AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057354

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057354.t1 MTR_3g069520 90.984 366 33 0 67 432 3 368 0.0 688
MS.gene057354.t1 MTR_3g069780 88.410 371 37 3 67 433 3 371 0.0 659
MS.gene057354.t1 MTR_3g438030 88.140 371 38 3 67 433 3 371 0.0 657
MS.gene057354.t1 MTR_3g448360 78.919 370 74 4 67 433 3 371 0.0 588
MS.gene057354.t1 MTR_3g463960 64.844 384 117 4 67 432 4 387 0.0 511
MS.gene057354.t1 MTR_3g463950 64.844 384 117 4 67 432 4 387 0.0 511
MS.gene057354.t1 MTR_3g463970 64.844 384 117 4 67 432 4 387 0.0 511
MS.gene057354.t1 MTR_3g463940 64.844 384 117 4 67 432 4 387 0.0 511
MS.gene057354.t1 MTR_2g079090 66.486 370 106 6 67 432 3 358 4.81e-175 494
MS.gene057354.t1 MTR_0029s0050 67.302 367 102 6 70 432 6 358 3.48e-174 491
MS.gene057354.t1 MTR_3g463930 63.265 392 117 7 67 432 4 394 5.30e-173 490
MS.gene057354.t1 MTR_2g079080 65.946 370 108 6 67 432 3 358 1.51e-172 487
MS.gene057354.t1 MTR_0029s0100 67.030 367 103 6 70 432 6 358 3.39e-172 486
MS.gene057354.t1 MTR_2g043980 58.649 370 131 7 67 432 9 360 7.95e-147 422
MS.gene057354.t1 MTR_2g015650 50.133 375 169 5 69 432 6 373 1.12e-123 363
MS.gene057354.t1 MTR_2g015670 49.157 356 157 7 84 432 21 359 3.04e-109 327
MS.gene057354.t1 MTR_2g015630 44.509 346 176 5 99 433 36 376 7.93e-95 290
MS.gene057354.t1 MTR_2g043990 52.055 292 111 6 67 354 71 337 8.82e-94 286
MS.gene057354.t1 MTR_2g015580 43.014 365 187 7 69 423 27 380 1.52e-91 282
MS.gene057354.t1 MTR_2g015590 43.695 341 179 7 92 423 29 365 8.82e-91 280
MS.gene057354.t1 MTR_3g466240 54.299 221 69 3 165 381 2 194 1.42e-72 226
MS.gene057354.t1 MTR_4g104240 37.026 343 195 11 91 423 36 367 4.12e-67 219
MS.gene057354.t1 MTR_2g015590 43.382 272 145 5 92 355 29 299 1.06e-65 214
MS.gene057354.t1 MTR_3g466190 65.269 167 38 3 119 285 7 153 1.24e-64 207
MS.gene057354.t1 MTR_3g466190 82.051 78 14 0 356 433 152 229 1.85e-37 136
MS.gene057354.t1 MTR_8g028160 33.244 373 221 13 70 423 11 374 9.44e-50 173
MS.gene057354.t1 MTR_7g116870 33.989 356 205 11 92 431 31 372 1.44e-49 173
MS.gene057354.t1 MTR_7g087190 30.997 371 224 10 82 432 31 389 1.99e-49 173
MS.gene057354.t1 MTR_1g030220 32.958 355 205 10 92 426 38 379 2.55e-47 167
MS.gene057354.t1 MTR_1g030340 32.821 390 215 14 68 432 18 385 9.37e-47 166
MS.gene057354.t1 MTR_1g030268 33.333 354 203 10 92 426 38 377 1.93e-46 165
MS.gene057354.t1 MTR_1g030230 33.058 363 208 11 84 425 22 370 3.62e-44 158
MS.gene057354.t1 MTR_6g007090 32.493 357 209 9 84 423 29 370 2.06e-43 156
MS.gene057354.t1 MTR_7g111780 31.965 341 205 13 94 425 36 358 2.25e-43 156
MS.gene057354.t1 MTR_8g089805 30.423 355 215 9 92 425 38 381 2.69e-43 156
MS.gene057354.t1 MTR_7g113860 33.151 365 190 17 90 423 25 366 8.07e-43 155
MS.gene057354.t1 MTR_1g030275 33.429 350 206 9 92 425 37 375 2.30e-42 154
MS.gene057354.t1 MTR_7g113860 30.469 384 219 16 67 423 10 372 2.71e-42 154
MS.gene057354.t1 MTR_7g033150 32.979 376 202 15 84 428 25 381 3.28e-41 150
MS.gene057354.t1 MTR_7g033165 30.508 354 212 8 92 424 31 371 3.42e-40 148
MS.gene057354.t1 MTR_6g007095 31.105 389 226 12 65 429 5 375 3.37e-39 150
MS.gene057354.t1 MTR_6g007095 27.647 340 197 11 105 425 381 690 1.03e-27 116
MS.gene057354.t1 MTR_7g033155 30.423 378 216 11 86 428 30 395 4.81e-39 145
MS.gene057354.t1 MTR_8g038680 31.373 357 202 15 92 423 26 364 7.95e-36 135
MS.gene057354.t1 MTR_1g082390 30.618 356 208 14 84 416 21 360 1.34e-35 135
MS.gene057354.t1 MTR_1g030268 32.364 275 166 6 92 355 38 303 2.20e-34 131
MS.gene057354.t1 MTR_8g031420 28.571 385 227 16 63 425 2 360 9.48e-31 122
MS.gene057354.t1 MTR_8g022810 30.904 343 184 16 93 412 40 352 1.51e-30 121
MS.gene057354.t1 MTR_6g007100 31.143 350 205 15 92 429 31 356 2.36e-30 120
MS.gene057354.t1 MTR_1g030265 30.820 305 176 11 142 425 53 343 3.37e-30 120
MS.gene057354.t1 MTR_7g111780 31.086 267 161 10 166 425 9 259 7.80e-29 114
MS.gene057354.t1 MTR_8g031430 28.800 375 224 15 68 425 14 362 1.12e-28 116
MS.gene057354.t1 MTR_7g033165 30.651 261 165 4 92 341 31 286 1.08e-27 112
MS.gene057354.t1 MTR_8g031390 29.070 344 203 14 89 418 32 348 3.41e-27 112
MS.gene057354.t1 MTR_1g025780 28.324 346 194 16 94 417 41 354 7.49e-27 110
MS.gene057354.t1 MTR_8g031400 28.448 348 201 14 89 418 32 349 8.69e-27 110
MS.gene057354.t1 MTR_8g014910 28.142 366 218 14 67 416 11 347 9.01e-27 110
MS.gene057354.t1 MTR_1g025680 29.360 344 195 14 94 417 34 349 9.31e-27 112
MS.gene057354.t1 MTR_7g113860 29.032 310 175 14 140 423 8 298 3.62e-26 108
MS.gene057354.t1 MTR_2g033930 29.674 337 204 12 94 418 32 347 5.94e-26 108
MS.gene057354.t1 MTR_4g056280 28.212 358 217 13 76 416 10 344 1.31e-25 107
MS.gene057354.t1 MTR_8g089805 27.000 300 187 9 147 425 25 313 2.28e-25 106
MS.gene057354.t1 MTR_2g015080 28.493 365 216 17 69 411 15 356 3.94e-25 106
MS.gene057354.t1 MTR_5g022630 28.219 365 220 13 66 411 13 354 4.83e-25 105
MS.gene057354.t1 MTR_2g100620 27.353 340 206 13 94 416 31 346 1.33e-24 104
MS.gene057354.t1 MTR_1g025700 28.070 342 201 15 94 417 50 364 1.50e-24 104
MS.gene057354.t1 MTR_4g056160 28.060 335 212 10 94 416 27 344 2.72e-24 103
MS.gene057354.t1 MTR_3g098270 29.683 347 201 16 92 419 32 354 3.38e-24 103
MS.gene057354.t1 MTR_1g025720 29.118 340 194 14 92 412 35 346 6.23e-24 102
MS.gene057354.t1 MTR_8g012540 29.102 323 200 12 92 396 26 337 8.37e-24 102
MS.gene057354.t1 MTR_2g044100 27.809 356 209 16 87 421 36 364 1.09e-23 102
MS.gene057354.t1 MTR_1g025760 30.029 343 194 15 94 417 80 395 1.46e-23 102
MS.gene057354.t1 MTR_1g025910 29.722 360 207 15 79 417 15 349 2.91e-23 100
MS.gene057354.t1 MTR_3g052490 30.172 348 203 15 94 424 32 356 3.68e-23 100
MS.gene057354.t1 MTR_3g464730 29.944 354 199 18 84 417 20 344 9.01e-23 99.4
MS.gene057354.t1 MTR_4g087985 28.409 352 206 16 93 418 35 366 1.40e-22 99.0
MS.gene057354.t1 MTR_5g022640 27.322 366 233 14 66 417 13 359 2.09e-22 98.6
MS.gene057354.t1 MTR_5g009100 27.893 337 213 11 96 421 48 365 3.54e-22 97.8
MS.gene057354.t1 MTR_8g031390 29.605 304 177 13 89 382 32 308 4.95e-22 96.7
MS.gene057354.t1 MTR_4g122200 28.065 367 215 14 84 431 27 363 1.33e-21 96.3
MS.gene057354.t1 MTR_5g084750 27.826 345 207 13 94 421 30 349 2.05e-21 95.5
MS.gene057354.t1 MTR_5g084790 27.811 338 216 11 94 421 32 351 1.35e-20 92.8
MS.gene057354.t1 MTR_2g033920 28.161 348 199 13 93 418 34 352 1.62e-20 92.8
MS.gene057354.t1 MTR_3g082830 26.331 338 221 10 94 421 38 357 2.51e-20 92.4
MS.gene057354.t1 MTR_3g005650 27.246 345 210 14 94 423 30 348 3.04e-20 92.0
MS.gene057354.t1 MTR_8g079050 28.609 381 220 19 67 424 15 366 5.66e-20 91.3
MS.gene057354.t1 MTR_5g078210 26.627 338 208 14 98 420 29 341 6.45e-20 90.9
MS.gene057354.t1 MTR_3g052580 28.693 352 202 16 94 424 27 350 9.02e-20 91.3
MS.gene057354.t1 MTR_1g060490 27.515 338 199 16 91 415 34 338 9.07e-20 90.5
MS.gene057354.t1 MTR_3g052480 30.259 347 201 17 94 422 33 356 1.11e-19 90.5
MS.gene057354.t1 MTR_1g024890 27.920 351 219 14 87 423 25 355 1.12e-19 90.5
MS.gene057354.t1 MTR_3g052580 28.693 352 202 16 94 424 28 351 1.32e-19 90.5
MS.gene057354.t1 MTR_5g084770 28.490 351 204 15 85 416 21 343 2.22e-19 89.4
MS.gene057354.t1 MTR_5g074270 27.083 336 211 16 92 413 31 346 3.10e-19 89.0
MS.gene057354.t1 MTR_3g114090 29.070 344 204 16 90 417 32 351 7.19e-19 87.8
MS.gene057354.t1 MTR_7g116510 28.488 344 211 15 93 422 24 346 1.13e-18 87.4
MS.gene057354.t1 MTR_3g023220 27.492 331 183 15 95 407 34 325 1.73e-18 86.7
MS.gene057354.t1 MTR_4g035353 25.137 366 220 14 82 423 19 354 2.37e-18 86.7
MS.gene057354.t1 MTR_7g116520 26.271 354 209 17 93 423 33 357 2.48e-18 86.7
MS.gene057354.t1 MTR_3g005660 27.628 333 206 17 96 413 38 350 2.99e-18 86.3
MS.gene057354.t1 MTR_8g022790 24.855 346 212 10 89 418 32 345 8.85e-18 84.7
MS.gene057354.t1 MTR_0009s0250 26.087 322 194 13 94 397 33 328 1.25e-17 84.3
MS.gene057354.t1 MTR_5g078210 26.748 329 189 13 98 413 29 318 1.66e-17 83.6
MS.gene057354.t1 MTR_5g083040 26.724 348 215 16 94 422 32 358 1.80e-17 84.0
MS.gene057354.t1 MTR_1g060500 27.746 346 196 17 91 415 37 349 1.96e-17 83.6
MS.gene057354.t1 MTR_2g084585 26.269 335 215 12 94 416 30 344 6.63e-17 82.0
MS.gene057354.t1 MTR_0565s0010 24.405 336 210 14 96 413 34 343 7.08e-17 82.0
MS.gene057354.t1 MTR_8g087890 26.190 336 203 15 96 413 33 341 7.64e-17 82.0
MS.gene057354.t1 MTR_7g116570 25.067 371 239 16 66 422 9 354 7.65e-17 82.0
MS.gene057354.t1 MTR_8g075200 26.579 380 223 16 67 417 4 356 1.34e-16 81.6
MS.gene057354.t1 MTR_7g116500 26.575 365 218 16 79 422 18 353 3.39e-16 80.1
MS.gene057354.t1 MTR_4g108690 25.740 338 211 13 96 417 29 342 5.39e-16 79.3
MS.gene057354.t1 MTR_3g435540 26.389 360 216 14 96 429 25 361 8.52e-16 79.0
MS.gene057354.t1 MTR_8g075220 25.364 343 219 13 92 417 38 360 1.27e-15 78.6
MS.gene057354.t1 MTR_8g022810 32.057 209 107 10 93 283 40 231 1.53e-15 77.8
MS.gene057354.t1 MTR_3g114120 26.531 343 195 17 94 412 47 356 1.70e-15 78.2
MS.gene057354.t1 MTR_6g021530 26.039 361 221 18 81 422 17 350 8.50e-15 75.9
MS.gene057354.t1 MTR_1g092750 23.385 325 214 9 95 411 41 338 2.96e-14 73.9
MS.gene057354.t1 MTR_5g093090 26.062 353 211 12 94 424 28 352 5.80e-14 73.2
MS.gene057354.t1 MTR_7g104220 25.672 335 202 14 95 415 43 344 6.65e-14 73.2
MS.gene057354.t1 MTR_1g079530 26.934 349 195 16 93 418 28 339 2.05e-13 71.6
MS.gene057354.t1 MTR_8g074570 25.581 344 210 13 95 418 39 356 5.53e-13 70.5
MS.gene057354.t1 MTR_2g033920 27.046 281 168 10 93 355 34 295 8.32e-13 69.3
MS.gene057354.t1 MTR_3g021460 23.392 342 208 10 94 418 31 335 1.03e-12 69.3
MS.gene057354.t1 MTR_8g087870 27.168 346 202 17 95 423 30 342 6.85e-12 67.0
MS.gene057354.t1 MTR_2g017965 25.356 351 208 19 95 423 34 352 7.70e-12 67.0
MS.gene057354.t1 MTR_3g024510 23.881 335 212 14 96 413 40 348 1.92e-11 65.9
MS.gene057354.t1 MTR_5g087690 24.012 329 220 9 94 414 50 356 3.01e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057354.t1 AT5G45910 46.132 349 170 9 90 424 26 370 6.84e-101 305
MS.gene057354.t1 AT1G28610 42.982 342 181 6 93 425 30 366 1.09e-90 280
MS.gene057354.t1 AT1G28580 40.936 342 187 7 92 423 35 371 5.71e-85 265
MS.gene057354.t1 AT2G27360 41.691 343 184 8 92 423 31 368 7.88e-85 265
MS.gene057354.t1 AT1G28570 42.105 342 183 7 92 423 32 368 1.54e-84 264
MS.gene057354.t1 AT1G31550 40.108 369 202 10 67 423 8 369 8.87e-84 262
MS.gene057354.t1 AT1G28590 40.290 345 191 7 92 426 34 373 1.18e-83 262
MS.gene057354.t1 AT1G28600 40.730 356 194 8 79 423 15 364 1.97e-83 261
MS.gene057354.t1 AT1G31550 39.837 369 200 11 67 423 8 366 1.66e-80 254
MS.gene057354.t1 AT1G28670 39.481 347 190 8 92 425 33 372 5.32e-79 249
MS.gene057354.t1 AT1G28660 40.058 347 187 9 92 425 33 371 8.38e-79 249
MS.gene057354.t1 AT1G28640 39.017 346 192 7 92 425 33 371 1.06e-78 249
MS.gene057354.t1 AT1G28660 40.346 347 185 10 92 425 33 370 1.66e-77 246
MS.gene057354.t1 AT1G28650 38.663 344 196 7 92 425 35 373 4.38e-76 242
MS.gene057354.t1 AT1G28580 38.832 291 169 5 137 423 5 290 1.01e-66 216
MS.gene057354.t1 AT3G48460 35.942 345 198 9 91 423 35 368 8.21e-61 202
MS.gene057354.t1 AT5G03980 33.431 341 179 8 79 415 14 310 2.66e-51 176
MS.gene057354.t1 AT4G01130 32.676 355 202 10 92 423 32 372 5.09e-50 174
MS.gene057354.t1 AT1G28570 41.981 212 116 4 216 423 88 296 2.13e-49 171
MS.gene057354.t1 AT1G28570 42.308 208 113 4 220 423 1 205 3.06e-49 167
MS.gene057354.t1 AT1G54790 33.518 361 194 14 90 423 28 369 3.36e-44 159
MS.gene057354.t1 AT1G56670 31.161 353 202 13 94 430 40 367 1.05e-43 157
MS.gene057354.t1 AT5G14450 32.591 359 205 13 92 429 39 381 6.84e-43 155
MS.gene057354.t1 AT1G67830 31.092 357 208 11 85 415 21 365 7.19e-43 155
MS.gene057354.t1 AT1G54790 32.609 368 200 15 84 423 21 368 8.20e-42 152
MS.gene057354.t1 AT3G05180 32.967 364 207 14 79 421 24 371 8.24e-41 149
MS.gene057354.t1 AT3G62280 30.747 348 211 12 85 423 31 357 6.29e-40 147
MS.gene057354.t1 AT1G09390 31.232 349 207 13 94 430 37 364 8.24e-40 146
MS.gene057354.t1 AT3G26430 29.915 351 222 6 92 425 29 372 8.49e-40 147
MS.gene057354.t1 AT1G54790 30.769 390 204 16 84 423 21 394 1.66e-38 144
MS.gene057354.t1 AT1G28600 40.102 197 106 5 79 266 15 208 4.91e-36 132
MS.gene057354.t1 AT1G28610 40.323 186 102 3 93 271 30 213 6.86e-36 133
MS.gene057354.t1 AT4G01130 32.130 277 165 6 92 355 32 298 2.63e-34 130
MS.gene057354.t1 AT1G71120 29.204 339 199 11 94 418 31 342 1.81e-30 121
MS.gene057354.t1 AT3G27950 28.857 350 218 9 92 425 30 364 1.83e-30 121
MS.gene057354.t1 AT1G73610 28.358 335 199 12 93 417 34 337 3.89e-29 117
MS.gene057354.t1 AT1G56670 30.325 277 159 10 94 355 40 297 1.93e-28 114
MS.gene057354.t1 AT1G06990 29.060 351 214 14 84 420 27 356 4.60e-28 114
MS.gene057354.t1 AT1G20120 29.577 355 193 16 92 420 76 399 1.22e-27 114
MS.gene057354.t1 AT2G40250 27.143 350 224 12 85 420 26 358 1.50e-27 112
MS.gene057354.t1 AT1G20132 28.198 344 199 14 94 417 61 376 5.27e-27 112
MS.gene057354.t1 AT1G23500 26.593 361 224 14 69 418 9 339 8.06e-27 110
MS.gene057354.t1 AT4G10950 28.363 342 212 13 90 418 66 387 1.09e-26 111
MS.gene057354.t1 AT4G01130 27.667 300 180 10 147 423 1 286 2.01e-26 108
MS.gene057354.t1 AT1G53920 29.248 359 206 16 94 432 48 378 3.71e-26 109
MS.gene057354.t1 AT3G14225 28.613 346 203 15 94 419 37 358 7.37e-26 108
MS.gene057354.t1 AT5G45950 28.571 336 200 13 94 416 40 348 7.80e-26 108
MS.gene057354.t1 AT1G53940 30.925 346 197 15 93 419 38 360 8.22e-26 108
MS.gene057354.t1 AT3G14225 28.940 349 202 16 94 419 37 362 1.87e-25 107
MS.gene057354.t1 AT3G16370 28.531 354 212 14 84 421 22 350 8.14e-25 105
MS.gene057354.t1 AT1G75880 28.144 334 212 12 94 417 52 367 1.40e-24 104
MS.gene057354.t1 AT5G40990 29.301 372 219 16 68 419 11 358 2.00e-24 104
MS.gene057354.t1 AT1G75890 25.510 392 254 15 42 417 23 392 2.55e-24 104
MS.gene057354.t1 AT4G10950 28.070 342 209 14 90 418 66 383 3.74e-24 103
MS.gene057354.t1 AT1G75890 26.400 375 238 15 59 417 11 363 6.52e-24 102
MS.gene057354.t1 AT1G75880 29.167 336 207 14 94 417 52 368 9.39e-24 102
MS.gene057354.t1 AT5G63170 26.911 327 195 12 94 408 28 322 1.51e-23 101
MS.gene057354.t1 AT1G75890 27.013 385 236 16 59 417 11 376 2.05e-23 101
MS.gene057354.t1 AT2G42990 29.630 324 196 13 94 405 28 331 3.45e-23 100
MS.gene057354.t1 AT1G20130 28.080 349 200 14 94 417 184 506 3.63e-23 102
MS.gene057354.t1 AT1G75920 27.353 340 203 12 92 417 27 336 5.18e-23 99.8
MS.gene057354.t1 AT1G20130 28.080 349 200 13 94 417 204 526 6.23e-23 101
MS.gene057354.t1 AT3G62280 28.417 278 175 9 85 355 31 291 6.56e-23 98.6
MS.gene057354.t1 AT4G26790 26.627 338 216 13 92 417 27 344 1.19e-22 99.0
MS.gene057354.t1 AT4G26790 26.627 338 216 13 92 417 27 344 1.19e-22 99.0
MS.gene057354.t1 AT2G31540 27.887 355 222 13 82 420 22 358 1.94e-22 98.6
MS.gene057354.t1 AT5G42170 28.529 340 196 15 95 416 51 361 2.21e-22 98.6
MS.gene057354.t1 AT1G75930 26.870 361 219 15 72 416 4 335 9.52e-22 96.3
MS.gene057354.t1 AT5G45960 26.331 338 213 13 94 415 47 364 1.28e-21 96.3
MS.gene057354.t1 AT2G30310 27.978 361 222 16 69 412 7 346 1.80e-21 95.5
MS.gene057354.t1 AT5G15720 27.679 336 203 13 94 412 30 342 1.95e-21 95.5
MS.gene057354.t1 AT1G75900 27.327 333 213 13 94 416 43 356 2.55e-21 95.1
MS.gene057354.t1 AT2G04570 27.397 365 226 16 70 420 7 346 2.74e-21 95.1
MS.gene057354.t1 AT2G03980 28.528 326 203 12 92 407 41 346 6.02e-21 94.4
MS.gene057354.t1 AT2G03980 28.528 326 203 12 92 407 41 346 6.02e-21 94.4
MS.gene057354.t1 AT2G03980 28.528 326 203 12 92 407 41 346 6.02e-21 94.4
MS.gene057354.t1 AT2G03980 28.528 326 203 12 92 407 41 346 6.02e-21 94.4
MS.gene057354.t1 AT4G28780 28.488 344 210 16 93 422 30 351 7.01e-21 94.0
MS.gene057354.t1 AT1G71250 26.012 346 218 13 94 423 41 364 1.02e-20 93.6
MS.gene057354.t1 AT1G59406 27.647 340 203 14 94 417 30 342 1.69e-20 92.8
MS.gene057354.t1 AT1G59030 27.647 340 203 14 94 417 30 342 1.69e-20 92.8
MS.gene057354.t1 AT1G58725 27.647 340 203 14 94 417 30 342 1.69e-20 92.8
MS.gene057354.t1 AT2G23540 28.753 393 230 19 51 418 4 371 1.95e-20 92.8
MS.gene057354.t1 AT1G20135 25.068 367 208 14 65 411 7 326 2.22e-20 92.0
MS.gene057354.t1 AT3G04290 27.988 343 213 13 93 422 28 349 2.54e-20 92.4
MS.gene057354.t1 AT1G54000 26.549 339 202 13 91 415 33 338 3.34e-20 92.4
MS.gene057354.t1 AT5G08460 27.778 342 201 14 92 412 47 363 3.81e-20 92.0
MS.gene057354.t1 AT1G75920 26.582 316 191 11 113 417 23 308 4.63e-20 90.9
MS.gene057354.t1 AT3G14210 27.697 343 197 15 90 415 32 340 6.68e-20 91.7
MS.gene057354.t1 AT5G22810 28.080 349 213 15 84 416 25 351 1.38e-19 90.1
MS.gene057354.t1 AT1G75920 26.479 355 202 13 92 417 22 346 2.10e-19 89.4
MS.gene057354.t1 AT3G09930 27.326 344 201 13 85 411 30 341 2.79e-19 89.4
MS.gene057354.t1 AT3G09930 27.326 344 201 13 85 411 30 341 2.79e-19 89.4
MS.gene057354.t1 AT1G53990 25.135 370 232 14 67 419 8 349 6.69e-19 88.2
MS.gene057354.t1 AT2G30220 27.049 366 218 15 69 412 7 345 7.39e-19 87.8
MS.gene057354.t1 AT5G18430 24.928 349 218 13 93 422 27 350 1.55e-18 87.0
MS.gene057354.t1 AT1G58430 25.664 339 216 14 92 415 33 350 2.35e-18 86.7
MS.gene057354.t1 AT1G29670 27.795 331 203 16 96 413 34 341 3.23e-18 86.3
MS.gene057354.t1 AT1G53940 31.047 277 160 11 93 355 38 297 4.29e-18 85.1
MS.gene057354.t1 AT1G58520 26.844 339 200 13 94 417 30 335 5.98e-18 85.1
MS.gene057354.t1 AT1G58525 26.844 339 200 13 94 417 30 335 5.98e-18 85.1
MS.gene057354.t1 AT1G29670 28.097 331 202 16 96 413 102 409 1.90e-17 84.3
MS.gene057354.t1 AT2G19010 26.575 365 218 14 76 423 8 339 3.42e-17 82.8
MS.gene057354.t1 AT1G71691 27.536 345 210 15 94 423 55 374 9.95e-17 82.0
MS.gene057354.t1 AT2G19010 26.649 379 222 15 68 423 24 369 1.20e-16 81.6
MS.gene057354.t1 AT2G19050 26.136 352 200 14 96 425 33 346 3.98e-16 79.7
MS.gene057354.t1 AT5G03610 24.024 333 217 10 95 417 44 350 4.41e-16 79.7
MS.gene057354.t1 AT5G37690 24.251 334 211 13 98 415 31 338 5.79e-16 79.3
MS.gene057354.t1 AT1G33811 26.361 349 215 18 95 423 35 361 5.94e-16 79.3
MS.gene057354.t1 AT5G15720 27.007 274 177 9 94 355 30 292 9.32e-16 78.2
MS.gene057354.t1 AT5G41890 26.781 351 205 16 96 418 33 359 1.57e-15 78.2
MS.gene057354.t1 AT3G14220 22.951 366 227 15 73 418 7 337 2.67e-15 77.4
MS.gene057354.t1 AT2G19060 26.286 350 196 15 96 421 32 343 4.28e-15 76.6
MS.gene057354.t1 AT1G74460 26.176 340 207 14 96 417 25 338 4.32e-15 77.0
MS.gene057354.t1 AT3G53100 24.551 334 222 12 94 416 29 343 9.42e-15 75.5
MS.gene057354.t1 AT5G55050 27.479 353 207 16 95 424 40 366 1.29e-14 75.5
MS.gene057354.t1 AT2G36325 25.373 335 206 13 95 416 48 351 2.34e-14 74.7
MS.gene057354.t1 AT1G75920 25.664 339 179 12 92 417 27 305 2.68e-14 73.9
MS.gene057354.t1 AT5G03600 24.471 331 210 10 89 411 9 307 3.42e-14 73.6
MS.gene057354.t1 AT5G03600 23.861 373 239 12 50 411 4 342 6.62e-14 73.2
MS.gene057354.t1 AT1G71691 28.958 259 153 11 94 339 55 295 8.22e-14 72.4
MS.gene057354.t1 AT4G30140 25.581 344 202 15 96 423 35 340 2.68e-13 71.2
MS.gene057354.t1 AT5G15720 26.897 290 168 13 141 412 48 311 1.07e-12 69.3
MS.gene057354.t1 AT2G04020 30.093 216 126 10 92 294 41 244 1.03e-11 65.5
MS.gene057354.t1 AT2G24560 25.939 293 192 12 85 364 24 304 1.70e-11 65.5
MS.gene057354.t1 AT5G37690 23.054 334 207 14 98 415 31 330 3.11e-11 65.1
MS.gene057354.t1 AT1G54030 22.561 328 207 12 93 411 51 340 4.16e-11 65.1
MS.gene057354.t1 AT2G04020 30.660 212 122 10 92 290 41 240 5.10e-11 63.9

Find 97 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTTCAAAACTAATAAAT+TGG 0.141859 3.1:-56823932 MS.gene057354:CDS
TTCTTTGGTGTTACACAATA+AGG 0.159526 3.1:+56824833 None:intergenic
CATGATGTTGTGTAGGGTTC+TGG 0.225739 3.1:+56826301 None:intergenic
AAAGAAGACTATGATGAATT+TGG 0.241383 3.1:-56824321 MS.gene057354:CDS
TCGCAGTTCTGAAATAGTTT+TGG 0.269806 3.1:+56824640 None:intergenic
AGTTAGGACAAAACCTTCTT+TGG 0.290406 3.1:+56824818 None:intergenic
TATCAAGCACCACAACAATT+TGG 0.294441 3.1:-56824165 MS.gene057354:intron
CCCAGAGATATGGGTCCTTA+TGG 0.303014 3.1:-56825336 MS.gene057354:CDS
ATTTGATTACCCCAGAGATA+TGG 0.312920 3.1:-56825346 MS.gene057354:CDS
CATTAAATGTGCAATTTGAT+TGG 0.321915 3.1:-56824872 MS.gene057354:CDS
GGTGATTCTGTAAGTGATAC+TGG 0.340202 3.1:-56825378 MS.gene057354:CDS
TATGAAGCCATCTTCAACTT+TGG 0.350482 3.1:-56825399 MS.gene057354:CDS
TTTAATGAGTTATCTTTCTC+TGG 0.377478 3.1:+56824888 None:intergenic
CTGCACACCCTCCTGTTAGA+AGG 0.381501 3.1:-56826365 MS.gene057354:CDS
GCGAGAGATAGTTCCCTTGA+TGG 0.382382 3.1:-56824621 MS.gene057354:CDS
GCGGTAGAGTTAGTGGTTCC+AGG 0.391216 3.1:-56824399 MS.gene057354:CDS
TCTTTGGTGTTACACAATAA+GGG 0.393980 3.1:+56824834 None:intergenic
GGCTGAGCAGCAGGCGGTAC+CGG 0.397886 3.1:-56826238 MS.gene057354:CDS
AAATACTGATCATGATGATA+TGG 0.398824 3.1:+56823987 None:intergenic
CAGTCGCGTCCCCTTCTAAC+AGG 0.414455 3.1:+56826354 None:intergenic
TATTTGCTTATAAGCGGCTT+CGG 0.415948 3.1:+56823893 None:intergenic
AGTTATCTTTCTCTGGTGTA+AGG 0.416314 3.1:+56824895 None:intergenic
CGACTAATCATAGACTTCAT+AGG 0.419613 3.1:-56825270 MS.gene057354:intron
TTTGATTACCCCAGAGATAT+GGG 0.419732 3.1:-56825345 MS.gene057354:CDS
AGAAGGAGCGGTAGAGTTAG+TGG 0.422002 3.1:-56824406 MS.gene057354:CDS
GAAGGGTGAGGCTGAGCAGC+AGG 0.424746 3.1:-56826247 MS.gene057354:CDS
TTGTTTATAGTGGGAGAGAT+TGG 0.429569 3.1:-56824689 MS.gene057354:CDS
TAAACTATCTTGAAAGGAGC+AGG 0.432894 3.1:+56823825 None:intergenic
TCCTTCAAAACTAATAAATT+GGG 0.433608 3.1:-56823931 MS.gene057354:CDS
GATGCCAAGTGCAGTTGAAC+CGG 0.439072 3.1:+56824941 None:intergenic
AATATACTATCTTAGCTTGT+GGG 0.439870 3.1:+56824217 None:intergenic
ACCATAAGGACCCATATCTC+TGG 0.443546 3.1:+56825335 None:intergenic
TTTAGAGAAGGATATGCAAA+AGG 0.444049 3.1:+56823849 None:intergenic
CCTGCCTACCCGTGCACTCA+TGG 0.444317 3.1:+56826392 None:intergenic
TTAACTGTAGCTGAGGCATA+TGG 0.452881 3.1:-56825041 MS.gene057354:intron
ATAGCTAAAGGTTTAATTGA+AGG 0.457396 3.1:-56823873 MS.gene057354:CDS
TATCAGGCTTTAATTGAAGA+AGG 0.458250 3.1:-56824423 MS.gene057354:intron
GAGTGCACGGGTAGGCAGGC+AGG 0.459642 3.1:-56826388 MS.gene057354:CDS
TTCGGTATCACCTTTGCATG+TGG 0.460520 3.1:-56825462 MS.gene057354:CDS
ATGAAGATCTTCATTCTCTT+CGG 0.462847 3.1:-56825480 MS.gene057354:intron
TTTGATTGAATCAACCATCA+AGG 0.470104 3.1:+56824607 None:intergenic
CCATGAGTGCACGGGTAGGC+AGG 0.471500 3.1:-56826392 MS.gene057354:CDS
ATGATGTTGTGTAGGGTTCT+GGG 0.471592 3.1:+56826302 None:intergenic
GCATCGGGACGCATGTCAAA+TGG 0.472663 3.1:-56825294 MS.gene057354:CDS
TTAAAGTACGTTGAACCATA+AGG 0.472963 3.1:+56825321 None:intergenic
ATCAAATATTTCAGTGGTAG+TGG 0.479428 3.1:-56824921 MS.gene057354:CDS
AACGTACTTTAAACATGCAT+CGG 0.490676 3.1:-56825310 MS.gene057354:CDS
TCGGTATCACCTTTGCATGT+GGG 0.494073 3.1:-56825461 MS.gene057354:CDS
AGAATCACCAAAGTTGAAGA+TGG 0.494636 3.1:+56825392 None:intergenic
CACCCCATTGGAAAGTTCCC+TGG 0.497541 3.1:+56824381 None:intergenic
GCTTATAAGCAAATAGCTAA+AGG 0.500430 3.1:-56823885 MS.gene057354:CDS
TTATTGTGTAACACCAAAGA+AGG 0.504644 3.1:-56824831 MS.gene057354:intron
AAAGCATGTTGTGGAGGAAG+TGG 0.510426 3.1:-56824011 MS.gene057354:CDS
ACGTACTTTAAACATGCATC+GGG 0.510518 3.1:-56825309 MS.gene057354:CDS
GTTCCAGGGAACTTTCCAAT+GGG 0.514992 3.1:-56824384 MS.gene057354:CDS
TTTATAGTGGGAGAGATTGG+TGG 0.518109 3.1:-56824686 MS.gene057354:CDS
TTGATTGAATCAACCATCAA+GGG 0.523996 3.1:+56824608 None:intergenic
TGCACACCCTCCTGTTAGAA+GGG 0.527051 3.1:-56826364 MS.gene057354:CDS
TTTAGCTATTTGCTTATAAG+CGG 0.529705 3.1:+56823887 None:intergenic
CCATAAGGACCCATATCTCT+GGG 0.530553 3.1:+56825336 None:intergenic
TGAGCAGCCGCAACATCAGA+AGG 0.534182 3.1:-56826265 MS.gene057354:CDS
ACTGGTCTGGGTGCAAACTC+CGG 0.538510 3.1:+56826219 None:intergenic
TGATTCTAAACTATCTTGAA+AGG 0.547988 3.1:+56823819 None:intergenic
CGCGACTGCGAACGTAAGAG+TGG 0.548738 3.1:-56826339 MS.gene057354:CDS
AAATATACTATCTTAGCTTG+TGG 0.550904 3.1:+56824216 None:intergenic
AAGATGGCTTCATACGGTAG+AGG 0.556476 3.1:+56825408 None:intergenic
TGCGAACGTAAGAGTGGGGA+GGG 0.562487 3.1:-56826333 MS.gene057354:CDS
GGTTCCAGGGAACTTTCCAA+TGG 0.563863 3.1:-56824385 MS.gene057354:CDS
GCCTCACCCTTCTGATGTTG+CGG 0.570914 3.1:+56826258 None:intergenic
GCCGCAACATCAGAAGGGTG+AGG 0.575508 3.1:-56826259 MS.gene057354:CDS
CGGTAGAGTTAGTGGTTCCA+GGG 0.577023 3.1:-56824398 MS.gene057354:CDS
GCTCCTCATGATGTTGTGTA+GGG 0.577224 3.1:+56826295 None:intergenic
GGCTCCTCATGATGTTGTGT+AGG 0.577371 3.1:+56826294 None:intergenic
TCGCGTCCCCTTCTAACAGG+AGG 0.579744 3.1:+56826357 None:intergenic
CGCGTCCCCTTCTAACAGGA+GGG 0.580285 3.1:+56826358 None:intergenic
TTAGAGAAGGATATGCAAAA+GGG 0.585091 3.1:+56823850 None:intergenic
AGACGATGACCATGAGTGCA+CGG 0.589355 3.1:-56826401 None:intergenic
TATGCCGGTTCAACTGCACT+TGG 0.594009 3.1:-56824945 MS.gene057354:CDS
GGCTTTAATTGAAGAAGGAG+CGG 0.599772 3.1:-56824418 MS.gene057354:CDS
ATGTCAGTATTACACCCCAT+TGG 0.600994 3.1:+56824369 None:intergenic
AAGTTGAAGATGGCTTCATA+CGG 0.604507 3.1:+56825402 None:intergenic
CTCCACCCACCAAATTGTTG+TGG 0.605350 3.1:+56824156 None:intergenic
GCGACTGCGAACGTAAGAGT+GGG 0.608027 3.1:-56826338 MS.gene057354:CDS
GACGATGACCATGAGTGCAC+GGG 0.609395 3.1:-56826400 None:intergenic
CTTGGCATCAAATATTTCAG+TGG 0.611650 3.1:-56824927 MS.gene057354:CDS
TCAAAACTAATAAATTGGGA+TGG 0.614495 3.1:-56823927 MS.gene057354:CDS
CTGCGAACGTAAGAGTGGGG+AGG 0.632484 3.1:-56826334 MS.gene057354:CDS
GGGTGAGGCTGAGCAGCAGG+CGG 0.634220 3.1:-56826244 MS.gene057354:CDS
TGTTGCGGCTGCTCATGATG+AGG 0.636983 3.1:+56826273 None:intergenic
TTCCAGGGAACTTTCCAATG+GGG 0.642288 3.1:-56824383 MS.gene057354:CDS
GCACACCCTCCTGTTAGAAG+GGG 0.648005 3.1:-56826363 MS.gene057354:CDS
GAACCCTACACAACATCATG+AGG 0.656698 3.1:-56826298 MS.gene057354:CDS
GAGCAGCCGCAACATCAGAA+GGG 0.662709 3.1:-56826264 MS.gene057354:CDS
CGACTGCGAACGTAAGAGTG+GGG 0.701780 3.1:-56826337 MS.gene057354:CDS
ATGACCATGAGTGCACGGGT+AGG 0.704658 3.1:-56826396 MS.gene057354:CDS
GCGAACGTAAGAGTGGGGAG+GGG 0.735649 3.1:-56826332 MS.gene057354:CDS
CATAAGGACCCATATCTCTG+GGG 0.759622 3.1:+56825337 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTTTACAAAAATAAAAAT+AGG - chr3.1:56824578-56824597 MS.gene057354:intron 10.0%
!! TTTATTTAATTATGTTTATC+AGG - chr3.1:56825781-56825800 MS.gene057354:intron 10.0%
!!! ATATTTCACTTTTTTTTTTT+AGG + chr3.1:56824251-56824270 None:intergenic 10.0%
!! AAAAAATCATTGTTTATAGT+GGG - chr3.1:56825522-56825541 MS.gene057354:intron 15.0%
!! AAAATATTACTTAAGATAAC+AGG + chr3.1:56824085-56824104 None:intergenic 15.0%
!! AACTTAAGTAATTAAATGTT+TGG - chr3.1:56825661-56825680 MS.gene057354:intron 15.0%
!! ACTTAAGTAATTAAATGTTT+GGG - chr3.1:56825662-56825681 MS.gene057354:intron 15.0%
!! TATCAAATAAATAACAATCT+TGG - chr3.1:56825742-56825761 MS.gene057354:intron 15.0%
!!! ACTATTTTAATTTCTTTTGT+GGG - chr3.1:56824399-56824418 MS.gene057354:CDS 15.0%
!!! TACTATTTTAATTTCTTTTG+TGG - chr3.1:56824398-56824417 MS.gene057354:CDS 15.0%
!!! TTATTTTTGTATTCATGAAA+TGG - chr3.1:56825006-56825025 MS.gene057354:CDS 15.0%
!! AAAAAAGTGAAATATCATTG+TGG - chr3.1:56824256-56824275 MS.gene057354:CDS 20.0%
!! AAAAAGTGAAATATCATTGT+GGG - chr3.1:56824257-56824276 MS.gene057354:CDS 20.0%
!! AAATCAATGAAAACTTAACA+TGG + chr3.1:56826104-56826123 None:intergenic 20.0%
!! AATGAACATAAATTAATGCA+TGG + chr3.1:56826150-56826169 None:intergenic 20.0%
!! ATCCTTCAAAACTAATAAAT+TGG - chr3.1:56826288-56826307 MS.gene057354:CDS 20.0%
!! ATGAACATAAATTAATGCAT+GGG + chr3.1:56826149-56826168 None:intergenic 20.0%
!! CAAAAAATCATTGTTTATAG+TGG - chr3.1:56825521-56825540 MS.gene057354:intron 20.0%
!! TCCTTCAAAACTAATAAATT+GGG - chr3.1:56826289-56826308 MS.gene057354:CDS 20.0%
!!! AAGTTTTGTATAACATACAA+TGG + chr3.1:56825646-56825665 None:intergenic 20.0%
!!! AATTATTGTGTTTGAGTTAT+AGG - chr3.1:56825716-56825735 MS.gene057354:intron 20.0%
!!! ATAGATTATTTTAGAGTTCT+TGG + chr3.1:56825076-56825095 None:intergenic 20.0%
! AAAGAAGACTATGATGAATT+TGG - chr3.1:56825899-56825918 MS.gene057354:intron 25.0%
! AAATACTGATCATGATGATA+TGG + chr3.1:56826236-56826255 None:intergenic 25.0%
! AAGATATCTATTTGTTTGAG+AGG - chr3.1:56824425-56824444 MS.gene057354:intron 25.0%
! AATCCATGGTGATATAAAAA+AGG - chr3.1:56825238-56825257 MS.gene057354:intron 25.0%
! AGAAACAAAAGAATGTGTAA+AGG + chr3.1:56824978-56824997 None:intergenic 25.0%
! ATAGCTAAAGGTTTAATTGA+AGG - chr3.1:56826347-56826366 MS.gene057354:CDS 25.0%
! ATCCATGGTGATATAAAAAA+GGG - chr3.1:56825239-56825258 MS.gene057354:intron 25.0%
! ATTCATTAATGATTATGCGT+TGG - chr3.1:56824540-56824559 MS.gene057354:intron 25.0%
! CATTAAATGTGCAATTTGAT+TGG - chr3.1:56825348-56825367 MS.gene057354:CDS 25.0%
! TCAAAACTAATAAATTGGGA+TGG - chr3.1:56826293-56826312 MS.gene057354:CDS 25.0%
! TCTATTATACTCACACAATA+GGG + chr3.1:56824317-56824336 None:intergenic 25.0%
! TGCAAATATGTGGAAATTTA+TGG - chr3.1:56824280-56824299 MS.gene057354:CDS 25.0%
! TTCATTAATGATTATGCGTT+GGG - chr3.1:56824541-56824560 MS.gene057354:intron 25.0%
! TTCTATTATACTCACACAAT+AGG + chr3.1:56824318-56824337 None:intergenic 25.0%
! TTTAATGAGTTATCTTTCTC+TGG + chr3.1:56825335-56825354 None:intergenic 25.0%
! TTTAGCTATTTGCTTATAAG+CGG + chr3.1:56826336-56826355 None:intergenic 25.0%
! TTTATGTTCATTAATGATGC+AGG - chr3.1:56826158-56826177 MS.gene057354:intron 25.0%
!! AAATATACTATCTTAGCTTG+TGG + chr3.1:56826007-56826026 None:intergenic 25.0%
!! TTTTATATCACCATGGATTT+TGG + chr3.1:56825237-56825256 None:intergenic 25.0%
!! TTTTGTATAACATACAATGG+TGG + chr3.1:56825643-56825662 None:intergenic 25.0%
!!! AATATACTATCTTAGCTTGT+GGG + chr3.1:56826006-56826025 None:intergenic 25.0%
!!! ATTATTTTAGAGTTCTTGGT+AGG + chr3.1:56825072-56825091 None:intergenic 25.0%
!!! ATTTTAATTTCTTTTGTGGG+TGG - chr3.1:56824402-56824421 MS.gene057354:CDS 25.0%
!!! GATTTCTCTAATTTTTTAGC+TGG + chr3.1:56824614-56824633 None:intergenic 25.0%
!!! GATTTTGGTGACATTTTTAT+AGG + chr3.1:56825222-56825241 None:intergenic 25.0%
!!! TCCCAATTTATTAGTTTTGA+AGG + chr3.1:56826293-56826312 None:intergenic 25.0%
!!! TTGTTATGATCTCTAGTTTT+AGG - chr3.1:56824356-56824375 MS.gene057354:CDS 25.0%
!!! TTTCTGTTTTATTGTCTCTA+TGG + chr3.1:56825981-56826000 None:intergenic 25.0%
AAAAATGTCACCAAAATCCA+TGG - chr3.1:56825224-56825243 MS.gene057354:intron 30.0%
AACGTACTTTAAACATGCAT+CGG - chr3.1:56824910-56824929 MS.gene057354:CDS 30.0%
ATAGAAAGATAGCAAAGAAC+TGG + chr3.1:56824713-56824732 None:intergenic 30.0%
ATCAAATATTTCAGTGGTAG+TGG - chr3.1:56825299-56825318 MS.gene057354:CDS 30.0%
ATCGTTTCATAACAGGATAA+AGG - chr3.1:56824631-56824650 MS.gene057354:CDS 30.0%
ATGAAGATCTTCATTCTCTT+CGG - chr3.1:56824740-56824759 MS.gene057354:intron 30.0%
GCTTATAAGCAAATAGCTAA+AGG - chr3.1:56826335-56826354 MS.gene057354:CDS 30.0%
TAGAGAAATCGTTTCATAAC+AGG - chr3.1:56824624-56824643 MS.gene057354:CDS 30.0%
TTAAAGTACGTTGAACCATA+AGG + chr3.1:56824902-56824921 None:intergenic 30.0%
TTAGAGAAGGATATGCAAAA+GGG + chr3.1:56826373-56826392 None:intergenic 30.0%
TTATTGTGTAACACCAAAGA+AGG - chr3.1:56825389-56825408 MS.gene057354:CDS 30.0%
TTGATTGAATCAACCATCAA+GGG + chr3.1:56825615-56825634 None:intergenic 30.0%
TTTAGAGAAGGATATGCAAA+AGG + chr3.1:56826374-56826393 None:intergenic 30.0%
TTTGATTGAATCAACCATCA+AGG + chr3.1:56825616-56825635 None:intergenic 30.0%
! TATCAGGCTTTAATTGAAGA+AGG - chr3.1:56825797-56825816 MS.gene057354:intron 30.0%
! TTTTTATAGGCCGGTAAAAA+TGG + chr3.1:56825209-56825228 None:intergenic 30.0%
!! CATCATGATCAGTATTTTTG+TGG - chr3.1:56826239-56826258 MS.gene057354:CDS 30.0%
!! TCTTTGGTGTTACACAATAA+GGG + chr3.1:56825389-56825408 None:intergenic 30.0%
!! TTCTTTGGTGTTACACAATA+AGG + chr3.1:56825390-56825409 None:intergenic 30.0%
!!! ATATGGTTTGCCATTTTTAC+CGG - chr3.1:56825196-56825215 MS.gene057354:intron 30.0%
!!! CTGAAATAGTTTTGGAAAGA+TGG + chr3.1:56825575-56825594 None:intergenic 30.0%
AAGTTGAAGATGGCTTCATA+CGG + chr3.1:56824821-56824840 None:intergenic 35.0%
ACGTACTTTAAACATGCATC+GGG - chr3.1:56824911-56824930 MS.gene057354:CDS 35.0%
AGAATCACCAAAGTTGAAGA+TGG + chr3.1:56824831-56824850 None:intergenic 35.0%
AGTAGAAGCAACAGATTAGT+AGG + chr3.1:56824042-56824061 None:intergenic 35.0%
AGTTAGGACAAAACCTTCTT+TGG + chr3.1:56825405-56825424 None:intergenic 35.0%
AGTTATCTTTCTCTGGTGTA+AGG + chr3.1:56825328-56825347 None:intergenic 35.0%
ATTTGATTACCCCAGAGATA+TGG - chr3.1:56824874-56824893 MS.gene057354:CDS 35.0%
CGACTAATCATAGACTTCAT+AGG - chr3.1:56824950-56824969 MS.gene057354:CDS 35.0%
CTTGGCATCAAATATTTCAG+TGG - chr3.1:56825293-56825312 MS.gene057354:CDS 35.0%
GAAGAGAATGAAGATCTTCA+TGG + chr3.1:56824741-56824760 None:intergenic 35.0%
TAAACTATCTTGAAAGGAGC+AGG + chr3.1:56826398-56826417 None:intergenic 35.0%
TATCAAGCACCACAACAATT+TGG - chr3.1:56826055-56826074 MS.gene057354:intron 35.0%
TATGAAGCCATCTTCAACTT+TGG - chr3.1:56824821-56824840 MS.gene057354:intron 35.0%
TATTTGCTTATAAGCGGCTT+CGG + chr3.1:56826330-56826349 None:intergenic 35.0%
TTTGATTACCCCAGAGATAT+GGG - chr3.1:56824875-56824894 MS.gene057354:CDS 35.0%
! CCAAAAAAAGTAACTGGTCT+GGG + chr3.1:56824016-56824035 None:intergenic 35.0%
! GGAGTTAATTTTGCTTATGC+CGG - chr3.1:56825260-56825279 MS.gene057354:intron 35.0%
! TTGTTTATAGTGGGAGAGAT+TGG - chr3.1:56825531-56825550 MS.gene057354:intron 35.0%
!! ATTTTGAAAGCATGTTGTGG+AGG - chr3.1:56826203-56826222 MS.gene057354:intron 35.0%
!! GAGATTTTGAAAGCATGTTG+TGG - chr3.1:56826200-56826219 MS.gene057354:intron 35.0%
!! TTGGTGACATTTTTATAGGC+CGG + chr3.1:56825218-56825237 None:intergenic 35.0%
!!! CCAGACCAGTTACTTTTTTT+GGG - chr3.1:56824014-56824033 MS.gene057354:CDS 35.0%
!!! CTCCCTTTTTTATATCACCA+TGG + chr3.1:56825244-56825263 None:intergenic 35.0%
!!! TCGCAGTTCTGAAATAGTTT+TGG + chr3.1:56825583-56825602 None:intergenic 35.0%
AAAGTAGCAAGCAAGGAGTT+AGG + chr3.1:56825421-56825440 None:intergenic 40.0%
AAGCACCACAACAATTTGGT+GGG - chr3.1:56826059-56826078 MS.gene057354:intron 40.0%
AGGAGCCCAAAAAAAGTAAC+TGG + chr3.1:56824022-56824041 None:intergenic 40.0%
ATGATGTTGTGTAGGGTTCT+GGG + chr3.1:56823921-56823940 None:intergenic 40.0%
ATGTCAGTATTACACCCCAT+TGG + chr3.1:56825854-56825873 None:intergenic 40.0%
CCCAAAAAAAGTAACTGGTC+TGG + chr3.1:56824017-56824036 None:intergenic 40.0%
GGTGATTCTGTAAGTGATAC+TGG - chr3.1:56824842-56824861 MS.gene057354:CDS 40.0%
TCACACAAAAGTAGCAAGCA+AGG + chr3.1:56825428-56825447 None:intergenic 40.0%
TCACATTCTGTGAACTCACA+AGG + chr3.1:56825492-56825511 None:intergenic 40.0%
TCATTGTGGGTGCAAATATG+TGG - chr3.1:56824270-56824289 MS.gene057354:CDS 40.0%
TCTCATGTTAACTGTAGCTG+AGG - chr3.1:56825172-56825191 MS.gene057354:intron 40.0%
TTAACTGTAGCTGAGGCATA+TGG - chr3.1:56825179-56825198 MS.gene057354:intron 40.0%
! GGCTTTAATTGAAGAAGGAG+CGG - chr3.1:56825802-56825821 MS.gene057354:intron 40.0%
! TTTATAGTGGGAGAGATTGG+TGG - chr3.1:56825534-56825553 MS.gene057354:intron 40.0%
!!! AAAGGAGCAGGTTTTAGAGA+AGG + chr3.1:56826386-56826405 None:intergenic 40.0%
!!! CCCAGACCAGTTACTTTTTT+TGG - chr3.1:56824013-56824032 MS.gene057354:CDS 40.0%
AAAGCATGTTGTGGAGGAAG+TGG - chr3.1:56826209-56826228 MS.gene057354:intron 45.0%
AAGATGGCTTCATACGGTAG+AGG + chr3.1:56824815-56824834 None:intergenic 45.0%
ACCATAAGGACCCATATCTC+TGG + chr3.1:56824888-56824907 None:intergenic 45.0%
CAAGCACCACAACAATTTGG+TGG - chr3.1:56826058-56826077 MS.gene057354:intron 45.0%
CATAAGGACCCATATCTCTG+GGG + chr3.1:56824886-56824905 None:intergenic 45.0%
CATGATGTTGTGTAGGGTTC+TGG + chr3.1:56823922-56823941 None:intergenic 45.0%
CCATAAGGACCCATATCTCT+GGG + chr3.1:56824887-56824906 None:intergenic 45.0%
GAACCCTACACAACATCATG+AGG - chr3.1:56823922-56823941 MS.gene057354:CDS 45.0%
GCTCCTCATGATGTTGTGTA+GGG + chr3.1:56823928-56823947 None:intergenic 45.0%
GTTCCAGGGAACTTTCCAAT+GGG - chr3.1:56825836-56825855 MS.gene057354:intron 45.0%
TCCAAAAAGCCCACATGCAA+AGG + chr3.1:56824771-56824790 None:intergenic 45.0%
TCGGTATCACCTTTGCATGT+GGG - chr3.1:56824759-56824778 MS.gene057354:intron 45.0%
TTCCAGGGAACTTTCCAATG+GGG - chr3.1:56825837-56825856 MS.gene057354:intron 45.0%
TTCGGTATCACCTTTGCATG+TGG - chr3.1:56824758-56824777 MS.gene057354:intron 45.0%
! ACCTTTGCATGTGGGCTTTT+TGG - chr3.1:56824767-56824786 MS.gene057354:intron 45.0%
AGAAGGAGCGGTAGAGTTAG+TGG - chr3.1:56825814-56825833 MS.gene057354:intron 50.0%
CCCAGAGATATGGGTCCTTA+TGG - chr3.1:56824884-56824903 MS.gene057354:CDS 50.0%
CGGTAGAGTTAGTGGTTCCA+GGG - chr3.1:56825822-56825841 MS.gene057354:intron 50.0%
CTCCACCCACCAAATTGTTG+TGG + chr3.1:56826067-56826086 None:intergenic 50.0%
GATGCCAAGTGCAGTTGAAC+CGG + chr3.1:56825282-56825301 None:intergenic 50.0%
GCGAGAGATAGTTCCCTTGA+TGG - chr3.1:56825599-56825618 MS.gene057354:intron 50.0%
GGCTCCTCATGATGTTGTGT+AGG + chr3.1:56823929-56823948 None:intergenic 50.0%
GGTTCCAGGGAACTTTCCAA+TGG - chr3.1:56825835-56825854 MS.gene057354:intron 50.0%
TGCACACCCTCCTGTTAGAA+GGG - chr3.1:56823856-56823875 MS.gene057354:CDS 50.0%
! CACCACAACAATTTGGTGGG+TGG - chr3.1:56826062-56826081 MS.gene057354:intron 50.0%
!! TATGCCGGTTCAACTGCACT+TGG - chr3.1:56825275-56825294 MS.gene057354:CDS 50.0%
ATGACCATGAGTGCACGGGT+AGG - chr3.1:56823824-56823843 MS.gene057354:CDS 55.0%
CACCCCATTGGAAAGTTCCC+TGG + chr3.1:56825842-56825861 None:intergenic 55.0%
CGACTGCGAACGTAAGAGTG+GGG - chr3.1:56823883-56823902 MS.gene057354:CDS 55.0%
CTGCACACCCTCCTGTTAGA+AGG - chr3.1:56823855-56823874 MS.gene057354:CDS 55.0%
GAGCAGCCGCAACATCAGAA+GGG - chr3.1:56823956-56823975 MS.gene057354:CDS 55.0%
GCACACCCTCCTGTTAGAAG+GGG - chr3.1:56823857-56823876 MS.gene057354:CDS 55.0%
GCATCGGGACGCATGTCAAA+TGG - chr3.1:56824926-56824945 MS.gene057354:CDS 55.0%
GCCTCACCCTTCTGATGTTG+CGG + chr3.1:56823965-56823984 None:intergenic 55.0%
GCGACTGCGAACGTAAGAGT+GGG - chr3.1:56823882-56823901 MS.gene057354:CDS 55.0%
GCGGTAGAGTTAGTGGTTCC+AGG - chr3.1:56825821-56825840 MS.gene057354:intron 55.0%
TGAGCAGCCGCAACATCAGA+AGG - chr3.1:56823955-56823974 MS.gene057354:CDS 55.0%
TGCGAACGTAAGAGTGGGGA+GGG - chr3.1:56823887-56823906 MS.gene057354:CDS 55.0%
TGTTGCGGCTGCTCATGATG+AGG + chr3.1:56823950-56823969 None:intergenic 55.0%
! ACTGGTCTGGGTGCAAACTC+CGG + chr3.1:56824004-56824023 None:intergenic 55.0%
CAGTCGCGTCCCCTTCTAAC+AGG + chr3.1:56823869-56823888 None:intergenic 60.0%
CGCGACTGCGAACGTAAGAG+TGG - chr3.1:56823881-56823900 MS.gene057354:CDS 60.0%
CGCGTCCCCTTCTAACAGGA+GGG + chr3.1:56823865-56823884 None:intergenic 60.0%
CTGCGAACGTAAGAGTGGGG+AGG - chr3.1:56823886-56823905 MS.gene057354:CDS 60.0%
GCCGCAACATCAGAAGGGTG+AGG - chr3.1:56823961-56823980 MS.gene057354:CDS 60.0%
GCGAACGTAAGAGTGGGGAG+GGG - chr3.1:56823888-56823907 MS.gene057354:CDS 60.0%
TCGCGTCCCCTTCTAACAGG+AGG + chr3.1:56823866-56823885 None:intergenic 60.0%
CCATGAGTGCACGGGTAGGC+AGG - chr3.1:56823828-56823847 MS.gene057354:CDS 65.0%
CCTGCCTACCCGTGCACTCA+TGG + chr3.1:56823831-56823850 None:intergenic 65.0%
GAAGGGTGAGGCTGAGCAGC+AGG - chr3.1:56823973-56823992 MS.gene057354:CDS 65.0%
GAGTGCACGGGTAGGCAGGC+AGG - chr3.1:56823832-56823851 MS.gene057354:CDS 70.0%
GGCTGAGCAGCAGGCGGTAC+CGG - chr3.1:56823982-56824001 MS.gene057354:CDS 70.0%
GGGTGAGGCTGAGCAGCAGG+CGG - chr3.1:56823976-56823995 MS.gene057354:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 56823824 56826418 56823824 ID=MS.gene057354
chr3.1 mRNA 56823824 56826418 56823824 ID=MS.gene057354.t1;Parent=MS.gene057354
chr3.1 exon 56826221 56826418 56826221 ID=MS.gene057354.t1.exon1;Parent=MS.gene057354.t1
chr3.1 CDS 56826221 56826418 56826221 ID=cds.MS.gene057354.t1;Parent=MS.gene057354.t1
chr3.1 exon 56825271 56825496 56825271 ID=MS.gene057354.t1.exon2;Parent=MS.gene057354.t1
chr3.1 CDS 56825271 56825496 56825271 ID=cds.MS.gene057354.t1;Parent=MS.gene057354.t1
chr3.1 exon 56824832 56825053 56824832 ID=MS.gene057354.t1.exon3;Parent=MS.gene057354.t1
chr3.1 CDS 56824832 56825053 56824832 ID=cds.MS.gene057354.t1;Parent=MS.gene057354.t1
chr3.1 exon 56824595 56824737 56824595 ID=MS.gene057354.t1.exon4;Parent=MS.gene057354.t1
chr3.1 CDS 56824595 56824737 56824595 ID=cds.MS.gene057354.t1;Parent=MS.gene057354.t1
chr3.1 exon 56824166 56824439 56824166 ID=MS.gene057354.t1.exon5;Parent=MS.gene057354.t1
chr3.1 CDS 56824166 56824439 56824166 ID=cds.MS.gene057354.t1;Parent=MS.gene057354.t1
chr3.1 exon 56823824 56824062 56823824 ID=MS.gene057354.t1.exon6;Parent=MS.gene057354.t1
chr3.1 CDS 56823824 56824062 56823824 ID=cds.MS.gene057354.t1;Parent=MS.gene057354.t1
Gene Sequence

>MS.gene057354

ATGACCATGAGTGCACGGGTAGGCAGGCAGGCTGCACACCCTCCTGTTAGAAGGGGACGCGACTGCGAACGTAAGAGTGGGGAGGGGACGTCGTCCCAGAACCCTACACAACATCATGAGGAGCCTCATCATGAGCAGCCGCAACATCAGAAGGGTGAGGCTGAGCAGCAGGCGGTACCGGAGTTTGCACCCAGACCAGTTACTTTTTTTGGGCTCCTACTAATCTGTTGCTTCTACTAAATTTTTGTAGACACAAAGCCTGTTATCTTAAGTAATATTTTTTTTAATTTTATTTAAATAATATTTTTTTTACGATTTAACTGTTATCTTAAAATATTTATATGTTAATTTTTAATTATTGTTTTTTTAATAAAACAATAATTAAAACTAAAGTATTATGCTTTGAACTAACAACAAATTAAAACCTAAAAAAAAAAAGTGAAATATCATTGTGGGTGCAAATATGTGGAAATTTATGGAGCTATGAAAACCCTATTGTGTGAGTATAATAGAATAATTAAAACTAGAAATTTTGTTATGATCTCTAGTTTTAGGATATGAATATTGTTATGATTACTATTTTAATTTCTTTTGTGGGTGGAAGATATCTATTTGTTTGAGAGGAGAAGCTATCTAATTTTGTTATAATCTAATTTTAGTATATTATATTGTTTTAGATAATTTAAGTTTACAACAAACAAGCATAATCAATACACATTCATTAATGATTATGCGTTGGGTATTTTAAGTTTACAACTTTACAAAAATAAAAATAGGAAAACAAGTTCCAGCTAAAAAATTAGAGAAATCGTTTCATAACAGGATAAAGGAGTAAGCGTGACAATATATAAAGATTATCAATCTCATTTTCTAGCATACATCAATACCAGTTCTTTGCTATCTTTCTATAAACACCATGAAGATCTTCATTCTCTTCGGTATCACCTTTGCATGTGGGCTTTTTGGAAATTTCATTTCAAATGCTAATCCTCTACCGTATGAAGCCATCTTCAACTTTGGTGATTCTGTAAGTGATACTGGAAATGCTGCATTTGATTACCCCAGAGATATGGGTCCTTATGGTTCAACGTACTTTAAACATGCATCGGGACGCATGTCAAATGGACGACTAATCATAGACTTCATAGGTACCTTTACACATTCTTTTGTTTCTTAAATAAATTATTTTTGTATTCATGAAATGGTAAATAAGAAAATAAAAATAAAAAATAACAACAAAAATTTCCTACCAAGAACTCTAAAATAATCTATTTTATATAGTTGTTATAATTAAAATCAGTAATTTTTAATGTTGATACATTTCTGATTGACAAATTCACTAGCTCATTCTCATGTTAACTGTAGCTGAGGCATATGGTTTGCCATTTTTACCGGCCTATAAAAATGTCACCAAAATCCATGGTGATATAAAAAAGGGAGTTAATTTTGCTTATGCCGGTTCAACTGCACTTGGCATCAAATATTTCAGTGGTAGTGGAGTCCTTACACCAGAGAAAGATAACTCATTAAATGTGCAATTTGATTGGTTTAAGAAGCTAAAACCCTTATTGTGTAACACCAAAGAAGGTTTTGTCCTAACTCCTTGCTTGCTACTTTTGTGTGATATAAATGATTTATCATCTATAATACTAACAAAACTTTTTTCCTTGTGAGTTCACAGAATGTGATAGCTTCATCAAAAAATCATTGTTTATAGTGGGAGAGATTGGTGGAAATGATATTTTTTACCATCTTTCCAAAACTATTTCAGAACTGCGAGAGATAGTTCCCTTGATGGTTGATTCAATCAAAAATACCACCATTGTATGTTATACAAAACTTAAGTAATTAAATGTTTGGGTATTGAAAAAAAAAGTTTACTTCAGTTGTAGAATTATTGTGTTTGAGTTATAGGTATTATCAAATAAATAACAATCTTGGAAAAAAGTAATAGATATTTATTTAATTATGTTTATCAGGCTTTAATTGAAGAAGGAGCGGTAGAGTTAGTGGTTCCAGGGAACTTTCCAATGGGGTGTAATACTGACATATTGTCAAAAAAGATTAGTCAGAAGAAAGAAGACTATGATGAATTTGGATGTTTGATAGCTTACAACACTCTCATCGAATACTTTAATGAGCAGCTAAAAAAATCCATAGAGACAATAAAACAGAAATACCCACAAGCTAAGATAGTATATTTTGACTATTACAACGATGCTAAACGTTTATATCAAGCACCACAACAATTTGGTGGGTGGAGCAATTATTTTCTTTCCATGTTAAGTTTTCATTGATTTTTACTTTTCAAATTTATTTGATCCCATGCATTAATTTATGTTCATTAATGATGCAGGTTTTATTTCTGATAAAGTCGAGATTTTGAAAGCATGTTGTGGAGGAAGTGGACCATATCATCATGATCAGTATTTTTGTGGAACGTCGAATACAACAATTTGCTCTGATCCTTCAAAACTAATAAATTGGGATGGTCAACACTTTACCGAAGCCGCTTATAAGCAAATAGCTAAAGGTTTAATTGAAGGCCCTTTTGCATATCCTTCTCTAAAACCTGCTCCTTTCAAGATAGTTTAG
Protein sequence

>MS.gene057354.t1

MTMSARVGRQAAHPPVRRGRDCERKSGEGTSSQNPTQHHEEPHHEQPQHQKGEAEQQAVPEFAPRPIFILFGITFACGLFGNFISNANPLPYEAIFNFGDSVSDTGNAAFDYPRDMGPYGSTYFKHASGRMSNGRLIIDFIAEAYGLPFLPAYKNVTKIHGDIKKGVNFAYAGSTALGIKYFSGSGVLTPEKDNSLNVQFDWFKKLKPLLCNTKEECDSFIKKSLFIVGEIGGNDIFYHLSKTISELREIVPLMVDSIKNTTIALIEEGAVELVVPGNFPMGCNTDILSKKISQKKEDYDEFGCLIAYNTLIEYFNEQLKKSIETIKQKYPQAKIVYFDYYNDAKRLYQAPQQFGFISDKVEILKACCGGSGPYHHDQYFCGTSNTTICSDPSKLINWDGQHFTEAAYKQIAKGLIEGPFAYPSLKPAPFKIV