Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056976.t1 | XP_003597541.1 | 98.8 | 332 | 4 | 0 | 1 | 332 | 117 | 448 | 1.20E-192 | 682.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056976.t1 | Q9NU19 | 51.9 | 324 | 152 | 2 | 7 | 329 | 182 | 502 | 5.9e-95 | 349.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056976.t1 | G7IS12 | 98.8 | 332 | 4 | 0 | 1 | 332 | 117 | 448 | 8.8e-193 | 682.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056050 | MS.gene056976 | 0.833972 | 3.92E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056976.t1 | MTR_2g099380 | 98.795 | 332 | 4 | 0 | 1 | 332 | 117 | 448 | 0.0 | 692 |
| MS.gene056976.t1 | MTR_4g068180 | 87.651 | 332 | 41 | 0 | 1 | 332 | 124 | 455 | 0.0 | 616 |
| MS.gene056976.t1 | MTR_2g099380 | 98.611 | 216 | 3 | 0 | 1 | 216 | 117 | 332 | 9.14e-160 | 450 |
| MS.gene056976.t1 | MTR_4g114580 | 27.887 | 355 | 183 | 9 | 18 | 316 | 116 | 453 | 1.24e-28 | 115 |
| MS.gene056976.t1 | MTR_3g083840 | 26.608 | 342 | 182 | 9 | 18 | 303 | 88 | 416 | 2.99e-24 | 102 |
| MS.gene056976.t1 | MTR_8g085300 | 26.608 | 342 | 182 | 8 | 18 | 303 | 99 | 427 | 2.66e-21 | 94.4 |
| MS.gene056976.t1 | MTR_6g016590 | 26.182 | 275 | 148 | 8 | 34 | 300 | 86 | 313 | 7.35e-17 | 80.9 |
| MS.gene056976.t1 | MTR_5g098140 | 25.105 | 239 | 135 | 5 | 28 | 262 | 106 | 304 | 1.97e-15 | 77.0 |
| MS.gene056976.t1 | MTR_1g069705 | 25.735 | 272 | 143 | 11 | 20 | 256 | 60 | 307 | 3.23e-15 | 76.3 |
| MS.gene056976.t1 | MTR_4g115090 | 24.324 | 296 | 177 | 11 | 20 | 299 | 350 | 614 | 3.33e-14 | 73.9 |
| MS.gene056976.t1 | MTR_2g099185 | 28.333 | 180 | 101 | 4 | 86 | 260 | 356 | 512 | 1.09e-13 | 72.0 |
| MS.gene056976.t1 | MTR_2g099185 | 28.333 | 180 | 101 | 4 | 86 | 260 | 361 | 517 | 1.48e-13 | 71.6 |
| MS.gene056976.t1 | MTR_2g099185 | 26.818 | 220 | 117 | 6 | 86 | 300 | 356 | 536 | 1.68e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056976.t1 | AT2G30710 | 83.735 | 332 | 54 | 0 | 1 | 332 | 109 | 440 | 0.0 | 605 |
| MS.gene056976.t1 | AT1G04830 | 27.577 | 359 | 191 | 9 | 1 | 303 | 86 | 431 | 1.42e-27 | 112 |
| MS.gene056976.t1 | AT1G04830 | 27.577 | 359 | 191 | 9 | 1 | 303 | 86 | 431 | 2.06e-27 | 112 |
| MS.gene056976.t1 | AT4G13730 | 24.854 | 342 | 199 | 6 | 7 | 303 | 96 | 424 | 2.96e-22 | 97.1 |
| MS.gene056976.t1 | AT4G13730 | 24.363 | 353 | 198 | 7 | 7 | 303 | 96 | 435 | 5.27e-20 | 90.9 |
| MS.gene056976.t1 | AT3G02460 | 25.623 | 281 | 154 | 8 | 28 | 300 | 81 | 314 | 2.19e-17 | 82.4 |
| MS.gene056976.t1 | AT3G02460 | 25.623 | 281 | 154 | 8 | 28 | 300 | 81 | 314 | 2.69e-17 | 82.0 |
| MS.gene056976.t1 | AT4G13730 | 24.522 | 314 | 168 | 7 | 7 | 264 | 96 | 396 | 4.95e-17 | 81.6 |
| MS.gene056976.t1 | AT5G15930 | 24.818 | 274 | 153 | 7 | 34 | 300 | 84 | 311 | 5.28e-17 | 81.3 |
| MS.gene056976.t1 | AT3G07890 | 26.250 | 240 | 131 | 7 | 28 | 262 | 109 | 307 | 2.16e-16 | 79.7 |
| MS.gene056976.t1 | AT3G07890 | 26.250 | 240 | 131 | 7 | 28 | 262 | 109 | 307 | 2.16e-16 | 79.7 |
| MS.gene056976.t1 | AT3G07890 | 26.250 | 240 | 131 | 7 | 28 | 262 | 109 | 307 | 2.16e-16 | 79.7 |
| MS.gene056976.t1 | AT3G07890 | 26.250 | 240 | 131 | 7 | 28 | 262 | 109 | 307 | 2.16e-16 | 79.7 |
| MS.gene056976.t1 | AT3G07890 | 26.250 | 240 | 131 | 7 | 28 | 262 | 109 | 307 | 2.16e-16 | 79.7 |
| MS.gene056976.t1 | AT1G04830 | 25.602 | 332 | 189 | 8 | 1 | 303 | 86 | 388 | 2.45e-16 | 79.7 |
| MS.gene056976.t1 | AT2G43490 | 30.303 | 165 | 91 | 3 | 93 | 256 | 359 | 500 | 3.61e-15 | 77.0 |
| MS.gene056976.t1 | AT2G43490 | 30.303 | 165 | 91 | 3 | 93 | 256 | 359 | 500 | 5.48e-15 | 76.3 |
| MS.gene056976.t1 | AT2G43490 | 30.303 | 165 | 91 | 3 | 93 | 256 | 355 | 496 | 5.52e-15 | 76.3 |
| MS.gene056976.t1 | AT2G43490 | 30.303 | 165 | 91 | 3 | 93 | 256 | 355 | 496 | 5.52e-15 | 76.3 |
| MS.gene056976.t1 | AT2G43490 | 30.303 | 165 | 91 | 3 | 93 | 256 | 359 | 500 | 5.63e-15 | 76.3 |
| MS.gene056976.t1 | AT2G43490 | 30.303 | 165 | 91 | 3 | 93 | 256 | 359 | 500 | 5.63e-15 | 76.3 |
| MS.gene056976.t1 | AT2G43490 | 30.303 | 165 | 91 | 3 | 93 | 256 | 359 | 500 | 5.63e-15 | 76.3 |
| MS.gene056976.t1 | AT2G43490 | 30.303 | 165 | 91 | 3 | 93 | 256 | 359 | 500 | 5.63e-15 | 76.3 |
| MS.gene056976.t1 | AT3G02460 | 25.207 | 242 | 131 | 6 | 28 | 262 | 81 | 279 | 1.06e-14 | 73.9 |
| MS.gene056976.t1 | AT3G59570 | 31.515 | 165 | 89 | 4 | 93 | 256 | 363 | 504 | 1.66e-14 | 74.7 |
| MS.gene056976.t1 | AT3G59570 | 31.515 | 165 | 89 | 4 | 93 | 256 | 363 | 504 | 2.76e-14 | 74.3 |
| MS.gene056976.t1 | AT3G59570 | 31.515 | 165 | 89 | 4 | 93 | 256 | 363 | 504 | 3.09e-14 | 73.9 |
| MS.gene056976.t1 | AT3G02460 | 24.896 | 241 | 131 | 6 | 28 | 261 | 81 | 278 | 7.32e-14 | 71.2 |
| MS.gene056976.t1 | AT3G02460 | 24.219 | 256 | 144 | 6 | 28 | 276 | 81 | 293 | 7.57e-14 | 71.6 |
| MS.gene056976.t1 | AT5G52580 | 25.083 | 303 | 182 | 12 | 13 | 299 | 349 | 622 | 2.40e-13 | 71.2 |
| MS.gene056976.t1 | AT5G52580 | 25.083 | 303 | 182 | 12 | 13 | 299 | 355 | 628 | 2.91e-13 | 70.9 |
| MS.gene056976.t1 | AT5G52580 | 25.166 | 302 | 181 | 12 | 14 | 299 | 367 | 639 | 3.46e-13 | 70.9 |
| MS.gene056976.t1 | AT2G37290 | 26.293 | 232 | 130 | 7 | 35 | 263 | 317 | 510 | 2.92e-11 | 65.1 |
| MS.gene056976.t1 | AT2G37290 | 26.293 | 232 | 130 | 7 | 35 | 263 | 317 | 510 | 3.11e-11 | 65.1 |
| MS.gene056976.t1 | AT4G28550 | 25.581 | 172 | 101 | 4 | 92 | 260 | 166 | 313 | 3.19e-11 | 63.9 |
Find 80 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTCTGAGCGTTCCGTATC+AGG | 0.228799 | 2.1:+5175092 | None:intergenic |
| CCATCTTGTCACACGCCTTT+GGG | 0.282740 | 2.1:-5173068 | MS.gene056976:CDS |
| TCCATCTTGTCACACGCCTT+TGG | 0.286854 | 2.1:-5173069 | MS.gene056976:CDS |
| AAGACAAGCCTTTGAATTCC+TGG | 0.289816 | 2.1:+5174007 | None:intergenic |
| TCTGGAACCATGGTTATATT+AGG | 0.309896 | 2.1:-5176149 | MS.gene056976:intron |
| TTCCTATCAGAATACTTAGA+AGG | 0.315927 | 2.1:-5174154 | MS.gene056976:CDS |
| CACCAACTAATTCAGATAGA+AGG | 0.337858 | 2.1:-5175178 | MS.gene056976:CDS |
| TTCAAGCCATATGGAGAATC+AGG | 0.344007 | 2.1:-5173319 | MS.gene056976:CDS |
| CCCTGAACATATCCACTTGC+TGG | 0.349458 | 2.1:+5174211 | None:intergenic |
| TGTCTTTAAGTTGAAGGAAT+TGG | 0.360423 | 2.1:-5173990 | MS.gene056976:CDS |
| CCAGTCCCTGATTCTCCATA+TGG | 0.362525 | 2.1:+5173313 | None:intergenic |
| ATTTCTGAACTTGTGGTTGC+TGG | 0.363338 | 2.1:+5174925 | None:intergenic |
| GCAACATCAGGTACAGTTCT+TGG | 0.375969 | 2.1:+5174954 | None:intergenic |
| TCCAGCAAGTGGATATGTTC+AGG | 0.385704 | 2.1:-5174212 | MS.gene056976:CDS |
| GAGGCATTTAGGCAGCTAAA+TGG | 0.395459 | 2.1:+5172283 | None:intergenic |
| AAGGCTTGTCTTTAAGTTGA+AGG | 0.402702 | 2.1:-5173996 | MS.gene056976:CDS |
| GAATTGGTCAGGAGGATTGA+TGG | 0.404086 | 2.1:-5173974 | MS.gene056976:intron |
| AACACCTTCCAACTCAGAAC+TGG | 0.415204 | 2.1:-5172377 | MS.gene056976:CDS |
| TCCCTTCTATCTGAATTAGT+TGG | 0.425652 | 2.1:+5175176 | None:intergenic |
| TTCTTCAATTTGCTTTCCGC+TGG | 0.426482 | 2.1:-5173287 | MS.gene056976:CDS |
| TAGAAGGGAGCATAGATAAC+TGG | 0.429552 | 2.1:-5174138 | MS.gene056976:CDS |
| TGCTTGTCAAAATTGCTTGA+TGG | 0.434811 | 2.1:-5174058 | MS.gene056976:CDS |
| ACTCACTGTAAGAAGAAAAC+TGG | 0.438760 | 2.1:+5172991 | None:intergenic |
| AATATATACACAAGGAAGTC+AGG | 0.439682 | 2.1:+5173016 | None:intergenic |
| TTCTCCATATGGCTTGAAAC+AGG | 0.439984 | 2.1:+5173324 | None:intergenic |
| TTAAGTTGAAGGAATTGGTC+AGG | 0.452027 | 2.1:-5173985 | MS.gene056976:CDS |
| AGATCCTGTTTCAAGCCATA+TGG | 0.461315 | 2.1:-5173328 | MS.gene056976:CDS |
| GCTGTAGGACGCATATAATC+TGG | 0.462195 | 2.1:+5175516 | None:intergenic |
| TCTGAGTTGGAAGGTGTTGA+AGG | 0.469826 | 2.1:+5172382 | None:intergenic |
| AACTCAGAACTGGACTGATC+AGG | 0.476523 | 2.1:-5172367 | MS.gene056976:CDS |
| ATAAATTGCGTGAATTAGCT+TGG | 0.481343 | 2.1:-5175548 | MS.gene056976:CDS |
| CATCTTCTTCCAGGGCCATT+CGG | 0.484264 | 2.1:-5174237 | MS.gene056976:intron |
| AAGTTCACAAAGGTTCTCTC+TGG | 0.491096 | 2.1:-5176167 | MS.gene056976:CDS |
| CCCAAAGGCGTGTGACAAGA+TGG | 0.496262 | 2.1:+5173068 | None:intergenic |
| TCCTATCAGAATACTTAGAA+GGG | 0.501199 | 2.1:-5174153 | MS.gene056976:CDS |
| TCCAGTGATTTCTGAACTTG+TGG | 0.509701 | 2.1:+5174918 | None:intergenic |
| TGATCAGTCCAGTTCTGAGT+TGG | 0.511650 | 2.1:+5172369 | None:intergenic |
| TGAGATCAGCATGCTTCGCC+AGG | 0.514763 | 2.1:-5175069 | MS.gene056976:intron |
| ATGTAGAGGCTGACTGCTAT+TGG | 0.515608 | 2.1:-5174081 | MS.gene056976:CDS |
| GTATTATGATATTCCTGATA+CGG | 0.517822 | 2.1:-5175105 | MS.gene056976:CDS |
| CCAGCAAGTGGATATGTTCA+GGG | 0.518965 | 2.1:-5174211 | MS.gene056976:CDS |
| TGCTGGAAGAATGCAACATC+AGG | 0.522302 | 2.1:+5174942 | None:intergenic |
| TCCCTTCTAAGTATTCTGAT+AGG | 0.522873 | 2.1:+5174152 | None:intergenic |
| TACAGCGTGGAGACTTCTCT+TGG | 0.548017 | 2.1:-5175499 | MS.gene056976:intron |
| ATCAGTAGTCCTACCACCCA+TGG | 0.554168 | 2.1:+5176205 | None:intergenic |
| TTGCTCAACCAGGAATTCAA+AGG | 0.558227 | 2.1:-5174015 | MS.gene056976:CDS |
| TACTCTCTCGTGCATTTATG+TGG | 0.564315 | 2.1:-5172332 | MS.gene056976:CDS |
| CATTACACATTTGCTCAACC+AGG | 0.564692 | 2.1:-5174025 | MS.gene056976:CDS |
| AAAGGTTCTCTCTGGAACCA+TGG | 0.569589 | 2.1:-5176159 | MS.gene056976:CDS |
| ACCAACTAATTCAGATAGAA+GGG | 0.572533 | 2.1:-5175177 | MS.gene056976:CDS |
| GCCATTCGGCATCCAGCAAG+TGG | 0.577019 | 2.1:-5174223 | MS.gene056976:CDS |
| CCATATGGAGAATCAGGGAC+TGG | 0.579566 | 2.1:-5173313 | MS.gene056976:CDS |
| ATACACAAGGAAGTCAGGTA+AGG | 0.582696 | 2.1:+5173021 | None:intergenic |
| TACAGTTCTTGGACAATCAA+CGG | 0.584447 | 2.1:+5174965 | None:intergenic |
| ATTTAGGCAGCTAAATGGCT+AGG | 0.588967 | 2.1:+5172288 | None:intergenic |
| AGTTGAAGGAATTGGTCAGG+AGG | 0.592078 | 2.1:-5173982 | MS.gene056976:CDS |
| AAGGCGTGTGACAAGATGGA+AGG | 0.595513 | 2.1:+5173072 | None:intergenic |
| GGAAATCTTCCATGGGTGGT+AGG | 0.596520 | 2.1:-5176214 | None:intergenic |
| TCCACTTGCTGGATGCCGAA+TGG | 0.597438 | 2.1:+5174222 | None:intergenic |
| ACCACAAGTTCAGAAATCAC+TGG | 0.601882 | 2.1:-5174919 | MS.gene056976:CDS |
| GACTGATCAGGAACTCGAGA+TGG | 0.605616 | 2.1:-5172355 | MS.gene056976:CDS |
| TGGGACACATATCTAGCTGA+AGG | 0.612669 | 2.1:-5173049 | MS.gene056976:CDS |
| ACTAATTCAGATAGAAGGGA+GGG | 0.621364 | 2.1:-5175173 | MS.gene056976:CDS |
| CAGTCCAGTTCTGAGTTGGA+AGG | 0.623870 | 2.1:+5172373 | None:intergenic |
| CAGCTAGATATGTGTCCCAA+AGG | 0.627022 | 2.1:+5173053 | None:intergenic |
| AGATAAAATCTCTAATGTAG+AGG | 0.630211 | 2.1:-5174095 | MS.gene056976:CDS |
| TCAAGCCATATGGAGAATCA+GGG | 0.631147 | 2.1:-5173318 | MS.gene056976:CDS |
| GTCCGGAAATCTTCCATGGG+TGG | 0.634104 | 2.1:-5176218 | None:intergenic |
| AGGCGTGTGACAAGATGGAA+GGG | 0.635093 | 2.1:+5173073 | None:intergenic |
| AAGTATACCTAATATAACCA+TGG | 0.637927 | 2.1:+5176142 | None:intergenic |
| AACTAATTCAGATAGAAGGG+AGG | 0.643726 | 2.1:-5175174 | MS.gene056976:CDS |
| AAGAGAAGTCTCCACGCTGT+AGG | 0.651849 | 2.1:+5175501 | None:intergenic |
| TGGAGCGTATTCTTTACGCA+TGG | 0.656098 | 2.1:-5174899 | MS.gene056976:intron |
| CAGCAAGTGGATATGTTCAG+GGG | 0.660340 | 2.1:-5174210 | MS.gene056976:CDS |
| AAGAGTTATGAAGTTCACAA+AGG | 0.667469 | 2.1:-5176177 | MS.gene056976:CDS |
| AACTGGCAAATATATACACA+AGG | 0.671598 | 2.1:+5173008 | None:intergenic |
| ATTATATGCGTCCTACAGCG+TGG | 0.686436 | 2.1:-5175512 | MS.gene056976:CDS |
| TTGCGTGAATTAGCTTGGAG+TGG | 0.688224 | 2.1:-5175543 | MS.gene056976:CDS |
| TTAGAAGACAGTTGAACCAG+CGG | 0.695324 | 2.1:+5173271 | None:intergenic |
| CAACTGTCTTCTAATCCGCG+AGG | 0.710013 | 2.1:-5173262 | MS.gene056976:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTAAATAAATATTATTC+AGG | + | chr2.1:5172863-5172882 | None:intergenic | 10.0% |
| !!! | ATTTTGAAAAAGAATAATTA+GGG | - | chr2.1:5173185-5173204 | MS.gene056976:intron | 10.0% |
| !! | AAACAAATTACAATATAAAC+GGG | + | chr2.1:5175541-5175560 | None:intergenic | 15.0% |
| !! | AAATATCAAGTTATTTAGAA+TGG | + | chr2.1:5172511-5172530 | None:intergenic | 15.0% |
| !! | AAATGTATGTTTATATATCA+TGG | - | chr2.1:5174210-5174229 | MS.gene056976:CDS | 15.0% |
| !! | AACAACACTATAATTAATAA+AGG | - | chr2.1:5175301-5175320 | MS.gene056976:intron | 15.0% |
| !! | ACAACACTATAATTAATAAA+GGG | - | chr2.1:5175302-5175321 | MS.gene056976:intron | 15.0% |
| !! | ACTAGAATGAAAATAATATA+AGG | + | chr2.1:5173647-5173666 | None:intergenic | 15.0% |
| !! | CAAACAAATTACAATATAAA+CGG | + | chr2.1:5175542-5175561 | None:intergenic | 15.0% |
| !!! | GATTTTGAAAAAGAATAATT+AGG | - | chr2.1:5173184-5173203 | MS.gene056976:intron | 15.0% |
| !!! | TTTTGAAAAAGAATAATTAG+GGG | - | chr2.1:5173186-5173205 | MS.gene056976:intron | 15.0% |
| !! | AAACAAATATGTTGAAACTT+AGG | - | chr2.1:5175083-5175102 | MS.gene056976:CDS | 20.0% |
| !! | AACAAATATGTTGAAACTTA+GGG | - | chr2.1:5175084-5175103 | MS.gene056976:CDS | 20.0% |
| !! | ACAAACAAAATAAGTTAGTT+TGG | + | chr2.1:5174843-5174862 | None:intergenic | 20.0% |
| !! | ACAAGTTTAACATTGAAAAA+TGG | + | chr2.1:5172887-5172906 | None:intergenic | 20.0% |
| !! | ATAGTTAAGGATGAAAATTA+TGG | + | chr2.1:5172918-5172937 | None:intergenic | 20.0% |
| !! | ATATGTGTAACAAATTATTG+AGG | - | chr2.1:5173083-5173102 | MS.gene056976:intron | 20.0% |
| !! | GACTTAAAATGATTATCAAT+AGG | + | chr2.1:5173219-5173238 | None:intergenic | 20.0% |
| !! | TACATAACACAGTAATAAAT+TGG | - | chr2.1:5174102-5174121 | MS.gene056976:CDS | 20.0% |
| !! | TATGTGTAACAAATTATTGA+GGG | - | chr2.1:5173084-5173103 | MS.gene056976:intron | 20.0% |
| !! | TATTAAATTTCACGAGATAA+TGG | - | chr2.1:5175331-5175350 | MS.gene056976:intron | 20.0% |
| !! | TTATCAATCAGTAAGATAAT+CGG | + | chr2.1:5173848-5173867 | None:intergenic | 20.0% |
| !!! | AGTAGTTAATTTTTTAGTAG+TGG | + | chr2.1:5172747-5172766 | None:intergenic | 20.0% |
| !!! | ATTCTTTATTTTTACTGTCT+AGG | - | chr2.1:5175930-5175949 | MS.gene056976:intron | 20.0% |
| !!! | CGTTTATATTGTAATTTGTT+TGG | - | chr2.1:5175540-5175559 | MS.gene056976:CDS | 20.0% |
| !!! | GATAATCATTTTAAGTCAAT+AGG | - | chr2.1:5173222-5173241 | MS.gene056976:intron | 20.0% |
| !!! | GATTTTATCTGAAGATAAAT+CGG | + | chr2.1:5174388-5174407 | None:intergenic | 20.0% |
| !!! | TAAATTTTTGTATGCATCTT+GGG | - | chr2.1:5174690-5174709 | MS.gene056976:intron | 20.0% |
| !!! | TAACTCTTATATTTTCAGTA+TGG | - | chr2.1:5175961-5175980 | MS.gene056976:intron | 20.0% |
| !!! | TATGTTTTAAGAAAAACAAC+AGG | + | chr2.1:5174561-5174580 | None:intergenic | 20.0% |
| !!! | TTAAATTTTTGTATGCATCT+TGG | - | chr2.1:5174689-5174708 | MS.gene056976:intron | 20.0% |
| !!! | TTACTGATTGATAATATTGA+TGG | - | chr2.1:5173854-5173873 | MS.gene056976:intron | 20.0% |
| !!! | TTTTACTTCTCTAAAATTGA+GGG | + | chr2.1:5174935-5174954 | None:intergenic | 20.0% |
| !!! | TTTTAGTCAATAATTAAGAG+TGG | + | chr2.1:5173464-5173483 | None:intergenic | 20.0% |
| ! | AAACTGATATATTGAAAGAG+AGG | + | chr2.1:5174875-5174894 | None:intergenic | 25.0% |
| ! | AACACAGTAATAAATTGGAT+TGG | - | chr2.1:5174107-5174126 | MS.gene056976:CDS | 25.0% |
| ! | AACATTAGTGAATGCAAAAA+TGG | + | chr2.1:5174612-5174631 | None:intergenic | 25.0% |
| ! | AAGTATACCTAATATAACCA+TGG | + | chr2.1:5172354-5172373 | None:intergenic | 25.0% |
| ! | AAGTATCATATGTAATTCTG+AGG | - | chr2.1:5172457-5172476 | MS.gene056976:intron | 25.0% |
| ! | AATTAAGAGTGGCATAATTA+AGG | + | chr2.1:5173453-5173472 | None:intergenic | 25.0% |
| ! | ACATATGATACTTTCATAAC+TGG | + | chr2.1:5172450-5172469 | None:intergenic | 25.0% |
| ! | ACATTAGTGAATGCAAAAAT+GGG | + | chr2.1:5174611-5174630 | None:intergenic | 25.0% |
| ! | ACTCTTGAGATCTTTAATTA+TGG | - | chr2.1:5174154-5174173 | MS.gene056976:CDS | 25.0% |
| ! | AGATAAAATCTCTAATGTAG+AGG | - | chr2.1:5174398-5174417 | MS.gene056976:intron | 25.0% |
| ! | ATTTATCTACAGGATAGTTA+AGG | + | chr2.1:5172931-5172950 | None:intergenic | 25.0% |
| ! | GATAGGAAAACAACAAAAAA+TGG | + | chr2.1:5174327-5174346 | None:intergenic | 25.0% |
| ! | GATTATGATAAAGCAGTAAA+TGG | + | chr2.1:5172622-5172641 | None:intergenic | 25.0% |
| ! | GTATTATGATATTCCTGATA+CGG | - | chr2.1:5173388-5173407 | MS.gene056976:intron | 25.0% |
| ! | GTTTCAGAATTATTCTTTCA+TGG | - | chr2.1:5173110-5173129 | MS.gene056976:intron | 25.0% |
| ! | TCAAGAAGAAAAATTAACCA+TGG | + | chr2.1:5173264-5173283 | None:intergenic | 25.0% |
| ! | TGCTTATATGAAAAATGCAT+TGG | - | chr2.1:5173144-5173163 | MS.gene056976:intron | 25.0% |
| ! | TTATGTACTTCAAATGCAAA+AGG | + | chr2.1:5174089-5174108 | None:intergenic | 25.0% |
| !! | AATACTAGCATTTTACAGAA+TGG | + | chr2.1:5175684-5175703 | None:intergenic | 25.0% |
| !! | TTGACAATGAACAACATTTT+GGG | + | chr2.1:5172798-5172817 | None:intergenic | 25.0% |
| !! | TTTCAGTAGCAGATTTTATT+TGG | + | chr2.1:5175131-5175150 | None:intergenic | 25.0% |
| !! | TTTTTATTGAGGTCAAAAGA+TGG | - | chr2.1:5173683-5173702 | MS.gene056976:intron | 25.0% |
| !!! | AAAGAATAATTAGGGGTATT+TGG | - | chr2.1:5173193-5173212 | MS.gene056976:intron | 25.0% |
| !!! | AGAAATTTGTTGAACTTGTA+AGG | + | chr2.1:5175274-5175293 | None:intergenic | 25.0% |
| !!! | AGTTCAGATCAGAATTTTTT+AGG | - | chr2.1:5173060-5173079 | MS.gene056976:CDS | 25.0% |
| !!! | CATTTTATTTTATGTCACCA+TGG | + | chr2.1:5175049-5175068 | None:intergenic | 25.0% |
| !!! | GTTTTACTTCTCTAAAATTG+AGG | + | chr2.1:5174936-5174955 | None:intergenic | 25.0% |
| !!! | TTGTTGTGGATTTTTTATTG+AGG | - | chr2.1:5173672-5173691 | MS.gene056976:intron | 25.0% |
| AACTGGCAAATATATACACA+AGG | + | chr2.1:5175488-5175507 | None:intergenic | 30.0% | |
| AAGAGTTATGAAGTTCACAA+AGG | - | chr2.1:5172316-5172335 | MS.gene056976:CDS | 30.0% | |
| AATATATACACAAGGAAGTC+AGG | + | chr2.1:5175480-5175499 | None:intergenic | 30.0% | |
| AATTCACGCAATTTATCTAC+AGG | + | chr2.1:5172941-5172960 | None:intergenic | 30.0% | |
| ACCAACTAATTCAGATAGAA+GGG | - | chr2.1:5173316-5173335 | MS.gene056976:CDS | 30.0% | |
| AGATAATCGGAACAAAATCT+AGG | + | chr2.1:5173835-5173854 | None:intergenic | 30.0% | |
| ATAAATTGCGTGAATTAGCT+TGG | - | chr2.1:5172945-5172964 | MS.gene056976:intron | 30.0% | |
| ATCAGACATCACACTTAAAA+AGG | + | chr2.1:5175385-5175404 | None:intergenic | 30.0% | |
| ATCCTGTCTTAAATAGTTAG+CGG | - | chr2.1:5173780-5173799 | MS.gene056976:intron | 30.0% | |
| ATCTTGTAGTCAAGATGATA+AGG | - | chr2.1:5175573-5175592 | MS.gene056976:intron | 30.0% | |
| CATTAGTGAATGCAAAAATG+GGG | + | chr2.1:5174610-5174629 | None:intergenic | 30.0% | |
| CTATAACCTAACATGCTAAA+CGG | + | chr2.1:5175859-5175878 | None:intergenic | 30.0% | |
| GTATGACACTATGAAATGAT+AGG | - | chr2.1:5174736-5174755 | MS.gene056976:intron | 30.0% | |
| TATAACCTAACATGCTAAAC+GGG | + | chr2.1:5175858-5175877 | None:intergenic | 30.0% | |
| TCCTATCAGAATACTTAGAA+GGG | - | chr2.1:5174340-5174359 | MS.gene056976:intron | 30.0% | |
| TGTAACAAATTATTGAGGGT+GGG | - | chr2.1:5173088-5173107 | MS.gene056976:intron | 30.0% | |
| TTAAAGATGAACTGACAACA+GGG | - | chr2.1:5173287-5173306 | MS.gene056976:CDS | 30.0% | |
| TTCCTATCAGAATACTTAGA+AGG | - | chr2.1:5174339-5174358 | MS.gene056976:intron | 30.0% | |
| TTTAAAGATGAACTGACAAC+AGG | - | chr2.1:5173286-5173305 | MS.gene056976:CDS | 30.0% | |
| ! | AAGCTTAATCCATTTCTAGA+AGG | + | chr2.1:5173897-5173916 | None:intergenic | 30.0% |
| ! | AATATAGCTTCTTGTTGTGA+TGG | + | chr2.1:5172724-5172743 | None:intergenic | 30.0% |
| ! | AGCTTAATCCATTTCTAGAA+GGG | + | chr2.1:5173896-5173915 | None:intergenic | 30.0% |
| ! | ATATAGCTTCTTGTTGTGAT+GGG | + | chr2.1:5172723-5172742 | None:intergenic | 30.0% |
| ! | CTGAATTTTTATGCTGAACT+AGG | - | chr2.1:5175794-5175813 | MS.gene056976:intron | 30.0% |
| ! | CTTGACAATGAACAACATTT+TGG | + | chr2.1:5172799-5172818 | None:intergenic | 30.0% |
| ! | GTTTTATGTGAACTTAGGTT+TGG | - | chr2.1:5172558-5172577 | MS.gene056976:intron | 30.0% |
| !! | TGTCTTTAAGTTGAAGGAAT+TGG | - | chr2.1:5174503-5174522 | MS.gene056976:intron | 30.0% |
| !!! | CAATTGATATCTGCTTTTTC+AGG | - | chr2.1:5172651-5172670 | MS.gene056976:intron | 30.0% |
| !!! | TTATTTTTACTGTCTAGGAG+AGG | - | chr2.1:5175935-5175954 | MS.gene056976:intron | 30.0% |
| AAATGATAGGTTGTCGTACA+AGG | - | chr2.1:5174749-5174768 | MS.gene056976:intron | 35.0% | |
| AACTAATTCAGATAGAAGGG+AGG | - | chr2.1:5173319-5173338 | MS.gene056976:CDS | 35.0% | |
| AATGATAGGTTGTCGTACAA+GGG | - | chr2.1:5174750-5174769 | MS.gene056976:intron | 35.0% | |
| ACCATGAAAGCAGTATCTAA+TGG | + | chr2.1:5175023-5175042 | None:intergenic | 35.0% | |
| ACCATTAGATACTGCTTTCA+TGG | - | chr2.1:5175019-5175038 | MS.gene056976:intron | 35.0% | |
| ACTAATTCAGATAGAAGGGA+GGG | - | chr2.1:5173320-5173339 | MS.gene056976:CDS | 35.0% | |
| ACTCACTGTAAGAAGAAAAC+TGG | + | chr2.1:5175505-5175524 | None:intergenic | 35.0% | |
| AGAATGCCAAAAAACGAACA+AGG | + | chr2.1:5175915-5175934 | None:intergenic | 35.0% | |
| ATGGTTAGACAGGGTTTATA+AGG | - | chr2.1:5173723-5173742 | MS.gene056976:intron | 35.0% | |
| CACCAACTAATTCAGATAGA+AGG | - | chr2.1:5173315-5173334 | MS.gene056976:CDS | 35.0% | |
| CACTAAACCGTATAGACATA+CGG | + | chr2.1:5174663-5174682 | None:intergenic | 35.0% | |
| CATTCTAGTGTTCTTTGTTG+TGG | - | chr2.1:5173658-5173677 | MS.gene056976:intron | 35.0% | |
| CCAAATCCAAATGCAAAAGA+GGG | + | chr2.1:5174804-5174823 | None:intergenic | 35.0% | |
| CTAAACGGGACCAATAAAAA+GGG | + | chr2.1:5175844-5175863 | None:intergenic | 35.0% | |
| GAATGCCAAAAAACGAACAA+GGG | + | chr2.1:5175914-5175933 | None:intergenic | 35.0% | |
| GATACTTTCATAACTGGAAG+AGG | + | chr2.1:5172444-5172463 | None:intergenic | 35.0% | |
| GCAAAAAATAGTCGACAAGA+AGG | + | chr2.1:5174185-5174204 | None:intergenic | 35.0% | |
| GCAACGTGTTAGACTTATTA+TGG | + | chr2.1:5172489-5172508 | None:intergenic | 35.0% | |
| GTAGTCAAGATGATAAGGAA+TGG | - | chr2.1:5175578-5175597 | MS.gene056976:intron | 35.0% | |
| GTATGTCTATACGGTTTAGT+GGG | - | chr2.1:5174662-5174681 | MS.gene056976:intron | 35.0% | |
| GTGTAACAAATTATTGAGGG+TGG | - | chr2.1:5173087-5173106 | MS.gene056976:intron | 35.0% | |
| TAATATAAGGCCTGACAAAC+AGG | + | chr2.1:5173634-5173653 | None:intergenic | 35.0% | |
| TACAGTTCTTGGACAATCAA+CGG | + | chr2.1:5173531-5173550 | None:intergenic | 35.0% | |
| TCCAAATCCAAATGCAAAAG+AGG | + | chr2.1:5174805-5174824 | None:intergenic | 35.0% | |
| TCCCTTCTAAGTATTCTGAT+AGG | + | chr2.1:5174344-5174363 | None:intergenic | 35.0% | |
| TCCCTTCTATCTGAATTAGT+TGG | + | chr2.1:5173320-5173339 | None:intergenic | 35.0% | |
| TGCTTGTCAAAATTGCTTGA+TGG | - | chr2.1:5174435-5174454 | MS.gene056976:intron | 35.0% | |
| TGGACTGAACAAATTTGACA+CGG | - | chr2.1:5175351-5175370 | MS.gene056976:intron | 35.0% | |
| TGGTAGATTTCAGTAAACGA+CGG | - | chr2.1:5175632-5175651 | MS.gene056976:intron | 35.0% | |
| ! | AACATTTTGGGCCAAAATCA+AGG | + | chr2.1:5172786-5172805 | None:intergenic | 35.0% |
| ! | ACATTTTGGGCCAAAATCAA+GGG | + | chr2.1:5172785-5172804 | None:intergenic | 35.0% |
| ! | ATACTTCTGTTTCTTCCTAG+CGG | - | chr2.1:5173990-5174009 | MS.gene056976:CDS | 35.0% |
| ! | ATCAAAGTGTTCAACTCAGA+TGG | - | chr2.1:5175711-5175730 | MS.gene056976:intron | 35.0% |
| ! | ATCCGCTAACTATTTAAGAC+AGG | + | chr2.1:5173785-5173804 | None:intergenic | 35.0% |
| ! | CTAAAATTGAGGGCATGTAA+TGG | + | chr2.1:5174925-5174944 | None:intergenic | 35.0% |
| ! | GTCATACTCACATTTTCTCT+AGG | + | chr2.1:5174723-5174742 | None:intergenic | 35.0% |
| ! | GTCTCTCATACCCTTTTTAT+TGG | - | chr2.1:5175831-5175850 | MS.gene056976:intron | 35.0% |
| ! | GTCTTTCATTCCCTTGATTT+TGG | - | chr2.1:5172772-5172791 | MS.gene056976:intron | 35.0% |
| ! | TAGTTTCTTTTCCTACGTCA+TGG | + | chr2.1:5174026-5174045 | None:intergenic | 35.0% |
| ! | TCAAAGTGTTCAACTCAGAT+GGG | - | chr2.1:5175712-5175731 | MS.gene056976:intron | 35.0% |
| ! | TCTGGAACCATGGTTATATT+AGG | - | chr2.1:5172344-5172363 | MS.gene056976:CDS | 35.0% |
| ! | TGTAGATTCCCTTCTAGAAA+TGG | - | chr2.1:5173885-5173904 | MS.gene056976:intron | 35.0% |
| !! | AAGGCTTGTCTTTAAGTTGA+AGG | - | chr2.1:5174497-5174516 | MS.gene056976:intron | 35.0% |
| !! | GTCGAGTTTTATGTGAACTT+AGG | - | chr2.1:5172553-5172572 | MS.gene056976:intron | 35.0% |
| !! | TTAAGTTGAAGGAATTGGTC+AGG | - | chr2.1:5174508-5174527 | MS.gene056976:intron | 35.0% |
| !! | TTGATGGTAACCTTTTTCTC+TGG | - | chr2.1:5174535-5174554 | MS.gene056976:intron | 35.0% |
| !!! | ATCTATCGTCGTTTTTTCAG+TGG | - | chr2.1:5176044-5176063 | MS.gene056976:intron | 35.0% |
| !!! | GGATTTTAGTTCGAGTAAGA+TGG | - | chr2.1:5173704-5173723 | MS.gene056976:intron | 35.0% |
| AAAAATCAGTGCAAACCTCG+CGG | + | chr2.1:5175249-5175268 | None:intergenic | 40.0% | |
| AAACAACAGGCCAGAGAAAA+AGG | + | chr2.1:5174548-5174567 | None:intergenic | 40.0% | |
| AACCACACCGTATGTCTATA+CGG | - | chr2.1:5174653-5174672 | MS.gene056976:intron | 40.0% | |
| AAGACAAGCCTTTGAATTCC+TGG | + | chr2.1:5174489-5174508 | None:intergenic | 40.0% | |
| AAGTTCACAAAGGTTCTCTC+TGG | - | chr2.1:5172326-5172345 | MS.gene056976:CDS | 40.0% | |
| ACCACAAGTTCAGAAATCAC+TGG | - | chr2.1:5173574-5173593 | MS.gene056976:intron | 40.0% | |
| ACTTCTCTTGGTAAGCTCTA+TGG | - | chr2.1:5173006-5173025 | MS.gene056976:CDS | 40.0% | |
| AGATCCTGTTTCAAGCCATA+TGG | - | chr2.1:5175165-5175184 | MS.gene056976:CDS | 40.0% | |
| ATAACTGGAAGAGGTCACTT+AGG | + | chr2.1:5172435-5172454 | None:intergenic | 40.0% | |
| ATACACAAGGAAGTCAGGTA+AGG | + | chr2.1:5175475-5175494 | None:intergenic | 40.0% | |
| ATACGGTGTGGTTGTTGAAA+TGG | + | chr2.1:5174646-5174665 | None:intergenic | 40.0% | |
| ATATGGCTTGAAACAGGATC+TGG | + | chr2.1:5175166-5175185 | None:intergenic | 40.0% | |
| ATTTCTGAACTTGTGGTTGC+TGG | + | chr2.1:5173571-5173590 | None:intergenic | 40.0% | |
| CATTACACATTTGCTCAACC+AGG | - | chr2.1:5174468-5174487 | MS.gene056976:intron | 40.0% | |
| CCAAAAAACGAACAAGGGTA+AGG | + | chr2.1:5175909-5175928 | None:intergenic | 40.0% | |
| CGTATGTCTATACGGTTTAG+TGG | - | chr2.1:5174661-5174680 | MS.gene056976:intron | 40.0% | |
| GATAACCTCATCTTCTTCCA+GGG | - | chr2.1:5174248-5174267 | MS.gene056976:intron | 40.0% | |
| GCTAAACGGGACCAATAAAA+AGG | + | chr2.1:5175845-5175864 | None:intergenic | 40.0% | |
| GTGGCATAATTAAGGATACC+TGG | + | chr2.1:5173445-5173464 | None:intergenic | 40.0% | |
| GTTAGACAGGGTTTATAAGG+CGG | - | chr2.1:5173726-5173745 | MS.gene056976:intron | 40.0% | |
| GTTGCAATCTATGCTTGAGA+TGG | - | chr2.1:5174129-5174148 | MS.gene056976:CDS | 40.0% | |
| GTTTACTGAAATCTACCAGC+CGG | + | chr2.1:5175630-5175649 | None:intergenic | 40.0% | |
| TACGGTGTGGTTGTTGAAAT+GGG | + | chr2.1:5174645-5174664 | None:intergenic | 40.0% | |
| TACTCTCTCGTGCATTTATG+TGG | - | chr2.1:5176161-5176180 | MS.gene056976:CDS | 40.0% | |
| TCAAGCCATATGGAGAATCA+GGG | - | chr2.1:5175175-5175194 | MS.gene056976:CDS | 40.0% | |
| TCCAGTGATTTCTGAACTTG+TGG | + | chr2.1:5173578-5173597 | None:intergenic | 40.0% | |
| TCGAGTAAGATGGTTAGACA+GGG | - | chr2.1:5173714-5173733 | MS.gene056976:intron | 40.0% | |
| TGATAACCTCATCTTCTTCC+AGG | - | chr2.1:5174247-5174266 | MS.gene056976:intron | 40.0% | |
| TTACAGATGACCTGTTTGTC+AGG | - | chr2.1:5173621-5173640 | MS.gene056976:intron | 40.0% | |
| TTAGAAGACAGTTGAACCAG+CGG | + | chr2.1:5175225-5175244 | None:intergenic | 40.0% | |
| TTAGACAGGGTTTATAAGGC+GGG | - | chr2.1:5173727-5173746 | MS.gene056976:intron | 40.0% | |
| TTCAAGCCATATGGAGAATC+AGG | - | chr2.1:5175174-5175193 | MS.gene056976:CDS | 40.0% | |
| TTCGAGTAAGATGGTTAGAC+AGG | - | chr2.1:5173713-5173732 | MS.gene056976:intron | 40.0% | |
| TTCTCCATATGGCTTGAAAC+AGG | + | chr2.1:5175172-5175191 | None:intergenic | 40.0% | |
| TTGCTCAACCAGGAATTCAA+AGG | - | chr2.1:5174478-5174497 | MS.gene056976:intron | 40.0% | |
| ! | AAAAAGGGTATGAGAGACTG+TGG | + | chr2.1:5175829-5175848 | None:intergenic | 40.0% |
| ! | ACTGCTTTCATGGTTTTCCA+TGG | - | chr2.1:5175029-5175048 | MS.gene056976:intron | 40.0% |
| ! | CCCTCTTTTGCATTTGGATT+TGG | - | chr2.1:5174801-5174820 | MS.gene056976:intron | 40.0% |
| ! | GTCAACGTCATGATTTTCCA+TGG | - | chr2.1:5173244-5173263 | MS.gene056976:intron | 40.0% |
| ! | TAACAGCCCTCTTTTGCATT+TGG | - | chr2.1:5174795-5174814 | MS.gene056976:intron | 40.0% |
| ! | TAGAAGCATGTAAGACAGTG+TGG | - | chr2.1:5173917-5173936 | MS.gene056976:intron | 40.0% |
| ! | TAGAAGGGAGCATAGATAAC+TGG | - | chr2.1:5174355-5174374 | MS.gene056976:intron | 40.0% |
| ! | TTCTTCAATTTGCTTTCCGC+TGG | - | chr2.1:5175206-5175225 | MS.gene056976:intron | 40.0% |
| !!! | CCTTACCCTTGTTCGTTTTT+TGG | - | chr2.1:5175906-5175925 | MS.gene056976:intron | 40.0% |
| !!! | CGTACAAGGGTGTCTATTTT+GGG | - | chr2.1:5174763-5174782 | MS.gene056976:intron | 40.0% |
| !!! | TCGTACAAGGGTGTCTATTT+TGG | - | chr2.1:5174762-5174781 | MS.gene056976:intron | 40.0% |
| AACACCTTCCAACTCAGAAC+TGG | - | chr2.1:5176116-5176135 | MS.gene056976:intron | 45.0% | |
| AACCGTATAGACATACGGTG+TGG | + | chr2.1:5174658-5174677 | None:intergenic | 45.0% | |
| AACTCAGAACTGGACTGATC+AGG | - | chr2.1:5176126-5176145 | MS.gene056976:intron | 45.0% | |
| AGTGTTCAACTCAGATGGGA+TGG | - | chr2.1:5175716-5175735 | MS.gene056976:intron | 45.0% | |
| AGTTGAAGGAATTGGTCAGG+AGG | - | chr2.1:5174511-5174530 | MS.gene056976:intron | 45.0% | |
| ATGTAGAGGCTGACTGCTAT+TGG | - | chr2.1:5174412-5174431 | MS.gene056976:intron | 45.0% | |
| ATTATATGCGTCCTACAGCG+TGG | - | chr2.1:5172981-5173000 | MS.gene056976:intron | 45.0% | |
| CAGCAAGTGGATATGTTCAG+GGG | - | chr2.1:5174283-5174302 | MS.gene056976:intron | 45.0% | |
| CAGCTAGATATGTGTCCCAA+AGG | + | chr2.1:5175443-5175462 | None:intergenic | 45.0% | |
| CCAGCAAGTGGATATGTTCA+GGG | - | chr2.1:5174282-5174301 | MS.gene056976:intron | 45.0% | |
| GAATTGGTCAGGAGGATTGA+TGG | - | chr2.1:5174519-5174538 | MS.gene056976:intron | 45.0% | |
| GCAACATCAGGTACAGTTCT+TGG | + | chr2.1:5173542-5173561 | None:intergenic | 45.0% | |
| GCTGTAGGACGCATATAATC+TGG | + | chr2.1:5172980-5172999 | None:intergenic | 45.0% | |
| TCCAGCAAGTGGATATGTTC+AGG | - | chr2.1:5174281-5174300 | MS.gene056976:intron | 45.0% | |
| TGCTGGAAGAATGCAACATC+AGG | + | chr2.1:5173554-5173573 | None:intergenic | 45.0% | |
| TGGAGCGTATTCTTTACGCA+TGG | - | chr2.1:5173594-5173613 | MS.gene056976:intron | 45.0% | |
| TGGGACACATATCTAGCTGA+AGG | - | chr2.1:5175444-5175463 | MS.gene056976:intron | 45.0% | |
| TTGGTCCCGTTTAGCATGTT+AGG | - | chr2.1:5175850-5175869 | MS.gene056976:intron | 45.0% | |
| ! | TTGCGTGAATTAGCTTGGAG+TGG | - | chr2.1:5172950-5172969 | MS.gene056976:intron | 45.0% |
| !! | AAAGGTTCTCTCTGGAACCA+TGG | - | chr2.1:5172334-5172353 | MS.gene056976:CDS | 45.0% |
| !! | GAGAGCATTGATGAAGACTG+AGG | + | chr2.1:5174979-5174998 | None:intergenic | 45.0% |
| !! | TCTGAGTTGGAAGGTGTTGA+AGG | + | chr2.1:5176114-5176133 | None:intergenic | 45.0% |
| !! | TGATCAGTCCAGTTCTGAGT+TGG | + | chr2.1:5176127-5176146 | None:intergenic | 45.0% |
| !!! | AGGGAGTTTTGAGAAGGAAG+CGG | - | chr2.1:5173339-5173358 | MS.gene056976:intron | 45.0% |
| AAGAGAAGTCTCCACGCTGT+AGG | + | chr2.1:5172995-5173014 | None:intergenic | 50.0% | |
| AAGGCGTGTGACAAGATGGA+AGG | + | chr2.1:5175424-5175443 | None:intergenic | 50.0% | |
| AATGGCCCTGGAAGAAGATG+AGG | + | chr2.1:5174256-5174275 | None:intergenic | 50.0% | |
| ACTGAAATCTACCAGCCGGA+GGG | + | chr2.1:5175626-5175645 | None:intergenic | 50.0% | |
| AGGCGTGTGACAAGATGGAA+GGG | + | chr2.1:5175423-5175442 | None:intergenic | 50.0% | |
| CAACTGTCTTCTAATCCGCG+AGG | - | chr2.1:5175231-5175250 | MS.gene056976:intron | 50.0% | |
| CATCTTCTTCCAGGGCCATT+CGG | - | chr2.1:5174256-5174275 | MS.gene056976:intron | 50.0% | |
| CCAGTCCCTGATTCTCCATA+TGG | + | chr2.1:5175183-5175202 | None:intergenic | 50.0% | |
| CCATATGGAGAATCAGGGAC+TGG | - | chr2.1:5175180-5175199 | MS.gene056976:CDS | 50.0% | |
| CCATCTTGTCACACGCCTTT+GGG | - | chr2.1:5175425-5175444 | MS.gene056976:intron | 50.0% | |
| CCCTGAACATATCCACTTGC+TGG | + | chr2.1:5174285-5174304 | None:intergenic | 50.0% | |
| GACTGATCAGGAACTCGAGA+TGG | - | chr2.1:5176138-5176157 | MS.gene056976:intron | 50.0% | |
| TACAGCGTGGAGACTTCTCT+TGG | - | chr2.1:5172994-5173013 | MS.gene056976:intron | 50.0% | |
| TACTGAAATCTACCAGCCGG+AGG | + | chr2.1:5175627-5175646 | None:intergenic | 50.0% | |
| TCAGATGGGATGGATGCATG+TGG | - | chr2.1:5175726-5175745 | MS.gene056976:intron | 50.0% | |
| TCCATCTTGTCACACGCCTT+TGG | - | chr2.1:5175424-5175443 | MS.gene056976:intron | 50.0% | |
| TTGTCAATATGTGCCCCCTC+CGG | - | chr2.1:5175608-5175627 | MS.gene056976:intron | 50.0% | |
| ! | GCAGTTTAGAGCCATGACGT+AGG | - | chr2.1:5174012-5174031 | MS.gene056976:CDS | 50.0% |
| !! | CAGTCCAGTTCTGAGTTGGA+AGG | + | chr2.1:5176123-5176142 | None:intergenic | 50.0% |
| !!! | GAAGGGAGGGAGTTTTGAGA+AGG | - | chr2.1:5173333-5173352 | MS.gene056976:intron | 50.0% |
| CTGAAATCTACCAGCCGGAG+GGG | + | chr2.1:5175625-5175644 | None:intergenic | 55.0% | |
| TCGTCTGAGCGTTCCGTATC+AGG | + | chr2.1:5173404-5173423 | None:intergenic | 55.0% | |
| TGAAATCTACCAGCCGGAGG+GGG | + | chr2.1:5175624-5175643 | None:intergenic | 55.0% | |
| TGAGATCAGCATGCTTCGCC+AGG | - | chr2.1:5173424-5173443 | MS.gene056976:intron | 55.0% | |
| ! | CCCAAAGGCGTGTGACAAGA+TGG | + | chr2.1:5175428-5175447 | None:intergenic | 55.0% |
| ! | TCCACTTGCTGGATGCCGAA+TGG | + | chr2.1:5174274-5174293 | None:intergenic | 55.0% |
| !! | CATGGCTCTAAACTGCCGCT+AGG | + | chr2.1:5174008-5174027 | None:intergenic | 55.0% |
| GCCATTCGGCATCCAGCAAG+TGG | - | chr2.1:5174270-5174289 | MS.gene056976:intron | 60.0% | |
| CAATATGTGCCCCCTCCGGC+TGG | - | chr2.1:5175612-5175631 | MS.gene056976:intron | 65.0% | |
| TGCTGGATGCCGAATGGCCC+TGG | + | chr2.1:5174268-5174287 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 5172290 | 5176225 | 5172290 | ID=MS.gene056976 |
| chr2.1 | mRNA | 5172290 | 5176225 | 5172290 | ID=MS.gene056976.t1;Parent=MS.gene056976 |
| chr2.1 | exon | 5176150 | 5176225 | 5176150 | ID=MS.gene056976.t1.exon1;Parent=MS.gene056976.t1 |
| chr2.1 | CDS | 5176150 | 5176225 | 5176150 | ID=cds.MS.gene056976.t1;Parent=MS.gene056976.t1 |
| chr2.1 | exon | 5175500 | 5175570 | 5175500 | ID=MS.gene056976.t1.exon2;Parent=MS.gene056976.t1 |
| chr2.1 | CDS | 5175500 | 5175570 | 5175500 | ID=cds.MS.gene056976.t1;Parent=MS.gene056976.t1 |
| chr2.1 | exon | 5175070 | 5175207 | 5175070 | ID=MS.gene056976.t1.exon3;Parent=MS.gene056976.t1 |
| chr2.1 | CDS | 5175070 | 5175207 | 5175070 | ID=cds.MS.gene056976.t1;Parent=MS.gene056976.t1 |
| chr2.1 | exon | 5174900 | 5174991 | 5174900 | ID=MS.gene056976.t1.exon4;Parent=MS.gene056976.t1 |
| chr2.1 | CDS | 5174900 | 5174991 | 5174900 | ID=cds.MS.gene056976.t1;Parent=MS.gene056976.t1 |
| chr2.1 | exon | 5173975 | 5174246 | 5173975 | ID=MS.gene056976.t1.exon5;Parent=MS.gene056976.t1 |
| chr2.1 | CDS | 5173975 | 5174246 | 5173975 | ID=cds.MS.gene056976.t1;Parent=MS.gene056976.t1 |
| chr2.1 | exon | 5173263 | 5173348 | 5173263 | ID=MS.gene056976.t1.exon6;Parent=MS.gene056976.t1 |
| chr2.1 | CDS | 5173263 | 5173348 | 5173263 | ID=cds.MS.gene056976.t1;Parent=MS.gene056976.t1 |
| chr2.1 | exon | 5172997 | 5173098 | 5172997 | ID=MS.gene056976.t1.exon7;Parent=MS.gene056976.t1 |
| chr2.1 | CDS | 5172997 | 5173098 | 5172997 | ID=cds.MS.gene056976.t1;Parent=MS.gene056976.t1 |
| chr2.1 | exon | 5172290 | 5172451 | 5172290 | ID=MS.gene056976.t1.exon8;Parent=MS.gene056976.t1 |
| chr2.1 | CDS | 5172290 | 5172451 | 5172290 | ID=cds.MS.gene056976.t1;Parent=MS.gene056976.t1 |
| Gene Sequence |
| Protein sequence |
