Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057348.t1 | XP_003600904.1 | 96.8 | 568 | 16 | 1 | 1 | 568 | 18 | 583 | 0.00E+00 | 1126.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057348.t1 | Q39033 | 69.4 | 572 | 157 | 7 | 1 | 568 | 14 | 571 | 1.7e-235 | 816.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057348.t1 | Q93YX8 | 96.8 | 568 | 16 | 1 | 1 | 568 | 18 | 583 | 0.0e+00 | 1126.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057347 | MS.gene057348 | 0.925425 | 1.87E-90 | -1.69E-46 |
| MS.gene057348 | MS.gene69222 | 0.924031 | 1.21E-89 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 151 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTATAATCCATTAAT+TGG | 0.072901 | 3.3:-78460979 | MS.gene057348:CDS |
| CAAATGTTTGACGTCTATTA+AGG | 0.230837 | 3.3:-78462154 | MS.gene057348:CDS |
| CCATGCATCCACCCAATTAA+TGG | 0.240859 | 3.3:+78460967 | None:intergenic |
| AGGATCGAAAACCTCATTAA+TGG | 0.247589 | 3.3:+78460529 | None:intergenic |
| AGGATAGTTGGTTGCCTTCT+TGG | 0.250112 | 3.3:-78459764 | MS.gene057348:CDS |
| TGGTTCTTTGGCAGGGTTAT+GGG | 0.259926 | 3.3:-78460640 | MS.gene057348:intron |
| TAATTAGGTGACTGTATATA+TGG | 0.261260 | 3.3:-78460350 | MS.gene057348:intron |
| GGTAGTCATCTGATGTATTT+TGG | 0.264168 | 3.3:+78461527 | None:intergenic |
| GTGGTTCTTTGGCAGGGTTA+TGG | 0.264327 | 3.3:-78460641 | MS.gene057348:intron |
| CTTAGACGTCTCACTTTATC+AGG | 0.266369 | 3.3:+78461439 | None:intergenic |
| AGGGTTATGGGAGATCTCTT+TGG | 0.311117 | 3.3:-78460628 | MS.gene057348:CDS |
| CTTATGCAGGTTGGAATTGC+TGG | 0.313742 | 3.3:-78459828 | MS.gene057348:intron |
| TTCGATGGCAAATGAGCTTT+AGG | 0.326162 | 3.3:+78460509 | None:intergenic |
| CCCACACAGGTAAGCATGTT+TGG | 0.326311 | 3.3:+78459643 | None:intergenic |
| CGAATTCCCACTTTCAGTTC+CGG | 0.328773 | 3.3:-78459730 | MS.gene057348:CDS |
| TATTCCACCTTTAGGCTTCC+CGG | 0.346071 | 3.3:+78461483 | None:intergenic |
| CCATCTTACTCCTGATCTTC+AGG | 0.350102 | 3.3:-78462082 | MS.gene057348:CDS |
| GGGTGATTGAATTGGATATA+TGG | 0.356065 | 3.3:-78462337 | MS.gene057348:CDS |
| CTCTGAAGTGCTTTGATGAT+AGG | 0.362421 | 3.3:+78462368 | None:intergenic |
| CCTCCTCTCTTACCTTCCAC+TGG | 0.371999 | 3.3:-78463440 | MS.gene057348:CDS |
| TAGATGGTTACTCAAACATT+TGG | 0.373406 | 3.3:-78461936 | MS.gene057348:CDS |
| CCACAGAAGGGAAAGCCTTT+AGG | 0.373754 | 3.3:-78461777 | MS.gene057348:CDS |
| GGATCGAAAACCTCATTAAT+GGG | 0.374497 | 3.3:+78460530 | None:intergenic |
| CTTCGTTGCGTCAGAATATC+CGG | 0.378354 | 3.3:-78462124 | MS.gene057348:CDS |
| AGGTGTTAGGGTGATTGAAT+TGG | 0.383680 | 3.3:-78462345 | MS.gene057348:CDS |
| CATTCCACTATTCCACCTTT+AGG | 0.387588 | 3.3:+78461475 | None:intergenic |
| AAGCACTTCAGAGAGGTGTT+AGG | 0.389332 | 3.3:-78462358 | MS.gene057348:CDS |
| GCCACTTTGGCCTGAAGATC+AGG | 0.391390 | 3.3:+78462072 | None:intergenic |
| GGTCATAATTCATATCTAAC+TGG | 0.395881 | 3.3:-78462422 | MS.gene057348:CDS |
| GGAGGCACCGCCGGAGATAA+AGG | 0.397895 | 3.3:-78463666 | MS.gene057348:CDS |
| GCCATCGAAAACTACTTTGA+AGG | 0.398900 | 3.3:-78460495 | MS.gene057348:intron |
| CCCACTTTCAGTTCCGGAGC+TGG | 0.406381 | 3.3:-78459724 | MS.gene057348:CDS |
| TTTAGGTGATGAAGAAGCTT+GGG | 0.407451 | 3.3:-78461760 | MS.gene057348:CDS |
| CCTCAATCAGAAAGCTTCTC+AGG | 0.413075 | 3.3:+78463594 | None:intergenic |
| CCTGAGAAGCTTTCTGATTG+AGG | 0.413824 | 3.3:-78463594 | MS.gene057348:CDS |
| GAAACACAAGCCATCATTGA+TGG | 0.419375 | 3.3:-78463542 | MS.gene057348:CDS |
| AGGAGTAAGATGGTCTTCTA+AGG | 0.427795 | 3.3:+78462092 | None:intergenic |
| GATGATGTTGAAGTCCTTCA+TGG | 0.428848 | 3.3:-78462299 | MS.gene057348:CDS |
| TCCTACCTCAGAAACCTTGA+AGG | 0.435352 | 3.3:-78461898 | MS.gene057348:CDS |
| CAAAGTCAATAGAGGATAGT+TGG | 0.441950 | 3.3:-78459776 | MS.gene057348:CDS |
| TCTCCTTTGCGCGAATGTAA+TGG | 0.444524 | 3.3:+78459594 | None:intergenic |
| CATACCCTTGCATAGAAGTC+TGG | 0.448430 | 3.3:+78460274 | None:intergenic |
| AGTTTCTTCAAGTTTCTCTT+CGG | 0.450799 | 3.3:-78463473 | MS.gene057348:CDS |
| TCTTCTAAGGTTATTACAAC+CGG | 0.454332 | 3.3:+78462105 | None:intergenic |
| CAAATTATAATCCATTAATT+GGG | 0.455647 | 3.3:-78460978 | MS.gene057348:CDS |
| ATGCGAAGCAGCGCCAGCTC+CGG | 0.456222 | 3.3:+78459711 | None:intergenic |
| CCGGTTTAAACTCGGCGTAT+TGG | 0.456988 | 3.3:-78463687 | MS.gene057348:CDS |
| CTCCTCTCTTACCTTCCACT+GGG | 0.458800 | 3.3:-78463439 | MS.gene057348:CDS |
| CGCTTAATTGCTATTCATGC+CGG | 0.460356 | 3.3:-78461502 | MS.gene057348:CDS |
| TCTGAAGTGCTTTGATGATA+GGG | 0.461852 | 3.3:+78462369 | None:intergenic |
| AAGGTACTCCTTAGGCGGCT+TGG | 0.465613 | 3.3:+78461830 | None:intergenic |
| TACCATCGTTACTCCGATGA+AGG | 0.467581 | 3.3:-78463638 | MS.gene057348:CDS |
| CCAATACGCCGAGTTTAAAC+CGG | 0.473188 | 3.3:+78463687 | None:intergenic |
| ATAGTACCGCCTCTCAAACT+AGG | 0.474142 | 3.3:+78461726 | None:intergenic |
| CATACGGAAAAGAAATTGTC+AGG | 0.475072 | 3.3:-78461381 | MS.gene057348:intron |
| CCTAAAGGCTTTCCCTTCTG+TGG | 0.479774 | 3.3:+78461777 | None:intergenic |
| GAGGTAATGCGTGTACCTTT+CGG | 0.479808 | 3.3:+78461003 | None:intergenic |
| GTTTAAACTCGGCGTATTGG+AGG | 0.484480 | 3.3:-78463684 | MS.gene057348:CDS |
| AACAAAACCGCATCCTCCAT+TGG | 0.486065 | 3.3:+78460583 | None:intergenic |
| CCATTAATTGGGTGGATGCA+TGG | 0.487420 | 3.3:-78460967 | MS.gene057348:CDS |
| TGTTGATGAAGATGATCTTA+AGG | 0.488941 | 3.3:-78461584 | MS.gene057348:CDS |
| TCTTCAGGCCAAAGTGGCTC+AGG | 0.489930 | 3.3:-78462067 | MS.gene057348:intron |
| GCCAGCTCCGGAACTGAAAG+TGG | 0.492825 | 3.3:+78459723 | None:intergenic |
| GAAAACTGGTCCCATTAATG+AGG | 0.492864 | 3.3:-78460540 | MS.gene057348:CDS |
| GATGGTTGCATTTAACATGC+AGG | 0.494100 | 3.3:-78460938 | MS.gene057348:intron |
| CAAGCTTCTTCATCACCTAA+AGG | 0.494465 | 3.3:+78461762 | None:intergenic |
| AAGGACTTCAACATCATCCT+TGG | 0.496121 | 3.3:+78462304 | None:intergenic |
| TTGGTTGCCTTCTTGGAATG+AGG | 0.497276 | 3.3:-78459757 | MS.gene057348:CDS |
| CTTTAGGTGATGAAGAAGCT+TGG | 0.501759 | 3.3:-78461761 | MS.gene057348:CDS |
| GGAAAATGAGGAACCACAGA+AGG | 0.504129 | 3.3:-78461790 | MS.gene057348:CDS |
| ACATCATCCTTGGAGTCATT+AGG | 0.504800 | 3.3:+78462314 | None:intergenic |
| TCCTTCAAGGTTTCTGAGGT+AGG | 0.514356 | 3.3:+78461897 | None:intergenic |
| AAAAGACGAAAAGGAAAATG+AGG | 0.515925 | 3.3:-78461802 | MS.gene057348:CDS |
| AGCACTTCAGAGAGGTGTTA+GGG | 0.516302 | 3.3:-78462357 | MS.gene057348:CDS |
| CGGTACTATAGCTGATTACA+AGG | 0.516593 | 3.3:-78461712 | MS.gene057348:intron |
| CGGCGTATTGGAGGCACCGC+CGG | 0.517697 | 3.3:-78463675 | MS.gene057348:CDS |
| GTAACTAACCTGAGCCACTT+TGG | 0.519283 | 3.3:+78462059 | None:intergenic |
| CAAGGAATGTTTAAAGCCAA+TGG | 0.521167 | 3.3:-78460599 | MS.gene057348:CDS |
| GAAGCCTAAAGGTGGAATAG+TGG | 0.521864 | 3.3:-78461479 | MS.gene057348:CDS |
| CCTTGAAGCAAAAGACGAAA+AGG | 0.523072 | 3.3:-78461811 | MS.gene057348:CDS |
| ATCGTTACTCCGATGAAGGC+GGG | 0.525010 | 3.3:-78463634 | MS.gene057348:CDS |
| TCACATTATTACATATTCAC+CGG | 0.529900 | 3.3:-78462443 | MS.gene057348:CDS |
| AGGTGAAGGAAATTCCTTCA+AGG | 0.530092 | 3.3:+78461884 | None:intergenic |
| AATTAGGTGACTGTATATAT+GGG | 0.530266 | 3.3:-78460349 | MS.gene057348:intron |
| TGAAGATGATCTTAAGGAGG+AGG | 0.532033 | 3.3:-78461578 | MS.gene057348:CDS |
| CATATCAACCAAGCCGCCTA+AGG | 0.532591 | 3.3:-78461838 | MS.gene057348:CDS |
| TTTGCTTCAAGGTACTCCTT+AGG | 0.533133 | 3.3:+78461822 | None:intergenic |
| ATTATAATCCATTAATTGGG+TGG | 0.536189 | 3.3:-78460975 | MS.gene057348:CDS |
| ATTCATGCCGGGAAGCCTAA+AGG | 0.537834 | 3.3:-78461490 | MS.gene057348:CDS |
| TGTCATAATCCCGCCTTCAT+CGG | 0.543605 | 3.3:+78463625 | None:intergenic |
| TTTAAAGCCAATGGAGGATG+CGG | 0.547215 | 3.3:-78460590 | MS.gene057348:CDS |
| TGGTAAAGGTCCTTTATCTC+CGG | 0.548888 | 3.3:+78463656 | None:intergenic |
| AAGTGAGTCACAGCTCGAAA+AGG | 0.551984 | 3.3:-78461413 | MS.gene057348:CDS |
| TGCAGGCGCCGGTTTAAACT+CGG | 0.554727 | 3.3:-78463695 | None:intergenic |
| GCTTAATTGCTATTCATGCC+GGG | 0.555867 | 3.3:-78461501 | MS.gene057348:CDS |
| CGGATATTCTGACGCAACGA+AGG | 0.555918 | 3.3:+78462125 | None:intergenic |
| TAGTACCGCCTCTCAAACTA+GGG | 0.558608 | 3.3:+78461727 | None:intergenic |
| ACAATGGTAAACTCATATCT+TGG | 0.558961 | 3.3:+78462465 | None:intergenic |
| TAATGGATTATAATTTGATG+AGG | 0.561590 | 3.3:+78460984 | None:intergenic |
| GTGGATGCATGGAGCTCAGA+TGG | 0.561990 | 3.3:-78460956 | MS.gene057348:CDS |
| ATGTCTATGACCATCAATGA+TGG | 0.562595 | 3.3:+78463532 | None:intergenic |
| TTGAGTATCTTTCATCGTAG+AGG | 0.565571 | 3.3:-78463509 | MS.gene057348:CDS |
| TCCTGATCTTCAGGCCAAAG+TGG | 0.568046 | 3.3:-78462073 | MS.gene057348:CDS |
| GAAAAGGCTGCTGAAACATA+CGG | 0.572490 | 3.3:-78461397 | MS.gene057348:CDS |
| GCTTCAAGGTACTCCTTAGG+CGG | 0.576983 | 3.3:+78461825 | None:intergenic |
| CTGAAGTGCTTTGATGATAG+GGG | 0.578401 | 3.3:+78462370 | None:intergenic |
| ATTCCATTACATTCGCGCAA+AGG | 0.578536 | 3.3:-78459597 | MS.gene057348:CDS |
| CATCGGAGTAACGATGGTAA+AGG | 0.582090 | 3.3:+78463642 | None:intergenic |
| CCTGAAGATCAGGAGTAAGA+TGG | 0.584011 | 3.3:+78462082 | None:intergenic |
| AGATCTCTTTGGTTGATGCA+AGG | 0.584104 | 3.3:-78460617 | MS.gene057348:CDS |
| CATCGTTACTCCGATGAAGG+CGG | 0.584531 | 3.3:-78463635 | MS.gene057348:CDS |
| AAAAGGATTACCCCAGTGGA+AGG | 0.585997 | 3.3:+78463428 | None:intergenic |
| TCGAATACCTCATTCCAAGA+AGG | 0.587279 | 3.3:+78459750 | None:intergenic |
| ACCCCAGTGGAAGGTAAGAG+AGG | 0.593533 | 3.3:+78463437 | None:intergenic |
| GTGACTGTATATATGGGAGA+AGG | 0.593969 | 3.3:-78460343 | MS.gene057348:CDS |
| GGTAAACTTACATTCCATGA+AGG | 0.594580 | 3.3:+78462285 | None:intergenic |
| CTGTATATATGGGAGAAGGA+TGG | 0.596370 | 3.3:-78460339 | MS.gene057348:CDS |
| CGCCTTCATCGGAGTAACGA+TGG | 0.598173 | 3.3:+78463636 | None:intergenic |
| CACCTCCAGACTTCTATGCA+AGG | 0.598961 | 3.3:-78460279 | MS.gene057348:CDS |
| AGTTAGATATGAATTATGAC+CGG | 0.599354 | 3.3:+78462424 | None:intergenic |
| TTCTATCTTTAGCAAAACAG+TGG | 0.603639 | 3.3:-78461607 | MS.gene057348:intron |
| AAATTCCTTCAAGGTTTCTG+AGG | 0.606668 | 3.3:+78461893 | None:intergenic |
| ACCTCCAGACTTCTATGCAA+GGG | 0.606755 | 3.3:-78460278 | MS.gene057348:intron |
| GGAGGAAGATTCTGATGAAG+CGG | 0.606856 | 3.3:-78461560 | MS.gene057348:CDS |
| GAAAATGAGGAACCACAGAA+GGG | 0.607163 | 3.3:-78461789 | MS.gene057348:CDS |
| CCAAACATGCTTACCTGTGT+GGG | 0.607645 | 3.3:-78459643 | MS.gene057348:CDS |
| TGATGAAGATGATCTTAAGG+AGG | 0.607713 | 3.3:-78461581 | MS.gene057348:CDS |
| AAAGAAGTCCCTAGTTTGAG+AGG | 0.608524 | 3.3:-78461735 | MS.gene057348:CDS |
| AAACATTTGATAAGTGCCAC+AGG | 0.609405 | 3.3:+78462168 | None:intergenic |
| CCTGTGTGGGAACTAAGAAG+TGG | 0.609701 | 3.3:-78459630 | MS.gene057348:CDS |
| AATATGTAATAATGTGACAA+TGG | 0.610020 | 3.3:+78462449 | None:intergenic |
| TATATGGCCTAATGACTCCA+AGG | 0.611089 | 3.3:-78462321 | MS.gene057348:CDS |
| TCTGAGAAGGATGACTTTGG+TGG | 0.635751 | 3.3:-78459666 | MS.gene057348:CDS |
| CCAGTGGAAGGTAAGAGAGG+AGG | 0.636569 | 3.3:+78463440 | None:intergenic |
| TAAAGGTCCTTTATCTCCGG+CGG | 0.640183 | 3.3:+78463659 | None:intergenic |
| CAGGACATTGACGACTCCTG+TGG | 0.642402 | 3.3:-78462184 | MS.gene057348:CDS |
| CCACTTCTTAGTTCCCACAC+AGG | 0.642948 | 3.3:+78459630 | None:intergenic |
| ACCCTTGCATAGAAGTCTGG+AGG | 0.646972 | 3.3:+78460277 | None:intergenic |
| TGAGTATGACATGTCTGAGA+AGG | 0.650839 | 3.3:-78459679 | MS.gene057348:CDS |
| CCAGCTCCGGAACTGAAAGT+GGG | 0.652112 | 3.3:+78459724 | None:intergenic |
| TTAGGTGATGAAGAAGCTTG+GGG | 0.654802 | 3.3:-78461759 | MS.gene057348:CDS |
| ATGTCTGAGAAGGATGACTT+TGG | 0.654831 | 3.3:-78459669 | MS.gene057348:CDS |
| AATAGTGGAATGTCTCAAAG+TGG | 0.664523 | 3.3:-78461464 | MS.gene057348:CDS |
| GCCAAACATGCTTACCTGTG+TGG | 0.670365 | 3.3:-78459644 | MS.gene057348:CDS |
| CATGAATAGCAATTAAGCGT+CGG | 0.671424 | 3.3:+78461506 | None:intergenic |
| GGAATGTTTAAAGCCAATGG+AGG | 0.677096 | 3.3:-78460596 | MS.gene057348:CDS |
| ATATTGCGAGTGTATCCGAA+AGG | 0.679225 | 3.3:-78461018 | MS.gene057348:CDS |
| GAAGTCCCTAGTTTGAGAGG+CGG | 0.688180 | 3.3:-78461732 | MS.gene057348:CDS |
| CATGCCGGGAAGCCTAAAGG+TGG | 0.692926 | 3.3:-78461487 | MS.gene057348:CDS |
| TCCTCTCTTACCTTCCACTG+GGG | 0.713044 | 3.3:-78463438 | MS.gene057348:intron |
| ATCATCAAAGCACTTCAGAG+AGG | 0.714493 | 3.3:-78462365 | MS.gene057348:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTACAAAAAAAAAAAAAAA+AGG | + | chr3.3:78459863-78459882 | None:intergenic | 10.0% |
| !! | AGCAAAAATAAATATATTAA+TGG | + | chr3.3:78462606-78462625 | None:intergenic | 10.0% |
| !!! | ATTTTTTGATAAATCAATTT+TGG | + | chr3.3:78460544-78460563 | None:intergenic | 10.0% |
| !!! | TTTTTTGATAAATCAATTTT+GGG | + | chr3.3:78460543-78460562 | None:intergenic | 10.0% |
| !! | AAATTTCATTGTAAAAACAA+AGG | + | chr3.3:78460233-78460252 | None:intergenic | 15.0% |
| !! | CAAATTATAATCCATTAATT+GGG | - | chr3.3:78462293-78462312 | MS.gene057348:intron | 15.0% |
| !! | TCAAATAAAATAATTCATTC+AGG | + | chr3.3:78463047-78463066 | None:intergenic | 15.0% |
| !! | TCAAATTATAATCCATTAAT+TGG | - | chr3.3:78462292-78462311 | MS.gene057348:intron | 15.0% |
| !! | TGTAACTCATAATATATATT+GGG | - | chr3.3:78460030-78460049 | MS.gene057348:intron | 15.0% |
| !! | TTGTAACTCATAATATATAT+TGG | - | chr3.3:78460029-78460048 | MS.gene057348:intron | 15.0% |
| !!! | AATATATTTATTTTTGCTGT+GGG | - | chr3.3:78462608-78462627 | MS.gene057348:intron | 15.0% |
| !!! | ATTTAATTTAATAGTCAACA+AGG | + | chr3.3:78459994-78460013 | None:intergenic | 15.0% |
| !!! | ATTTGATTGTGTTTTTTTTT+TGG | - | chr3.3:78459884-78459903 | MS.gene057348:intron | 15.0% |
| !!! | ATTTTGGGTAATAATTTTTA+AGG | - | chr3.3:78462430-78462449 | MS.gene057348:CDS | 15.0% |
| !!! | TAATATATTTATTTTTGCTG+TGG | - | chr3.3:78462607-78462626 | MS.gene057348:intron | 15.0% |
| !!! | TTTTTGATAAATCAATTTTG+GGG | + | chr3.3:78460542-78460561 | None:intergenic | 15.0% |
| !! | AATATGTAATAATGTGACAA+TGG | + | chr3.3:78460825-78460844 | None:intergenic | 20.0% |
| !! | AATGTTGTATATAAATTGCA+AGG | - | chr3.3:78461596-78461615 | MS.gene057348:CDS | 20.0% |
| !! | CTAACTCTATAAATTATGTT+TGG | + | chr3.3:78460568-78460587 | None:intergenic | 20.0% |
| !! | TATCTCATATTTCTTTAATC+CGG | + | chr3.3:78462012-78462031 | None:intergenic | 20.0% |
| !!! | CATTTATATTCAATTAGCTT+TGG | - | chr3.3:78462141-78462160 | MS.gene057348:CDS | 20.0% |
| !!! | GTAATTTTTATGAACTATGT+TGG | - | chr3.3:78460729-78460748 | MS.gene057348:intron | 20.0% |
| !!! | TAATGGATTATAATTTGATG+AGG | + | chr3.3:78462290-78462309 | None:intergenic | 20.0% |
| !!! | TTTAATTTTGTATGTGAGAT+TGG | - | chr3.3:78461622-78461641 | MS.gene057348:intron | 20.0% |
| !!! | TTTTCATAACAGTATCAAAA+GGG | + | chr3.3:78463472-78463491 | None:intergenic | 20.0% |
| !!! | TTTTTCATAACAGTATCAAA+AGG | + | chr3.3:78463473-78463492 | None:intergenic | 20.0% |
| ! | AACCATCTAAAAATTGAACA+GGG | + | chr3.3:78461324-78461343 | None:intergenic | 25.0% |
| ! | AATTAGGTGACTGTATATAT+GGG | - | chr3.3:78462922-78462941 | MS.gene057348:intron | 25.0% |
| ! | AGTTAGATATGAATTATGAC+CGG | + | chr3.3:78460850-78460869 | None:intergenic | 25.0% |
| ! | ATGAATCTTCTTCAAATTGT+TGG | + | chr3.3:78461027-78461046 | None:intergenic | 25.0% |
| ! | ATTATAATCCATTAATTGGG+TGG | - | chr3.3:78462296-78462315 | MS.gene057348:CDS | 25.0% |
| ! | GAAAAAAACAAAGTCAATAG+AGG | - | chr3.3:78463487-78463506 | MS.gene057348:CDS | 25.0% |
| ! | TAAAAGTGATTTGATGTGTT+TGG | - | chr3.3:78460143-78460162 | MS.gene057348:intron | 25.0% |
| ! | TAACCATCTAAAAATTGAAC+AGG | + | chr3.3:78461325-78461344 | None:intergenic | 25.0% |
| ! | TAATTAGGTGACTGTATATA+TGG | - | chr3.3:78462921-78462940 | MS.gene057348:intron | 25.0% |
| ! | TATTTGATAAACTCTTATGC+AGG | - | chr3.3:78463430-78463449 | MS.gene057348:intron | 25.0% |
| ! | TCACATTATTACATATTCAC+CGG | - | chr3.3:78460828-78460847 | MS.gene057348:intron | 25.0% |
| ! | TCATCATGAATTTCTATAAC+TGG | - | chr3.3:78460056-78460075 | MS.gene057348:intron | 25.0% |
| ! | TGTTGGAGATATAATTCAAA+CGG | + | chr3.3:78461010-78461029 | None:intergenic | 25.0% |
| !! | ATAGTTGTTCAGTTTCTTTT+TGG | - | chr3.3:78459925-78459944 | MS.gene057348:intron | 25.0% |
| !! | TAACTTCATTAGTCTATGTT+TGG | - | chr3.3:78460082-78460101 | MS.gene057348:intron | 25.0% |
| !! | TGCTTTTCTTACTCTTAATT+AGG | - | chr3.3:78462906-78462925 | MS.gene057348:intron | 25.0% |
| !! | TGTATGTTTTCTTCTATGTT+TGG | - | chr3.3:78460321-78460340 | MS.gene057348:CDS | 25.0% |
| !! | TTGAGTAATGACTTTTACAA+GGG | - | chr3.3:78462822-78462841 | MS.gene057348:intron | 25.0% |
| !! | TTTGAGTAATGACTTTTACA+AGG | - | chr3.3:78462821-78462840 | MS.gene057348:intron | 25.0% |
| !!! | AGAATCAATTCTAGAATCAA+AGG | - | chr3.3:78460480-78460499 | MS.gene057348:intron | 25.0% |
| !!! | ATCCTTTTTTTAAGTGATTC+AGG | + | chr3.3:78461410-78461429 | None:intergenic | 25.0% |
| !!! | GGATACTGATTGAAAATTTT+GGG | - | chr3.3:78462415-78462434 | MS.gene057348:CDS | 25.0% |
| !!! | TTAGAACACTGTTTTTTAGA+TGG | - | chr3.3:78462070-78462089 | MS.gene057348:CDS | 25.0% |
| AAAAGACGAAAAGGAAAATG+AGG | - | chr3.3:78461469-78461488 | MS.gene057348:CDS | 30.0% | |
| AAAGTGAGTTACAAGTAAAG+TGG | + | chr3.3:78460297-78460316 | None:intergenic | 30.0% | |
| ACAAAATGATGCAATCTTAC+AGG | - | chr3.3:78461068-78461087 | MS.gene057348:intron | 30.0% | |
| ACAATGGTAAACTCATATCT+TGG | + | chr3.3:78460809-78460828 | None:intergenic | 30.0% | |
| ATAACTGGAACATAACTGTT+TGG | + | chr3.3:78463311-78463330 | None:intergenic | 30.0% | |
| CAAATGTTTGACGTCTATTA+AGG | - | chr3.3:78461117-78461136 | MS.gene057348:intron | 30.0% | |
| CAAGTAAAGTGGTTTATGTT+TGG | + | chr3.3:78460286-78460305 | None:intergenic | 30.0% | |
| CACCTGAATCACTTAAAAAA+AGG | - | chr3.3:78461405-78461424 | MS.gene057348:CDS | 30.0% | |
| GGTCATAATTCATATCTAAC+TGG | - | chr3.3:78460849-78460868 | MS.gene057348:intron | 30.0% | |
| TAGATGGTTACTCAAACATT+TGG | - | chr3.3:78461335-78461354 | MS.gene057348:intron | 30.0% | |
| TCTAGACTTGATTCTAACAA+AGG | - | chr3.3:78462880-78462899 | MS.gene057348:intron | 30.0% | |
| TTCTATCTTTAGCAAAACAG+TGG | - | chr3.3:78461664-78461683 | MS.gene057348:intron | 30.0% | |
| TTTAATCCGGTAACAATAAC+AGG | + | chr3.3:78461999-78462018 | None:intergenic | 30.0% | |
| ! | AGTAATTTTACCTGTTGCAT+TGG | - | chr3.3:78461960-78461979 | MS.gene057348:intron | 30.0% |
| ! | AGTTTCTTCAAGTTTCTCTT+CGG | - | chr3.3:78459798-78459817 | MS.gene057348:CDS | 30.0% |
| ! | ATTGATTCTAACTTGAAGCT+AGG | - | chr3.3:78460199-78460218 | MS.gene057348:intron | 30.0% |
| ! | ATTTTGTATGTGAGATTGGT+TGG | - | chr3.3:78461626-78461645 | MS.gene057348:intron | 30.0% |
| ! | CCAGTTTTCAATAGAAAATC+AGG | + | chr3.3:78462720-78462739 | None:intergenic | 30.0% |
| ! | CCTGATTTTCTATTGAAAAC+TGG | - | chr3.3:78462717-78462736 | MS.gene057348:intron | 30.0% |
| ! | CGAAGCATTAGAAAAACATA+TGG | + | chr3.3:78463343-78463362 | None:intergenic | 30.0% |
| ! | GTTGCTGTTAGTAAAATACA+TGG | + | chr3.3:78461050-78461069 | None:intergenic | 30.0% |
| ! | TGAGTAATGACTTTTACAAG+GGG | - | chr3.3:78462823-78462842 | MS.gene057348:intron | 30.0% |
| ! | TGTTGATGAAGATGATCTTA+AGG | - | chr3.3:78461687-78461706 | MS.gene057348:intron | 30.0% |
| ! | TTTTTAGATGGCATATCGAA+CGG | - | chr3.3:78462082-78462101 | MS.gene057348:CDS | 30.0% |
| !! | CGGATACTGATTGAAAATTT+TGG | - | chr3.3:78462414-78462433 | MS.gene057348:CDS | 30.0% |
| !! | TATAGAGTTAGAGTTGCTTT+TGG | - | chr3.3:78460577-78460596 | MS.gene057348:CDS | 30.0% |
| !! | TCTTCTAAGGTTATTACAAC+CGG | + | chr3.3:78461169-78461188 | None:intergenic | 30.0% |
| !!! | ATATTTATTTTTGCTGTGGG+TGG | - | chr3.3:78462611-78462630 | MS.gene057348:intron | 30.0% |
| !!! | TCAGTTTCTTTTTGGTGTTA+TGG | - | chr3.3:78459933-78459952 | MS.gene057348:intron | 30.0% |
| !!! | TCTATGTTTGGTTTTACGTT+TGG | - | chr3.3:78460094-78460113 | MS.gene057348:intron | 30.0% |
| !!! | TTTTTAAGTGATTCAGGTGA+AGG | + | chr3.3:78461404-78461423 | None:intergenic | 30.0% |
| AAAAAAAAGGATTACCCCAG+TGG | + | chr3.3:78459850-78459869 | None:intergenic | 35.0% | |
| AAACATTTGATAAGTGCCAC+AGG | + | chr3.3:78461106-78461125 | None:intergenic | 35.0% | |
| AAATTCCTTCAAGGTTTCTG+AGG | + | chr3.3:78461381-78461400 | None:intergenic | 35.0% | |
| AACCTATCTTAGAGAGCTTA+TGG | + | chr3.3:78463162-78463181 | None:intergenic | 35.0% | |
| AATCGGTGAAACTATTGTCA+AGG | + | chr3.3:78462044-78462063 | None:intergenic | 35.0% | |
| AATGTCTTGATACAGCTGAA+AGG | + | chr3.3:78462535-78462554 | None:intergenic | 35.0% | |
| AGGATCGAAAACCTCATTAA+TGG | + | chr3.3:78462745-78462764 | None:intergenic | 35.0% | |
| AGTCTAGAGACACTTAATGA+TGG | + | chr3.3:78462868-78462887 | None:intergenic | 35.0% | |
| ATATGGATGCTAGCTATAAC+TGG | + | chr3.3:78463326-78463345 | None:intergenic | 35.0% | |
| ATGTCTATGACCATCAATGA+TGG | + | chr3.3:78459742-78459761 | None:intergenic | 35.0% | |
| CAAAGTCAATAGAGGATAGT+TGG | - | chr3.3:78463495-78463514 | MS.gene057348:CDS | 35.0% | |
| CATACGGAAAAGAAATTGTC+AGG | - | chr3.3:78461890-78461909 | MS.gene057348:CDS | 35.0% | |
| CATGAATAGCAATTAAGCGT+CGG | + | chr3.3:78461768-78461787 | None:intergenic | 35.0% | |
| CTCAAATCTCAAAGCTGTAA+AGG | + | chr3.3:78462807-78462826 | None:intergenic | 35.0% | |
| GAACTATGTTGGTGTGATAA+TGG | - | chr3.3:78460740-78460759 | MS.gene057348:intron | 35.0% | |
| GGATCGAAAACCTCATTAAT+GGG | + | chr3.3:78462744-78462763 | None:intergenic | 35.0% | |
| GGGTGATTGAATTGGATATA+TGG | - | chr3.3:78460934-78460953 | MS.gene057348:intron | 35.0% | |
| GGTAAACTTACATTCCATGA+AGG | + | chr3.3:78460989-78461008 | None:intergenic | 35.0% | |
| TAAGTGCATGTTTGAATCTG+CGG | + | chr3.3:78460680-78460699 | None:intergenic | 35.0% | |
| TCAATAACAAGAAACCTGTG+AGG | - | chr3.3:78462384-78462403 | MS.gene057348:CDS | 35.0% | |
| TGATAAACTCTTATGCAGGT+TGG | - | chr3.3:78463434-78463453 | MS.gene057348:intron | 35.0% | |
| TGATGAAGATGATCTTAAGG+AGG | - | chr3.3:78461690-78461709 | MS.gene057348:intron | 35.0% | |
| TGTTGTTCAACACACTCTTA+CGG | - | chr3.3:78460252-78460271 | MS.gene057348:intron | 35.0% | |
| TTCGATCCTGTTATTGTTAC+CGG | - | chr3.3:78461990-78462009 | MS.gene057348:intron | 35.0% | |
| TTGAGTATCTTTCATCGTAG+AGG | - | chr3.3:78459762-78459781 | MS.gene057348:CDS | 35.0% | |
| TTTAGGTGATGAAGAAGCTT+GGG | - | chr3.3:78461511-78461530 | MS.gene057348:CDS | 35.0% | |
| ! | AATAGTGGAATGTCTCAAAG+TGG | - | chr3.3:78461807-78461826 | MS.gene057348:CDS | 35.0% |
| ! | ACCTTCAAAGTAGTTTTCGA+TGG | + | chr3.3:78462780-78462799 | None:intergenic | 35.0% |
| ! | CAAGGAATGTTTAAAGCCAA+TGG | - | chr3.3:78462672-78462691 | MS.gene057348:intron | 35.0% |
| ! | CTGTTTCTTTGTGTGATTTC+AGG | - | chr3.3:78460779-78460798 | MS.gene057348:intron | 35.0% |
| ! | GGTAGTCATCTGATGTATTT+TGG | + | chr3.3:78461747-78461766 | None:intergenic | 35.0% |
| ! | TAGGTGAAGTGATTTGTGTT+TGG | - | chr3.3:78460414-78460433 | MS.gene057348:intron | 35.0% |
| ! | TCTGAAGTGCTTTGATGATA+GGG | + | chr3.3:78460905-78460924 | None:intergenic | 35.0% |
| ! | TGATGTGTTTGGTTTCTCTT+GGG | - | chr3.3:78460154-78460173 | MS.gene057348:intron | 35.0% |
| ! | TTGATGTGTTTGGTTTCTCT+TGG | - | chr3.3:78460153-78460172 | MS.gene057348:intron | 35.0% |
| ! | TTTTGTCTTGACTTTCACTG+TGG | - | chr3.3:78462482-78462501 | MS.gene057348:intron | 35.0% |
| !! | AGCCCTGTTCAATTTTTAGA+TGG | - | chr3.3:78461319-78461338 | MS.gene057348:intron | 35.0% |
| !! | CAGTGTTCTAAGAAGACAAT+CGG | + | chr3.3:78462061-78462080 | None:intergenic | 35.0% |
| !! | GGCACTTGAAAAGCATTATA+AGG | - | chr3.3:78460598-78460617 | MS.gene057348:CDS | 35.0% |
| !! | TTCCATAAGCTCTCTAAGAT+AGG | - | chr3.3:78463157-78463176 | MS.gene057348:intron | 35.0% |
| !! | TTCTATGTTTGGTTCTGCTT+TGG | - | chr3.3:78460332-78460351 | MS.gene057348:CDS | 35.0% |
| AAAGAAGTCCCTAGTTTGAG+AGG | - | chr3.3:78461536-78461555 | MS.gene057348:CDS | 40.0% | |
| AAGGACTTCAACATCATCCT+TGG | + | chr3.3:78460970-78460989 | None:intergenic | 40.0% | |
| ACATCATCCTTGGAGTCATT+AGG | + | chr3.3:78460960-78460979 | None:intergenic | 40.0% | |
| AGGAGTAAGATGGTCTTCTA+AGG | + | chr3.3:78461182-78461201 | None:intergenic | 40.0% | |
| AGGTGAAGGAAATTCCTTCA+AGG | + | chr3.3:78461390-78461409 | None:intergenic | 40.0% | |
| AGGTGTTAGGGTGATTGAAT+TGG | - | chr3.3:78460926-78460945 | MS.gene057348:intron | 40.0% | |
| ATATTGCGAGTGTATCCGAA+AGG | - | chr3.3:78462253-78462272 | MS.gene057348:intron | 40.0% | |
| ATGTCTGAGAAGGATGACTT+TGG | - | chr3.3:78463602-78463621 | MS.gene057348:CDS | 40.0% | |
| ATTCCATTACATTCGCGCAA+AGG | - | chr3.3:78463674-78463693 | MS.gene057348:CDS | 40.0% | |
| CAAGCTTCTTCATCACCTAA+AGG | + | chr3.3:78461512-78461531 | None:intergenic | 40.0% | |
| CATTCCACTATTCCACCTTT+AGG | + | chr3.3:78461799-78461818 | None:intergenic | 40.0% | |
| CCTTGAAGCAAAAGACGAAA+AGG | - | chr3.3:78461460-78461479 | MS.gene057348:CDS | 40.0% | |
| CGGTACTATAGCTGATTACA+AGG | - | chr3.3:78461559-78461578 | MS.gene057348:CDS | 40.0% | |
| CGTGACTAAAAGTGAGTTGT+AGG | - | chr3.3:78460395-78460414 | MS.gene057348:intron | 40.0% | |
| CTGTATATATGGGAGAAGGA+TGG | - | chr3.3:78462932-78462951 | MS.gene057348:intron | 40.0% | |
| CTTAGACGTCTCACTTTATC+AGG | + | chr3.3:78461835-78461854 | None:intergenic | 40.0% | |
| CTTTAGGTGATGAAGAAGCT+TGG | - | chr3.3:78461510-78461529 | MS.gene057348:CDS | 40.0% | |
| GAAAACTGGTCCCATTAATG+AGG | - | chr3.3:78462731-78462750 | MS.gene057348:intron | 40.0% | |
| GAAAAGGCTGCTGAAACATA+CGG | - | chr3.3:78461874-78461893 | MS.gene057348:CDS | 40.0% | |
| GAAAATGAGGAACCACAGAA+GGG | - | chr3.3:78461482-78461501 | MS.gene057348:CDS | 40.0% | |
| GAAACACAAGCCATCATTGA+TGG | - | chr3.3:78459729-78459748 | MS.gene057348:CDS | 40.0% | |
| GATGATGTTGAAGTCCTTCA+TGG | - | chr3.3:78460972-78460991 | MS.gene057348:CDS | 40.0% | |
| GATGGTTGCATTTAACATGC+AGG | - | chr3.3:78462333-78462352 | MS.gene057348:CDS | 40.0% | |
| GCAGATTCAAACATGCACTT+AGG | - | chr3.3:78460679-78460698 | MS.gene057348:intron | 40.0% | |
| GCCATCGAAAACTACTTTGA+AGG | - | chr3.3:78462776-78462795 | MS.gene057348:intron | 40.0% | |
| GTGACTGTATATATGGGAGA+AGG | - | chr3.3:78462928-78462947 | MS.gene057348:intron | 40.0% | |
| TATATGGCCTAATGACTCCA+AGG | - | chr3.3:78460950-78460969 | MS.gene057348:CDS | 40.0% | |
| TCGAATACCTCATTCCAAGA+AGG | + | chr3.3:78463524-78463543 | None:intergenic | 40.0% | |
| TGAAGATGATCTTAAGGAGG+AGG | - | chr3.3:78461693-78461712 | MS.gene057348:intron | 40.0% | |
| TGAGTATGACATGTCTGAGA+AGG | - | chr3.3:78463592-78463611 | MS.gene057348:CDS | 40.0% | |
| TGGTAAAGGTCCTTTATCTC+CGG | + | chr3.3:78459618-78459637 | None:intergenic | 40.0% | |
| TTAGGTGATGAAGAAGCTTG+GGG | - | chr3.3:78461512-78461531 | MS.gene057348:CDS | 40.0% | |
| TTCGATGGCAAATGAGCTTT+AGG | + | chr3.3:78462765-78462784 | None:intergenic | 40.0% | |
| TTGATCCTCTGATTGTTGAC+AGG | - | chr3.3:78462215-78462234 | MS.gene057348:intron | 40.0% | |
| ! | AATGACTTTTACAAGGGGCA+AGG | - | chr3.3:78462828-78462847 | MS.gene057348:intron | 40.0% |
| ! | AGATCTCTTTGGTTGATGCA+AGG | - | chr3.3:78462654-78462673 | MS.gene057348:intron | 40.0% |
| ! | ATCATCAAAGCACTTCAGAG+AGG | - | chr3.3:78460906-78460925 | MS.gene057348:intron | 40.0% |
| ! | ATGACTTTTACAAGGGGCAA+GGG | - | chr3.3:78462829-78462848 | MS.gene057348:intron | 40.0% |
| ! | CCTTTTCGTCTTTTGCTTCA+AGG | + | chr3.3:78461463-78461482 | None:intergenic | 40.0% |
| ! | CGAAAACTACTTTGAAGGTG+AGG | - | chr3.3:78462781-78462800 | MS.gene057348:intron | 40.0% |
| ! | CGCTTAATTGCTATTCATGC+CGG | - | chr3.3:78461769-78461788 | MS.gene057348:CDS | 40.0% |
| ! | CTGAAGTGCTTTGATGATAG+GGG | + | chr3.3:78460904-78460923 | None:intergenic | 40.0% |
| ! | GCTTAATTGCTATTCATGCC+GGG | - | chr3.3:78461770-78461789 | MS.gene057348:CDS | 40.0% |
| ! | GGAATGTTTAAAGCCAATGG+AGG | - | chr3.3:78462675-78462694 | MS.gene057348:intron | 40.0% |
| ! | TTTAAAGCCAATGGAGGATG+CGG | - | chr3.3:78462681-78462700 | MS.gene057348:intron | 40.0% |
| ! | TTTGCTTCAAGGTACTCCTT+AGG | + | chr3.3:78461452-78461471 | None:intergenic | 40.0% |
| !! | CTCTGAAGTGCTTTGATGAT+AGG | + | chr3.3:78460906-78460925 | None:intergenic | 40.0% |
| !! | CTTTGGAACAAACACGTTAC+AGG | - | chr3.3:78462158-78462177 | MS.gene057348:CDS | 40.0% |
| AAAAGGATTACCCCAGTGGA+AGG | + | chr3.3:78459846-78459865 | None:intergenic | 45.0% | |
| AACAAAACCGCATCCTCCAT+TGG | + | chr3.3:78462691-78462710 | None:intergenic | 45.0% | |
| AAGTGAGTCACAGCTCGAAA+AGG | - | chr3.3:78461858-78461877 | MS.gene057348:CDS | 45.0% | |
| ACCTCCAGACTTCTATGCAA+GGG | - | chr3.3:78462993-78463012 | MS.gene057348:intron | 45.0% | |
| AGGATAGTTGGTTGCCTTCT+TGG | - | chr3.3:78463507-78463526 | MS.gene057348:CDS | 45.0% | |
| AGGGTTATGGGAGATCTCTT+TGG | - | chr3.3:78462643-78462662 | MS.gene057348:intron | 45.0% | |
| ATAGTACCGCCTCTCAAACT+AGG | + | chr3.3:78461548-78461567 | None:intergenic | 45.0% | |
| CATACCCTTGCATAGAAGTC+TGG | + | chr3.3:78463000-78463019 | None:intergenic | 45.0% | |
| CATCGGAGTAACGATGGTAA+AGG | + | chr3.3:78459632-78459651 | None:intergenic | 45.0% | |
| CCAAACATGCTTACCTGTGT+GGG | - | chr3.3:78463628-78463647 | MS.gene057348:CDS | 45.0% | |
| CCAATACGCCGAGTTTAAAC+CGG | + | chr3.3:78459587-78459606 | None:intergenic | 45.0% | |
| CCATCTTACTCCTGATCTTC+AGG | - | chr3.3:78461189-78461208 | MS.gene057348:intron | 45.0% | |
| CCATGCATCCACCCAATTAA+TGG | + | chr3.3:78462307-78462326 | None:intergenic | 45.0% | |
| CCATTAATTGGGTGGATGCA+TGG | - | chr3.3:78462304-78462323 | MS.gene057348:CDS | 45.0% | |
| CCTCAATCAGAAAGCTTCTC+AGG | + | chr3.3:78459680-78459699 | None:intergenic | 45.0% | |
| CCTGAAGATCAGGAGTAAGA+TGG | + | chr3.3:78461192-78461211 | None:intergenic | 45.0% | |
| CCTGAGAAGCTTTCTGATTG+AGG | - | chr3.3:78459677-78459696 | MS.gene057348:CDS | 45.0% | |
| CGAATTCCCACTTTCAGTTC+CGG | - | chr3.3:78463541-78463560 | MS.gene057348:CDS | 45.0% | |
| CTTCGTTGCGTCAGAATATC+CGG | - | chr3.3:78461147-78461166 | MS.gene057348:intron | 45.0% | |
| GAAGCCTAAAGGTGGAATAG+TGG | - | chr3.3:78461792-78461811 | MS.gene057348:CDS | 45.0% | |
| GAATCAAGAGCCAATGCAAC+AGG | + | chr3.3:78461973-78461992 | None:intergenic | 45.0% | |
| GAGGTAATGCGTGTACCTTT+CGG | + | chr3.3:78462271-78462290 | None:intergenic | 45.0% | |
| GGAAAATGAGGAACCACAGA+AGG | - | chr3.3:78461481-78461500 | MS.gene057348:CDS | 45.0% | |
| GGAGGAAGATTCTGATGAAG+CGG | - | chr3.3:78461711-78461730 | MS.gene057348:intron | 45.0% | |
| GTAACTAACCTGAGCCACTT+TGG | + | chr3.3:78461215-78461234 | None:intergenic | 45.0% | |
| GTGAACCTGTCAACAATCAG+AGG | + | chr3.3:78462223-78462242 | None:intergenic | 45.0% | |
| GTTTAAACTCGGCGTATTGG+AGG | - | chr3.3:78459587-78459606 | MS.gene057348:CDS | 45.0% | |
| TAAAGGTCCTTTATCTCCGG+CGG | + | chr3.3:78459615-78459634 | None:intergenic | 45.0% | |
| TACCATCGTTACTCCGATGA+AGG | - | chr3.3:78459633-78459652 | MS.gene057348:CDS | 45.0% | |
| TAGTACCGCCTCTCAAACTA+GGG | + | chr3.3:78461547-78461566 | None:intergenic | 45.0% | |
| TATTCCACCTTTAGGCTTCC+CGG | + | chr3.3:78461791-78461810 | None:intergenic | 45.0% | |
| TCCTACCTCAGAAACCTTGA+AGG | - | chr3.3:78461373-78461392 | MS.gene057348:intron | 45.0% | |
| TCTCCTTTGCGCGAATGTAA+TGG | + | chr3.3:78463680-78463699 | None:intergenic | 45.0% | |
| TCTGAGAAGGATGACTTTGG+TGG | - | chr3.3:78463605-78463624 | MS.gene057348:CDS | 45.0% | |
| TCTTGACTTTCACTGTGGTG+AGG | - | chr3.3:78462487-78462506 | MS.gene057348:intron | 45.0% | |
| TGGTTCTTTGGCAGGGTTAT+GGG | - | chr3.3:78462631-78462650 | MS.gene057348:intron | 45.0% | |
| TGTCATAATCCCGCCTTCAT+CGG | + | chr3.3:78459649-78459668 | None:intergenic | 45.0% | |
| TTGGTTGCCTTCTTGGAATG+AGG | - | chr3.3:78463514-78463533 | MS.gene057348:CDS | 45.0% | |
| ! | AGTGGCTCAGGTTAGTTACT+TGG | - | chr3.3:78461216-78461235 | MS.gene057348:intron | 45.0% |
| ! | CTTATGCAGGTTGGAATTGC+TGG | - | chr3.3:78463443-78463462 | MS.gene057348:CDS | 45.0% |
| !! | AAGCACTTCAGAGAGGTGTT+AGG | - | chr3.3:78460913-78460932 | MS.gene057348:intron | 45.0% |
| !! | AGCACTTCAGAGAGGTGTTA+GGG | - | chr3.3:78460914-78460933 | MS.gene057348:intron | 45.0% |
| !! | TCCTTCAAGGTTTCTGAGGT+AGG | + | chr3.3:78461377-78461396 | None:intergenic | 45.0% |
| !! | TTTTGCTGTGGGTGGTTCTT+TGG | - | chr3.3:78462619-78462638 | MS.gene057348:intron | 45.0% |
| !! | TATTAAATTAAATTTGTAAA+TGG | - | chr3.3:78460001-78460020 | MS.gene057348:intron | 5.0% |
| ACCCTTGCATAGAAGTCTGG+AGG | + | chr3.3:78462997-78463016 | None:intergenic | 50.0% | |
| ATCGTTACTCCGATGAAGGC+GGG | - | chr3.3:78459637-78459656 | MS.gene057348:CDS | 50.0% | |
| ATTCATGCCGGGAAGCCTAA+AGG | - | chr3.3:78461781-78461800 | MS.gene057348:CDS | 50.0% | |
| CACCTCCAGACTTCTATGCA+AGG | - | chr3.3:78462992-78463011 | MS.gene057348:intron | 50.0% | |
| CATATCAACCAAGCCGCCTA+AGG | - | chr3.3:78461433-78461452 | MS.gene057348:CDS | 50.0% | |
| CATCGTTACTCCGATGAAGG+CGG | - | chr3.3:78459636-78459655 | MS.gene057348:CDS | 50.0% | |
| CCACAGAAGGGAAAGCCTTT+AGG | - | chr3.3:78461494-78461513 | MS.gene057348:CDS | 50.0% | |
| CCACTTCTTAGTTCCCACAC+AGG | + | chr3.3:78463644-78463663 | None:intergenic | 50.0% | |
| CCCACACAGGTAAGCATGTT+TGG | + | chr3.3:78463631-78463650 | None:intergenic | 50.0% | |
| CCGGTTTAAACTCGGCGTAT+TGG | - | chr3.3:78459584-78459603 | MS.gene057348:CDS | 50.0% | |
| CCTAAAGGCTTTCCCTTCTG+TGG | + | chr3.3:78461497-78461516 | None:intergenic | 50.0% | |
| CCTGTGTGGGAACTAAGAAG+TGG | - | chr3.3:78463641-78463660 | MS.gene057348:CDS | 50.0% | |
| CGGATATTCTGACGCAACGA+AGG | + | chr3.3:78461149-78461168 | None:intergenic | 50.0% | |
| CTCCTCTCTTACCTTCCACT+GGG | - | chr3.3:78459832-78459851 | MS.gene057348:intron | 50.0% | |
| GAAACCTGTGAGGTCTAGCA+CGG | - | chr3.3:78462394-78462413 | MS.gene057348:CDS | 50.0% | |
| GAAGTCCCTAGTTTGAGAGG+CGG | - | chr3.3:78461539-78461558 | MS.gene057348:CDS | 50.0% | |
| GCCAAACATGCTTACCTGTG+TGG | - | chr3.3:78463627-78463646 | MS.gene057348:CDS | 50.0% | |
| GTGGTTCTTTGGCAGGGTTA+TGG | - | chr3.3:78462630-78462649 | MS.gene057348:intron | 50.0% | |
| TCCTCTCTTACCTTCCACTG+GGG | - | chr3.3:78459833-78459852 | MS.gene057348:intron | 50.0% | |
| TCCTGATCTTCAGGCCAAAG+TGG | - | chr3.3:78461198-78461217 | MS.gene057348:intron | 50.0% | |
| ! | GCTTCAAGGTACTCCTTAGG+CGG | + | chr3.3:78461449-78461468 | None:intergenic | 50.0% |
| ACCCCAGTGGAAGGTAAGAG+AGG | + | chr3.3:78459837-78459856 | None:intergenic | 55.0% | |
| CAGGACATTGACGACTCCTG+TGG | - | chr3.3:78461087-78461106 | MS.gene057348:intron | 55.0% | |
| CCAGCTCCGGAACTGAAAGT+GGG | + | chr3.3:78463550-78463569 | None:intergenic | 55.0% | |
| CCAGTGGAAGGTAAGAGAGG+AGG | + | chr3.3:78459834-78459853 | None:intergenic | 55.0% | |
| CCTCCTCTCTTACCTTCCAC+TGG | - | chr3.3:78459831-78459850 | MS.gene057348:intron | 55.0% | |
| CGCCTTCATCGGAGTAACGA+TGG | + | chr3.3:78459638-78459657 | None:intergenic | 55.0% | |
| CTGTGGGTGGTTCTTTGGCA+GGG | - | chr3.3:78462624-78462643 | MS.gene057348:intron | 55.0% | |
| GTATCCGTGCTAGACCTCAC+AGG | + | chr3.3:78462401-78462420 | None:intergenic | 55.0% | |
| GTGGATGCATGGAGCTCAGA+TGG | - | chr3.3:78462315-78462334 | MS.gene057348:CDS | 55.0% | |
| TCTTCAGGCCAAAGTGGCTC+AGG | - | chr3.3:78461204-78461223 | MS.gene057348:intron | 55.0% | |
| ! | AAGGTACTCCTTAGGCGGCT+TGG | + | chr3.3:78461444-78461463 | None:intergenic | 55.0% |
| ! | GCCACTTTGGCCTGAAGATC+AGG | + | chr3.3:78461202-78461221 | None:intergenic | 55.0% |
| CATGCCGGGAAGCCTAAAGG+TGG | - | chr3.3:78461784-78461803 | MS.gene057348:CDS | 60.0% | |
| CCCACTTTCAGTTCCGGAGC+TGG | - | chr3.3:78463547-78463566 | MS.gene057348:CDS | 60.0% | |
| GCCAGCTCCGGAACTGAAAG+TGG | + | chr3.3:78463551-78463570 | None:intergenic | 60.0% | |
| GCTGTGGGTGGTTCTTTGGC+AGG | - | chr3.3:78462623-78462642 | MS.gene057348:intron | 60.0% | |
| !! | GGAGGCACCGCCGGAGATAA+AGG | - | chr3.3:78459605-78459624 | MS.gene057348:CDS | 65.0% |
| !! | CGGCGTATTGGAGGCACCGC+CGG | - | chr3.3:78459596-78459615 | MS.gene057348:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 78459581 | 78463712 | 78459581 | ID=MS.gene057348 |
| chr3.3 | mRNA | 78459581 | 78463712 | 78459581 | ID=MS.gene057348.t1;Parent=MS.gene057348 |
| chr3.3 | exon | 78463439 | 78463712 | 78463439 | ID=MS.gene057348.t1.exon1;Parent=MS.gene057348.t1 |
| chr3.3 | CDS | 78463439 | 78463712 | 78463439 | ID=cds.MS.gene057348.t1;Parent=MS.gene057348.t1 |
| chr3.3 | exon | 78462296 | 78462492 | 78462296 | ID=MS.gene057348.t1.exon2;Parent=MS.gene057348.t1 |
| chr3.3 | CDS | 78462296 | 78462492 | 78462296 | ID=cds.MS.gene057348.t1;Parent=MS.gene057348.t1 |
| chr3.3 | exon | 78462068 | 78462203 | 78462068 | ID=MS.gene057348.t1.exon3;Parent=MS.gene057348.t1 |
| chr3.3 | CDS | 78462068 | 78462203 | 78462068 | ID=cds.MS.gene057348.t1;Parent=MS.gene057348.t1 |
| chr3.3 | exon | 78461713 | 78461955 | 78461713 | ID=MS.gene057348.t1.exon4;Parent=MS.gene057348.t1 |
| chr3.3 | CDS | 78461713 | 78461955 | 78461713 | ID=cds.MS.gene057348.t1;Parent=MS.gene057348.t1 |
| chr3.3 | exon | 78461382 | 78461617 | 78461382 | ID=MS.gene057348.t1.exon5;Parent=MS.gene057348.t1 |
| chr3.3 | CDS | 78461382 | 78461617 | 78461382 | ID=cds.MS.gene057348.t1;Parent=MS.gene057348.t1 |
| chr3.3 | exon | 78460939 | 78461056 | 78460939 | ID=MS.gene057348.t1.exon6;Parent=MS.gene057348.t1 |
| chr3.3 | CDS | 78460939 | 78461056 | 78460939 | ID=cds.MS.gene057348.t1;Parent=MS.gene057348.t1 |
| chr3.3 | exon | 78460496 | 78460648 | 78460496 | ID=MS.gene057348.t1.exon7;Parent=MS.gene057348.t1 |
| chr3.3 | CDS | 78460496 | 78460648 | 78460496 | ID=cds.MS.gene057348.t1;Parent=MS.gene057348.t1 |
| chr3.3 | exon | 78460279 | 78460365 | 78460279 | ID=MS.gene057348.t1.exon8;Parent=MS.gene057348.t1 |
| chr3.3 | CDS | 78460279 | 78460365 | 78460279 | ID=cds.MS.gene057348.t1;Parent=MS.gene057348.t1 |
| chr3.3 | exon | 78459581 | 78459841 | 78459581 | ID=MS.gene057348.t1.exon9;Parent=MS.gene057348.t1 |
| chr3.3 | CDS | 78459581 | 78459841 | 78459581 | ID=cds.MS.gene057348.t1;Parent=MS.gene057348.t1 |
| Gene Sequence |
| Protein sequence |
