGGATTTTCCTTATTGATGA+TGG | + | chr1.3:76687363-76687382 | MS.gene056282:intron | 30.0% |
! | TTGTGTTATATAGTGGGATT+CGG | + | chr1.3:76689912-76689931 | MS.gene056282:intron | 30.0% |
!! | ATTCTATTAGTTTGTTCTGG+AGG | + | chr1.3:76686601-76686620 | MS.gene056282:intron | 30.0% |
!! | ATTGGCTTGTGTTATATAGT+GGG | + | chr1.3:76689906-76689925 | MS.gene056282:intron | 30.0% |
!! | GGTATTCTCTCTGAAAATTT+TGG | + | chr1.3:76689933-76689952 | MS.gene056282:intron | 30.0% |
!! | TACCAGTATTGATTGTTGAA+TGG | + | chr1.3:76688567-76688586 | MS.gene056282:intron | 30.0% |
!! | TGTCTTCTGTTTTGGATAAA+AGG | + | chr1.3:76689600-76689619 | MS.gene056282:intron | 30.0% |
!! | TTCATTTTTCTTTGGGGATT+GGG | + | chr1.3:76688661-76688680 | MS.gene056282:intron | 30.0% |
!! | TTCTATTAGTTTGTTCTGGA+GGG | + | chr1.3:76686602-76686621 | MS.gene056282:intron | 30.0% |
!!! | TCCTTTAAATTGGTTTTGCT+CGG | + | chr1.3:76686723-76686742 | MS.gene056282:intron | 30.0% |
AAAACACATAATTGAGCCGA+TGG | + | chr1.3:76686231-76686250 | MS.gene056282:intron | 35.0% | |
AAATCTTGATTTATGCAGGG+AGG | + | chr1.3:76688334-76688353 | MS.gene056282:intron | 35.0% | |
AAGTAAGCCTCAGGTAAAAT+TGG | - | chr1.3:76686910-76686929 | None:intergenic | 35.0% | |
AATACTTGGCTAAATTGCAG+AGG | - | chr1.3:76686676-76686695 | None:intergenic | 35.0% | |
ACATGTAAACCTAGAAACTG+TGG | + | chr1.3:76686489-76686508 | MS.gene056282:intron | 35.0% | |
ACGAATACCATGAGTTATCA+AGG | - | chr1.3:76685336-76685355 | None:intergenic | 35.0% | |
ACTGCATGTTTGTTTATGTC+TGG | + | chr1.3:76686967-76686986 | MS.gene056282:intron | 35.0% | |
ACTTTCTCAAGAATGACCAA+TGG | - | chr1.3:76685445-76685464 | None:intergenic | 35.0% | |
AGCCATTCAACAATCAATAC+TGG | - | chr1.3:76688572-76688591 | None:intergenic | 35.0% | |
ATGAATGCCATAAACCATGT+TGG | + | chr1.3:76689786-76689805 | MS.gene056282:intron | 35.0% | |
ATGCTTGGTCGGATATTTAA+CGG | + | chr1.3:76686856-76686875 | MS.gene056282:CDS | 35.0% | |
ATGTTCTTCCATCACTATCT+CGG | + | chr1.3:76690186-76690205 | MS.gene056282:CDS | 35.0% | |
ATTCTAACCATGCCAAATGA+TGG | + | chr1.3:76689559-76689578 | MS.gene056282:CDS | 35.0% | |
CACAATCATAGTTGTCAAAG+CGG | + | chr1.3:76687505-76687524 | MS.gene056282:intron | 35.0% | |
CCAAAATTACCAGAATAAGG+GGG | - | chr1.3:76688524-76688543 | None:intergenic | 35.0% | |
CCAATCTCATACAATTCATC+AGG | - | chr1.3:76690077-76690096 | None:intergenic | 35.0% | |
CCTGATGAATTGTATGAGAT+TGG | + | chr1.3:76690074-76690093 | MS.gene056282:intron | 35.0% | |
CTACGGATATAAACAAGAGA+GGG | - | chr1.3:76686809-76686828 | None:intergenic | 35.0% | |
CTAGAGACTGGAATATATTG+CGG | - | chr1.3:76690749-76690768 | None:intergenic | 35.0% | |
CTGCAATTTAGCCAAGTATT+TGG | + | chr1.3:76686676-76686695 | MS.gene056282:intron | 35.0% | |
CTGTATGCAAATTATGCCAT+TGG | + | chr1.3:76690502-76690521 | MS.gene056282:CDS | 35.0% | |
CTGTGCAGCAATTTCATTAT+GGG | - | chr1.3:76687163-76687182 | None:intergenic | 35.0% | |
GAAGTCTGATAATCTTCTTG+AGG | + | chr1.3:76687218-76687237 | MS.gene056282:CDS | 35.0% | |
GATTTCAAAGTTCTGTCAAG+TGG | + | chr1.3:76690236-76690255 | MS.gene056282:intron | 35.0% | |
GCATGGTTAGAATTGGAATT+TGG | - | chr1.3:76689552-76689571 | None:intergenic | 35.0% | |
GGAAGAAGTGAAAGATTGAT+TGG | - | chr1.3:76687759-76687778 | None:intergenic | 35.0% | |
GTAATATATCCGGTAAGATC+AGG | - | chr1.3:76689695-76689714 | None:intergenic | 35.0% | |
GTATACGATGAAGAAGTTCA+CGG | - | chr1.3:76690803-76690822 | None:intergenic | 35.0% | |
GTCATGAATTCTATTGCTAG+AGG | + | chr1.3:76687102-76687121 | MS.gene056282:CDS | 35.0% | |
GTTAAAAACTCCTGTATCAC+TGG | + | chr1.3:76686831-76686850 | MS.gene056282:CDS | 35.0% | |
TAGAGACTGGAATATATTGC+GGG | - | chr1.3:76690748-76690767 | None:intergenic | 35.0% | |
TAGTGAAATTGTCCTTGAAG+TGG | + | chr1.3:76690624-76690643 | MS.gene056282:intron | 35.0% | |
TATACGATGAAGAAGTTCAC+GGG | - | chr1.3:76690802-76690821 | None:intergenic | 35.0% | |
TCATTTGGCATGGTTAGAAT+TGG | - | chr1.3:76689559-76689578 | None:intergenic | 35.0% | |
TCTGGAAAACCAATTGACAA+TGG | + | chr1.3:76686880-76686899 | MS.gene056282:CDS | 35.0% | |
TCTGTGCAGCAATTTCATTA+TGG | - | chr1.3:76687164-76687183 | None:intergenic | 35.0% | |
TCTTACTACTGCTGAATATC+TGG | + | chr1.3:76689110-76689129 | MS.gene056282:CDS | 35.0% | |
TCTTTAATTCCCCCTTATTC+TGG | + | chr1.3:76688512-76688531 | MS.gene056282:intron | 35.0% | |
TGCAAATTATGCCATTGGAA+AGG | + | chr1.3:76690507-76690526 | MS.gene056282:CDS | 35.0% | |
TGTGCAGCAATTTCATTATG+GGG | - | chr1.3:76687162-76687181 | None:intergenic | 35.0% | |
TTAAAAGGATAGCCAACCAT+CGG | - | chr1.3:76686250-76686269 | None:intergenic | 35.0% | |
TTCTTTACCATCATTTGGCA+TGG | - | chr1.3:76689569-76689588 | None:intergenic | 35.0% | |
TTTCAGTTTCCACAGTTTCT+AGG | - | chr1.3:76686501-76686520 | None:intergenic | 35.0% | |
! | AATTTCTGGACAAGTTTGAG+AGG | + | chr1.3:76690694-76690713 | MS.gene056282:CDS | 35.0% |
! | AATTTTACCTGAGGCTTACT+TGG | + | chr1.3:76686909-76686928 | MS.gene056282:CDS | 35.0% |
! | ACAGGAGTTTTTAACACCTA+CGG | - | chr1.3:76686826-76686845 | None:intergenic | 35.0% |
! | ACAGTTGTATCTGGAATTTC+TGG | + | chr1.3:76690680-76690699 | MS.gene056282:intron | 35.0% |
! | AGAACAGAGATGAGATTTTG+TGG | + | chr1.3:76687822-76687841 | MS.gene056282:intron | 35.0% |
! | AGGTATTTGAAGGTACATCT+GGG | + | chr1.3:76685942-76685961 | MS.gene056282:intron | 35.0% |
! | AGTGACCCTTTTCCTTAATT+TGG | + | chr1.3:76688462-76688481 | MS.gene056282:CDS | 35.0% |
! | AGTGATGGAAGAACATTGAT+TGG | - | chr1.3:76690182-76690201 | None:intergenic | 35.0% |
! | ATGGAAGAACATTGATTGGT+GGG | - | chr1.3:76690178-76690197 | None:intergenic | 35.0% |
! | ATGTCTGCACAATTGCTATT+GGG | + | chr1.3:76689032-76689051 | MS.gene056282:intron | 35.0% |
! | TTGCTATTGGGATTTACTGT+AGG | + | chr1.3:76689044-76689063 | MS.gene056282:intron | 35.0% |
!! | CATTGGCTTGTGTTATATAG+TGG | + | chr1.3:76689905-76689924 | MS.gene056282:intron | 35.0% |
!! | CTTCATTTTTCTTTGGGGAT+TGG | + | chr1.3:76688660-76688679 | MS.gene056282:intron | 35.0% |
!! | TCATTTTTCTTTGGGGATTG+GGG | + | chr1.3:76688662-76688681 | MS.gene056282:intron | 35.0% |
!! | TCTATTAGTTTGTTCTGGAG+GGG | + | chr1.3:76686603-76686622 | MS.gene056282:intron | 35.0% |
!! | TGGTTTGACTACTTTTGCAA+AGG | - | chr1.3:76687476-76687495 | None:intergenic | 35.0% |
!! | TTTGACTACTTTTGCAAAGG+TGG | - | chr1.3:76687473-76687492 | None:intergenic | 35.0% |
AAGAATGCTACTCAGAAGCT+CGG | - | chr1.3:76685779-76685798 | None:intergenic | 40.0% | |
AATAAAGCAGACAGTGATGG+AGG | - | chr1.3:76685812-76685831 | None:intergenic | 40.0% | |
AATTTCATTATGGGGGAGAC+CGG | - | chr1.3:76687154-76687173 | None:intergenic | 40.0% | |
ATACGATGAAGAAGTTCACG+GGG | - | chr1.3:76690801-76690820 | None:intergenic | 40.0% | |
ATCTGCTTAGAAAATAGGGG+AGG | + | chr1.3:76686527-76686546 | MS.gene056282:intron | 40.0% | |
ATGATGGTTATGCATGCTGA+AGG | - | chr1.3:76685679-76685698 | None:intergenic | 40.0% | |
ATGCAGCAACTAATCCAACA+TGG | - | chr1.3:76689803-76689822 | None:intergenic | 40.0% | |
CAGTTGCATAATAGACAGGT+GGG | + | chr1.3:76689740-76689759 | MS.gene056282:intron | 40.0% | |
CATGTCTGCACAATTGCTAT+TGG | + | chr1.3:76689031-76689050 | MS.gene056282:intron | 40.0% | |
CCTACGGATATAAACAAGAG+AGG | - | chr1.3:76686810-76686829 | None:intergenic | 40.0% | |
CTTACCGGATATATTACGGA+GGG | + | chr1.3:76689698-76689717 | MS.gene056282:CDS | 40.0% | |
GAATATCTGGCGTATGAATG+TGG | + | chr1.3:76689123-76689142 | MS.gene056282:CDS | 40.0% | |
GAGGCTTACTTGGATATATC+AGG | + | chr1.3:76686919-76686938 | MS.gene056282:CDS | 40.0% | |
GATATATCCAAGTAAGCCTC+AGG | - | chr1.3:76686919-76686938 | None:intergenic | 40.0% | |
GATTGGAGATCTAGAGATCT+AGG | - | chr1.3:76687742-76687761 | None:intergenic | 40.0% | |
GCAACAATTTATGAACGTGC+CGG | + | chr1.3:76689496-76689515 | MS.gene056282:CDS | 40.0% | |
GCCGAGCAAAACCAATTTAA+AGG | - | chr1.3:76686727-76686746 | None:intergenic | 40.0% | |
GCTTAGGGGATAGTTACAAT+TGG | - | chr1.3:76686325-76686344 | None:intergenic | 40.0% | |
GGTAGCAGTAGCAGTTTAAA+AGG | - | chr1.3:76686265-76686284 | None:intergenic | 40.0% | |
GGTCATTCTTGAGAAAGTGA+AGG | + | chr1.3:76685447-76685466 | MS.gene056282:CDS | 40.0% | |
GTAAAACTGGTCAAGAGTCT+TGG | - | chr1.3:76690829-76690848 | None:intergenic | 40.0% | |
GTCAATATTCGTTTAGGCGA+TGG | + | chr1.3:76685591-76685610 | MS.gene056282:CDS | 40.0% | |
GTGAATAAAGCAGACAGTGA+TGG | - | chr1.3:76685815-76685834 | None:intergenic | 40.0% | |
GTGCAGACATGTAAGAAACA+GGG | - | chr1.3:76689022-76689041 | None:intergenic | 40.0% | |
GTGCAGCAATTTCATTATGG+GGG | - | chr1.3:76687161-76687180 | None:intergenic | 40.0% | |
TAAGCCTCAGGTAAAATTGG+CGG | - | chr1.3:76686907-76686926 | None:intergenic | 40.0% | |
TACAATCAGTCTAAGTGACC+TGG | + | chr1.3:76690099-76690118 | MS.gene056282:intron | 40.0% | |
TACCTCTCCAGTAAACTGTA+CGG | - | chr1.3:76685987-76686006 | None:intergenic | 40.0% | |
TAGGCAGTTGCATAATAGAC+AGG | + | chr1.3:76689736-76689755 | MS.gene056282:CDS | 40.0% | |
TATGTATACACACACCCACA+GGG | - | chr1.3:76685220-76685239 | None:intergenic | 40.0% | |
TCCCATAGCTGCAAAAACAA+TGG | - | chr1.3:76688380-76688399 | None:intergenic | 40.0% | |
TCTTACCGGATATATTACGG+AGG | + | chr1.3:76689697-76689716 | MS.gene056282:CDS | 40.0% | |
TGTGCAGACATGTAAGAAAC+AGG | - | chr1.3:76689023-76689042 | None:intergenic | 40.0% | |
TTACCGGATATATTACGGAG+GGG | + | chr1.3:76689699-76689718 | MS.gene056282:CDS | 40.0% | |
TTCATCAACCGAGATAGTGA+TGG | - | chr1.3:76690197-76690216 | None:intergenic | 40.0% | |
TTTACGACCGTACAGTTTAC+TGG | + | chr1.3:76685977-76685996 | MS.gene056282:CDS | 40.0% | |
! | ATTATCTGGGACGGTTTAGT+AGG | - | chr1.3:76686286-76686305 | None:intergenic | 40.0% |
! | CAATCTGCCTTGATAACTCA+TGG | + | chr1.3:76685326-76685345 | MS.gene056282:intron | 40.0% |
! | CAGGTATTTGAAGGTACATC+TGG | + | chr1.3:76685941-76685960 | MS.gene056282:intron | 40.0% |
! | CCCCCTTATTCTGGTAATTT+TGG | + | chr1.3:76688521-76688540 | MS.gene056282:intron | 40.0% |
! | CCTCTCTTGTTTATATCCGT+AGG | + | chr1.3:76686807-76686826 | MS.gene056282:intron | 40.0% |
! | GATGGAAGAACATTGATTGG+TGG | - | chr1.3:76690179-76690198 | None:intergenic | 40.0% |
! | GCATGTTAATTTTCCCCTGT+GGG | + | chr1.3:76685203-76685222 | MS.gene056282:intron | 40.0% |
!! | ACGTGTCTTATTGGTTTACG+TGG | + | chr1.3:76685181-76685200 | MS.gene056282:intron | 40.0% |
!! | ACTTCGCATGTGTTTGGTTT+TGG | - | chr1.3:76688809-76688828 | None:intergenic | 40.0% |
!! | AGAAGAAGCACTTTCATCTG+AGG | + | chr1.3:76690558-76690577 | MS.gene056282:CDS | 40.0% |
!! | ATCACTATCTCGGTTGATGA+AGG | + | chr1.3:76690196-76690215 | MS.gene056282:CDS | 40.0% |
!! | CATTTTTCTTTGGGGATTGG+GGG | + | chr1.3:76688663-76688682 | MS.gene056282:intron | 40.0% |
!! | CTATTAGTTTGTTCTGGAGG+GGG | + | chr1.3:76686604-76686623 | MS.gene056282:intron | 40.0% |
!!! | GCCATTGTTTTTGCAGCTAT+GGG | + | chr1.3:76688376-76688395 | MS.gene056282:CDS | 40.0% |
!!! | GTTTTTCAAGCGTGACTTTG+AGG | + | chr1.3:76688420-76688439 | MS.gene056282:CDS | 40.0% |
!!! | TGCCATTGTTTTTGCAGCTA+TGG | + | chr1.3:76688375-76688394 | MS.gene056282:CDS | 40.0% |
AATGCTAGCGACAATGACGA+CGG | + | chr1.3:76685136-76685155 | MS.gene056282:CDS | 45.0% | |
AATTGCAGAGGAACAGAGGA+TGG | - | chr1.3:76686664-76686683 | None:intergenic | 45.0% | |
ACAGAATACAGGACTGTGTC+TGG | + | chr1.3:76685409-76685428 | MS.gene056282:intron | 45.0% | |
ACATGCAACACAGTCTGAAG+GGG | - | chr1.3:76686368-76686387 | None:intergenic | 45.0% | |
ACCAAACACATGCGAAGTGT+AGG | + | chr1.3:76688811-76688830 | MS.gene056282:intron | 45.0% | |
AGGCAAAAGCGGAACAAAAG+CGG | - | chr1.3:76687936-76687955 | None:intergenic | 45.0% | |
AGGGGCAGATATACATCGAT+AGG | + | chr1.3:76689717-76689736 | MS.gene056282:CDS | 45.0% | |
ATCTTGCATGGACCTTACTC+CGG | + | chr1.3:76690769-76690788 | MS.gene056282:CDS | 45.0% | |
ATGTATACACACACCCACAG+GGG | - | chr1.3:76685219-76685238 | None:intergenic | 45.0% | |
ATTGCAGAGGAACAGAGGAT+GGG | - | chr1.3:76686663-76686682 | None:intergenic | 45.0% | |
CAAACAAGAAGAGACCTGGT+TGG | - | chr1.3:76690379-76690398 | None:intergenic | 45.0% | |
CAACAACAGCTTTCATTGCC+TGG | - | chr1.3:76690537-76690556 | None:intergenic | 45.0% | |
CACATAATTGAGCCGATGGT+TGG | + | chr1.3:76686235-76686254 | MS.gene056282:intron | 45.0% | |
CAGGCAATGAAAGCTGTTGT+TGG | + | chr1.3:76690535-76690554 | MS.gene056282:CDS | 45.0% | |
CATCCAACTCCTGATCTTAC+CGG | + | chr1.3:76689683-76689702 | MS.gene056282:CDS | 45.0% | |
CCAAACACATGCGAAGTGTA+GGG | + | chr1.3:76688812-76688831 | MS.gene056282:intron | 45.0% | |
CTATGTATACACACACCCAC+AGG | - | chr1.3:76685221-76685240 | None:intergenic | 45.0% | |
CTCAAGAATGACCAATGGTC+CGG | - | chr1.3:76685440-76685459 | None:intergenic | 45.0% | |
GACATGCAACACAGTCTGAA+GGG | - | chr1.3:76686369-76686388 | None:intergenic | 45.0% | |
GCAGTAGTAAGAGCAATACG+AGG | - | chr1.3:76689102-76689121 | None:intergenic | 45.0% | |
GCAGTTGCATAATAGACAGG+TGG | + | chr1.3:76689739-76689758 | MS.gene056282:intron | 45.0% | |
GCTAAATTGCAGAGGAACAG+AGG | - | chr1.3:76686668-76686687 | None:intergenic | 45.0% | |
GGAACAAACAAGAAGAGACC+TGG | - | chr1.3:76690383-76690402 | None:intergenic | 45.0% | |
GGAATGGGTACGTGTCTTAT+TGG | + | chr1.3:76685172-76685191 | MS.gene056282:intron | 45.0% | |
GGTCGGATATTTAACGGTTC+TGG | + | chr1.3:76686862-76686881 | MS.gene056282:CDS | 45.0% | |
GTGCTCTCTGTTGTCAATAG+CGG | - | chr1.3:76688034-76688053 | None:intergenic | 45.0% | |
TACGATGAAGAAGTTCACGG+GGG | - | chr1.3:76690800-76690819 | None:intergenic | 45.0% | |
TACGTTGGTCAACTGCATCA+GGG | + | chr1.3:76685549-76685568 | MS.gene056282:intron | 45.0% | |
TAGGAGGCAAGTACAGATGA+TGG | - | chr1.3:76685695-76685714 | None:intergenic | 45.0% | |
TAGTTGTCAAAGCGGAAACG+CGG | + | chr1.3:76687513-76687532 | MS.gene056282:intron | 45.0% | |
TATCACTGGACATGCTTGGT+CGG | + | chr1.3:76686845-76686864 | MS.gene056282:CDS | 45.0% | |
TATCCGGTAAGATCAGGAGT+TGG | - | chr1.3:76689689-76689708 | None:intergenic | 45.0% | |
TCATTCTGATGTGTCCAACC+AGG | + | chr1.3:76690362-76690381 | MS.gene056282:CDS | 45.0% | |
TCCAGTCTCTAGATCTTGCA+TGG | + | chr1.3:76690757-76690776 | MS.gene056282:CDS | 45.0% | |
TCCAGTCTGTATCATCTCCT+CGG | - | chr1.3:76687067-76687086 | None:intergenic | 45.0% | |
TCCATGCAAGATCTAGAGAC+TGG | - | chr1.3:76690761-76690780 | None:intergenic | 45.0% | |
TCTTGATTTATGCAGGGAGG+AGG | + | chr1.3:76688337-76688356 | MS.gene056282:intron | 45.0% | |
TGACATGCAACACAGTCTGA+AGG | - | chr1.3:76686370-76686389 | None:intergenic | 45.0% | |
TGCAGCTATGGGAGTTAACA+TGG | + | chr1.3:76688387-76688406 | MS.gene056282:CDS | 45.0% | |
TTACGTTGGTCAACTGCATC+AGG | + | chr1.3:76685548-76685567 | MS.gene056282:intron | 45.0% | |
TTATGCTGATGCTCTTCGTG+AGG | + | chr1.3:76689182-76689201 | MS.gene056282:CDS | 45.0% | |
TTGTCAATAGCGGTCTAACG+CGG | - | chr1.3:76688024-76688043 | None:intergenic | 45.0% | |
TTTACGCCCCTCAATTCTTC+CGG | - | chr1.3:76689518-76689537 | None:intergenic | 45.0% | |
! | AAGCGTGACTTTGAGGAGAA+CGG | + | chr1.3:76688427-76688446 | MS.gene056282:CDS | 45.0% |
! | AAGGGGGATAACAGCAGTTT+TGG | - | chr1.3:76686351-76686370 | None:intergenic | 45.0% |
! | ATCCCTCTATTTTCAGCTGC+CGG | + | chr1.3:76687132-76687151 | MS.gene056282:CDS | 45.0% |
! | ATTGGCGGACCATTGTCAAT+TGG | - | chr1.3:76686892-76686911 | None:intergenic | 45.0% |
! | GAATATATTGCGGGTGTCGT+AGG | - | chr1.3:76690739-76690758 | None:intergenic | 45.0% |
! | GGCATGTTAATTTTCCCCTG+TGG | + | chr1.3:76685202-76685221 | MS.gene056282:intron | 45.0% |
! | TGATAAGGTTACAGCGCTGA+AGG | + | chr1.3:76687431-76687450 | MS.gene056282:intron | 45.0% |
!! | ACAGCAGTTTTGGCATGCTT+AGG | - | chr1.3:76686341-76686360 | None:intergenic | 45.0% |
!! | AGCAGTTTTGGCATGCTTAG+GGG | - | chr1.3:76686339-76686358 | None:intergenic | 45.0% |
!! | CAGCAGTTTTGGCATGCTTA+GGG | - | chr1.3:76686340-76686359 | None:intergenic | 45.0% |
!!! | ATTATAATTTTTTTAATAAG+GGG | - | chr1.3:76688969-76688988 | None:intergenic | 5.0% |
!!! | CATTATAATTTTTTTAATAA+GGG | - | chr1.3:76688970-76688989 | None:intergenic | 5.0% |
!!! | TCATTATAATTTTTTTAATA+AGG | - | chr1.3:76688971-76688990 | None:intergenic | 5.0% |
AACGTGCCGGAAGAATTGAG+GGG | + | chr1.3:76689509-76689528 | MS.gene056282:CDS | 50.0% | |
AACTGGTCAAGAGTCTTGGC+TGG | - | chr1.3:76690825-76690844 | None:intergenic | 50.0% | |
AGACCGGCAGCTGAAAATAG+AGG | - | chr1.3:76687138-76687157 | None:intergenic | 50.0% | |
AGAGGGACAGATGAAGTCAG+AGG | - | chr1.3:76686792-76686811 | None:intergenic | 50.0% | |
AGCACTTTCATCTGAGGACC+TGG | + | chr1.3:76690564-76690583 | MS.gene056282:CDS | 50.0% | |
CAGCATCTCGGCTGTAAAAC+TGG | - | chr1.3:76690842-76690861 | None:intergenic | 50.0% | |
CATGCAACACAGTCTGAAGG+GGG | - | chr1.3:76686367-76686386 | None:intergenic | 50.0% | |
CCAAGCATGTCCAGTGATAC+AGG | - | chr1.3:76686844-76686863 | None:intergenic | 50.0% | |
CCAGTCTGTATCATCTCCTC+GGG | - | chr1.3:76687066-76687085 | None:intergenic | 50.0% | |
CCCTACACTTCGCATGTGTT+TGG | - | chr1.3:76688815-76688834 | None:intergenic | 50.0% | |
CCTGTATCACTGGACATGCT+TGG | + | chr1.3:76686841-76686860 | MS.gene056282:CDS | 50.0% | |
CGGGATAGGTTCTCTCACTA+GGG | - | chr1.3:76687047-76687066 | None:intergenic | 50.0% | |
CGTACCCATTCCTATCTCCA+AGG | - | chr1.3:76685164-76685183 | None:intergenic | 50.0% | |
CTCAGAAGCTCGGAACACTT+TGG | - | chr1.3:76685769-76685788 | None:intergenic | 50.0% | |
CTGCCCCTCCGTAATATATC+CGG | - | chr1.3:76689705-76689724 | None:intergenic | 50.0% | |
CTGTATCATCTCCTCGGGAT+AGG | - | chr1.3:76687061-76687080 | None:intergenic | 50.0% | |
GAACGTGCCGGAAGAATTGA+GGG | + | chr1.3:76689508-76689527 | MS.gene056282:CDS | 50.0% | |
GAAGTTCACGGGGGAAAATC+CGG | - | chr1.3:76690791-76690810 | None:intergenic | 50.0% | |
GACCGGCAGCTGAAAATAGA+GGG | - | chr1.3:76687137-76687156 | None:intergenic | 50.0% | |
GACCGTACAGTTTACTGGAG+AGG | + | chr1.3:76685982-76686001 | MS.gene056282:CDS | 50.0% | |
GCACAGATTTGTCGTCAAGC+TGG | + | chr1.3:76687177-76687196 | MS.gene056282:CDS | 50.0% | |
GGACAAGTTCTCGAGGTTGA+TGG | + | chr1.3:76685627-76685646 | MS.gene056282:CDS | 50.0% | |
GGCAAAAGCGGAACAAAAGC+GGG | - | chr1.3:76687935-76687954 | None:intergenic | 50.0% | |
GGCACCTTGGAGATAGGAAT+GGG | + | chr1.3:76685157-76685176 | MS.gene056282:CDS | 50.0% | |
GGTTCTCTCACTAGGGTTGA+TGG | - | chr1.3:76687040-76687059 | None:intergenic | 50.0% | |
GTTTAGGCGATGGAACTACC+CGG | + | chr1.3:76685601-76685620 | MS.gene056282:CDS | 50.0% | |
TAGTGAGAGAACCTATCCCG+AGG | + | chr1.3:76687047-76687066 | MS.gene056282:CDS | 50.0% | |
TCGGGATAGGTTCTCTCACT+AGG | - | chr1.3:76687048-76687067 | None:intergenic | 50.0% | |
TGAACGTGCCGGAAGAATTG+AGG | + | chr1.3:76689507-76689526 | MS.gene056282:CDS | 50.0% | |
TGCCATTGGAAAGGATGTCC+AGG | + | chr1.3:76690516-76690535 | MS.gene056282:CDS | 50.0% | |
TGCCTGGACATCCTTTCCAA+TGG | - | chr1.3:76690521-76690540 | None:intergenic | 50.0% | |
TGGCGAAAAGGCTGTTGTTC+AGG | + | chr1.3:76685647-76685666 | MS.gene056282:CDS | 50.0% | |
TGGGGAGGGAATGACTAGAA+AGG | + | chr1.3:76690338-76690357 | MS.gene056282:CDS | 50.0% | |
! | ACCACTGCAGAGTGCTATTG+GGG | + | chr1.3:76690320-76690339 | MS.gene056282:intron | 50.0% |
! | CACCACTGCAGAGTGCTATT+GGG | + | chr1.3:76690319-76690338 | MS.gene056282:intron | 50.0% |
! | CAGTTTTACAGCCGAGATGC+TGG | + | chr1.3:76690840-76690859 | MS.gene056282:CDS | 50.0% |
! | CTTTGAGGAGAACGGCTCAA+TGG | + | chr1.3:76688435-76688454 | MS.gene056282:CDS | 50.0% |
! | GGAAGAATTGAGGGGCGTAA+AGG | + | chr1.3:76689517-76689536 | MS.gene056282:CDS | 50.0% |
! | TCACCACTGCAGAGTGCTAT+TGG | + | chr1.3:76690318-76690337 | MS.gene056282:intron | 50.0% |
! | TGGTCCGCCAATTTTACCTG+AGG | + | chr1.3:76686900-76686919 | MS.gene056282:CDS | 50.0% |
! | TTCTGGAGGGGGAATTTCTC+AGG | + | chr1.3:76686615-76686634 | MS.gene056282:intron | 50.0% |
!! | AGGATGGGCTAAATCTCGTG+AGG | - | chr1.3:76686648-76686667 | None:intergenic | 50.0% |
!! | GAGAGGAAGTTTGTTGCCCA+GGG | + | chr1.3:76690711-76690730 | MS.gene056282:CDS | 50.0% |
!! | TCTCGAGGTTGATGGCGAAA+AGG | + | chr1.3:76685635-76685654 | MS.gene056282:CDS | 50.0% |
!! | TGAGAGGAAGTTTGTTGCCC+AGG | + | chr1.3:76690710-76690729 | MS.gene056282:CDS | 50.0% |
ACGGGGGAAAATCCGGAGTA+AGG | - | chr1.3:76690784-76690803 | None:intergenic | 55.0% | |
AGTCGCGCGTTAGGCAAAAG+CGG | - | chr1.3:76687947-76687966 | None:intergenic | 55.0% | |
CCAGGAAGACGTGGTTATCC+TGG | + | chr1.3:76689454-76689473 | MS.gene056282:CDS | 55.0% | |
CCAGGATAACCACGTCTTCC+TGG | - | chr1.3:76689457-76689476 | None:intergenic | 55.0% | |
CCCGAGGAGATGATACAGAC+TGG | + | chr1.3:76687063-76687082 | MS.gene056282:CDS | 55.0% | |
CGGCACCTTGGAGATAGGAA+TGG | + | chr1.3:76685156-76685175 | MS.gene056282:CDS | 55.0% | |
CTCTGGCAGCAGATACCTGT+AGG | - | chr1.3:76689426-76689445 | None:intergenic | 55.0% | |
GAACAAAAGCGGGTCAACGC+GGG | - | chr1.3:76687925-76687944 | None:intergenic | 55.0% | |
GGAACAAAAGCGGGTCAACG+CGG | - | chr1.3:76687926-76687945 | None:intergenic | 55.0% | |
GGCAAAAAGCGGGTCAATGC+GGG | - | chr1.3:76687904-76687923 | None:intergenic | 55.0% | |
GGCCACCCCAAAAATTGACG+CGG | + | chr1.3:76687544-76687563 | MS.gene056282:intron | 55.0% | |
GGGACAGATGAAGTCAGAGG+TGG | - | chr1.3:76686789-76686808 | None:intergenic | 55.0% | |
GGGCAAAAAGCGGGTCAATG+CGG | - | chr1.3:76687905-76687924 | None:intergenic | 55.0% | |
GGGTCAATGCGGGCAAAAAG+CGG | - | chr1.3:76687894-76687913 | None:intergenic | 55.0% | |
GGTATCTGCTGCCAGAGAAG+AGG | + | chr1.3:76689429-76689448 | MS.gene056282:intron | 55.0% | |
GGTCAATGCGGGCAAAAAGC+GGG | - | chr1.3:76687893-76687912 | None:intergenic | 55.0% | |
TCCCCAATAGCACTCTGCAG+TGG | - | chr1.3:76690324-76690343 | None:intergenic | 55.0% | |
TCTTCCTGGCACCTCTTCTC+TGG | - | chr1.3:76689443-76689462 | None:intergenic | 55.0% | |
! | ACCGCGCCGCGTCAATTTTT+GGG | - | chr1.3:76687553-76687572 | None:intergenic | 55.0% |
! | ACTGCAGAGTGCTATTGGGG+AGG | + | chr1.3:76690323-76690342 | MS.gene056282:intron | 55.0% |
! | AGGACTGTGTCTGGAGTTGC+CGG | + | chr1.3:76685418-76685437 | MS.gene056282:CDS | 55.0% |
! | CTGCAGAGTGCTATTGGGGA+GGG | + | chr1.3:76690324-76690343 | MS.gene056282:intron | 55.0% |
! | CTTTTGCCTAACGCGCGACT+CGG | + | chr1.3:76687947-76687966 | MS.gene056282:intron | 55.0% |
! | TACCGCGCCGCGTCAATTTT+TGG | - | chr1.3:76687554-76687573 | None:intergenic | 55.0% |
AATTGACGCGGCGCGGTAAG+CGG | + | chr1.3:76687556-76687575 | MS.gene056282:intron | 60.0% | |
CCCCAAAAATTGACGCGGCG+CGG | + | chr1.3:76687549-76687568 | MS.gene056282:intron | 60.0% | |
CCTCGAGAACTTGTCCACGC+CGG | - | chr1.3:76685623-76685642 | None:intergenic | 60.0% | |
CGACAATGACGACGGCACCT+TGG | + | chr1.3:76685144-76685163 | MS.gene056282:CDS | 60.0% | |
CTCGAGAACTTGTCCACGCC+GGG | - | chr1.3:76685622-76685641 | None:intergenic | 60.0% | |
GACGACGGCACCTTGGAGAT+AGG | + | chr1.3:76685151-76685170 | MS.gene056282:CDS | 60.0% | |
GGCAAAAAGCGGGTCAACGC+GGG | - | chr1.3:76687883-76687902 | None:intergenic | 60.0% | |
GGGCAAAAAGCGGGTCAACG+CGG | - | chr1.3:76687884-76687903 | None:intergenic | 60.0% | |
GGGTCAACGCGGGCAAAAAG+CGG | - | chr1.3:76687873-76687892 | None:intergenic | 60.0% | |
GGTCAACGCGGGCAAAAAGC+GGG | - | chr1.3:76687872-76687891 | None:intergenic | 60.0% | |
! | CCGCGCCGCGTCAATTTTTG+GGG | - | chr1.3:76687552-76687571 | None:intergenic | 60.0% |
! | GCGGGCGCTTTTACATGACG+CGG | + | chr1.3:76687586-76687605 | MS.gene056282:intron | 60.0% |
! | GTCTGGAGTTGCCGGACCAT+TGG | + | chr1.3:76685426-76685445 | MS.gene056282:CDS | 60.0% |
!! | CGCCGCGTCAATTTTTGGGG+TGG | - | chr1.3:76687549-76687568 | None:intergenic | 60.0% |
!! | GAAGAGGTGCCAGGAAGACG+TGG | + | chr1.3:76689445-76689464 | MS.gene056282:CDS | 60.0% |
ATTGACGCGGCGCGGTAAGC+GGG | + | chr1.3:76687557-76687576 | MS.gene056282:intron | 65.0% | |
CCGGCGTGGACAAGTTCTCG+AGG | + | chr1.3:76685620-76685639 | MS.gene056282:CDS | 65.0% | |
GTCAAAGCGGAAACGCGGCG+CGG | + | chr1.3:76687518-76687537 | MS.gene056282:intron | 65.0% | |
!! | GCTGCCAGAGAAGAGGTGCC+AGG | + | chr1.3:76689436-76689455 | MS.gene056282:CDS | 65.0% |
ACGCGACCGAGTCGCGCGTT+AGG | - | chr1.3:76687956-76687975 | None:intergenic | 70.0% | |
CGGTCGCGTTCTGACGCGCT+AGG | + | chr1.3:76687967-76687986 | MS.gene056282:intron | 70.0% | |
GGCGATGGAACTACCCGGCG+TGG | + | chr1.3:76685606-76685625 | MS.gene056282:CDS | 70.0% | |
GGTCTAACGCGGCGCGATCG+CGG | - | chr1.3:76688013-76688032 | None:intergenic | 70.0% | |
! | GCGGGTGTCGTAGGCTCCCT+GGG | - | chr1.3:76690730-76690749 | None:intergenic | 70.0% |
! | TGCGGGTGTCGTAGGCTCCC+TGG | - | chr1.3:76690731-76690750 | None:intergenic | 70.0% |
! | AACGCGGCGCGATCGCGGCG+CGG | - | chr1.3:76688008-76688027 | None:intergenic | 80.0% |
! | AGCGGAAACGCGGCGCGGCG+CGG | + | chr1.3:76687523-76687542 | MS.gene056282:intron | 80.0% |
! | CGCGGTAAGCGGGCGCGACG+CGG | + | chr1.3:76687567-76687586 | MS.gene056282:intron | 80.0% |
! | GCGGTAAGCGGGCGCGACGC+GGG | + | chr1.3:76687568-76687587 | MS.gene056282:intron | 80.0% |
! | GGCGCGATCGCGGCGCGGAG+CGG | - | chr1.3:76688003-76688022 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 76685121 | 76690869 | 76685121 | ID=MS.gene056282 |
chr1.3 | mRNA | 76685121 | 76690869 | 76685121 | ID=MS.gene056282.t1;Parent=MS.gene056282 |
chr1.3 | exon | 76685121 | 76685178 | 76685121 | ID=MS.gene056282.t1.exon1;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76685121 | 76685178 | 76685121 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
chr1.3 | exon | 76685413 | 76685468 | 76685413 | ID=MS.gene056282.t1.exon2;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76685413 | 76685468 | 76685413 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
chr1.3 | exon | 76685570 | 76685668 | 76685570 | ID=MS.gene056282.t1.exon3;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76685570 | 76685668 | 76685570 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
chr1.3 | exon | 76685944 | 76686003 | 76685944 | ID=MS.gene056282.t1.exon4;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76685944 | 76686003 | 76685944 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
chr1.3 | exon | 76686829 | 76686940 | 76686829 | ID=MS.gene056282.t1.exon5;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76686829 | 76686940 | 76686829 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
chr1.3 | exon | 76687031 | 76687239 | 76687031 | ID=MS.gene056282.t1.exon6;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76687031 | 76687239 | 76687031 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
chr1.3 | exon | 76688352 | 76688483 | 76688352 | ID=MS.gene056282.t1.exon7;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76688352 | 76688483 | 76688352 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
chr1.3 | exon | 76689066 | 76689203 | 76689066 | ID=MS.gene056282.t1.exon8;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76689066 | 76689203 | 76689066 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
chr1.3 | exon | 76689430 | 76689580 | 76689430 | ID=MS.gene056282.t1.exon9;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76689430 | 76689580 | 76689430 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
chr1.3 | exon | 76689675 | 76689757 | 76689675 | ID=MS.gene056282.t1.exon10;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76689675 | 76689757 | 76689675 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
chr1.3 | exon | 76690170 | 76690217 | 76690170 | ID=MS.gene056282.t1.exon11;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76690170 | 76690217 | 76690170 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
chr1.3 | exon | 76690330 | 76690383 | 76690330 | ID=MS.gene056282.t1.exon12;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76690330 | 76690383 | 76690330 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
chr1.3 | exon | 76690502 | 76690585 | 76690502 | ID=MS.gene056282.t1.exon13;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76690502 | 76690585 | 76690502 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
chr1.3 | exon | 76690684 | 76690869 | 76690684 | ID=MS.gene056282.t1.exon14;Parent=MS.gene056282.t1 |
chr1.3 | CDS | 76690684 | 76690869 | 76690684 | ID=cds.MS.gene056282.t1;Parent=MS.gene056282.t1 |
Gene Sequence |
Protein sequence |