AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056842

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056842.t1 MTR_1g060790 97.439 859 20 1 1 857 1 859 0.0 1711
MS.gene056842.t1 MTR_7g104180 71.121 883 222 14 1 857 1 876 0.0 1167
MS.gene056842.t1 MTR_2g027240 64.399 441 150 6 392 825 127 567 0.0 587
MS.gene056842.t1 MTR_6g004720 63.294 425 148 4 399 819 181 601 0.0 556
MS.gene056842.t1 MTR_7g081665 59.023 471 172 9 400 857 299 761 0.0 551
MS.gene056842.t1 MTR_8g006870 58.386 471 169 8 367 818 258 720 0.0 551
MS.gene056842.t1 MTR_7g033640 67.363 383 119 3 443 819 207 589 0.0 546
MS.gene056842.t1 MTR_2g062850 59.305 403 159 4 424 824 126 525 8.80e-164 488
MS.gene056842.t1 MTR_8g446990 58.015 393 154 7 443 829 106 493 1.71e-151 456
MS.gene056842.t1 MTR_4g113790 53.061 392 169 4 443 819 66 457 7.84e-139 421
MS.gene056842.t1 MTR_2g085065 53.018 381 152 6 447 812 66 434 1.33e-127 391
MS.gene056842.t1 MTR_8g089420 49.250 400 166 7 436 819 45 423 2.94e-125 385
MS.gene056842.t1 MTR_2g018990 50.000 392 162 9 443 821 57 427 4.55e-125 384
MS.gene056842.t1 MTR_2g069990 44.708 463 208 15 407 857 33 459 7.46e-112 351
MS.gene056842.t1 MTR_8g070530 44.241 382 168 4 443 824 572 908 3.93e-103 341
MS.gene056842.t1 MTR_2g095980 45.263 380 163 4 443 818 346 684 1.00e-102 334
MS.gene056842.t1 MTR_2g095980 45.263 380 163 4 443 818 601 939 4.83e-101 336
MS.gene056842.t1 MTR_2g095980 45.263 380 163 4 443 818 601 939 1.66e-100 335
MS.gene056842.t1 MTR_4g061610 44.882 381 149 8 443 818 619 943 1.06e-95 322
MS.gene056842.t1 MTR_4g065080 39.305 374 194 9 465 819 10 369 4.17e-76 254
MS.gene056842.t1 MTR_2g098240 39.944 358 176 7 465 819 12 333 4.36e-75 250
MS.gene056842.t1 MTR_8g011780 39.733 375 190 10 465 825 15 367 6.54e-75 251
MS.gene056842.t1 MTR_7g053200 38.172 372 198 9 460 819 1 352 3.16e-70 238
MS.gene056842.t1 MTR_5g069000 36.550 342 171 8 467 807 760 1056 4.46e-59 219
MS.gene056842.t1 MTR_4g035835 36.257 342 172 8 467 807 756 1052 9.05e-59 218
MS.gene056842.t1 MTR_6g470940 37.719 342 168 8 467 807 874 1171 1.72e-57 215
MS.gene056842.t1 MTR_3g104700 32.258 372 213 11 443 807 67 406 8.74e-48 178
MS.gene056842.t1 MTR_1g075880 31.335 367 212 8 459 820 106 437 3.48e-47 177
MS.gene056842.t1 MTR_7g097150 30.691 391 226 11 459 840 109 463 1.04e-46 176
MS.gene056842.t1 MTR_1g019340 31.831 355 204 9 459 810 97 416 5.64e-46 173
MS.gene056842.t1 MTR_1g019340 31.831 355 204 9 459 810 97 416 1.58e-45 171
MS.gene056842.t1 MTR_1g069735 31.063 367 212 10 459 820 109 439 2.14e-45 170
MS.gene056842.t1 MTR_1g069735 31.063 367 212 10 459 820 109 439 3.17e-45 170
MS.gene056842.t1 MTR_1g069735 31.063 367 212 10 459 820 109 439 8.99e-45 170
MS.gene056842.t1 MTR_1g442790 30.491 387 226 11 465 842 105 457 1.22e-44 169
MS.gene056842.t1 MTR_1g442790 30.491 387 226 11 465 842 105 457 1.23e-44 169
MS.gene056842.t1 MTR_3g104700 31.105 389 212 12 443 807 67 423 1.23e-44 169
MS.gene056842.t1 MTR_2g040150 30.029 343 207 8 469 807 112 425 3.33e-41 159
MS.gene056842.t1 MTR_1g042700 28.947 380 233 8 442 819 87 431 1.40e-40 157
MS.gene056842.t1 MTR_7g073520 37.107 159 98 1 465 623 143 299 1.53e-26 114
MS.gene056842.t1 MTR_7g073520 47.748 111 55 2 698 807 301 409 1.04e-23 105
MS.gene056842.t1 MTR_4g107280 37.126 167 91 4 460 617 80 241 1.88e-26 113
MS.gene056842.t1 MTR_4g107280 41.964 112 62 2 698 808 249 358 1.62e-24 107
MS.gene056842.t1 MTR_1g090917 36.667 150 89 2 467 614 48 193 1.63e-25 111
MS.gene056842.t1 MTR_1g090917 36.800 125 76 2 695 818 212 334 6.19e-15 79.0
MS.gene056842.t1 MTR_1g090917 36.667 150 89 2 467 614 48 193 1.78e-25 111
MS.gene056842.t1 MTR_1g090917 36.800 125 76 2 695 818 212 334 7.01e-15 78.6
MS.gene056842.t1 MTR_4g107280 41.964 112 62 2 698 808 210 319 9.68e-25 107
MS.gene056842.t1 MTR_4g107280 45.977 87 40 3 533 617 121 202 8.26e-15 77.8
MS.gene056842.t1 MTR_3g088715 41.071 112 62 1 692 803 19 126 6.62e-24 98.6
MS.gene056842.t1 MTR_8g035890 27.300 337 164 8 467 803 13 268 1.07e-23 102
MS.gene056842.t1 MTR_3g010260 41.892 148 70 2 1 148 1 132 9.92e-22 101
MS.gene056842.t1 MTR_8g040300 27.164 335 163 8 467 801 7 260 7.60e-21 94.0
MS.gene056842.t1 MTR_3g099920 27.557 352 169 12 467 816 16 283 7.97e-21 97.4
MS.gene056842.t1 MTR_3g110405 36.129 155 93 2 467 619 34 184 2.91e-20 92.8
MS.gene056842.t1 MTR_3g110405 37.963 108 63 1 695 802 185 288 6.41e-17 82.8
MS.gene056842.t1 MTR_3g072320 24.848 330 170 5 463 791 5 257 1.09e-19 93.2
MS.gene056842.t1 MTR_6g012990 26.549 339 165 9 467 803 16 272 1.83e-19 91.7
MS.gene056842.t1 MTR_6g012990 26.549 339 165 9 467 803 16 272 2.75e-19 92.4
MS.gene056842.t1 MTR_6g048250 26.627 338 164 9 467 802 16 271 3.02e-19 90.9
MS.gene056842.t1 MTR_6g048250 26.627 338 164 9 467 802 16 271 4.75e-19 91.3
MS.gene056842.t1 MTR_6g048250 26.627 338 164 9 467 802 16 271 6.37e-19 91.7
MS.gene056842.t1 MTR_4g029020 32.903 155 101 2 463 617 5 156 5.39e-18 88.2
MS.gene056842.t1 MTR_6g087000 36.434 129 74 4 695 818 909 1034 4.22e-17 87.0
MS.gene056842.t1 MTR_8g086380 25.704 284 137 6 465 747 21 231 3.38e-16 82.8
MS.gene056842.t1 MTR_7g072575 29.000 200 128 4 463 661 5 191 4.66e-16 82.4
MS.gene056842.t1 MTR_3g466400 29.814 161 109 2 457 617 2 158 5.22e-16 82.0
MS.gene056842.t1 MTR_4g006970 31.757 148 98 1 470 617 20 164 1.39e-15 80.9
MS.gene056842.t1 MTR_1g103760 23.269 361 196 7 461 820 3 283 1.68e-15 80.5
MS.gene056842.t1 MTR_1g090917 36.800 125 76 2 695 818 87 209 1.74e-15 79.7
MS.gene056842.t1 MTR_1g090917 45.833 72 33 2 545 614 1 68 1.02e-13 74.3
MS.gene056842.t1 MTR_1g076370 32.680 153 99 4 467 617 17 167 2.07e-15 80.1
MS.gene056842.t1 MTR_1g090917 36.800 125 76 2 695 818 87 209 2.20e-15 79.3
MS.gene056842.t1 MTR_1g090917 45.833 72 33 2 545 614 1 68 1.23e-13 73.9
MS.gene056842.t1 MTR_5g075060 29.139 151 104 2 467 617 9 156 4.08e-15 79.3
MS.gene056842.t1 MTR_2g016340 28.866 194 120 6 463 653 5 183 9.14e-15 78.2
MS.gene056842.t1 MTR_3g466480 31.757 148 98 2 470 617 21 165 9.72e-15 78.2
MS.gene056842.t1 MTR_2g049790 30.000 150 99 2 470 617 23 168 1.07e-14 77.8
MS.gene056842.t1 MTR_4g131060 30.323 155 105 2 462 616 10 161 1.70e-14 77.0
MS.gene056842.t1 MTR_7g113490 33.557 149 88 4 476 617 74 218 1.70e-14 78.2
MS.gene056842.t1 MTR_8g024590 28.571 161 113 2 470 630 17 175 1.84e-14 77.0
MS.gene056842.t1 MTR_0464s0040 30.968 155 104 1 463 617 5 156 2.00e-14 73.2
MS.gene056842.t1 MTR_6g006770 31.818 154 101 3 465 617 11 161 2.85e-14 77.4
MS.gene056842.t1 MTR_8g024600 27.950 161 114 2 470 630 17 175 3.67e-14 76.3
MS.gene056842.t1 MTR_2g020380 33.117 154 93 3 467 619 1 145 4.67e-14 77.0
MS.gene056842.t1 MTR_3g096230 32.278 158 99 3 474 627 248 401 6.14e-14 75.9
MS.gene056842.t1 MTR_2g045470 30.189 159 109 2 459 617 9 165 6.80e-14 75.5
MS.gene056842.t1 MTR_7g116390 38.318 107 59 3 698 801 171 273 8.59e-14 73.6
MS.gene056842.t1 MTR_7g116390 30.201 149 99 3 468 614 14 159 2.01e-12 69.3
MS.gene056842.t1 MTR_1g080020 37.624 101 57 2 703 801 167 263 1.09e-13 72.8
MS.gene056842.t1 MTR_3g096230 32.278 158 99 3 474 627 248 401 1.31e-13 75.1
MS.gene056842.t1 MTR_5g088350 31.707 123 78 2 497 617 40 158 1.35e-13 74.3
MS.gene056842.t1 MTR_5g088350 31.707 123 78 2 497 617 40 158 1.52e-13 73.2
MS.gene056842.t1 MTR_4g019410 38.462 104 58 3 701 802 177 276 1.90e-13 74.3
MS.gene056842.t1 MTR_4g019410 37.736 106 60 3 699 802 175 276 1.93e-13 74.7
MS.gene056842.t1 MTR_1g081000 28.571 154 104 3 467 617 1 151 2.47e-13 74.3
MS.gene056842.t1 MTR_1g081000 28.571 154 104 3 467 617 1 151 2.77e-13 73.9
MS.gene056842.t1 MTR_5g088350 31.707 123 78 2 497 617 40 158 2.82e-13 73.2
MS.gene056842.t1 MTR_1g013700 32.051 156 101 2 462 617 7 157 3.59e-13 72.8
MS.gene056842.t1 MTR_4g051648 29.221 154 103 3 467 617 5 155 4.44e-13 73.9
MS.gene056842.t1 MTR_5g067150 25.153 163 116 2 470 630 9 167 6.89e-13 72.0
MS.gene056842.t1 MTR_5g067150 27.941 136 92 2 497 630 36 167 6.98e-13 71.6
MS.gene056842.t1 MTR_5g067150 25.153 163 116 2 470 630 9 167 7.08e-13 72.0
MS.gene056842.t1 MTR_5g075100 31.757 148 99 2 470 617 23 168 7.40e-13 72.0
MS.gene056842.t1 MTR_2g078740 31.081 148 98 2 470 617 15 158 7.97e-13 72.8
MS.gene056842.t1 MTR_2g078740 31.081 148 98 2 470 617 15 158 8.53e-13 72.8
MS.gene056842.t1 MTR_2g078740 31.081 148 98 2 470 617 15 158 8.74e-13 72.8
MS.gene056842.t1 MTR_1g040875 29.605 152 104 2 467 617 21 170 1.04e-12 71.6
MS.gene056842.t1 MTR_8g098425 33.562 146 89 3 476 617 414 555 1.20e-12 72.4
MS.gene056842.t1 MTR_4g005730 29.221 154 105 3 465 617 19 169 1.29e-12 72.0
MS.gene056842.t1 MTR_4g005730 29.221 154 105 3 465 617 19 169 1.31e-12 72.0
MS.gene056842.t1 MTR_4g005730 29.221 154 105 3 465 617 19 169 1.35e-12 72.0
MS.gene056842.t1 MTR_4g128820 30.612 147 86 2 497 629 37 181 1.38e-12 71.2
MS.gene056842.t1 MTR_1g101630 34.211 152 94 4 470 617 41 190 1.47e-12 71.6
MS.gene056842.t1 MTR_5g045190 30.405 148 100 2 470 617 239 383 2.28e-12 71.2
MS.gene056842.t1 MTR_4g088745 23.361 244 114 3 517 760 94 264 2.57e-12 69.7
MS.gene056842.t1 MTR_1g077800 23.315 356 184 11 468 818 13 284 2.58e-12 70.9
MS.gene056842.t1 MTR_4g109090 31.844 179 97 7 452 617 85 251 2.76e-12 70.9
MS.gene056842.t1 MTR_1g077800 23.315 356 184 11 468 818 13 284 2.78e-12 70.9
MS.gene056842.t1 MTR_1g055255 34.746 118 64 4 700 815 283 389 3.18e-12 70.5
MS.gene056842.t1 MTR_1g048630 34.906 106 63 2 701 806 162 261 3.19e-12 71.2
MS.gene056842.t1 MTR_7g084220 30.952 168 107 4 469 633 787 948 4.27e-12 70.9
MS.gene056842.t1 MTR_1g100250 30.137 146 98 3 474 617 415 558 4.68e-12 70.5
MS.gene056842.t1 MTR_4g114670 29.412 136 90 2 497 630 38 169 4.76e-12 69.3
MS.gene056842.t1 MTR_2g105010 33.108 148 96 2 470 617 14 158 4.94e-12 69.3
MS.gene056842.t1 MTR_8g093730 31.210 157 102 4 474 627 303 456 6.68e-12 69.7
MS.gene056842.t1 MTR_4g114670 30.894 123 79 2 497 617 38 156 7.52e-12 68.9
MS.gene056842.t1 MTR_1g052115 27.389 157 112 2 467 622 1 156 9.19e-12 69.7
MS.gene056842.t1 MTR_1g096490 35.032 157 95 5 467 618 26 180 9.48e-12 68.9
MS.gene056842.t1 MTR_2g100030 30.667 150 99 3 470 617 18 164 1.04e-11 68.9
MS.gene056842.t1 MTR_4g078290 33.544 158 84 6 470 617 129 275 1.16e-11 68.9
MS.gene056842.t1 MTR_4g078290 33.544 158 84 6 470 617 129 275 1.16e-11 68.9
MS.gene056842.t1 MTR_3g099767 36.054 147 80 4 476 619 118 253 1.20e-11 68.6
MS.gene056842.t1 MTR_8g095440 31.613 155 96 4 470 618 30 180 1.84e-11 67.8
MS.gene056842.t1 MTR_8g095440 31.613 155 96 4 470 618 30 180 1.99e-11 67.4
MS.gene056842.t1 MTR_7g092360 26.452 155 110 3 467 619 13 165 2.09e-11 68.2
MS.gene056842.t1 MTR_4g088755 22.951 244 115 3 517 760 89 259 2.71e-11 66.6
MS.gene056842.t1 MTR_7g106710 35.577 104 60 3 702 803 296 394 4.63e-11 66.2
MS.gene056842.t1 MTR_3g098760 33.125 160 84 7 469 617 96 243 8.22e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056842.t1 AT3G52890 52.824 956 330 32 1 857 1 934 0.0 829
MS.gene056842.t1 AT3G52890 52.824 956 330 32 1 857 1 934 0.0 829
MS.gene056842.t1 AT3G52890 52.824 956 330 32 1 857 1 934 0.0 829
MS.gene056842.t1 AT3G52890 52.824 956 330 32 1 857 1 934 0.0 829
MS.gene056842.t1 AT2G36350 50.466 965 354 24 1 857 1 949 0.0 804
MS.gene056842.t1 AT5G03640 70.742 458 105 10 419 857 479 926 0.0 659
MS.gene056842.t1 AT5G03640 33.077 390 189 13 1 371 1 337 3.19e-30 129
MS.gene056842.t1 AT5G03640 70.742 458 105 10 419 857 479 926 0.0 659
MS.gene056842.t1 AT5G03640 33.077 390 189 13 1 371 1 337 3.19e-30 129
MS.gene056842.t1 AT5G47750 61.345 476 173 7 392 857 112 586 0.0 587
MS.gene056842.t1 AT4G26610 62.850 428 154 4 401 825 54 479 0.0 556
MS.gene056842.t1 AT5G55910 60.970 433 152 7 403 825 44 469 3.96e-180 528
MS.gene056842.t1 AT5G55910 60.970 433 152 7 403 825 44 469 3.96e-180 528
MS.gene056842.t1 AT2G44830 61.882 425 148 7 408 825 303 720 7.32e-180 537
MS.gene056842.t1 AT2G44830 61.882 425 148 7 408 825 303 720 7.32e-180 537
MS.gene056842.t1 AT2G44830 61.882 425 148 7 408 825 303 720 7.32e-180 537
MS.gene056842.t1 AT3G27580 64.398 382 130 6 443 819 153 533 2.20e-172 511
MS.gene056842.t1 AT3G27580 64.398 382 130 6 443 819 153 533 2.20e-172 511
MS.gene056842.t1 AT5G40030 57.631 439 163 9 430 857 73 499 6.97e-170 502
MS.gene056842.t1 AT3G12690 62.368 380 131 3 443 820 158 527 5.12e-165 492
MS.gene056842.t1 AT3G12690 62.368 380 131 3 443 820 158 527 5.12e-165 492
MS.gene056842.t1 AT3G12690 62.368 380 131 3 443 820 158 527 5.12e-165 492
MS.gene056842.t1 AT1G79250 60.614 391 152 2 436 824 112 502 6.40e-165 491
MS.gene056842.t1 AT1G79250 60.614 391 152 2 436 824 112 502 6.40e-165 491
MS.gene056842.t1 AT1G79250 60.614 391 152 2 436 824 112 502 6.40e-165 491
MS.gene056842.t1 AT1G79250 60.614 391 152 2 436 824 112 502 6.40e-165 491
MS.gene056842.t1 AT1G16440 59.375 384 143 5 443 824 86 458 1.77e-155 464
MS.gene056842.t1 AT3G44610 55.000 360 130 7 475 812 74 423 2.61e-128 393
MS.gene056842.t1 AT2G34650 52.972 387 147 8 443 819 50 411 4.56e-128 392
MS.gene056842.t1 AT2G26700 45.575 452 180 9 425 819 40 482 2.69e-125 387
MS.gene056842.t1 AT5G58140 45.333 375 160 2 444 818 551 880 7.42e-104 342
MS.gene056842.t1 AT5G58140 45.333 375 160 2 444 818 551 880 7.42e-104 342
MS.gene056842.t1 AT5G58140 45.333 375 160 2 444 818 551 880 7.42e-104 342
MS.gene056842.t1 AT5G58140 45.333 375 160 2 444 818 551 880 7.42e-104 342
MS.gene056842.t1 AT5G58140 45.333 375 160 2 444 818 551 880 7.42e-104 342
MS.gene056842.t1 AT3G14370 44.764 382 171 6 445 817 61 411 1.09e-103 329
MS.gene056842.t1 AT5G58140 45.380 368 156 2 444 811 551 873 2.59e-102 338
MS.gene056842.t1 AT1G53700 45.128 390 169 9 445 823 66 421 1.56e-98 316
MS.gene056842.t1 AT3G45780 43.883 376 168 2 443 818 636 968 1.99e-97 327
MS.gene056842.t1 AT3G45780 43.883 376 168 2 443 818 636 968 1.99e-97 327
MS.gene056842.t1 AT1G51170 39.674 368 183 9 465 819 17 358 3.95e-71 240
MS.gene056842.t1 AT3G20830 39.221 385 191 11 464 831 15 373 4.33e-71 240
MS.gene056842.t1 AT4G13000 36.388 371 199 10 465 831 15 352 6.77e-67 228
MS.gene056842.t1 AT3G25250 35.829 374 195 9 459 819 6 347 2.03e-65 225
MS.gene056842.t1 AT1G45160 38.162 359 166 8 465 817 665 973 7.82e-59 218
MS.gene056842.t1 AT1G45160 38.162 359 166 8 465 817 665 973 1.95e-58 217
MS.gene056842.t1 AT1G48490 37.391 345 163 10 465 807 823 1116 6.26e-58 216
MS.gene056842.t1 AT1G48490 37.391 345 163 10 465 807 823 1116 6.26e-58 216
MS.gene056842.t1 AT1G48490 37.391 345 163 10 465 807 823 1116 6.26e-58 216
MS.gene056842.t1 AT1G48490 37.391 345 163 10 465 807 824 1117 6.33e-58 216
MS.gene056842.t1 AT5G62310 37.026 343 169 10 467 807 751 1048 1.31e-57 215
MS.gene056842.t1 AT3G17850 37.135 342 170 8 467 807 879 1176 4.94e-57 213
MS.gene056842.t1 AT1G30640 30.688 378 225 8 448 821 98 442 2.69e-49 184
MS.gene056842.t1 AT1G30640 30.688 378 225 8 448 821 98 442 2.69e-49 184
MS.gene056842.t1 AT1G30640 30.423 378 226 8 448 821 5 349 3.58e-49 181
MS.gene056842.t1 AT4G14350 31.414 382 220 9 445 820 94 439 3.46e-46 174
MS.gene056842.t1 AT4G14350 31.414 382 220 9 445 820 94 439 3.46e-46 174
MS.gene056842.t1 AT4G14350 31.414 382 220 9 445 820 94 439 3.46e-46 174
MS.gene056842.t1 AT4G14350 31.414 382 220 9 445 820 94 439 3.99e-46 174
MS.gene056842.t1 AT2G20470 30.280 393 228 10 459 842 113 468 4.45e-45 171
MS.gene056842.t1 AT1G03920 30.894 369 210 10 459 820 126 456 5.22e-45 171
MS.gene056842.t1 AT1G03920 30.894 369 210 10 459 820 126 456 5.22e-45 171
MS.gene056842.t1 AT2G20470 30.280 393 228 10 459 842 113 468 6.18e-45 171
MS.gene056842.t1 AT2G20470 30.280 393 228 10 459 842 113 468 6.18e-45 171
MS.gene056842.t1 AT5G09890 30.812 357 201 8 459 807 91 409 7.69e-45 170
MS.gene056842.t1 AT5G09890 30.812 357 201 8 459 807 91 409 7.70e-45 170
MS.gene056842.t1 AT3G23310 28.970 466 276 14 363 820 24 442 8.01e-45 171
MS.gene056842.t1 AT1G03920 30.894 369 210 10 459 820 13 343 1.22e-44 168
MS.gene056842.t1 AT4G33080 29.351 385 233 10 445 820 69 423 1.42e-44 169
MS.gene056842.t1 AT4G33080 29.351 385 233 10 445 820 69 423 1.54e-44 169
MS.gene056842.t1 AT2G19400 29.598 348 212 8 465 807 100 419 2.29e-38 151
MS.gene056842.t1 AT5G58140 43.511 131 74 0 444 574 551 681 4.16e-29 124
MS.gene056842.t1 AT3G08720 38.710 155 93 1 463 617 133 285 3.16e-28 119
MS.gene056842.t1 AT3G08720 48.673 113 54 3 696 807 291 400 8.64e-27 115
MS.gene056842.t1 AT3G08720 38.710 155 93 1 463 617 133 285 3.16e-28 119
MS.gene056842.t1 AT3G08720 48.673 113 54 3 696 807 291 400 8.64e-27 115
MS.gene056842.t1 AT3G08720 38.710 155 93 1 463 617 133 285 3.16e-28 119
MS.gene056842.t1 AT3G08720 48.673 113 54 3 696 807 291 400 8.64e-27 115
MS.gene056842.t1 AT3G08720 38.710 155 93 1 463 617 133 285 3.16e-28 119
MS.gene056842.t1 AT3G08720 48.673 113 54 3 696 807 291 400 8.64e-27 115
MS.gene056842.t1 AT2G25090 27.976 336 167 9 470 802 15 278 5.65e-28 119
MS.gene056842.t1 AT3G08730 38.065 155 94 1 463 617 127 279 9.50e-28 118
MS.gene056842.t1 AT3G08730 49.558 113 53 3 696 807 285 394 1.53e-27 117
MS.gene056842.t1 AT3G08730 38.065 155 94 1 463 617 127 279 9.50e-28 118
MS.gene056842.t1 AT3G08730 49.558 113 53 3 696 807 285 394 1.53e-27 117
MS.gene056842.t1 AT5G04510 35.196 179 104 3 438 614 18 186 2.34e-26 110
MS.gene056842.t1 AT5G04510 35.196 179 104 3 438 614 18 186 2.69e-26 112
MS.gene056842.t1 AT5G04510 35.938 128 78 3 695 820 205 330 2.20e-18 89.0
MS.gene056842.t1 AT5G04510 35.196 179 104 3 438 614 18 186 3.93e-26 113
MS.gene056842.t1 AT5G04510 35.938 128 78 3 695 820 205 330 2.08e-18 89.7
MS.gene056842.t1 AT3G10540 35.196 179 104 3 438 614 19 187 1.93e-25 111
MS.gene056842.t1 AT3G10540 35.156 128 79 3 695 820 206 331 6.78e-18 88.2
MS.gene056842.t1 AT2G20050 42.241 116 61 3 698 810 931 1043 5.61e-20 96.3
MS.gene056842.t1 AT2G20050 42.241 116 61 3 698 810 934 1046 5.67e-20 96.3
MS.gene056842.t1 AT2G45490 41.905 105 57 1 698 802 173 273 9.41e-20 90.9
MS.gene056842.t1 AT2G45490 33.117 154 99 2 467 619 19 169 3.89e-17 83.2
MS.gene056842.t1 AT4G18700 26.543 324 162 7 465 787 21 269 1.28e-19 93.6
MS.gene056842.t1 AT3G01090 26.685 371 182 12 467 834 16 299 2.15e-19 93.2
MS.gene056842.t1 AT3G01090 26.685 371 182 12 467 834 16 299 2.15e-19 93.2
MS.gene056842.t1 AT5G45810 25.455 330 170 7 459 787 17 271 2.67e-19 92.4
MS.gene056842.t1 AT3G01090 26.685 371 182 12 467 834 39 322 2.84e-19 92.8
MS.gene056842.t1 AT3G29160 25.959 339 167 9 467 803 17 273 8.47e-19 89.7
MS.gene056842.t1 AT3G29160 25.959 339 167 9 467 803 17 273 1.72e-18 90.1
MS.gene056842.t1 AT3G29160 25.959 339 167 9 467 803 17 273 1.72e-18 90.1
MS.gene056842.t1 AT2G25880 40.187 107 60 1 695 801 141 243 2.04e-18 86.3
MS.gene056842.t1 AT5G45820 32.484 157 103 2 461 617 3 156 2.74e-18 89.0
MS.gene056842.t1 AT2G25880 40.187 107 60 1 695 801 173 275 3.08e-18 86.7
MS.gene056842.t1 AT2G25880 28.708 209 139 3 469 675 24 224 1.21e-17 84.7
MS.gene056842.t1 AT5G18700 35.484 155 92 3 467 621 1 147 3.32e-18 90.9
MS.gene056842.t1 AT2G25880 40.187 107 60 1 695 801 186 288 3.33e-18 86.7
MS.gene056842.t1 AT2G25880 28.708 209 139 3 469 675 37 237 3.30e-17 84.0
MS.gene056842.t1 AT2G34180 24.355 349 184 8 456 803 43 312 8.85e-18 87.8
MS.gene056842.t1 AT2G25880 40.187 107 60 1 695 801 234 336 9.40e-18 86.3
MS.gene056842.t1 AT2G25880 28.708 209 139 3 469 675 85 285 1.06e-16 83.2
MS.gene056842.t1 AT4G32830 35.714 154 93 2 467 618 28 177 1.09e-17 85.1
MS.gene056842.t1 AT4G32830 38.318 107 62 1 695 801 179 281 3.26e-17 83.6
MS.gene056842.t1 AT5G25110 31.977 172 110 3 449 617 20 187 2.24e-17 86.7
MS.gene056842.t1 AT2G45490 33.117 154 99 2 467 619 19 169 4.03e-17 82.4
MS.gene056842.t1 AT2G45490 39.024 82 50 0 698 779 173 254 3.15e-13 71.2
MS.gene056842.t1 AT1G29230 25.078 319 163 6 470 787 74 317 7.00e-17 85.1
MS.gene056842.t1 AT1G12680 33.333 159 96 4 469 626 106 255 1.94e-16 83.6
MS.gene056842.t1 AT5G10930 34.667 150 92 5 470 617 12 157 4.60e-16 82.0
MS.gene056842.t1 AT4G14580 32.051 156 103 3 463 617 14 167 5.74e-16 81.6
MS.gene056842.t1 AT4G24400 29.448 163 109 2 470 630 9 167 8.13e-16 81.3
MS.gene056842.t1 AT4G24400 29.448 163 109 2 470 630 9 167 9.42e-16 80.9
MS.gene056842.t1 AT5G01810 32.911 158 102 3 464 621 7 160 1.55e-15 80.5
MS.gene056842.t1 AT5G01810 32.911 158 102 3 464 621 7 160 1.55e-15 80.5
MS.gene056842.t1 AT5G01810 32.911 158 102 3 464 621 7 160 2.48e-15 79.3
MS.gene056842.t1 AT5G58380 22.222 333 181 8 470 802 12 266 4.56e-15 79.3
MS.gene056842.t1 AT1G08650 38.835 103 57 2 703 803 176 274 7.59e-15 76.6
MS.gene056842.t1 AT3G06030 34.694 147 89 4 476 617 74 218 8.08e-15 79.0
MS.gene056842.t1 AT3G23000 32.468 154 97 3 467 617 22 171 8.25e-15 78.2
MS.gene056842.t1 AT3G04810 29.870 154 102 3 467 617 1 151 1.08e-14 78.6
MS.gene056842.t1 AT3G04810 29.870 154 102 3 467 617 1 151 1.08e-14 78.6
MS.gene056842.t1 AT3G04810 29.870 154 102 3 467 617 1 151 1.08e-14 78.6
MS.gene056842.t1 AT1G70430 31.373 153 103 1 465 617 11 161 1.43e-14 78.2
MS.gene056842.t1 AT1G70430 31.373 153 103 1 465 617 11 161 1.55e-14 78.2
MS.gene056842.t1 AT1G70430 31.373 153 103 1 465 617 11 161 1.63e-14 78.2
MS.gene056842.t1 AT1G53570 32.121 165 106 5 466 627 210 371 1.81e-14 77.8
MS.gene056842.t1 AT1G53570 32.121 165 106 5 466 627 210 371 1.84e-14 77.8
MS.gene056842.t1 AT1G30270 32.667 150 95 4 470 617 31 176 1.85e-14 77.4
MS.gene056842.t1 AT1G08650 41.304 92 52 1 703 792 176 267 2.07e-14 75.1
MS.gene056842.t1 AT1G53570 32.121 165 106 5 466 627 210 371 2.88e-14 77.4
MS.gene056842.t1 AT1G30270 32.667 150 95 4 470 617 31 176 3.04e-14 76.6
MS.gene056842.t1 AT1G53570 32.121 165 106 5 466 627 210 371 3.08e-14 77.0
MS.gene056842.t1 AT1G53570 32.121 165 106 5 466 627 210 371 3.08e-14 77.0
MS.gene056842.t1 AT1G53570 32.121 165 106 5 466 627 210 371 3.13e-14 77.0
MS.gene056842.t1 AT5G57630 27.673 159 107 3 463 617 2 156 5.23e-14 75.5
MS.gene056842.t1 AT5G57630 27.673 159 107 3 463 617 2 156 5.49e-14 75.5
MS.gene056842.t1 AT3G17510 28.033 239 135 7 467 673 17 250 5.79e-14 75.5
MS.gene056842.t1 AT5G14720 31.169 154 102 3 465 617 11 161 6.66e-14 76.3
MS.gene056842.t1 AT5G14720 31.169 154 102 3 465 617 11 161 6.66e-14 76.3
MS.gene056842.t1 AT1G09000 32.653 147 92 4 476 617 75 219 8.76e-14 75.9
MS.gene056842.t1 AT1G09000 32.653 147 92 4 476 617 75 219 8.93e-14 75.9
MS.gene056842.t1 AT2G30360 32.903 155 97 5 470 621 21 171 9.60e-14 74.7
MS.gene056842.t1 AT1G01140 30.201 149 102 2 469 617 18 164 1.02e-13 74.7
MS.gene056842.t1 AT1G01140 30.201 149 102 2 469 617 18 164 1.03e-13 74.7
MS.gene056842.t1 AT1G01140 30.201 149 102 2 469 617 18 164 1.08e-13 74.7
MS.gene056842.t1 AT1G54960 32.653 147 92 4 476 617 74 218 1.56e-13 75.1
MS.gene056842.t1 AT1G54960 32.653 147 92 4 476 617 74 218 1.56e-13 75.1
MS.gene056842.t1 AT2G26980 33.058 121 79 2 497 617 41 159 2.38e-13 71.6
MS.gene056842.t1 AT5G28290 29.870 154 102 3 467 617 1 151 2.48e-13 74.3
MS.gene056842.t1 AT5G28290 29.870 154 102 3 467 617 1 151 2.48e-13 74.3
MS.gene056842.t1 AT5G28290 29.870 154 102 3 467 617 1 151 2.91e-13 73.9
MS.gene056842.t1 AT1G32320 32.895 152 92 3 467 617 45 187 3.27e-13 72.0
MS.gene056842.t1 AT2G26980 33.058 121 79 2 497 617 41 159 3.47e-13 72.8
MS.gene056842.t1 AT2G26980 33.058 121 79 2 497 617 41 159 3.78e-13 73.2
MS.gene056842.t1 AT3G04530 35.106 94 59 1 699 790 168 261 4.00e-13 71.2
MS.gene056842.t1 AT2G26980 33.058 121 79 2 497 617 41 159 4.34e-13 72.8
MS.gene056842.t1 AT2G26980 33.058 121 79 2 497 617 51 169 4.35e-13 72.8
MS.gene056842.t1 AT4G30960 33.108 148 96 2 470 617 24 168 6.14e-13 72.4
MS.gene056842.t1 AT3G44200 29.375 160 105 4 467 621 5 161 6.67e-13 73.2
MS.gene056842.t1 AT3G44200 29.375 160 105 4 467 621 5 161 6.67e-13 73.2
MS.gene056842.t1 AT4G09570 35.669 157 94 5 467 618 21 175 8.49e-13 72.4
MS.gene056842.t1 AT5G39440 31.373 153 99 2 467 617 16 164 1.11e-12 72.0
MS.gene056842.t1 AT5G21326 31.707 123 78 2 497 617 40 158 1.21e-12 71.6
MS.gene056842.t1 AT5G38210 28.116 345 192 15 308 617 175 498 1.34e-12 72.0
MS.gene056842.t1 AT5G38210 28.116 345 192 15 308 617 193 516 1.41e-12 72.0
MS.gene056842.t1 AT5G39420 33.708 178 95 7 452 617 85 251 1.81e-12 71.6
MS.gene056842.t1 AT2G38490 33.987 153 88 5 470 617 28 172 2.56e-12 70.5
MS.gene056842.t1 AT1G54510 27.922 154 105 3 467 617 1 151 3.03e-12 70.9
MS.gene056842.t1 AT1G54510 27.922 154 105 3 467 617 1 151 3.03e-12 70.9
MS.gene056842.t1 AT1G54510 27.922 154 105 3 467 617 1 151 3.03e-12 70.9
MS.gene056842.t1 AT1G54510 27.922 154 105 3 467 617 1 151 3.03e-12 70.9
MS.gene056842.t1 AT4G24100 29.139 151 103 2 468 617 31 178 3.58e-12 70.9
MS.gene056842.t1 AT4G24100 29.139 151 103 2 468 617 31 178 3.83e-12 70.5
MS.gene056842.t1 AT4G24100 29.139 151 103 2 468 617 47 194 4.35e-12 70.5
MS.gene056842.t1 AT5G35410 28.824 170 111 4 497 662 38 201 4.72e-12 69.3
MS.gene056842.t1 AT4G24100 29.139 151 103 2 468 617 47 194 5.16e-12 70.1
MS.gene056842.t1 AT4G14480 30.201 149 101 2 470 617 15 161 5.51e-12 69.7
MS.gene056842.t1 AT1G69220 29.054 148 102 2 470 617 249 393 5.81e-12 70.1
MS.gene056842.t1 AT1G50240 34.951 103 61 2 701 803 161 257 5.98e-12 70.5
MS.gene056842.t1 AT1G50240 34.951 103 61 2 701 803 161 257 5.98e-12 70.5
MS.gene056842.t1 AT1G24650 31.795 195 112 8 433 616 513 697 7.53e-12 69.7
MS.gene056842.t1 AT5G35410 28.824 170 111 4 497 662 38 201 8.24e-12 68.9
MS.gene056842.t1 AT1G53165 29.730 148 100 2 470 617 15 158 8.39e-12 69.3
MS.gene056842.t1 AT1G53165 29.730 148 100 2 470 617 15 158 8.42e-12 69.3
MS.gene056842.t1 AT1G53165 29.730 148 100 2 470 617 15 158 8.94e-12 69.3
MS.gene056842.t1 AT4G04720 30.323 155 98 4 470 618 80 230 9.38e-12 68.9
MS.gene056842.t1 AT4G04720 30.323 155 98 4 470 618 80 230 9.38e-12 68.9
MS.gene056842.t1 AT3G20860 25.828 151 111 1 467 617 1 150 9.50e-12 68.6
MS.gene056842.t1 AT1G35670 35.032 157 95 5 467 618 22 176 9.66e-12 68.9
MS.gene056842.t1 AT5G01820 32.237 152 100 2 470 621 22 170 1.03e-11 68.6
MS.gene056842.t1 AT2G41860 30.769 156 100 4 468 618 52 204 1.08e-11 68.9
MS.gene056842.t1 AT2G41860 30.769 156 100 4 468 618 52 204 1.11e-11 68.9
MS.gene056842.t1 AT3G15220 29.054 148 101 2 470 617 15 158 1.25e-11 68.9
MS.gene056842.t1 AT5G38210 30.303 264 153 11 366 617 260 504 1.64e-11 68.6
MS.gene056842.t1 AT2G01820 33.766 154 94 5 469 616 584 735 1.88e-11 68.6
MS.gene056842.t1 AT1G48260 31.646 158 96 5 466 617 5 156 2.97e-11 67.0
MS.gene056842.t1 AT1G63700 30.556 144 96 3 476 617 406 547 4.11e-11 67.4
MS.gene056842.t1 AT1G63700 30.556 144 96 3 476 617 406 547 4.11e-11 67.4
MS.gene056842.t1 AT1G73500 29.775 178 104 6 473 646 50 210 7.60e-11 64.7

Find 193 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATGTTCATCAAGTAAATT+TGG 0.123957 1.1:+46228490 MS.gene056842:CDS
CGTTCTTCGAGGGGCTTAAT+TGG 0.182487 1.1:+46231474 MS.gene056842:CDS
CCAAAGCAGGGTTCTGATTC+TGG 0.182601 1.1:+46228790 MS.gene056842:CDS
ATAGATCCTGCCAAGGTTTC+TGG 0.192162 1.1:+46230972 MS.gene056842:CDS
GTGGGATAGCACAACGTATT+AGG 0.195471 1.1:-46231499 None:intergenic
TAATAGCAAACAAACAATTT+TGG 0.195592 1.1:-46229287 None:intergenic
TTTCGGAAGACTGAACATTT+TGG 0.262861 1.1:-46228417 None:intergenic
GAAGCTTCCTCCGCTGAAAC+TGG 0.270970 1.1:+46227931 MS.gene056842:CDS
GTATATCTTTCTGAACTAAT+TGG 0.279231 1.1:+46229264 MS.gene056842:CDS
TCCTCATCTACATCAATAAA+TGG 0.282055 1.1:+46228685 MS.gene056842:CDS
CAAATGCAGCATGGAGTATT+AGG 0.309280 1.1:+46229189 MS.gene056842:CDS
TTCATTGATGCGAAGTGATT+TGG 0.314477 1.1:+46228468 MS.gene056842:CDS
TTCCCGGCCTCTGATATTCT+TGG 0.322131 1.1:-46228223 None:intergenic
TTTGAATGGGTTCTAATGAT+TGG 0.331451 1.1:-46228522 None:intergenic
AATGTTCATCAAGTAAATTT+GGG 0.332717 1.1:+46228491 MS.gene056842:CDS
CTAACGTTGACAGCAGTAAA+AGG 0.334602 1.1:+46228299 MS.gene056842:CDS
TTACTGCTGTCAACGTTAGA+AGG 0.345198 1.1:-46228295 None:intergenic
AATGTCAGTGGTTCTAGTTT+TGG 0.355133 1.1:+46229114 MS.gene056842:CDS
TCACAAAGGTCTGGAAGTTC+TGG 0.355191 1.1:-46231521 None:intergenic
TCCCTCTCCTTTGATGATCT+CGG 0.360706 1.1:-46231207 None:intergenic
CTCTCTGGGCCAGCACCAAC+TGG 0.361010 1.1:+46228961 MS.gene056842:CDS
GTCACTGATGCTAGGAGATC+AGG 0.362583 1.1:+46228271 MS.gene056842:CDS
AAGAGACCTATGTATATCTA+AGG 0.380607 1.1:+46228153 MS.gene056842:CDS
TTCAAGTTTATTCCATCTGC+AGG 0.380968 1.1:-46228931 None:intergenic
AACTTTGGACTTGTTCCATC+TGG 0.386270 1.1:-46228040 None:intergenic
GCAGTTGCAGAAAATGAAAC+AGG 0.388859 1.1:+46228442 MS.gene056842:CDS
AGGATATATCTGTCCAGTTC+AGG 0.393900 1.1:+46227884 MS.gene056842:CDS
TTAGTTATGTACCTTGCTGC+TGG 0.394633 1.1:-46229522 None:intergenic
GCAGTTGATTGGTGGACTTT+TGG 0.396090 1.1:+46231239 MS.gene056842:CDS
AACTTGAAGAGCGTGCTCTC+TGG 0.398133 1.1:+46228946 MS.gene056842:CDS
CGAGGTACACCCATTGTCAT+TGG 0.406906 1.1:-46228082 None:intergenic
TCCCTTTCAGTTTGTGCCCT+AGG 0.407081 1.1:-46229351 None:intergenic
ATCTCCAATGGGCTCGTACT+CGG 0.410861 1.1:+46227808 None:intergenic
AAACTAACAAATGGGCTATC+GGG 0.412241 1.1:-46231359 None:intergenic
TTCATTATTAGAACCTTTGA+AGG 0.413043 1.1:-46231297 None:intergenic
GTACAATGTCTGTATCTTCC+CGG 0.414759 1.1:-46228239 None:intergenic
GTTCTTCGAGGGGCTTAATT+GGG 0.416732 1.1:+46231475 MS.gene056842:CDS
CCAGAATCAGAACCCTGCTT+TGG 0.419048 1.1:-46228790 None:intergenic
TATATCTAAGGCATCGGAAA+TGG 0.420286 1.1:+46228165 MS.gene056842:CDS
TCTCCAATGGGCTCGTACTC+GGG 0.421635 1.1:+46227809 None:intergenic
GCCCCAGGTGGTAAGAATCT+AGG 0.421684 1.1:-46231065 None:intergenic
ATCATTAGAACCCATTCAAA+TGG 0.423949 1.1:+46228525 MS.gene056842:CDS
GCAAGATCAAACTCATTTGT+TGG 0.426222 1.1:+46231164 MS.gene056842:CDS
TTTGTTTGCTATTAAAGTAA+TGG 0.428001 1.1:+46229296 MS.gene056842:CDS
CCCTCTCCTTTGATGATCTC+GGG 0.430280 1.1:-46231206 None:intergenic
CAACTCTACTTTACTTCCAT+TGG 0.431940 1.1:-46228587 None:intergenic
GACCTTTGTGAATTCGAGTT+GGG 0.431964 1.1:+46231533 MS.gene056842:CDS
CTTTGATAAGATCCCTTGCT+TGG 0.432685 1.1:-46231382 None:intergenic
TACCTCGATCCCCACGAGTT+GGG 0.435212 1.1:+46228098 MS.gene056842:CDS
TCTGTACCCAGTCGGTTCTC+AGG 0.437175 1.1:-46231422 None:intergenic
TTGAATGGGTTCTAATGATT+GGG 0.439666 1.1:-46228521 None:intergenic
CTTGCTTGGAAACTAACAAA+TGG 0.443465 1.1:-46231368 None:intergenic
AGTCCTAGATTCTTACCACC+TGG 0.445086 1.1:+46231062 MS.gene056842:CDS
AACTGAAATACCTCCGGTGC+TGG 0.448025 1.1:+46228327 MS.gene056842:CDS
TCTCGAACAAGAATGTTCTC+TGG 0.449274 1.1:-46230867 None:intergenic
AACCGACTGGGTACAGAGAA+AGG 0.450354 1.1:+46231428 MS.gene056842:CDS
GATACAGACATTGTACAATT+CGG 0.451481 1.1:+46228246 MS.gene056842:CDS
AAGGGAAATATTACGAATGC+TGG 0.453731 1.1:+46229368 MS.gene056842:CDS
ATGAAAAGGTTATCAAAGTC+AGG 0.459032 1.1:+46228193 MS.gene056842:CDS
TGCTGAAGTCCTTCTTGCGT+TGG 0.464637 1.1:+46230803 MS.gene056842:CDS
AGCTACACTATATCCTGAAC+TGG 0.471806 1.1:-46227897 None:intergenic
GAAACTAACAAATGGGCTAT+CGG 0.472767 1.1:-46231360 None:intergenic
TGGGATAGCACAACGTATTA+GGG 0.473231 1.1:-46231498 None:intergenic
TTGTTACAACCAGTTGGTGC+TGG 0.476500 1.1:-46228970 None:intergenic
AACTCGAATTCACAAAGGTC+TGG 0.477570 1.1:-46231530 None:intergenic
TATTTAGAGTGTACAACAAC+AGG 0.479866 1.1:+46231599 MS.gene056842:CDS
CGGAAATGGCTGCTATGAAA+AGG 0.484378 1.1:+46228179 MS.gene056842:CDS
AATTAGTTCAGAAAGATATA+CGG 0.484594 1.1:-46229262 None:intergenic
ACTTGAAGAGCGTGCTCTCT+GGG 0.489162 1.1:+46228947 MS.gene056842:CDS
AACATTCTTGTTCGAGAAGA+CGG 0.493896 1.1:+46230873 MS.gene056842:CDS
GACATGGAGCTGCAGTTGAT+TGG 0.495502 1.1:+46231228 MS.gene056842:CDS
TCCGCTGAAACTGGGATACA+AGG 0.498155 1.1:+46227940 MS.gene056842:CDS
CTTGTCATGGAGTATTGTCC+TGG 0.498365 1.1:+46229447 MS.gene056842:CDS
CTGCTGTTGTTACAACCAGT+TGG 0.502353 1.1:-46228976 None:intergenic
CAAGCAAGGGATCTTATCAA+AGG 0.504426 1.1:+46231383 MS.gene056842:CDS
TTTATTCCATCTGCAGGGCC+CGG 0.504556 1.1:-46228925 None:intergenic
ACCGACTGGGTACAGAGAAA+GGG 0.510368 1.1:+46231429 MS.gene056842:CDS
CTTTGATGATCTCGGGCGCT+AGG 0.512710 1.1:-46231199 None:intergenic
CACTTGTTTGCAAGAGATGT+TGG 0.516581 1.1:+46228869 MS.gene056842:CDS
TTCTCTGAGATCTTCGTCAA+GGG 0.516916 1.1:+46228003 MS.gene056842:CDS
TGAGCCGGTGACTTTGAAGC+AGG 0.518357 1.1:+46228126 MS.gene056842:CDS
GACTTGCTTTCTTCCAGCAC+CGG 0.520360 1.1:-46228340 None:intergenic
GCATAGAGTGTTGGAAGAAA+AGG 0.520558 1.1:-46229396 None:intergenic
TTGCTTGGAAACTAACAAAT+GGG 0.520604 1.1:-46231367 None:intergenic
ACGAGTTGGGATTTCTGAGC+CGG 0.520650 1.1:+46228111 MS.gene056842:CDS
TTGGAGTACTTGCACATGCT+CGG 0.524862 1.1:+46230822 MS.gene056842:CDS
CAAACAAGTGGAGTTGTAGC+AGG 0.526120 1.1:-46228856 None:intergenic
CTCCAAGAATATCAGAGGCC+GGG 0.526522 1.1:+46228221 MS.gene056842:CDS
CCGATGCCTTAGATATACAT+AGG 0.527023 1.1:-46228159 None:intergenic
TATGGTAGAACACCCTTCAA+AGG 0.528632 1.1:+46231284 MS.gene056842:CDS
CCCCTTTCTCTGTACCCAGT+CGG 0.530798 1.1:-46231430 None:intergenic
GCCTAGGGCACAAACTGAAA+GGG 0.531959 1.1:+46229350 MS.gene056842:CDS
AAACAACATCCGTTCTTCGA+GGG 0.532991 1.1:+46231464 MS.gene056842:CDS
TGCCTAGGGCACAAACTGAA+AGG 0.533660 1.1:+46229349 MS.gene056842:CDS
GAAGATGATTTCAGAAGTGT+CGG 0.534124 1.1:-46230945 None:intergenic
TGAGTTTGATCTTGCATCTG+TGG 0.534621 1.1:-46231156 None:intergenic
GGGTAAGAAGAAACCAAAGC+AGG 0.535267 1.1:+46228777 MS.gene056842:CDS
TGTTCTCTGGTTTCAAATCA+CGG 0.536426 1.1:-46230854 None:intergenic
CAAAGGTCTGGAAGTTCTGG+TGG 0.537172 1.1:-46231518 None:intergenic
AGACCTTTGTGAATTCGAGT+TGG 0.538308 1.1:+46231532 MS.gene056842:CDS
TGCACATGTACCAGAAACCT+TGG 0.539921 1.1:-46230982 None:intergenic
CTGGAAGAAAGCAAGTCGCT+TGG 0.540370 1.1:+46228346 MS.gene056842:CDS
CATTTGTTAGTTTCCAAGCA+AGG 0.540412 1.1:+46231369 MS.gene056842:CDS
CTTCCATTGGTGTTACAACA+AGG 0.541296 1.1:-46228574 None:intergenic
GTGGGCTCTGCCACAAGTTG+TGG 0.543584 1.1:-46231137 None:intergenic
CTGCATTTGAGCATCTCGTA+TGG 0.544030 1.1:-46229175 None:intergenic
ATAACACCGGGCCCTGCAGA+TGG 0.544715 1.1:+46228919 MS.gene056842:CDS
AAGCAAGGGATCTTATCAAA+GGG 0.546140 1.1:+46231384 MS.gene056842:CDS
ATTTGTTAGTTTCCAAGCAA+GGG 0.546510 1.1:+46231370 MS.gene056842:CDS
TCTCCAAGAATATCAGAGGC+CGG 0.547265 1.1:+46228220 MS.gene056842:CDS
CAACATCTCTTGCAAACAAG+TGG 0.549095 1.1:-46228868 None:intergenic
CAGATCATTGCCACAACTTG+TGG 0.550134 1.1:+46231127 MS.gene056842:CDS
CTTGTGAAATTGTTGAAGTG+AGG 0.551186 1.1:+46227834 MS.gene056842:CDS
CATGTACCAGAAACCTTGGC+AGG 0.552486 1.1:-46230978 None:intergenic
GCCATTTATTGATGTAGATG+AGG 0.552846 1.1:-46228686 None:intergenic
TCAAGTTTATTCCATCTGCA+GGG 0.553310 1.1:-46228930 None:intergenic
CCACCTTGTTGTAACACCAA+TGG 0.553522 1.1:+46228571 MS.gene056842:CDS
CACGAAGGAAGAAGATGCCT+AGG 0.553678 1.1:+46229334 MS.gene056842:CDS
GTCCTAGATTCTTACCACCT+GGG 0.554174 1.1:+46231063 MS.gene056842:CDS
AAACTTGGTTGTGGAGACAT+TGG 0.554545 1.1:+46229237 MS.gene056842:CDS
TCACTGATGCTAGGAGATCA+GGG 0.558232 1.1:+46228272 MS.gene056842:CDS
AAGCTTCCTCCGCTGAAACT+GGG 0.558427 1.1:+46227932 MS.gene056842:CDS
TACCACCTGGGGCAAAAGCA+AGG 0.560142 1.1:+46231075 MS.gene056842:CDS
TAACGTCACACCTGAGTGAA+AGG 0.560894 1.1:-46230920 None:intergenic
TTTCTCTGAGATCTTCGTCA+AGG 0.561091 1.1:+46228002 MS.gene056842:CDS
ATGGAGCTGCAGTTGATTGG+TGG 0.561888 1.1:+46231231 MS.gene056842:CDS
AAATCTGTCATGTCTTGTCA+TGG 0.562494 1.1:+46229434 MS.gene056842:CDS
ATCATCAAAGGAGAGGGACA+TGG 0.563595 1.1:+46231212 MS.gene056842:CDS
GAGTTTGATCTTGCATCTGT+GGG 0.564013 1.1:-46231155 None:intergenic
GATCGCACAGTCACAAAGCA+AGG 0.565695 1.1:+46231568 MS.gene056842:CDS
CAATTAAGCCCCTCGAAGAA+CGG 0.565981 1.1:-46231473 None:intergenic
TAAACAACATCCGTTCTTCG+AGG 0.566000 1.1:+46231463 MS.gene056842:CDS
ATTCGGTTGTCACTGATGCT+AGG 0.566463 1.1:+46228263 MS.gene056842:CDS
GTACCTCGATCCCCACGAGT+TGG 0.569241 1.1:+46228097 MS.gene056842:CDS
AAGCATGCAACTTGACAAGA+TGG 0.570439 1.1:-46231038 None:intergenic
AACAACATCCGTTCTTCGAG+GGG 0.572629 1.1:+46231465 MS.gene056842:CDS
CAAAGTTCAAAGAGTAGCCA+AGG 0.577202 1.1:+46229054 MS.gene056842:CDS
TAAAGAGCCTGAGAACCGAC+TGG 0.577374 1.1:+46231415 MS.gene056842:CDS
ACTGACATTACTCTCGTCGC+TGG 0.577572 1.1:-46229100 None:intergenic
CCCGAGATCATCAAAGGAGA+GGG 0.579283 1.1:+46231206 MS.gene056842:CDS
TACTACTGCTGTAGTCACCT+TGG 0.579611 1.1:-46229071 None:intergenic
TACAACAACAGGTGGACAAG+TGG 0.580591 1.1:+46231610 MS.gene056842:CDS
AACTAACAAATGGGCTATCG+GGG 0.581176 1.1:-46231358 None:intergenic
TTCTGATATAGATCCTGCCA+AGG 0.581336 1.1:+46230965 MS.gene056842:CDS
AATGCCTGCTTCAAAGTCAC+CGG 0.582267 1.1:-46228130 None:intergenic
GGCTCAGAAATCCCAACTCG+TGG 0.584426 1.1:-46228109 None:intergenic
TTGTGAAATTGTTGAAGTGA+GGG 0.584796 1.1:+46227835 MS.gene056842:CDS
TTGCTTTCTTCCAGCACCGG+AGG 0.586528 1.1:-46228337 None:intergenic
TCCTTGTATCCCAGTTTCAG+CGG 0.586814 1.1:-46227941 None:intergenic
AATAAAGCATCTACACGGAA+AGG 0.586972 1.1:+46228643 MS.gene056842:CDS
CCTATGTATATCTAAGGCAT+CGG 0.587384 1.1:+46228159 MS.gene056842:CDS
GAGTTCAACTGAAATACCTC+CGG 0.587544 1.1:+46228321 MS.gene056842:CDS
GCTCAGAAATCCCAACTCGT+GGG 0.587632 1.1:-46228108 None:intergenic
ATCCCAACTCGTGGGGATCG+AGG 0.588163 1.1:-46228100 None:intergenic
GCAAGTACTCCAACGCAAGA+AGG 0.591404 1.1:-46230812 None:intergenic
CAAGATGGTTCAATGCAGAA+TGG 0.593437 1.1:-46231023 None:intergenic
GTAAACTGTGCATAGAGTGT+TGG 0.596126 1.1:-46229405 None:intergenic
CAGTTGCAGAAAATGAAACA+GGG 0.598118 1.1:+46228443 MS.gene056842:CDS
GTTCCCGAGTACGAGCCCAT+TGG 0.599638 1.1:-46227812 None:intergenic
GCCCGAGATCATCAAAGGAG+AGG 0.600003 1.1:+46231205 MS.gene056842:CDS
TTATTTGCTTCATTTGACTG+AGG 0.604064 1.1:-46228823 None:intergenic
TAGCAAAGGTAATATAACAC+CGG 0.604288 1.1:+46228906 MS.gene056842:CDS
CAATAGGCCTCACATGTCAA+AGG 0.604784 1.1:+46229137 MS.gene056842:CDS
TCATTATTAGAACCTTTGAA+GGG 0.605401 1.1:-46231296 None:intergenic
AAGATGATTTCAGAAGTGTC+GGG 0.605932 1.1:-46230944 None:intergenic
GATTTGAGCTATCTACCAGA+TGG 0.608922 1.1:+46228025 MS.gene056842:CDS
CTAGCGCCCGAGATCATCAA+AGG 0.609684 1.1:+46231200 MS.gene056842:CDS
GTTCTACGTCAGAAACAGCT+TGG 0.610473 1.1:+46229483 MS.gene056842:CDS
CTAAAATCCTTTGACATGTG+AGG 0.614502 1.1:-46229144 None:intergenic
AGAACATGAAGATCTCCTCC+AGG 0.614542 1.1:-46229465 None:intergenic
ATGTTCATCAAGTAAATTTG+GGG 0.621811 1.1:+46228492 MS.gene056842:CDS
TCCTAGATTCTTACCACCTG+GGG 0.624909 1.1:+46231064 MS.gene056842:CDS
AGCAAAGGTAATATAACACC+GGG 0.625939 1.1:+46228907 MS.gene056842:CDS
CGAGATGCTCAAATGCAGCA+TGG 0.626391 1.1:+46229180 MS.gene056842:CDS
CTCAGAAATCCCAACTCGTG+GGG 0.627023 1.1:-46228107 None:intergenic
CCGACTGGGTACAGAGAAAG+GGG 0.629774 1.1:+46231430 MS.gene056842:CDS
AGCTTCTCCAAGAATATCAG+AGG 0.631647 1.1:+46228216 MS.gene056842:CDS
GGTAAGAAGAAACCAAAGCA+GGG 0.633251 1.1:+46228778 MS.gene056842:CDS
TTGTATCCCAGTTTCAGCGG+AGG 0.645256 1.1:-46227938 None:intergenic
TTAGAGTGTACAACAACAGG+TGG 0.645501 1.1:+46231602 MS.gene056842:CDS
ATCGCACAGTCACAAAGCAA+GGG 0.646722 1.1:+46231569 MS.gene056842:CDS
AAAGAGCCTGAGAACCGACT+GGG 0.650422 1.1:+46231416 MS.gene056842:CDS
TTAGTACAGTGAAAGATGCA+AGG 0.651962 1.1:+46227864 MS.gene056842:CDS
GTCATGGAGTATTGTCCTGG+AGG 0.654376 1.1:+46229450 MS.gene056842:CDS
TGTGAAATAGAAAATAGCAA+AGG 0.655331 1.1:+46228892 MS.gene056842:CDS
ACGAAGGAAGAAGATGCCTA+GGG 0.660068 1.1:+46229335 MS.gene056842:CDS
AAAGGTCTGGAAGTTCTGGT+GGG 0.661777 1.1:-46231517 None:intergenic
GCACAGTCACAAAGCAAGGG+TGG 0.674594 1.1:+46231572 MS.gene056842:CDS
CTCCCAACTCGAATTCACAA+AGG 0.676959 1.1:-46231535 None:intergenic
TAGGAAATAAAGCATCTACA+CGG 0.687698 1.1:+46228638 MS.gene056842:CDS
AGTTGCAGAAAATGAAACAG+GGG 0.694625 1.1:+46228444 MS.gene056842:CDS
CCATTGGTGTTACAACAAGG+TGG 0.712169 1.1:-46228571 None:intergenic
AGCGACGAGAGTAATGTCAG+TGG 0.730559 1.1:+46229102 MS.gene056842:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAGGATCTATAATAAA+AGG + chr1.1:46230111-46230130 MS.gene056842:intron 15.0%
!!! CTTTATTTCCTAATTTTTTA+GGG - chr1.1:46228630-46228649 None:intergenic 15.0%
!!! TTGAATTTTGATATGTTTAT+AGG + chr1.1:46229706-46229725 MS.gene056842:intron 15.0%
!!! TTTATTTCCTAATTTTTTAG+GGG - chr1.1:46228629-46228648 None:intergenic 15.0%
!! AATGTTCATCAAGTAAATTT+GGG + chr1.1:46228491-46228510 MS.gene056842:CDS 20.0%
!! AATTAGTTCAGAAAGATATA+CGG - chr1.1:46229265-46229284 None:intergenic 20.0%
!! ATCATAAAAAACAAGAGTTT+GGG + chr1.1:46228757-46228776 MS.gene056842:CDS 20.0%
!! TAATAAAAGGTTATATGTCT+AGG + chr1.1:46230124-46230143 MS.gene056842:intron 20.0%
!!! ATTTGTTTTTCCATTTGAAT+GGG - chr1.1:46228538-46228557 None:intergenic 20.0%
!!! GCTTTATTTCCTAATTTTTT+AGG - chr1.1:46228631-46228650 None:intergenic 20.0%
!!! TAATAGCAAACAAACAATTT+TGG - chr1.1:46229290-46229309 None:intergenic 20.0%
!!! TACACTTAGCTAAATTTTTA+AGG + chr1.1:46229975-46229994 MS.gene056842:intron 20.0%
!!! TTTGTTTGCTATTAAAGTAA+TGG + chr1.1:46229296-46229315 MS.gene056842:CDS 20.0%
! ACATGAAAACACATATAGAT+TGG + chr1.1:46230731-46230750 MS.gene056842:intron 25.0%
! AGTCAATAAAATTGTAGTGA+TGG - chr1.1:46230502-46230521 None:intergenic 25.0%
! ATGTTCATCAAGTAAATTTG+GGG + chr1.1:46228492-46228511 MS.gene056842:CDS 25.0%
! GAACTTTCAGAATTATTTGT+TGG - chr1.1:46230328-46230347 None:intergenic 25.0%
! GAATGTTCATCAAGTAAATT+TGG + chr1.1:46228490-46228509 MS.gene056842:CDS 25.0%
! GATCATAAAAAACAAGAGTT+TGG + chr1.1:46228756-46228775 MS.gene056842:CDS 25.0%
! GTATATCTTTCTGAACTAAT+TGG + chr1.1:46229264-46229283 MS.gene056842:CDS 25.0%
! TAAATAAAACAATTGCTCAC+TGG + chr1.1:46230419-46230438 MS.gene056842:intron 25.0%
! TCAAACTTAAGGTTAAAGTA+TGG + chr1.1:46230017-46230036 MS.gene056842:intron 25.0%
! TCATTATTAGAACCTTTGAA+GGG - chr1.1:46231299-46231318 None:intergenic 25.0%
! TGTGAAATAGAAAATAGCAA+AGG + chr1.1:46228892-46228911 MS.gene056842:CDS 25.0%
! TTAAAAAAGCCAATGACAAT+GGG + chr1.1:46228073-46228092 MS.gene056842:CDS 25.0%
! TTCATTATTAGAACCTTTGA+AGG - chr1.1:46231300-46231319 None:intergenic 25.0%
!! CATTCTCATCAATCATATTT+TGG + chr1.1:46229645-46229664 MS.gene056842:intron 25.0%
!!! AAATTTTTAAGGTCTGAGTT+AGG + chr1.1:46229986-46230005 MS.gene056842:intron 25.0%
!!! AGTAATGGACAATGAATTTT+TGG + chr1.1:46229311-46229330 MS.gene056842:CDS 25.0%
!!! CATTTGTTTTTCCATTTGAA+TGG - chr1.1:46228539-46228558 None:intergenic 25.0%
!!! TTAGGATTTTGTTTTCCATT+TGG + chr1.1:46229566-46229585 MS.gene056842:intron 25.0%
!!! TTCAATCTTTTGAAGAAACT+TGG + chr1.1:46229222-46229241 MS.gene056842:CDS 25.0%
AAAAAATTGCATGCACATAG+GGG - chr1.1:46230573-46230592 None:intergenic 30.0%
AAGAGACCTATGTATATCTA+AGG + chr1.1:46228153-46228172 MS.gene056842:CDS 30.0%
AGGCAAGATTTCATCATTAT+AGG - chr1.1:46229943-46229962 None:intergenic 30.0%
ATCATTAGAACCCATTCAAA+TGG + chr1.1:46228525-46228544 MS.gene056842:CDS 30.0%
ATGAAAAGGTTATCAAAGTC+AGG + chr1.1:46228193-46228212 MS.gene056842:CDS 30.0%
ATGATACAAATGTGACCAAA+TGG - chr1.1:46229584-46229603 None:intergenic 30.0%
ATGTAAACTCATGGAACAAT+GGG + chr1.1:46230045-46230064 MS.gene056842:intron 30.0%
CAAAAAATTGCATGCACATA+GGG - chr1.1:46230574-46230593 None:intergenic 30.0%
CATAACTAAGAACTACTGTT+CGG + chr1.1:46229536-46229555 MS.gene056842:intron 30.0%
CTACTGTTCGGTAATATATT+AGG + chr1.1:46229548-46229567 MS.gene056842:intron 30.0%
GACAAAATTGCAGATCAAAA+GGG - chr1.1:46230684-46230703 None:intergenic 30.0%
GATACAGACATTGTACAATT+CGG + chr1.1:46228246-46228265 MS.gene056842:CDS 30.0%
GATTCTTCCCCTAAAAAATT+AGG + chr1.1:46228619-46228638 MS.gene056842:CDS 30.0%
GTTAAAAAAGCCAATGACAA+TGG + chr1.1:46228072-46228091 MS.gene056842:CDS 30.0%
GTTGCAAAAGTGAAAAAGAA+TGG + chr1.1:46229003-46229022 MS.gene056842:CDS 30.0%
TAGCAAAGGTAATATAACAC+CGG + chr1.1:46228906-46228925 MS.gene056842:CDS 30.0%
TATGTAAACTCATGGAACAA+TGG + chr1.1:46230044-46230063 MS.gene056842:intron 30.0%
TCAAAAAATTGCATGCACAT+AGG - chr1.1:46230575-46230594 None:intergenic 30.0%
TCCTCATCTACATCAATAAA+TGG + chr1.1:46228685-46228704 MS.gene056842:CDS 30.0%
TGACAAAATTGCAGATCAAA+AGG - chr1.1:46230685-46230704 None:intergenic 30.0%
TTATTTGCTTCATTTGACTG+AGG - chr1.1:46228826-46228845 None:intergenic 30.0%
TTCATGTAAAGTAGAAGGTT+TGG - chr1.1:46230718-46230737 None:intergenic 30.0%
TTGCTTGGAAACTAACAAAT+GGG - chr1.1:46231370-46231389 None:intergenic 30.0%
TTGTGAAATTGTTGAAGTGA+GGG + chr1.1:46227835-46227854 MS.gene056842:CDS 30.0%
! AATAATTCTGAAAGTTCCCT+AGG + chr1.1:46230331-46230350 MS.gene056842:intron 30.0%
! ACATGTCAAAGGATTTTAGA+TGG + chr1.1:46229148-46229167 MS.gene056842:CDS 30.0%
! AGGCTTATTTCTCAAACTTA+AGG + chr1.1:46230006-46230025 MS.gene056842:intron 30.0%
! ATGGTTTGTATGTAAACTCA+TGG + chr1.1:46230036-46230055 MS.gene056842:intron 30.0%
! ATTTGTTAGTTTCCAAGCAA+GGG + chr1.1:46231370-46231389 MS.gene056842:CDS 30.0%
! ATTTTCTGCAACTGCAATTT+CGG - chr1.1:46228437-46228456 None:intergenic 30.0%
! GTGTTTTCATGTAAAGTAGA+AGG - chr1.1:46230723-46230742 None:intergenic 30.0%
! TAGGAAATAAAGCATCTACA+CGG + chr1.1:46228638-46228657 MS.gene056842:CDS 30.0%
! TATTTAGAGTGTACAACAAC+AGG + chr1.1:46231599-46231618 MS.gene056842:CDS 30.0%
! TTGAATGGGTTCTAATGATT+GGG - chr1.1:46228524-46228543 None:intergenic 30.0%
! TTTCTGTACGAGCTTTTATA+TGG + chr1.1:46231266-46231285 MS.gene056842:CDS 30.0%
! TTTGAATGGGTTCTAATGAT+TGG - chr1.1:46228525-46228544 None:intergenic 30.0%
!! TTATGATCGATTTTACTGCT+CGG - chr1.1:46228744-46228763 None:intergenic 30.0%
!!! ATTTTGGCTCAATACACTTT+TGG - chr1.1:46228404-46228423 None:intergenic 30.0%
AAATCTGTCATGTCTTGTCA+TGG + chr1.1:46229434-46229453 MS.gene056842:CDS 35.0%
AACAAACAATTGCTTCTCCT+AGG - chr1.1:46230351-46230370 None:intergenic 35.0%
AACATTCTTGTTCGAGAAGA+CGG + chr1.1:46230873-46230892 MS.gene056842:CDS 35.0%
AAGCAAGGGATCTTATCAAA+GGG + chr1.1:46231384-46231403 MS.gene056842:CDS 35.0%
AAGGGAAATATTACGAATGC+TGG + chr1.1:46229368-46229387 MS.gene056842:CDS 35.0%
ACAAACAATTGCTTCTCCTA+GGG - chr1.1:46230350-46230369 None:intergenic 35.0%
ACGTAAAACCTGCATATACA+AGG - chr1.1:46230783-46230802 None:intergenic 35.0%
AGCAAAGGTAATATAACACC+GGG + chr1.1:46228907-46228926 MS.gene056842:CDS 35.0%
AGTGAGTGGATACTTAACAA+CGG - chr1.1:46229898-46229917 None:intergenic 35.0%
AGTTGCAGAAAATGAAACAG+GGG + chr1.1:46228444-46228463 MS.gene056842:CDS 35.0%
ATGATGAAATCTTGCCTGTA+CGG + chr1.1:46229946-46229965 MS.gene056842:intron 35.0%
CAACTCTACTTTACTTCCAT+TGG - chr1.1:46228590-46228609 None:intergenic 35.0%
CAAGTTGCAAATTGTTTCGA+TGG + chr1.1:46230641-46230660 MS.gene056842:intron 35.0%
CAGTTGCAGAAAATGAAACA+GGG + chr1.1:46228443-46228462 MS.gene056842:CDS 35.0%
CTAAAATCCTTTGACATGTG+AGG - chr1.1:46229147-46229166 None:intergenic 35.0%
CTTGCTTGGAAACTAACAAA+TGG - chr1.1:46231371-46231390 None:intergenic 35.0%
CTTGTGAAATTGTTGAAGTG+AGG + chr1.1:46227834-46227853 MS.gene056842:CDS 35.0%
GCAAGATCAAACTCATTTGT+TGG + chr1.1:46231164-46231183 MS.gene056842:CDS 35.0%
GCCATTTATTGATGTAGATG+AGG - chr1.1:46228689-46228708 None:intergenic 35.0%
TCAAGTTTATTCCATCTGCA+GGG - chr1.1:46228933-46228952 None:intergenic 35.0%
TGACTTTATGTAGATTGCAC+TGG + chr1.1:46230517-46230536 MS.gene056842:intron 35.0%
TTAGTACAGTGAAAGATGCA+AGG + chr1.1:46227864-46227883 MS.gene056842:CDS 35.0%
TTCATTGATGCGAAGTGATT+TGG + chr1.1:46228468-46228487 MS.gene056842:CDS 35.0%
! AATAAAGCATCTACACGGAA+AGG + chr1.1:46228643-46228662 MS.gene056842:CDS 35.0%
! CATTTGTTAGTTTCCAAGCA+AGG + chr1.1:46231369-46231388 MS.gene056842:CDS 35.0%
! CCTATGTATATCTAAGGCAT+CGG + chr1.1:46228159-46228178 MS.gene056842:CDS 35.0%
! GAAGATGATTTCAGAAGTGT+CGG - chr1.1:46230948-46230967 None:intergenic 35.0%
! TCGCAATTAAGGCAGATTTT+TGG + chr1.1:46230297-46230316 MS.gene056842:intron 35.0%
! TGTTCTCTGGTTTCAAATCA+CGG - chr1.1:46230857-46230876 None:intergenic 35.0%
! TTAGGGGAAGAATCTTTTTC+AGG - chr1.1:46228613-46228632 None:intergenic 35.0%
! TTCAAGTTTATTCCATCTGC+AGG - chr1.1:46228934-46228953 None:intergenic 35.0%
! TTTAACGCGCTTTTCAACTT+TGG - chr1.1:46228058-46228077 None:intergenic 35.0%
! TTTCGGAAGACTGAACATTT+TGG - chr1.1:46228420-46228439 None:intergenic 35.0%
!! AAACTAACAAATGGGCTATC+GGG - chr1.1:46231362-46231381 None:intergenic 35.0%
!! AAGATGATTTCAGAAGTGTC+GGG - chr1.1:46230947-46230966 None:intergenic 35.0%
!! AATAATGGGTGGCTCAATAA+AGG + chr1.1:46230096-46230115 MS.gene056842:intron 35.0%
!! CTTTTGAAGAAACTTGGTTG+TGG + chr1.1:46229228-46229247 MS.gene056842:CDS 35.0%
!! GAAACTAACAAATGGGCTAT+CGG - chr1.1:46231363-46231382 None:intergenic 35.0%
!! TATATCTAAGGCATCGGAAA+TGG + chr1.1:46228165-46228184 MS.gene056842:CDS 35.0%
!! TATGATCGATTTTACTGCTC+GGG - chr1.1:46228743-46228762 None:intergenic 35.0%
!!! AATGTCAGTGGTTCTAGTTT+TGG + chr1.1:46229114-46229133 MS.gene056842:CDS 35.0%
!!! ACAATGAATTTTTGGCACGA+AGG + chr1.1:46229319-46229338 MS.gene056842:CDS 35.0%
!!! CATATTTTGGCATGTGTTTC+TGG + chr1.1:46229658-46229677 MS.gene056842:intron 35.0%
AAACAACATCCGTTCTTCGA+GGG + chr1.1:46231464-46231483 MS.gene056842:CDS 40.0%
AAACTTGGTTGTGGAGACAT+TGG + chr1.1:46229237-46229256 MS.gene056842:CDS 40.0%
AACTCGAATTCACAAAGGTC+TGG - chr1.1:46231533-46231552 None:intergenic 40.0%
AAGCATGCAACTTGACAAGA+TGG - chr1.1:46231041-46231060 None:intergenic 40.0%
AAGTATCCACTCACTCTTTC+TGG + chr1.1:46229903-46229922 MS.gene056842:intron 40.0%
AATTCAAGTGTGCTGAGTTG+AGG - chr1.1:46229862-46229881 None:intergenic 40.0%
AGACCTTTGTGAATTCGAGT+TGG + chr1.1:46231532-46231551 MS.gene056842:CDS 40.0%
AGCTACACTATATCCTGAAC+TGG - chr1.1:46227900-46227919 None:intergenic 40.0%
AGCTTCTCCAAGAATATCAG+AGG + chr1.1:46228216-46228235 MS.gene056842:CDS 40.0%
AGGATATATCTGTCCAGTTC+AGG + chr1.1:46227884-46227903 MS.gene056842:CDS 40.0%
AGTACCATTGCAATGAAGAC+AGG + chr1.1:46230236-46230255 MS.gene056842:intron 40.0%
ATTATTGCACACCAAATGCG+TGG - chr1.1:46230082-46230101 None:intergenic 40.0%
CAAAACCTCATTGAATGCAC+TGG - chr1.1:46229689-46229708 None:intergenic 40.0%
CAAAGTTCAAAGAGTAGCCA+AGG + chr1.1:46229054-46229073 MS.gene056842:CDS 40.0%
CAACATCTCTTGCAAACAAG+TGG - chr1.1:46228871-46228890 None:intergenic 40.0%
CAAGATGGTTCAATGCAGAA+TGG - chr1.1:46231026-46231045 None:intergenic 40.0%
CAAGCAAGGGATCTTATCAA+AGG + chr1.1:46231383-46231402 MS.gene056842:CDS 40.0%
CACTTGTTTGCAAGAGATGT+TGG + chr1.1:46228869-46228888 MS.gene056842:CDS 40.0%
CCGATGCCTTAGATATACAT+AGG - chr1.1:46228162-46228181 None:intergenic 40.0%
CTAACGTTGACAGCAGTAAA+AGG + chr1.1:46228299-46228318 MS.gene056842:CDS 40.0%
CTACTGTCTACTAAACAGTG+TGG - chr1.1:46230617-46230636 None:intergenic 40.0%
CTTAATTGCGACTAACTCTG+CGG - chr1.1:46230288-46230307 None:intergenic 40.0%
CTTTGATAAGATCCCTTGCT+TGG - chr1.1:46231385-46231404 None:intergenic 40.0%
GAGTTCAACTGAAATACCTC+CGG + chr1.1:46228321-46228340 MS.gene056842:CDS 40.0%
GAGTTTGATCTTGCATCTGT+GGG - chr1.1:46231158-46231177 None:intergenic 40.0%
GATTTGAGCTATCTACCAGA+TGG + chr1.1:46228025-46228044 MS.gene056842:CDS 40.0%
GCAGTTGCAGAAAATGAAAC+AGG + chr1.1:46228442-46228461 MS.gene056842:CDS 40.0%
GGTAAGAAGAAACCAAAGCA+GGG + chr1.1:46228778-46228797 MS.gene056842:CDS 40.0%
GTAAACTGTGCATAGAGTGT+TGG - chr1.1:46229408-46229427 None:intergenic 40.0%
GTACAATGTCTGTATCTTCC+CGG - chr1.1:46228242-46228261 None:intergenic 40.0%
TAAACAACATCCGTTCTTCG+AGG + chr1.1:46231463-46231482 MS.gene056842:CDS 40.0%
TATGCCTGTCTTCATTGCAA+TGG - chr1.1:46230243-46230262 None:intergenic 40.0%
TATGGTAGAACACCCTTCAA+AGG + chr1.1:46231284-46231303 MS.gene056842:CDS 40.0%
TCTACTAAACAGTGTGGAAC+TGG - chr1.1:46230611-46230630 None:intergenic 40.0%
TCTCGAACAAGAATGTTCTC+TGG - chr1.1:46230870-46230889 None:intergenic 40.0%
TGAGTTTGATCTTGCATCTG+TGG - chr1.1:46231159-46231178 None:intergenic 40.0%
TGATGAAATCTTGCCTGTAC+GGG + chr1.1:46229947-46229966 MS.gene056842:intron 40.0%
TGGGATAGCACAACGTATTA+GGG - chr1.1:46231501-46231520 None:intergenic 40.0%
TTACTGCTGTCAACGTTAGA+AGG - chr1.1:46228298-46228317 None:intergenic 40.0%
TTAGAGTGTACAACAACAGG+TGG + chr1.1:46231602-46231621 MS.gene056842:CDS 40.0%
TTAGTTATGTACCTTGCTGC+TGG - chr1.1:46229525-46229544 None:intergenic 40.0%
TTCTGATATAGATCCTGCCA+AGG + chr1.1:46230965-46230984 MS.gene056842:CDS 40.0%
TTTAGCCAGTGCATTCAATG+AGG + chr1.1:46229681-46229700 MS.gene056842:intron 40.0%
! AACTTTGGACTTGTTCCATC+TGG - chr1.1:46228043-46228062 None:intergenic 40.0%
! ATTCAAGTGTGCTGAGTTGA+GGG - chr1.1:46229861-46229880 None:intergenic 40.0%
! CAAATGCAGCATGGAGTATT+AGG + chr1.1:46229189-46229208 MS.gene056842:CDS 40.0%
! GACCTTTGTGAATTCGAGTT+GGG + chr1.1:46231533-46231552 MS.gene056842:CDS 40.0%
! GAGATTTTGCAACACGACAT+TGG - chr1.1:46231333-46231352 None:intergenic 40.0%
!! AACTAACAAATGGGCTATCG+GGG - chr1.1:46231361-46231380 None:intergenic 40.0%
!! ACGCATTTGGTGTGCAATAA+TGG + chr1.1:46230081-46230100 MS.gene056842:intron 40.0%
!! ACTCATGGAACAATGGGTTA+TGG + chr1.1:46230051-46230070 MS.gene056842:intron 40.0%
!! ATGATCGATTTTACTGCTCG+GGG - chr1.1:46228742-46228761 None:intergenic 40.0%
!! ATTTGGTGTGCAATAATGGG+TGG + chr1.1:46230085-46230104 MS.gene056842:intron 40.0%
!! CGCATTTGGTGTGCAATAAT+GGG + chr1.1:46230082-46230101 MS.gene056842:intron 40.0%
!! CTCATGGAACAATGGGTTAT+GGG + chr1.1:46230052-46230071 MS.gene056842:intron 40.0%
!! CTGATTTTGACCTTTCACTC+AGG + chr1.1:46230910-46230929 MS.gene056842:CDS 40.0%
!! CTTCCATTGGTGTTACAACA+AGG - chr1.1:46228577-46228596 None:intergenic 40.0%
!! GCATAGAGTGTTGGAAGAAA+AGG - chr1.1:46229399-46229418 None:intergenic 40.0%
!! TTCTCTGAGATCTTCGTCAA+GGG + chr1.1:46228003-46228022 MS.gene056842:CDS 40.0%
!! TTTCTCTGAGATCTTCGTCA+AGG + chr1.1:46228002-46228021 MS.gene056842:CDS 40.0%
!!! GTGGTTCTAGTTTTGGCAAT+AGG + chr1.1:46229121-46229140 MS.gene056842:CDS 40.0%
AACAACATCCGTTCTTCGAG+GGG + chr1.1:46231465-46231484 MS.gene056842:CDS 45.0%
AATGCCTGCTTCAAAGTCAC+CGG - chr1.1:46228133-46228152 None:intergenic 45.0%
ACGAAGGAAGAAGATGCCTA+GGG + chr1.1:46229335-46229354 MS.gene056842:CDS 45.0%
AGAACATGAAGATCTCCTCC+AGG - chr1.1:46229468-46229487 None:intergenic 45.0%
AGTCCTAGATTCTTACCACC+TGG + chr1.1:46231062-46231081 MS.gene056842:CDS 45.0%
ATAGATCCTGCCAAGGTTTC+TGG + chr1.1:46230972-46230991 MS.gene056842:CDS 45.0%
ATCATCAAAGGAGAGGGACA+TGG + chr1.1:46231212-46231231 MS.gene056842:CDS 45.0%
ATCCACTCACTCTTTCTGGA+TGG + chr1.1:46229907-46229926 MS.gene056842:intron 45.0%
ATCCATCCAGAAAGAGTGAG+TGG - chr1.1:46229912-46229931 None:intergenic 45.0%
ATCGCACAGTCACAAAGCAA+GGG + chr1.1:46231569-46231588 MS.gene056842:CDS 45.0%
ATTCGGTTGTCACTGATGCT+AGG + chr1.1:46228263-46228282 MS.gene056842:CDS 45.0%
CAAACAAGTGGAGTTGTAGC+AGG - chr1.1:46228859-46228878 None:intergenic 45.0%
CAATAGGCCTCACATGTCAA+AGG + chr1.1:46229137-46229156 MS.gene056842:CDS 45.0%
CAATTAAGCCCCTCGAAGAA+CGG - chr1.1:46231476-46231495 None:intergenic 45.0%
CAGATCATTGCCACAACTTG+TGG + chr1.1:46231127-46231146 MS.gene056842:CDS 45.0%
CCAGAGAACCTTGTATATGC+AGG + chr1.1:46230772-46230791 MS.gene056842:intron 45.0%
CCTGCATATACAAGGTTCTC+TGG - chr1.1:46230775-46230794 None:intergenic 45.0%
CGCACTGTTGCAGATTGTAT+AGG + chr1.1:46229813-46229832 MS.gene056842:intron 45.0%
CGCAGAGTTAGTCGCAATTA+AGG + chr1.1:46230286-46230305 MS.gene056842:intron 45.0%
CGGAAATGGCTGCTATGAAA+AGG + chr1.1:46228179-46228198 MS.gene056842:CDS 45.0%
CTCCCAACTCGAATTCACAA+AGG - chr1.1:46231538-46231557 None:intergenic 45.0%
CTGCATTTGAGCATCTCGTA+TGG - chr1.1:46229178-46229197 None:intergenic 45.0%
CTGCTGTTGTTACAACCAGT+TGG - chr1.1:46228979-46228998 None:intergenic 45.0%
GCACACTTAAAGCGAGGATT+GGG + chr1.1:46230179-46230198 MS.gene056842:intron 45.0%
GGGTAAGAAGAAACCAAAGC+AGG + chr1.1:46228777-46228796 MS.gene056842:CDS 45.0%
GTCCTAGATTCTTACCACCT+GGG + chr1.1:46231063-46231082 MS.gene056842:CDS 45.0%
GTGGGATAGCACAACGTATT+AGG - chr1.1:46231502-46231521 None:intergenic 45.0%
GTTCTACGTCAGAAACAGCT+TGG + chr1.1:46229483-46229502 MS.gene056842:CDS 45.0%
GTTCTTCGAGGGGCTTAATT+GGG + chr1.1:46231475-46231494 MS.gene056842:CDS 45.0%
TAACGTCACACCTGAGTGAA+AGG - chr1.1:46230923-46230942 None:intergenic 45.0%
TAAGTGTATGTCACCCGTAC+AGG - chr1.1:46229963-46229982 None:intergenic 45.0%
TACAACAACAGGTGGACAAG+TGG + chr1.1:46231610-46231629 MS.gene056842:CDS 45.0%
TACTACTGCTGTAGTCACCT+TGG - chr1.1:46229074-46229093 None:intergenic 45.0%
TCACAAAGGTCTGGAAGTTC+TGG - chr1.1:46231524-46231543 None:intergenic 45.0%
TCACTGATGCTAGGAGATCA+GGG + chr1.1:46228272-46228291 MS.gene056842:CDS 45.0%
TCCTAGATTCTTACCACCTG+GGG + chr1.1:46231064-46231083 MS.gene056842:CDS 45.0%
TCCTTGTATCCCAGTTTCAG+CGG - chr1.1:46227944-46227963 None:intergenic 45.0%
TCTCCAAGAATATCAGAGGC+CGG + chr1.1:46228220-46228239 MS.gene056842:CDS 45.0%
TGCAATGAAGACAGGCATAG+TGG + chr1.1:46230244-46230263 MS.gene056842:intron 45.0%
TGCACATGTACCAGAAACCT+TGG - chr1.1:46230985-46231004 None:intergenic 45.0%
! AAAGGTCTGGAAGTTCTGGT+GGG - chr1.1:46231520-46231539 None:intergenic 45.0%
! CAATCCTCGCTTTAAGTGTG+CGG - chr1.1:46230180-46230199 None:intergenic 45.0%
! CCACCTTGTTGTAACACCAA+TGG + chr1.1:46228571-46228590 MS.gene056842:CDS 45.0%
! TCCCTCTCCTTTGATGATCT+CGG - chr1.1:46231210-46231229 None:intergenic 45.0%
! TTCAAGTGTGCTGAGTTGAG+GGG - chr1.1:46229860-46229879 None:intergenic 45.0%
! TTGGAGTACTTGCACATGCT+CGG + chr1.1:46230822-46230841 MS.gene056842:CDS 45.0%
! TTGTTACAACCAGTTGGTGC+TGG - chr1.1:46228973-46228992 None:intergenic 45.0%
!! CCATTGGTGTTACAACAAGG+TGG - chr1.1:46228574-46228593 None:intergenic 45.0%
!! CTTGTCATGGAGTATTGTCC+TGG + chr1.1:46229447-46229466 MS.gene056842:CDS 45.0%
!! CTTTAAGTGTGCGGACTAGA+GGG - chr1.1:46230171-46230190 None:intergenic 45.0%
!! GTTTTTCAGAACCAGCAGCA+AGG + chr1.1:46229511-46229530 MS.gene056842:CDS 45.0%
!! TTTAAGTGTGCGGACTAGAG+GGG - chr1.1:46230170-46230189 None:intergenic 45.0%
!!! GCAGTTGATTGGTGGACTTT+TGG + chr1.1:46231239-46231258 MS.gene056842:CDS 45.0%
AAAGAGCCTGAGAACCGACT+GGG + chr1.1:46231416-46231435 MS.gene056842:CDS 50.0%
AACCGACTGGGTACAGAGAA+AGG + chr1.1:46231428-46231447 MS.gene056842:CDS 50.0%
AACTGAAATACCTCCGGTGC+TGG + chr1.1:46228327-46228346 MS.gene056842:CDS 50.0%
AAGCTTCCTCCGCTGAAACT+GGG + chr1.1:46227932-46227951 MS.gene056842:CDS 50.0%
ACCGACTGGGTACAGAGAAA+GGG + chr1.1:46231429-46231448 MS.gene056842:CDS 50.0%
ACTGACATTACTCTCGTCGC+TGG - chr1.1:46229103-46229122 None:intergenic 50.0%
AGCGACGAGAGTAATGTCAG+TGG + chr1.1:46229102-46229121 MS.gene056842:CDS 50.0%
ATGGAGCTGCAGTTGATTGG+TGG + chr1.1:46231231-46231250 MS.gene056842:CDS 50.0%
ATTGCACACCAAATGCGTGG+TGG - chr1.1:46230079-46230098 None:intergenic 50.0%
CACGAAGGAAGAAGATGCCT+AGG + chr1.1:46229334-46229353 MS.gene056842:CDS 50.0%
CATGTACCAGAAACCTTGGC+AGG - chr1.1:46230981-46231000 None:intergenic 50.0%
CCAGAATCAGAACCCTGCTT+TGG - chr1.1:46228793-46228812 None:intergenic 50.0%
CCCGAGATCATCAAAGGAGA+GGG + chr1.1:46231206-46231225 MS.gene056842:CDS 50.0%
CGAGATGCTCAAATGCAGCA+TGG + chr1.1:46229180-46229199 MS.gene056842:CDS 50.0%
CGAGGTACACCCATTGTCAT+TGG - chr1.1:46228085-46228104 None:intergenic 50.0%
CGCACACTTAAAGCGAGGAT+TGG + chr1.1:46230178-46230197 MS.gene056842:intron 50.0%
CGTTCTTCGAGGGGCTTAAT+TGG + chr1.1:46231474-46231493 MS.gene056842:CDS 50.0%
CTCAGAAATCCCAACTCGTG+GGG - chr1.1:46228110-46228129 None:intergenic 50.0%
CTCCAAGAATATCAGAGGCC+GGG + chr1.1:46228221-46228240 MS.gene056842:CDS 50.0%
CTGCGGCTGCACTATGTTAT+TGG - chr1.1:46230271-46230290 None:intergenic 50.0%
CTGGAAGAAAGCAAGTCGCT+TGG + chr1.1:46228346-46228365 MS.gene056842:CDS 50.0%
GACATGGAGCTGCAGTTGAT+TGG + chr1.1:46231228-46231247 MS.gene056842:CDS 50.0%
GATCGCACAGTCACAAAGCA+AGG + chr1.1:46231568-46231587 MS.gene056842:CDS 50.0%
GCAAGTACTCCAACGCAAGA+AGG - chr1.1:46230815-46230834 None:intergenic 50.0%
GCCTAGGGCACAAACTGAAA+GGG + chr1.1:46229350-46229369 MS.gene056842:CDS 50.0%
GCTCAGAAATCCCAACTCGT+GGG - chr1.1:46228111-46228130 None:intergenic 50.0%
GTCACTGATGCTAGGAGATC+AGG + chr1.1:46228271-46228290 MS.gene056842:CDS 50.0%
TAAAGAGCCTGAGAACCGAC+TGG + chr1.1:46231415-46231434 MS.gene056842:CDS 50.0%
TAGTCCGCACACTTAAAGCG+AGG + chr1.1:46230173-46230192 MS.gene056842:intron 50.0%
TCCCTTTCAGTTTGTGCCCT+AGG - chr1.1:46229354-46229373 None:intergenic 50.0%
TCCGCTGAAACTGGGATACA+AGG + chr1.1:46227940-46227959 MS.gene056842:CDS 50.0%
TGCCTAGGGCACAAACTGAA+AGG + chr1.1:46229349-46229368 MS.gene056842:CDS 50.0%
TGCTGAAGTCCTTCTTGCGT+TGG + chr1.1:46230803-46230822 MS.gene056842:CDS 50.0%
TTCCCGGCCTCTGATATTCT+TGG - chr1.1:46228226-46228245 None:intergenic 50.0%
TTGCACACCAAATGCGTGGT+GGG - chr1.1:46230078-46230097 None:intergenic 50.0%
TTGTATCCCAGTTTCAGCGG+AGG - chr1.1:46227941-46227960 None:intergenic 50.0%
TTTATTCCATCTGCAGGGCC+CGG - chr1.1:46228928-46228947 None:intergenic 50.0%
! AACTTGAAGAGCGTGCTCTC+TGG + chr1.1:46228946-46228965 MS.gene056842:CDS 50.0%
! ACGAGTTGGGATTTCTGAGC+CGG + chr1.1:46228111-46228130 MS.gene056842:CDS 50.0%
! ACTTGAAGAGCGTGCTCTCT+GGG + chr1.1:46228947-46228966 MS.gene056842:CDS 50.0%
! ATTTTACTGCTCGGGGACTG+TGG - chr1.1:46228735-46228754 None:intergenic 50.0%
! CAAAGGTCTGGAAGTTCTGG+TGG - chr1.1:46231521-46231540 None:intergenic 50.0%
! CCAAAGCAGGGTTCTGATTC+TGG + chr1.1:46228790-46228809 MS.gene056842:CDS 50.0%
! CCCTCTCCTTTGATGATCTC+GGG - chr1.1:46231209-46231228 None:intergenic 50.0%
! GACTTGCTTTCTTCCAGCAC+CGG - chr1.1:46228343-46228362 None:intergenic 50.0%
! TCAAGTGTGCTGAGTTGAGG+GGG - chr1.1:46229859-46229878 None:intergenic 50.0%
!! AGTTTCCTTGCTTTTGCCCC+AGG - chr1.1:46231083-46231102 None:intergenic 50.0%
!! GCTTTAAGTGTGCGGACTAG+AGG - chr1.1:46230172-46230191 None:intergenic 50.0%
!! GTCATGGAGTATTGTCCTGG+AGG + chr1.1:46229450-46229469 MS.gene056842:CDS 50.0%
CCCCTTTCTCTGTACCCAGT+CGG - chr1.1:46231433-46231452 None:intergenic 55.0%
CCGACTGGGTACAGAGAAAG+GGG + chr1.1:46231430-46231449 MS.gene056842:CDS 55.0%
CTAGCGCCCGAGATCATCAA+AGG + chr1.1:46231200-46231219 MS.gene056842:CDS 55.0%
GAAGCTTCCTCCGCTGAAAC+TGG + chr1.1:46227931-46227950 MS.gene056842:CDS 55.0%
GCACAGTCACAAAGCAAGGG+TGG + chr1.1:46231572-46231591 MS.gene056842:CDS 55.0%
GCCCCAGGTGGTAAGAATCT+AGG - chr1.1:46231068-46231087 None:intergenic 55.0%
GCCCGAGATCATCAAAGGAG+AGG + chr1.1:46231205-46231224 MS.gene056842:CDS 55.0%
GGCTCAGAAATCCCAACTCG+TGG - chr1.1:46228112-46228131 None:intergenic 55.0%
TACCACCTGGGGCAAAAGCA+AGG + chr1.1:46231075-46231094 MS.gene056842:CDS 55.0%
TACCTCGATCCCCACGAGTT+GGG + chr1.1:46228098-46228117 MS.gene056842:CDS 55.0%
TTATGGGCCCACCACGCATT+TGG + chr1.1:46230068-46230087 MS.gene056842:intron 55.0%
! CTTTGATGATCTCGGGCGCT+AGG - chr1.1:46231202-46231221 None:intergenic 55.0%
! TCTGTACCCAGTCGGTTCTC+AGG - chr1.1:46231425-46231444 None:intergenic 55.0%
! TTGCTTTCTTCCAGCACCGG+AGG - chr1.1:46228340-46228359 None:intergenic 55.0%
!! TGAGCCGGTGACTTTGAAGC+AGG + chr1.1:46228126-46228145 MS.gene056842:CDS 55.0%
!! TTCCTTGCTTTTGCCCCAGG+TGG - chr1.1:46231080-46231099 None:intergenic 55.0%
ATAACACCGGGCCCTGCAGA+TGG + chr1.1:46228919-46228938 MS.gene056842:CDS 60.0%
ATCCCAACTCGTGGGGATCG+AGG - chr1.1:46228103-46228122 None:intergenic 60.0%
GTACCTCGATCCCCACGAGT+TGG + chr1.1:46228097-46228116 MS.gene056842:CDS 60.0%
GTGGGCTCTGCCACAAGTTG+TGG - chr1.1:46231140-46231159 None:intergenic 60.0%
! CGGACTAGAGGGGATGGGTT+TGG - chr1.1:46230160-46230179 None:intergenic 60.0%
!! AGTGTGCGGACTAGAGGGGA+TGG - chr1.1:46230166-46230185 None:intergenic 60.0%
!! GTGTGCGGACTAGAGGGGAT+GGG - chr1.1:46230165-46230184 None:intergenic 60.0%
CTCTCTGGGCCAGCACCAAC+TGG + chr1.1:46228961-46228980 MS.gene056842:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 46227815 46231649 46227815 ID=MS.gene056842
chr1.1 mRNA 46227815 46231649 46227815 ID=MS.gene056842.t1;Parent=MS.gene056842
chr1.1 exon 46227815 46229532 46227815 ID=MS.gene056842.t1.exon1;Parent=MS.gene056842.t1
chr1.1 CDS 46227815 46229532 46227815 ID=cds.MS.gene056842.t1;Parent=MS.gene056842.t1
chr1.1 exon 46230794 46231649 46230794 ID=MS.gene056842.t1.exon2;Parent=MS.gene056842.t1
chr1.1 CDS 46230794 46231649 46230794 ID=cds.MS.gene056842.t1;Parent=MS.gene056842.t1
Gene Sequence

>MS.gene056842

ATGGGCTCGTACTCGGGAACTTGTGAAATTGTTGAAGTGAGGGATGACATTAGTACAGTGAAAGATGCAAGGATATATCTGTCCAGTTCAGGATATAGTGTAGCTGAGAAAAATCAGAAGCTTCCTCCGCTGAAACTGGGATACAAGGATAATCTAGATGATGATATTAATAAGCTGTTTGAAACAATTTCTCTGAGATCTTCGTCAAGGGATTTGAGCTATCTACCAGATGGAACAAGTCCAAAGTTGAAAAGCGCGTTAAAAAAGCCAATGACAATGGGTGTACCTCGATCCCCACGAGTTGGGATTTCTGAGCCGGTGACTTTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCGGAAATGGCTGCTATGAAAAGGTTATCAAAGTCAGGAGCTTCTCCAAGAATATCAGAGGCCGGGAAGATACAGACATTGTACAATTCGGTTGTCACTGATGCTAGGAGATCAGGGCCTTCTAACGTTGACAGCAGTAAAAGGAGTTCAACTGAAATACCTCCGGTGCTGGAAGAAAGCAAGTCGCTTGGCTTGAATAAAGAATCACAGTCTCTTCAAACTTCCAAAAGTGTATTGAGCCAAAATGTTCAGTCTTCCGAAATTGCAGTTGCAGAAAATGAAACAGGGGCTTCATTGATGCGAAGTGATTTGGAATGTTCATCAAGTAAATTTGGGGTTTCATCCCAATCATTAGAACCCATTCAAATGGAAAAACAAATGTCTGCTTCTTCTCCACCTTGTTGTAACACCAATGGAAGTAAAGTAGAGTTGCCTGAAAAAGATTCTTCCCCTAAAAAATTAGGAAATAAAGCATCTACACGGAAAGGTATGTTGCAAACAACATCTTCCTCATCTACATCAATAAATGGCAATAGAGTGTGTAAACTTTCGCGCCACAGTCCCCGAGCAGTAAAATCGATCATAAAAAACAAGAGTTTGGGTAAGAAGAAACCAAAGCAGGGTTCTGATTCTGGTTTACATGTTCCTCAGTCAAATGAAGCAAATAACAAGTCAGTTCCTGCTACAACTCCACTTGTTTGCAAGAGATGTTGGTGTGAAATAGAAAATAGCAAAGGTAATATAACACCGGGCCCTGCAGATGGAATAAACTTGAAGAGCGTGCTCTCTGGGCCAGCACCAACTGGTTGTAACAACAGCAGAGAAGTTGCAAAAGTGAAAAAGAATGGCAGATTGAAAGAGCAGCTTGAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGCAGTAGTACAAGTACCAGCGACGAGAGTAATGTCAGTGGTTCTAGTTTTGGCAATAGGCCTCACATGTCAAAGGATTTTAGATGGCAAGCCATACGAGATGCTCAAATGCAGCATGGAGTATTAGGCTTGAGAAACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGTACCGTATATCTTTCTGAACTAATTGGCCAAAATTGTTTGTTTGCTATTAAAGTAATGGACAATGAATTTTTGGCACGAAGGAAGAAGATGCCTAGGGCACAAACTGAAAGGGAAATATTACGAATGCTGGATCATCCTTTTCTTCCAACACTCTATGCACAGTTTACATCAGAAAATCTGTCATGTCTTGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTACGTCAGAAACAGCTTGGTAGATGTTTTTCAGAACCAGCAGCAAGGTACATAACTAAGAACTACTGTTCGGTAATATATTAGGATTTTGTTTTCCATTTGGTCACATTTGTATCATATGTTTAATTTACGTAGTTGCTGATATTATATGCTCGTGCTCATTCTCATCAATCATATTTTGGCATGTGTTTCTGGTTTAGCCAGTGCATTCAATGAGGTTTTGAATTTTGATATGTTTATAGGTGTAACATATTGTTGCATTGCTGCACTGTATAAAATATGATTCTGAGTTATAAAATGTTGCATATATATGTTTGTGCATGCTTGCGCACTGTTGCAGATTGTATAGGTTGAAAATGTGTTTTTTCATCCCCCTCAACTCAGCACACTTGAATTTTGATTCATGATTCCGTTGTTAAGTATCCACTCACTCTTTCTGGATGGATATTTCTTTCCTATAATGATGAAATCTTGCCTGTACGGGTGACATACACTTAGCTAAATTTTTAAGGTCTGAGTTAGGCTTATTTCTCAAACTTAAGGTTAAAGTATGGTTTGTATGTAAACTCATGGAACAATGGGTTATGGGCCCACCACGCATTTGGTGTGCAATAATGGGTGGCTCAATAAAGGATCTATAATAAAAGGTTATATGTCTAGGCGATGTGAGACCAAACCCATCCCCTCTAGTCCGCACACTTAAAGCGAGGATTGGGCGCTGTGTGCTGCTATCTGAAATTGACAATAACAAGTACCATTGCAATGAAGACAGGCATAGTGGTCCAATAACATAGTGCAGCCGCAGAGTTAGTCGCAATTAAGGCAGATTTTTGGATTTTCCAACAAATAATTCTGAAAGTTCCCTAGGAGAAGCAATTGTTTGTTGATCTTCTTACTGTTATGTCTGATTCGATGTCTACTTATTTGTCTGTATAAATAAAACAATTGCTCACTGGTTTTTATGTTCAAGATTAAGCAAGTTAAAAAATTTAAAATAGTTTTTTAAGTAAAATCCATCACTACAATTTTATTGACTTTATGTAGATTGCACTGGTGTGACATTAGTCTTGATTAATAATAGTTTCCCCTATGTGCATGCAATTTTTTGACAAATACATTACGCCAGTTCCACACTGTTTAGTAGACAGTAGTTATCAAGTTGCAAATTGTTTCGATGGTAAACATAATTGAATAACCCTTTTGATCTGCAATTTTGTCAATAGTGCAAGCCAAACCTTCTACTTTACATGAAAACACATATAGATTGGAATGTGATTTTGTATTCACCAGAGAACCTTGTATATGCAGGTTTTACGTTGCTGAAGTCCTTCTTGCGTTGGAGTACTTGCACATGCTCGGAGTTGTTTACCGTGATTTGAAACCAGAGAACATTCTTGTTCGAGAAGACGGTCACATTATGCTCACTGATTTTGACCTTTCACTCAGGTGTGACGTTAGCCCGACACTTCTGAAATCATCTTCTGATATAGATCCTGCCAAGGTTTCTGGTACATGTGCAAAGTCAAGCTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTGCATGCTTCAGTCCTAGATTCTTACCACCTGGGGCAAAAGCAAGGAAACTCAAAGCTGATCTTGCTGCTCATATCAGATCATTGCCACAACTTGTGGCAGAGCCCACAGATGCAAGATCAAACTCATTTGTTGGTACTCATGAATACCTAGCGCCCGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACTTTTGGTGTTTTTCTGTACGAGCTTTTATATGGTAGAACACCCTTCAAAGGTTCTAATAATGAAGAAACATTAGCCAATGTCGTGTTGCAAAATCTCAGATTCCCCGATAGCCCATTTGTTAGTTTCCAAGCAAGGGATCTTATCAAAGGGTTGTTAGTTAAAGAGCCTGAGAACCGACTGGGTACAGAGAAAGGGGCTGCAGAAATTAAACAACATCCGTTCTTCGAGGGGCTTAATTGGGCCCTAATACGTTGTGCTATCCCACCAGAACTTCCAGACCTTTGTGAATTCGAGTTGGGAGTTTCAGACATGATCGCACAGTCACAAAGCAAGGGTGGTAAATATTTAGAGTGTACAACAACAGGTGGACAAGTGGAATTTGAGTTGTTTTAG
Protein sequence

>MS.gene056842.t1

MGSYSGTCEIVEVRDDISTVKDARIYLSSSGYSVAEKNQKLPPLKLGYKDNLDDDINKLFETISLRSSSRDLSYLPDGTSPKLKSALKKPMTMGVPRSPRVGISEPVTLKQALRDLCISKASEMAAMKRLSKSGASPRISEAGKIQTLYNSVVTDARRSGPSNVDSSKRSSTEIPPVLEESKSLGLNKESQSLQTSKSVLSQNVQSSEIAVAENETGASLMRSDLECSSSKFGVSSQSLEPIQMEKQMSASSPPCCNTNGSKVELPEKDSSPKKLGNKASTRKGMLQTTSSSSTSINGNRVCKLSRHSPRAVKSIIKNKSLGKKKPKQGSDSGLHVPQSNEANNKSVPATTPLVCKRCWCEIENSKGNITPGPADGINLKSVLSGPAPTGCNNSREVAKVKKNGRLKEQLEFSQSSKSSQGDYSSSTSTSDESNVSGSSFGNRPHMSKDFRWQAIRDAQMQHGVLGLRNFNLLKKLGCGDIGTVYLSELIGQNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSENLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDIDPAKVSGTCAKSSCIEPFCIEPSCQVACFSPRFLPPGAKARKLKADLAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQNLRFPDSPFVSFQARDLIKGLLVKEPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFELGVSDMIAQSQSKGGKYLECTTTGGQVEFELF