Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057363.t1 | XP_003600821.2 | 95.7 | 371 | 16 | 0 | 1 | 371 | 1 | 371 | 2.90E-211 | 744.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057363.t1 | Q9FJ45 | 44.0 | 373 | 195 | 8 | 1 | 362 | 1 | 370 | 3.1e-84 | 313.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057363.t1 | G7JAK8 | 95.7 | 371 | 16 | 0 | 1 | 371 | 1 | 371 | 2.1e-211 | 744.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene057363 | MS.gene002554 | PPI |
MS.gene057363 | MS.gene004228 | PPI |
MS.gene01536 | MS.gene057363 | PPI |
MS.gene057363 | MS.gene54327 | PPI |
MS.gene057363 | MS.gene54325 | PPI |
MS.gene057363 | MS.gene002555 | PPI |
MS.gene057363 | MS.gene01535 | PPI |
MS.gene01537 | MS.gene057363 | PPI |
MS.gene057363 | MS.gene004229 | PPI |
MS.gene057363 | MS.gene004227 | PPI |
MS.gene057363 | MS.gene002553 | PPI |
MS.gene057363 | MS.gene54326 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057363.t1 | MTR_3g069780 | 95.687 | 371 | 16 | 0 | 1 | 371 | 1 | 371 | 0.0 | 733 |
MS.gene057363.t1 | MTR_3g438030 | 94.609 | 371 | 20 | 0 | 1 | 371 | 1 | 371 | 0.0 | 726 |
MS.gene057363.t1 | MTR_3g069520 | 84.718 | 373 | 51 | 3 | 1 | 371 | 1 | 369 | 0.0 | 636 |
MS.gene057363.t1 | MTR_3g448360 | 80.697 | 373 | 68 | 3 | 1 | 371 | 1 | 371 | 0.0 | 613 |
MS.gene057363.t1 | MTR_2g079090 | 67.914 | 374 | 102 | 7 | 1 | 371 | 1 | 359 | 2.94e-178 | 499 |
MS.gene057363.t1 | MTR_0029s0050 | 67.914 | 374 | 102 | 7 | 1 | 371 | 1 | 359 | 9.44e-177 | 495 |
MS.gene057363.t1 | MTR_3g463960 | 63.918 | 388 | 122 | 5 | 1 | 371 | 2 | 388 | 3.13e-176 | 495 |
MS.gene057363.t1 | MTR_3g463950 | 63.918 | 388 | 122 | 5 | 1 | 371 | 2 | 388 | 3.13e-176 | 495 |
MS.gene057363.t1 | MTR_3g463970 | 63.918 | 388 | 122 | 5 | 1 | 371 | 2 | 388 | 3.13e-176 | 495 |
MS.gene057363.t1 | MTR_3g463940 | 63.918 | 388 | 122 | 5 | 1 | 371 | 2 | 388 | 3.13e-176 | 495 |
MS.gene057363.t1 | MTR_2g079080 | 67.112 | 374 | 105 | 7 | 1 | 371 | 1 | 359 | 8.71e-176 | 493 |
MS.gene057363.t1 | MTR_0029s0100 | 67.380 | 374 | 104 | 7 | 1 | 371 | 1 | 359 | 1.93e-174 | 489 |
MS.gene057363.t1 | MTR_3g463930 | 61.616 | 396 | 125 | 7 | 1 | 371 | 2 | 395 | 2.76e-167 | 473 |
MS.gene057363.t1 | MTR_2g043980 | 58.400 | 375 | 132 | 7 | 1 | 371 | 7 | 361 | 2.02e-150 | 429 |
MS.gene057363.t1 | MTR_2g015650 | 51.613 | 372 | 172 | 5 | 5 | 371 | 6 | 374 | 1.39e-127 | 371 |
MS.gene057363.t1 | MTR_2g015670 | 49.307 | 361 | 163 | 7 | 15 | 371 | 16 | 360 | 5.78e-114 | 336 |
MS.gene057363.t1 | MTR_2g015630 | 45.930 | 344 | 170 | 7 | 35 | 368 | 36 | 373 | 2.56e-100 | 302 |
MS.gene057363.t1 | MTR_2g015580 | 44.477 | 344 | 179 | 4 | 28 | 364 | 45 | 383 | 5.59e-99 | 299 |
MS.gene057363.t1 | MTR_2g043990 | 51.351 | 296 | 113 | 6 | 1 | 292 | 69 | 337 | 1.93e-94 | 285 |
MS.gene057363.t1 | MTR_2g015590 | 43.109 | 341 | 183 | 6 | 28 | 361 | 29 | 365 | 1.63e-90 | 277 |
MS.gene057363.t1 | MTR_3g466240 | 57.604 | 217 | 59 | 3 | 104 | 315 | 2 | 190 | 3.27e-76 | 234 |
MS.gene057363.t1 | MTR_4g104240 | 38.329 | 347 | 187 | 12 | 27 | 361 | 36 | 367 | 3.22e-72 | 230 |
MS.gene057363.t1 | MTR_2g015590 | 43.382 | 272 | 147 | 4 | 28 | 293 | 29 | 299 | 1.95e-66 | 214 |
MS.gene057363.t1 | MTR_3g466190 | 66.867 | 166 | 36 | 3 | 58 | 223 | 7 | 153 | 2.15e-65 | 207 |
MS.gene057363.t1 | MTR_3g466190 | 79.487 | 78 | 16 | 0 | 294 | 371 | 152 | 229 | 1.73e-37 | 135 |
MS.gene057363.t1 | MTR_7g087190 | 32.718 | 379 | 211 | 14 | 18 | 371 | 31 | 390 | 1.37e-52 | 179 |
MS.gene057363.t1 | MTR_8g028160 | 33.687 | 377 | 216 | 15 | 6 | 361 | 11 | 374 | 1.75e-51 | 176 |
MS.gene057363.t1 | MTR_7g116870 | 33.889 | 360 | 202 | 13 | 28 | 369 | 31 | 372 | 4.10e-49 | 170 |
MS.gene057363.t1 | MTR_1g030340 | 33.418 | 392 | 214 | 15 | 4 | 371 | 18 | 386 | 2.17e-47 | 166 |
MS.gene057363.t1 | MTR_7g111780 | 33.430 | 344 | 198 | 13 | 30 | 363 | 36 | 358 | 2.73e-47 | 164 |
MS.gene057363.t1 | MTR_1g030220 | 33.333 | 357 | 203 | 11 | 28 | 364 | 38 | 379 | 4.97e-47 | 164 |
MS.gene057363.t1 | MTR_1g030268 | 33.613 | 357 | 200 | 12 | 28 | 364 | 38 | 377 | 1.37e-46 | 163 |
MS.gene057363.t1 | MTR_8g089805 | 32.312 | 359 | 205 | 12 | 28 | 363 | 38 | 381 | 1.42e-46 | 163 |
MS.gene057363.t1 | MTR_7g113860 | 33.333 | 360 | 198 | 14 | 26 | 361 | 25 | 366 | 1.80e-46 | 163 |
MS.gene057363.t1 | MTR_7g113860 | 30.729 | 384 | 222 | 15 | 2 | 361 | 9 | 372 | 8.10e-46 | 161 |
MS.gene057363.t1 | MTR_1g030230 | 33.967 | 368 | 200 | 14 | 20 | 363 | 22 | 370 | 1.98e-44 | 157 |
MS.gene057363.t1 | MTR_7g033165 | 32.133 | 361 | 199 | 12 | 28 | 362 | 31 | 371 | 2.41e-43 | 154 |
MS.gene057363.t1 | MTR_7g033155 | 32.642 | 386 | 193 | 15 | 22 | 363 | 30 | 392 | 7.02e-43 | 154 |
MS.gene057363.t1 | MTR_7g033150 | 32.011 | 378 | 205 | 14 | 20 | 366 | 25 | 381 | 2.46e-42 | 152 |
MS.gene057363.t1 | MTR_6g007090 | 32.410 | 361 | 206 | 11 | 20 | 361 | 29 | 370 | 4.15e-42 | 151 |
MS.gene057363.t1 | MTR_1g030275 | 34.072 | 361 | 191 | 16 | 28 | 363 | 37 | 375 | 3.72e-41 | 149 |
MS.gene057363.t1 | MTR_1g082390 | 31.653 | 357 | 205 | 15 | 20 | 354 | 21 | 360 | 6.84e-40 | 145 |
MS.gene057363.t1 | MTR_6g007095 | 31.392 | 395 | 217 | 14 | 1 | 367 | 7 | 375 | 1.05e-38 | 147 |
MS.gene057363.t1 | MTR_6g007095 | 28.882 | 322 | 189 | 10 | 57 | 363 | 394 | 690 | 5.06e-29 | 119 |
MS.gene057363.t1 | MTR_8g038680 | 29.944 | 354 | 213 | 13 | 28 | 361 | 26 | 364 | 1.24e-37 | 139 |
MS.gene057363.t1 | MTR_8g022810 | 31.686 | 344 | 182 | 17 | 29 | 350 | 40 | 352 | 3.05e-34 | 130 |
MS.gene057363.t1 | MTR_1g030268 | 33.333 | 279 | 160 | 10 | 28 | 293 | 38 | 303 | 3.17e-34 | 129 |
MS.gene057363.t1 | MTR_7g111780 | 33.457 | 269 | 151 | 11 | 105 | 363 | 9 | 259 | 9.47e-34 | 126 |
MS.gene057363.t1 | MTR_4g056160 | 29.042 | 334 | 212 | 9 | 30 | 354 | 27 | 344 | 1.95e-32 | 125 |
MS.gene057363.t1 | MTR_4g056280 | 29.360 | 344 | 216 | 10 | 19 | 354 | 20 | 344 | 1.98e-31 | 122 |
MS.gene057363.t1 | MTR_8g031390 | 28.529 | 340 | 212 | 14 | 25 | 356 | 32 | 348 | 3.03e-31 | 122 |
MS.gene057363.t1 | MTR_6g007100 | 31.285 | 358 | 196 | 16 | 28 | 367 | 31 | 356 | 4.28e-31 | 121 |
MS.gene057363.t1 | MTR_2g033930 | 30.655 | 336 | 204 | 12 | 30 | 356 | 32 | 347 | 1.11e-30 | 120 |
MS.gene057363.t1 | MTR_1g030265 | 31.310 | 313 | 176 | 13 | 81 | 371 | 53 | 348 | 1.22e-30 | 120 |
MS.gene057363.t1 | MTR_8g031420 | 27.368 | 380 | 234 | 14 | 2 | 363 | 5 | 360 | 6.25e-30 | 118 |
MS.gene057363.t1 | MTR_3g052490 | 30.214 | 374 | 218 | 15 | 3 | 362 | 12 | 356 | 1.04e-29 | 117 |
MS.gene057363.t1 | MTR_1g025680 | 30.267 | 337 | 203 | 13 | 30 | 355 | 34 | 349 | 1.32e-29 | 119 |
MS.gene057363.t1 | MTR_1g025720 | 29.641 | 334 | 196 | 12 | 28 | 347 | 35 | 343 | 1.34e-29 | 117 |
MS.gene057363.t1 | MTR_8g031430 | 28.191 | 376 | 227 | 16 | 4 | 363 | 14 | 362 | 1.58e-29 | 117 |
MS.gene057363.t1 | MTR_7g033165 | 32.090 | 268 | 154 | 7 | 28 | 279 | 31 | 286 | 1.72e-29 | 116 |
MS.gene057363.t1 | MTR_4g122200 | 29.282 | 362 | 219 | 13 | 20 | 369 | 27 | 363 | 2.54e-29 | 116 |
MS.gene057363.t1 | MTR_1g025780 | 29.290 | 338 | 203 | 13 | 30 | 355 | 41 | 354 | 1.22e-28 | 114 |
MS.gene057363.t1 | MTR_1g025700 | 30.205 | 341 | 197 | 13 | 30 | 355 | 50 | 364 | 4.08e-28 | 113 |
MS.gene057363.t1 | MTR_7g113860 | 29.276 | 304 | 181 | 12 | 79 | 361 | 8 | 298 | 4.58e-28 | 112 |
MS.gene057363.t1 | MTR_8g089805 | 28.428 | 299 | 183 | 10 | 86 | 363 | 25 | 313 | 8.77e-28 | 111 |
MS.gene057363.t1 | MTR_8g014910 | 28.022 | 364 | 223 | 14 | 3 | 354 | 11 | 347 | 8.89e-28 | 112 |
MS.gene057363.t1 | MTR_2g015080 | 29.129 | 333 | 201 | 14 | 34 | 349 | 42 | 356 | 5.35e-27 | 110 |
MS.gene057363.t1 | MTR_5g009100 | 28.614 | 339 | 210 | 13 | 32 | 359 | 48 | 365 | 8.26e-27 | 110 |
MS.gene057363.t1 | MTR_5g078210 | 27.164 | 335 | 212 | 10 | 34 | 358 | 29 | 341 | 1.41e-26 | 108 |
MS.gene057363.t1 | MTR_8g031390 | 29.000 | 300 | 186 | 13 | 25 | 320 | 32 | 308 | 1.76e-26 | 108 |
MS.gene057363.t1 | MTR_3g098270 | 28.488 | 344 | 211 | 11 | 28 | 357 | 32 | 354 | 2.39e-26 | 108 |
MS.gene057363.t1 | MTR_3g005650 | 27.457 | 346 | 210 | 14 | 30 | 361 | 30 | 348 | 3.29e-26 | 108 |
MS.gene057363.t1 | MTR_8g031400 | 28.324 | 346 | 206 | 14 | 25 | 356 | 32 | 349 | 7.03e-26 | 107 |
MS.gene057363.t1 | MTR_2g100620 | 26.946 | 334 | 217 | 11 | 30 | 354 | 31 | 346 | 1.04e-25 | 106 |
MS.gene057363.t1 | MTR_8g079050 | 29.199 | 387 | 216 | 19 | 3 | 362 | 11 | 366 | 1.82e-25 | 106 |
MS.gene057363.t1 | MTR_5g022630 | 28.406 | 345 | 217 | 11 | 16 | 349 | 29 | 354 | 2.03e-25 | 105 |
MS.gene057363.t1 | MTR_3g052580 | 28.902 | 346 | 211 | 13 | 30 | 362 | 28 | 351 | 2.18e-25 | 106 |
MS.gene057363.t1 | MTR_3g052580 | 29.223 | 373 | 221 | 17 | 3 | 362 | 8 | 350 | 2.39e-25 | 106 |
MS.gene057363.t1 | MTR_8g012540 | 30.091 | 329 | 191 | 14 | 28 | 334 | 26 | 337 | 2.59e-25 | 105 |
MS.gene057363.t1 | MTR_1g025760 | 28.994 | 338 | 206 | 12 | 30 | 355 | 80 | 395 | 3.15e-25 | 105 |
MS.gene057363.t1 | MTR_3g052480 | 29.480 | 346 | 207 | 14 | 30 | 360 | 33 | 356 | 5.05e-25 | 104 |
MS.gene057363.t1 | MTR_4g087985 | 27.507 | 349 | 215 | 13 | 29 | 356 | 35 | 366 | 5.94e-25 | 104 |
MS.gene057363.t1 | MTR_3g082830 | 27.596 | 337 | 220 | 11 | 30 | 359 | 38 | 357 | 9.29e-25 | 103 |
MS.gene057363.t1 | MTR_5g084750 | 28.242 | 347 | 205 | 13 | 30 | 359 | 30 | 349 | 1.28e-24 | 103 |
MS.gene057363.t1 | MTR_3g464730 | 28.415 | 366 | 228 | 16 | 1 | 355 | 2 | 344 | 1.34e-24 | 103 |
MS.gene057363.t1 | MTR_2g033920 | 29.032 | 341 | 207 | 12 | 29 | 356 | 34 | 352 | 2.20e-24 | 103 |
MS.gene057363.t1 | MTR_5g084770 | 29.310 | 348 | 207 | 14 | 21 | 354 | 21 | 343 | 3.57e-24 | 102 |
MS.gene057363.t1 | MTR_2g044100 | 27.920 | 351 | 217 | 16 | 23 | 359 | 36 | 364 | 4.75e-24 | 102 |
MS.gene057363.t1 | MTR_5g022640 | 27.171 | 357 | 228 | 11 | 9 | 355 | 25 | 359 | 1.04e-23 | 101 |
MS.gene057363.t1 | MTR_4g035353 | 24.438 | 356 | 237 | 10 | 18 | 361 | 19 | 354 | 1.22e-23 | 100 |
MS.gene057363.t1 | MTR_5g083040 | 26.513 | 347 | 219 | 14 | 30 | 360 | 32 | 358 | 1.80e-23 | 100 |
MS.gene057363.t1 | MTR_5g074270 | 28.070 | 342 | 202 | 14 | 28 | 351 | 31 | 346 | 1.81e-23 | 100 |
MS.gene057363.t1 | MTR_3g114090 | 29.070 | 344 | 206 | 15 | 26 | 355 | 32 | 351 | 1.99e-23 | 100 |
MS.gene057363.t1 | MTR_5g078210 | 27.660 | 329 | 188 | 11 | 34 | 351 | 29 | 318 | 9.99e-23 | 97.8 |
MS.gene057363.t1 | MTR_5g084790 | 27.893 | 337 | 219 | 11 | 30 | 359 | 32 | 351 | 2.45e-22 | 97.1 |
MS.gene057363.t1 | MTR_3g435540 | 27.596 | 366 | 206 | 14 | 32 | 367 | 25 | 361 | 4.39e-22 | 96.7 |
MS.gene057363.t1 | MTR_7g116510 | 28.863 | 343 | 213 | 16 | 29 | 360 | 24 | 346 | 1.06e-21 | 95.5 |
MS.gene057363.t1 | MTR_1g025910 | 28.701 | 331 | 204 | 14 | 35 | 355 | 41 | 349 | 1.27e-21 | 95.5 |
MS.gene057363.t1 | MTR_7g116520 | 26.648 | 349 | 216 | 15 | 29 | 361 | 33 | 357 | 2.85e-21 | 94.4 |
MS.gene057363.t1 | MTR_8g087890 | 26.667 | 330 | 211 | 12 | 32 | 351 | 33 | 341 | 5.67e-21 | 93.2 |
MS.gene057363.t1 | MTR_1g024890 | 26.705 | 352 | 224 | 14 | 23 | 361 | 25 | 355 | 8.63e-21 | 92.8 |
MS.gene057363.t1 | MTR_0009s0250 | 26.148 | 283 | 181 | 8 | 30 | 306 | 33 | 293 | 1.66e-20 | 91.7 |
MS.gene057363.t1 | MTR_8g075200 | 26.720 | 378 | 231 | 15 | 1 | 355 | 2 | 356 | 2.80e-20 | 92.0 |
MS.gene057363.t1 | MTR_1g060490 | 25.970 | 335 | 202 | 12 | 27 | 349 | 34 | 334 | 1.39e-19 | 89.4 |
MS.gene057363.t1 | MTR_4g108690 | 26.706 | 337 | 211 | 12 | 32 | 355 | 29 | 342 | 1.79e-19 | 89.0 |
MS.gene057363.t1 | MTR_8g022790 | 25.146 | 342 | 218 | 10 | 25 | 356 | 32 | 345 | 2.19e-19 | 88.6 |
MS.gene057363.t1 | MTR_0565s0010 | 24.024 | 333 | 217 | 14 | 32 | 351 | 34 | 343 | 3.10e-19 | 88.2 |
MS.gene057363.t1 | MTR_3g005660 | 25.758 | 330 | 218 | 12 | 32 | 351 | 38 | 350 | 9.07e-19 | 87.0 |
MS.gene057363.t1 | MTR_8g075220 | 25.066 | 379 | 241 | 13 | 1 | 355 | 1 | 360 | 1.02e-18 | 87.0 |
MS.gene057363.t1 | MTR_3g114120 | 25.904 | 332 | 213 | 14 | 30 | 350 | 47 | 356 | 1.29e-18 | 86.7 |
MS.gene057363.t1 | MTR_2g084585 | 25.588 | 340 | 213 | 12 | 30 | 354 | 30 | 344 | 1.62e-18 | 86.3 |
MS.gene057363.t1 | MTR_1g079540 | 26.453 | 344 | 223 | 12 | 27 | 360 | 28 | 351 | 2.00e-18 | 85.9 |
MS.gene057363.t1 | MTR_5g093090 | 25.926 | 378 | 228 | 14 | 6 | 362 | 6 | 352 | 2.85e-18 | 85.5 |
MS.gene057363.t1 | MTR_7g104220 | 25.970 | 335 | 203 | 13 | 31 | 353 | 43 | 344 | 3.30e-18 | 85.1 |
MS.gene057363.t1 | MTR_1g060500 | 25.862 | 348 | 202 | 16 | 27 | 353 | 37 | 349 | 3.63e-18 | 85.1 |
MS.gene057363.t1 | MTR_1g069175 | 26.393 | 341 | 217 | 14 | 29 | 356 | 32 | 351 | 5.09e-18 | 84.7 |
MS.gene057363.t1 | MTR_8g022810 | 33.014 | 209 | 107 | 10 | 29 | 221 | 40 | 231 | 5.32e-18 | 84.3 |
MS.gene057363.t1 | MTR_7g116500 | 24.857 | 350 | 217 | 15 | 29 | 360 | 32 | 353 | 2.77e-17 | 82.8 |
MS.gene057363.t1 | MTR_6g021530 | 25.562 | 356 | 231 | 14 | 17 | 360 | 17 | 350 | 3.83e-17 | 82.4 |
MS.gene057363.t1 | MTR_7g116570 | 23.295 | 352 | 220 | 14 | 29 | 360 | 33 | 354 | 4.95e-17 | 82.0 |
MS.gene057363.t1 | MTR_2g033920 | 27.338 | 278 | 173 | 9 | 29 | 293 | 34 | 295 | 1.46e-16 | 80.1 |
MS.gene057363.t1 | MTR_4g019880 | 26.203 | 374 | 230 | 17 | 2 | 360 | 12 | 354 | 1.61e-16 | 80.5 |
MS.gene057363.t1 | MTR_2g461580 | 22.832 | 346 | 213 | 10 | 30 | 359 | 31 | 338 | 5.40e-16 | 78.6 |
MS.gene057363.t1 | MTR_3g023220 | 24.923 | 325 | 201 | 11 | 31 | 345 | 34 | 325 | 7.69e-16 | 78.2 |
MS.gene057363.t1 | MTR_1g092750 | 23.780 | 328 | 211 | 11 | 31 | 349 | 41 | 338 | 1.48e-15 | 77.4 |
MS.gene057363.t1 | MTR_1g079530 | 27.446 | 368 | 214 | 21 | 3 | 356 | 11 | 339 | 4.13e-15 | 76.3 |
MS.gene057363.t1 | MTR_3g021460 | 23.392 | 342 | 210 | 12 | 30 | 356 | 31 | 335 | 9.08e-15 | 75.1 |
MS.gene057363.t1 | MTR_3g024510 | 23.565 | 331 | 220 | 13 | 32 | 351 | 40 | 348 | 1.40e-13 | 71.6 |
MS.gene057363.t1 | MTR_1g092740 | 23.547 | 344 | 203 | 13 | 31 | 353 | 39 | 343 | 2.14e-13 | 70.9 |
MS.gene057363.t1 | MTR_8g074570 | 24.929 | 353 | 203 | 14 | 31 | 356 | 39 | 356 | 3.92e-13 | 70.5 |
MS.gene057363.t1 | MTR_5g093090 | 25.163 | 306 | 194 | 10 | 6 | 295 | 6 | 292 | 4.48e-12 | 66.6 |
MS.gene057363.t1 | MTR_2g017875 | 26.586 | 331 | 192 | 16 | 31 | 344 | 35 | 331 | 7.98e-12 | 66.2 |
MS.gene057363.t1 | MTR_8g074560 | 25.000 | 360 | 225 | 16 | 30 | 370 | 31 | 364 | 8.98e-12 | 66.2 |
MS.gene057363.t1 | MTR_8g087870 | 25.723 | 346 | 209 | 16 | 31 | 361 | 30 | 342 | 1.36e-11 | 65.5 |
MS.gene057363.t1 | MTR_6g049220 | 39.423 | 104 | 56 | 5 | 19 | 118 | 20 | 120 | 5.45e-11 | 61.2 |
MS.gene057363.t1 | MTR_2g017965 | 25.143 | 350 | 212 | 18 | 31 | 361 | 34 | 352 | 5.64e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057363.t1 | AT5G45910 | 43.799 | 379 | 187 | 10 | 1 | 362 | 1 | 370 | 7.51e-103 | 308 |
MS.gene057363.t1 | AT1G28610 | 42.566 | 343 | 181 | 9 | 29 | 362 | 30 | 365 | 1.53e-87 | 270 |
MS.gene057363.t1 | AT1G31550 | 40.650 | 369 | 202 | 11 | 3 | 361 | 8 | 369 | 6.83e-87 | 268 |
MS.gene057363.t1 | AT1G28570 | 41.983 | 343 | 184 | 9 | 28 | 361 | 32 | 368 | 2.79e-83 | 259 |
MS.gene057363.t1 | AT1G31550 | 40.108 | 369 | 201 | 12 | 3 | 361 | 8 | 366 | 3.64e-83 | 258 |
MS.gene057363.t1 | AT1G28640 | 39.769 | 347 | 190 | 9 | 28 | 363 | 33 | 371 | 1.25e-82 | 257 |
MS.gene057363.t1 | AT1G28580 | 40.233 | 343 | 190 | 9 | 28 | 361 | 35 | 371 | 4.75e-82 | 256 |
MS.gene057363.t1 | AT1G28670 | 40.230 | 348 | 188 | 10 | 28 | 363 | 33 | 372 | 6.27e-82 | 255 |
MS.gene057363.t1 | AT1G28660 | 41.092 | 348 | 184 | 11 | 28 | 363 | 33 | 371 | 1.34e-81 | 254 |
MS.gene057363.t1 | AT1G28600 | 39.444 | 360 | 195 | 9 | 15 | 361 | 15 | 364 | 4.20e-81 | 253 |
MS.gene057363.t1 | AT1G28660 | 41.092 | 348 | 183 | 12 | 28 | 363 | 33 | 370 | 1.11e-80 | 252 |
MS.gene057363.t1 | AT1G28590 | 39.595 | 346 | 194 | 9 | 28 | 364 | 34 | 373 | 1.54e-80 | 252 |
MS.gene057363.t1 | AT2G27360 | 40.698 | 344 | 188 | 9 | 28 | 361 | 31 | 368 | 2.91e-80 | 251 |
MS.gene057363.t1 | AT1G28650 | 39.481 | 347 | 191 | 9 | 28 | 363 | 35 | 373 | 6.54e-79 | 247 |
MS.gene057363.t1 | AT3G48460 | 37.429 | 350 | 188 | 11 | 27 | 361 | 35 | 368 | 1.74e-65 | 213 |
MS.gene057363.t1 | AT1G28580 | 38.014 | 292 | 169 | 7 | 76 | 361 | 5 | 290 | 1.85e-63 | 205 |
MS.gene057363.t1 | AT1G28570 | 40.566 | 212 | 119 | 4 | 154 | 361 | 88 | 296 | 3.73e-49 | 168 |
MS.gene057363.t1 | AT1G28570 | 40.865 | 208 | 116 | 4 | 158 | 361 | 1 | 205 | 1.01e-48 | 164 |
MS.gene057363.t1 | AT4G01130 | 32.584 | 356 | 203 | 12 | 28 | 361 | 32 | 372 | 1.04e-48 | 169 |
MS.gene057363.t1 | AT1G54790 | 32.873 | 362 | 197 | 14 | 26 | 361 | 28 | 369 | 7.30e-48 | 167 |
MS.gene057363.t1 | AT5G03980 | 33.721 | 344 | 176 | 9 | 15 | 353 | 14 | 310 | 8.34e-48 | 165 |
MS.gene057363.t1 | AT1G56670 | 32.113 | 355 | 198 | 14 | 30 | 368 | 40 | 367 | 1.01e-45 | 160 |
MS.gene057363.t1 | AT5G14450 | 31.593 | 364 | 212 | 12 | 28 | 371 | 39 | 385 | 1.33e-45 | 161 |
MS.gene057363.t1 | AT1G67830 | 32.133 | 361 | 201 | 14 | 21 | 353 | 21 | 365 | 1.00e-44 | 158 |
MS.gene057363.t1 | AT3G62280 | 31.534 | 352 | 211 | 11 | 18 | 361 | 28 | 357 | 2.42e-44 | 157 |
MS.gene057363.t1 | AT1G54790 | 31.250 | 368 | 207 | 14 | 20 | 361 | 21 | 368 | 1.72e-43 | 155 |
MS.gene057363.t1 | AT3G05180 | 32.591 | 359 | 194 | 16 | 28 | 359 | 34 | 371 | 3.48e-43 | 154 |
MS.gene057363.t1 | AT1G09390 | 31.445 | 353 | 203 | 13 | 30 | 368 | 37 | 364 | 1.01e-42 | 153 |
MS.gene057363.t1 | AT1G54790 | 29.744 | 390 | 210 | 15 | 20 | 361 | 21 | 394 | 2.14e-40 | 147 |
MS.gene057363.t1 | AT3G26430 | 31.335 | 367 | 211 | 13 | 28 | 371 | 29 | 377 | 2.64e-40 | 146 |
MS.gene057363.t1 | AT4G01130 | 32.734 | 278 | 164 | 8 | 28 | 293 | 32 | 298 | 9.93e-35 | 130 |
MS.gene057363.t1 | AT1G28600 | 39.604 | 202 | 102 | 8 | 15 | 204 | 15 | 208 | 1.34e-34 | 127 |
MS.gene057363.t1 | AT1G28610 | 41.111 | 180 | 89 | 7 | 29 | 198 | 30 | 202 | 4.87e-33 | 124 |
MS.gene057363.t1 | AT1G71120 | 29.412 | 340 | 199 | 12 | 30 | 356 | 31 | 342 | 3.00e-32 | 124 |
MS.gene057363.t1 | AT3G27950 | 28.877 | 374 | 227 | 12 | 9 | 363 | 11 | 364 | 2.95e-30 | 119 |
MS.gene057363.t1 | AT1G56670 | 30.935 | 278 | 158 | 10 | 30 | 293 | 40 | 297 | 8.11e-30 | 116 |
MS.gene057363.t1 | AT4G10950 | 28.152 | 341 | 216 | 12 | 26 | 356 | 66 | 387 | 1.17e-29 | 118 |
MS.gene057363.t1 | AT5G45950 | 30.030 | 333 | 201 | 12 | 30 | 354 | 40 | 348 | 1.24e-29 | 117 |
MS.gene057363.t1 | AT2G40250 | 27.697 | 343 | 217 | 12 | 21 | 350 | 26 | 350 | 1.46e-29 | 117 |
MS.gene057363.t1 | AT1G75920 | 28.962 | 366 | 214 | 12 | 1 | 355 | 6 | 336 | 9.82e-29 | 114 |
MS.gene057363.t1 | AT1G06990 | 27.557 | 352 | 220 | 10 | 20 | 358 | 27 | 356 | 1.75e-28 | 114 |
MS.gene057363.t1 | AT1G23500 | 26.184 | 359 | 230 | 12 | 5 | 356 | 9 | 339 | 2.73e-28 | 113 |
MS.gene057363.t1 | AT1G53920 | 29.330 | 358 | 209 | 17 | 30 | 370 | 48 | 378 | 1.01e-27 | 112 |
MS.gene057363.t1 | AT1G73610 | 27.545 | 334 | 205 | 12 | 29 | 355 | 34 | 337 | 1.23e-27 | 111 |
MS.gene057363.t1 | AT4G10950 | 27.859 | 341 | 213 | 13 | 26 | 356 | 66 | 383 | 5.90e-27 | 110 |
MS.gene057363.t1 | AT1G20120 | 27.666 | 347 | 212 | 12 | 28 | 358 | 76 | 399 | 6.75e-27 | 110 |
MS.gene057363.t1 | AT4G01130 | 28.188 | 298 | 180 | 11 | 86 | 361 | 1 | 286 | 7.14e-27 | 108 |
MS.gene057363.t1 | AT1G75880 | 28.443 | 334 | 214 | 13 | 30 | 355 | 52 | 368 | 9.04e-27 | 110 |
MS.gene057363.t1 | AT2G23540 | 29.211 | 380 | 219 | 15 | 1 | 356 | 18 | 371 | 1.52e-26 | 109 |
MS.gene057363.t1 | AT3G62280 | 29.749 | 279 | 172 | 8 | 21 | 293 | 31 | 291 | 2.53e-26 | 107 |
MS.gene057363.t1 | AT5G40990 | 29.459 | 370 | 223 | 16 | 4 | 357 | 11 | 358 | 3.34e-26 | 108 |
MS.gene057363.t1 | AT1G75890 | 29.254 | 335 | 210 | 15 | 30 | 355 | 47 | 363 | 5.38e-26 | 107 |
MS.gene057363.t1 | AT3G14225 | 29.107 | 347 | 206 | 15 | 30 | 357 | 37 | 362 | 5.39e-26 | 107 |
MS.gene057363.t1 | AT5G63170 | 28.221 | 326 | 194 | 12 | 30 | 346 | 28 | 322 | 7.60e-26 | 106 |
MS.gene057363.t1 | AT1G75890 | 29.254 | 335 | 210 | 15 | 30 | 355 | 76 | 392 | 1.27e-25 | 107 |
MS.gene057363.t1 | AT1G71250 | 26.100 | 341 | 226 | 10 | 30 | 361 | 41 | 364 | 1.77e-25 | 106 |
MS.gene057363.t1 | AT5G15720 | 26.586 | 331 | 215 | 11 | 30 | 350 | 30 | 342 | 2.49e-25 | 105 |
MS.gene057363.t1 | AT2G42990 | 28.485 | 330 | 208 | 13 | 30 | 350 | 28 | 338 | 3.46e-25 | 105 |
MS.gene057363.t1 | AT3G14225 | 28.696 | 345 | 206 | 15 | 30 | 357 | 37 | 358 | 4.33e-25 | 105 |
MS.gene057363.t1 | AT1G75880 | 29.674 | 337 | 205 | 15 | 30 | 355 | 52 | 367 | 4.79e-25 | 105 |
MS.gene057363.t1 | AT1G75930 | 29.915 | 351 | 186 | 16 | 28 | 353 | 27 | 342 | 4.98e-25 | 104 |
MS.gene057363.t1 | AT1G75920 | 28.084 | 381 | 213 | 13 | 1 | 355 | 1 | 346 | 5.21e-25 | 104 |
MS.gene057363.t1 | AT1G53940 | 31.105 | 344 | 201 | 15 | 29 | 357 | 38 | 360 | 5.32e-25 | 105 |
MS.gene057363.t1 | AT2G03980 | 29.573 | 328 | 199 | 13 | 28 | 345 | 41 | 346 | 5.33e-25 | 104 |
MS.gene057363.t1 | AT2G03980 | 29.573 | 328 | 199 | 13 | 28 | 345 | 41 | 346 | 5.33e-25 | 104 |
MS.gene057363.t1 | AT2G03980 | 29.573 | 328 | 199 | 13 | 28 | 345 | 41 | 346 | 5.33e-25 | 104 |
MS.gene057363.t1 | AT2G03980 | 29.573 | 328 | 199 | 13 | 28 | 345 | 41 | 346 | 5.33e-25 | 104 |
MS.gene057363.t1 | AT1G20135 | 26.205 | 332 | 203 | 12 | 28 | 349 | 27 | 326 | 1.05e-24 | 103 |
MS.gene057363.t1 | AT1G20132 | 26.765 | 340 | 211 | 13 | 30 | 355 | 61 | 376 | 2.76e-24 | 103 |
MS.gene057363.t1 | AT1G75920 | 29.355 | 310 | 179 | 11 | 57 | 355 | 28 | 308 | 2.80e-24 | 102 |
MS.gene057363.t1 | AT5G08460 | 27.711 | 332 | 204 | 11 | 28 | 344 | 47 | 357 | 3.83e-24 | 102 |
MS.gene057363.t1 | AT5G42170 | 28.060 | 335 | 208 | 12 | 30 | 354 | 50 | 361 | 4.55e-24 | 102 |
MS.gene057363.t1 | AT3G16370 | 26.648 | 349 | 227 | 11 | 20 | 359 | 22 | 350 | 9.34e-24 | 101 |
MS.gene057363.t1 | AT1G75910 | 26.471 | 340 | 209 | 12 | 28 | 355 | 26 | 336 | 1.09e-23 | 100 |
MS.gene057363.t1 | AT2G04570 | 25.575 | 348 | 215 | 12 | 30 | 360 | 28 | 348 | 1.15e-23 | 100 |
MS.gene057363.t1 | AT5G45960 | 25.664 | 339 | 216 | 12 | 30 | 353 | 47 | 364 | 1.54e-23 | 100 |
MS.gene057363.t1 | AT1G75890 | 28.613 | 346 | 211 | 16 | 30 | 355 | 47 | 376 | 2.16e-23 | 100 |
MS.gene057363.t1 | AT1G59406 | 28.297 | 364 | 230 | 15 | 1 | 355 | 1 | 342 | 1.14e-22 | 98.2 |
MS.gene057363.t1 | AT1G59030 | 28.297 | 364 | 230 | 15 | 1 | 355 | 1 | 342 | 1.14e-22 | 98.2 |
MS.gene057363.t1 | AT1G58725 | 28.297 | 364 | 230 | 15 | 1 | 355 | 1 | 342 | 1.14e-22 | 98.2 |
MS.gene057363.t1 | AT2G30310 | 28.969 | 359 | 223 | 17 | 5 | 350 | 7 | 346 | 1.70e-22 | 97.8 |
MS.gene057363.t1 | AT3G04290 | 28.235 | 340 | 218 | 11 | 29 | 360 | 28 | 349 | 3.48e-22 | 97.1 |
MS.gene057363.t1 | AT5G03820 | 26.005 | 373 | 230 | 17 | 1 | 354 | 4 | 349 | 5.79e-22 | 96.3 |
MS.gene057363.t1 | AT5G33370 | 26.286 | 350 | 212 | 16 | 29 | 360 | 29 | 350 | 7.72e-22 | 95.9 |
MS.gene057363.t1 | AT4G26790 | 26.269 | 335 | 223 | 11 | 28 | 355 | 27 | 344 | 1.41e-21 | 95.1 |
MS.gene057363.t1 | AT4G26790 | 26.269 | 335 | 223 | 11 | 28 | 355 | 27 | 344 | 1.41e-21 | 95.1 |
MS.gene057363.t1 | AT5G03820 | 26.005 | 373 | 230 | 17 | 1 | 354 | 32 | 377 | 1.68e-21 | 95.1 |
MS.gene057363.t1 | AT5G22810 | 27.473 | 364 | 234 | 15 | 1 | 354 | 8 | 351 | 2.55e-21 | 94.4 |
MS.gene057363.t1 | AT3G50400 | 27.632 | 380 | 229 | 15 | 1 | 356 | 1 | 358 | 2.82e-21 | 94.4 |
MS.gene057363.t1 | AT1G53990 | 25.337 | 371 | 232 | 14 | 3 | 357 | 8 | 349 | 3.61e-21 | 94.0 |
MS.gene057363.t1 | AT2G31540 | 28.531 | 354 | 223 | 15 | 18 | 358 | 22 | 358 | 4.06e-21 | 94.0 |
MS.gene057363.t1 | AT1G29670 | 25.610 | 328 | 216 | 10 | 32 | 351 | 34 | 341 | 9.45e-21 | 92.8 |
MS.gene057363.t1 | AT3G09930 | 26.549 | 339 | 212 | 11 | 21 | 349 | 30 | 341 | 9.62e-21 | 92.8 |
MS.gene057363.t1 | AT3G09930 | 26.549 | 339 | 212 | 11 | 21 | 349 | 30 | 341 | 9.62e-21 | 92.8 |
MS.gene057363.t1 | AT1G54000 | 26.765 | 340 | 202 | 14 | 27 | 353 | 33 | 338 | 1.06e-20 | 92.8 |
MS.gene057363.t1 | AT1G58430 | 26.488 | 336 | 219 | 13 | 28 | 353 | 33 | 350 | 1.83e-20 | 92.0 |
MS.gene057363.t1 | AT5G37690 | 24.471 | 331 | 216 | 10 | 34 | 353 | 31 | 338 | 2.01e-20 | 91.7 |
MS.gene057363.t1 | AT1G29670 | 25.915 | 328 | 215 | 10 | 32 | 351 | 102 | 409 | 2.71e-20 | 92.0 |
MS.gene057363.t1 | AT4G28780 | 26.590 | 346 | 216 | 14 | 29 | 360 | 30 | 351 | 3.61e-20 | 91.3 |
MS.gene057363.t1 | AT1G75900 | 27.596 | 337 | 209 | 14 | 30 | 354 | 43 | 356 | 4.37e-20 | 90.9 |
MS.gene057363.t1 | AT1G20130 | 26.686 | 341 | 217 | 11 | 30 | 355 | 204 | 526 | 4.44e-20 | 92.0 |
MS.gene057363.t1 | AT2G19010 | 28.571 | 343 | 197 | 16 | 32 | 361 | 32 | 339 | 5.99e-20 | 90.1 |
MS.gene057363.t1 | AT2G19010 | 28.052 | 385 | 217 | 18 | 1 | 361 | 21 | 369 | 7.69e-20 | 90.5 |
MS.gene057363.t1 | AT1G20130 | 26.686 | 341 | 217 | 11 | 30 | 355 | 184 | 506 | 9.16e-20 | 90.9 |
MS.gene057363.t1 | AT5G18430 | 25.000 | 348 | 221 | 13 | 29 | 360 | 27 | 350 | 1.22e-19 | 89.7 |
MS.gene057363.t1 | AT1G74460 | 26.269 | 335 | 215 | 10 | 32 | 355 | 25 | 338 | 1.51e-19 | 89.4 |
MS.gene057363.t1 | AT1G54020 | 24.859 | 354 | 223 | 14 | 6 | 350 | 8 | 327 | 1.56e-19 | 89.4 |
MS.gene057363.t1 | AT1G58520 | 27.941 | 340 | 197 | 14 | 30 | 355 | 30 | 335 | 1.76e-19 | 89.0 |
MS.gene057363.t1 | AT1G58525 | 27.941 | 340 | 197 | 14 | 30 | 355 | 30 | 335 | 1.76e-19 | 89.0 |
MS.gene057363.t1 | AT5G15720 | 25.182 | 274 | 184 | 8 | 30 | 293 | 30 | 292 | 2.73e-19 | 87.8 |
MS.gene057363.t1 | AT3G53100 | 25.000 | 336 | 220 | 13 | 30 | 354 | 29 | 343 | 9.10e-19 | 87.0 |
MS.gene057363.t1 | AT1G29660 | 25.526 | 333 | 211 | 15 | 32 | 351 | 34 | 342 | 1.40e-18 | 86.7 |
MS.gene057363.t1 | AT2G24560 | 26.667 | 360 | 225 | 15 | 21 | 364 | 24 | 360 | 1.58e-18 | 86.3 |
MS.gene057363.t1 | AT3G14820 | 27.381 | 336 | 208 | 11 | 30 | 354 | 32 | 342 | 1.60e-18 | 86.3 |
MS.gene057363.t1 | AT5G41890 | 25.606 | 371 | 228 | 12 | 11 | 356 | 12 | 359 | 2.16e-18 | 86.3 |
MS.gene057363.t1 | AT2G30220 | 27.374 | 358 | 229 | 15 | 5 | 350 | 7 | 345 | 2.27e-18 | 85.9 |
MS.gene057363.t1 | AT5G03810 | 25.410 | 366 | 240 | 15 | 1 | 354 | 1 | 345 | 3.36e-18 | 85.1 |
MS.gene057363.t1 | AT5G03610 | 24.269 | 342 | 219 | 10 | 25 | 355 | 38 | 350 | 3.69e-18 | 85.1 |
MS.gene057363.t1 | AT5G55050 | 27.920 | 351 | 212 | 14 | 30 | 362 | 39 | 366 | 7.87e-18 | 84.3 |
MS.gene057363.t1 | AT1G75920 | 26.575 | 365 | 193 | 13 | 1 | 355 | 6 | 305 | 1.10e-17 | 83.2 |
MS.gene057363.t1 | AT1G33811 | 25.602 | 332 | 220 | 12 | 31 | 351 | 35 | 350 | 4.50e-17 | 82.0 |
MS.gene057363.t1 | AT1G53940 | 31.273 | 275 | 164 | 11 | 29 | 293 | 38 | 297 | 5.80e-17 | 80.9 |
MS.gene057363.t1 | AT2G19060 | 27.089 | 347 | 199 | 17 | 32 | 359 | 32 | 343 | 2.58e-16 | 79.7 |
MS.gene057363.t1 | AT3G14210 | 26.744 | 344 | 201 | 17 | 26 | 353 | 32 | 340 | 3.34e-16 | 79.7 |
MS.gene057363.t1 | AT5G03600 | 22.917 | 336 | 213 | 11 | 24 | 349 | 8 | 307 | 1.57e-15 | 77.0 |
MS.gene057363.t1 | AT5G37690 | 23.708 | 329 | 213 | 11 | 34 | 353 | 31 | 330 | 1.69e-15 | 77.4 |
MS.gene057363.t1 | AT5G03600 | 22.626 | 358 | 224 | 12 | 9 | 349 | 21 | 342 | 1.80e-15 | 77.4 |
MS.gene057363.t1 | AT2G36325 | 25.680 | 331 | 212 | 12 | 31 | 354 | 48 | 351 | 2.20e-15 | 77.0 |
MS.gene057363.t1 | AT2G19050 | 24.412 | 340 | 215 | 11 | 32 | 359 | 33 | 342 | 6.11e-15 | 75.5 |
MS.gene057363.t1 | AT5G45670 | 23.054 | 334 | 219 | 13 | 32 | 351 | 31 | 340 | 1.19e-13 | 72.0 |
MS.gene057363.t1 | AT2G24560 | 27.682 | 289 | 177 | 13 | 21 | 293 | 24 | 296 | 2.24e-13 | 70.9 |
MS.gene057363.t1 | AT2G04020 | 29.439 | 214 | 132 | 10 | 28 | 232 | 41 | 244 | 8.07e-13 | 68.2 |
MS.gene057363.t1 | AT3G43550 | 27.698 | 278 | 166 | 12 | 30 | 293 | 30 | 286 | 1.14e-12 | 68.2 |
MS.gene057363.t1 | AT2G31550 | 28.019 | 207 | 128 | 8 | 161 | 358 | 23 | 217 | 1.63e-12 | 66.6 |
MS.gene057363.t1 | AT2G04020 | 30.000 | 210 | 128 | 10 | 28 | 228 | 41 | 240 | 2.36e-12 | 67.8 |
MS.gene057363.t1 | AT5G33370 | 24.382 | 283 | 175 | 12 | 29 | 293 | 29 | 290 | 6.49e-12 | 66.2 |
MS.gene057363.t1 | AT4G16230 | 27.542 | 236 | 143 | 9 | 1 | 221 | 3 | 225 | 6.51e-12 | 65.5 |
MS.gene057363.t1 | AT4G18970 | 22.561 | 328 | 216 | 13 | 32 | 345 | 30 | 333 | 6.65e-12 | 66.6 |
MS.gene057363.t1 | AT4G18970 | 22.561 | 328 | 216 | 13 | 32 | 345 | 30 | 333 | 8.56e-12 | 66.6 |
Find 61 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCTTCAAAACTAATAAAT+TGG | 0.141859 | 3.1:+57139368 | MS.gene057363:CDS |
AAAGAAGACTATGATGAATT+TGG | 0.241383 | 3.1:+57138979 | MS.gene057363:CDS |
GTGATCAAATGCAGCATTTC+CGG | 0.268623 | 3.1:-57137954 | None:intergenic |
CATTAAATGTGCAATTTGAT+TGG | 0.321915 | 3.1:+57138418 | MS.gene057363:CDS |
ACGAGAGATAATTCCCTTGA+TGG | 0.349662 | 3.1:+57138671 | MS.gene057363:CDS |
ATGAAGATCTTCATTCTGTT+TGG | 0.355610 | 3.1:+57137833 | MS.gene057363:CDS |
AGAGTCACCGAAGTTGAATA+TGG | 0.389848 | 3.1:-57137921 | None:intergenic |
GCGGTAGAGCTAGTGGTTCC+AGG | 0.394718 | 3.1:+57138901 | MS.gene057363:CDS |
TTAATTGTAGCTGAGGCATA+TGG | 0.396651 | 3.1:+57138252 | MS.gene057363:intron |
GACATCAAGTGCAGTTGAAC+CGG | 0.404703 | 3.1:-57138352 | None:intergenic |
CAATACAGATCATGATGATA+TGG | 0.412215 | 3.1:-57139313 | None:intergenic |
TATTTGCTTATAAGCGGCTT+CGG | 0.415948 | 3.1:-57139407 | None:intergenic |
TTGAAGTATGTTGAACCATA+AGG | 0.422999 | 3.1:-57138001 | None:intergenic |
TCCTTCAAAACTAATAAATT+GGG | 0.433608 | 3.1:+57139369 | MS.gene057363:CDS |
CGACTCATCATAGATTTCAT+AGG | 0.433635 | 3.1:+57138052 | MS.gene057363:CDS |
TCAGAGCAAACTGTTGTATT+CGG | 0.437942 | 3.1:-57139346 | None:intergenic |
ATTTGATCACCTCAAAGAAA+TGG | 0.440475 | 3.1:+57137967 | MS.gene057363:CDS |
TTGTTTATAGTGGGAGAGAT+TGG | 0.442235 | 3.1:+57138603 | MS.gene057363:CDS |
AAACAGAATGAAGATCTTCA+TGG | 0.445778 | 3.1:-57137831 | None:intergenic |
CATATCATCATGATCTGTAT+TGG | 0.459149 | 3.1:+57139314 | MS.gene057363:CDS |
CCATCAGGACGCATGTCAAA+TGG | 0.466839 | 3.1:+57138028 | MS.gene057363:CDS |
TATCAAGCACCACAACAGTA+TGG | 0.472277 | 3.1:+57139135 | MS.gene057363:CDS |
TTTGATGGATTCAACCATCA+AGG | 0.475082 | 3.1:-57138685 | None:intergenic |
TGTCAGGCTTTAATTGAAGA+AGG | 0.476299 | 3.1:+57138877 | MS.gene057363:intron |
TAAGCTATCTTGAAAGGAGC+AGG | 0.481547 | 3.1:-57139475 | None:intergenic |
TTTAGAGAAGGATATGCAAA+AGG | 0.485906 | 3.1:-57139451 | None:intergenic |
AATATACTATCTTAGCTTGA+GGG | 0.487430 | 3.1:-57139083 | None:intergenic |
CACCCCATTGGAAAGTTCCC+TGG | 0.497541 | 3.1:-57138919 | None:intergenic |
GACTTATGTAAAAGCAAAGA+AGG | 0.499168 | 3.1:+57138459 | MS.gene057363:CDS |
GCTTATAAGCAAATAGCTAA+AGG | 0.500430 | 3.1:+57139415 | MS.gene057363:CDS |
AAAGCATGTTGTGGAGGAAG+TGG | 0.510426 | 3.1:+57139289 | MS.gene057363:CDS |
GTTCCAGGGAACTTTCCAAT+GGG | 0.514992 | 3.1:+57138916 | MS.gene057363:CDS |
TAATTGTAGCTGAGGCATAT+GGG | 0.522458 | 3.1:+57138253 | MS.gene057363:intron |
CAACTCTAAGCTATCTTGAA+AGG | 0.524346 | 3.1:-57139481 | None:intergenic |
TTTAGCTATTTGCTTATAAG+CGG | 0.529705 | 3.1:-57139413 | None:intergenic |
TTGATGGATTCAACCATCAA+GGG | 0.538358 | 3.1:-57138684 | None:intergenic |
TTTGGCATCACCTTTGCATG+TGG | 0.539669 | 3.1:+57137851 | MS.gene057363:CDS |
TGGTGCTTGATATAAACGTC+TGG | 0.541930 | 3.1:-57139124 | None:intergenic |
CCATTTGACATGCGTCCTGA+TGG | 0.543757 | 3.1:-57138028 | None:intergenic |
ACATACTTCAAACATCCATC+AGG | 0.546171 | 3.1:+57138013 | MS.gene057363:CDS |
AATATGGCTTCATACGGTAG+AGG | 0.557506 | 3.1:-57137905 | None:intergenic |
GGTTCCAGGGAACTTTCCAA+TGG | 0.563863 | 3.1:+57138915 | MS.gene057363:CDS |
TTGGTGATATTCTTATAGGC+CGG | 0.575246 | 3.1:-57138288 | None:intergenic |
CGGTAGAGCTAGTGGTTCCA+GGG | 0.577023 | 3.1:+57138902 | MS.gene057363:CDS |
ATAGCTAAAGGTTTAATCGA+AGG | 0.579347 | 3.1:+57139427 | MS.gene057363:CDS |
TCAAAACTAATAAATTGGGA+TGG | 0.581957 | 3.1:+57139373 | MS.gene057363:CDS |
GGTGACTCTACAAGTGATAC+CGG | 0.585156 | 3.1:+57137935 | MS.gene057363:CDS |
AGAAGGAGCGGTAGAGCTAG+TGG | 0.586129 | 3.1:+57138894 | MS.gene057363:CDS |
AAATATACTATCTTAGCTTG+AGG | 0.588022 | 3.1:-57139084 | None:intergenic |
ATTTGTATAACATACATTGG+TGG | 0.593190 | 3.1:-57138712 | None:intergenic |
GGAGTTAATTTCGCTTACGC+CGG | 0.599725 | 3.1:+57138333 | MS.gene057363:CDS |
GGCTTTAATTGAAGAAGGAG+CGG | 0.599772 | 3.1:+57138882 | MS.gene057363:intron |
TGCACATTTAATGATTCCGT+CGG | 0.600139 | 3.1:-57138408 | None:intergenic |
ATGTCAGTATTACACCCCAT+TGG | 0.600994 | 3.1:-57138931 | None:intergenic |
AAGTTGAATATGGCTTCATA+CGG | 0.613834 | 3.1:-57137911 | None:intergenic |
TAGTGGAGTCACTGCACCGA+CGG | 0.624496 | 3.1:+57138392 | MS.gene057363:CDS |
TATGAAGCCATATTCAACTT+CGG | 0.629345 | 3.1:+57137914 | MS.gene057363:CDS |
CTCCACACACCATACTGTTG+TGG | 0.629875 | 3.1:-57139144 | None:intergenic |
CATCATGATCTGTATTGGTG+TGG | 0.633040 | 3.1:+57139319 | MS.gene057363:CDS |
TTCCAGGGAACTTTCCAATG+GGG | 0.642288 | 3.1:+57138917 | MS.gene057363:CDS |
TAAGCGGCTTCGGTAAAATG+TGG | 0.667134 | 3.1:-57139397 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATTTAATTATGTTTGTC+AGG | + | chr3.1:57138861-57138880 | MS.gene057363:intron | 15.0% |
!!! | AATAATTGTGTTTAAGTTAT+AGG | + | chr3.1:57138796-57138815 | MS.gene057363:intron | 15.0% |
!!! | CTAAAATAATCTATTTTATG+AGG | + | chr3.1:57138167-57138186 | MS.gene057363:intron | 15.0% |
!! | AAAAACTCATTGTTTATAGT+GGG | + | chr3.1:57138594-57138613 | MS.gene057363:CDS | 20.0% |
!! | AAGATTTGTATAACATACAT+TGG | - | chr3.1:57138718-57138737 | None:intergenic | 20.0% |
!! | AATGTACATAAATTAGTGAA+TGG | - | chr3.1:57139230-57139249 | None:intergenic | 20.0% |
!! | ATCCTTCAAAACTAATAAAT+TGG | + | chr3.1:57139368-57139387 | MS.gene057363:CDS | 20.0% |
!! | ATGGAAAAATTAATTCCTTA+TGG | + | chr3.1:57137986-57138005 | MS.gene057363:CDS | 20.0% |
!! | ATGTACATAAATTAGTGAAT+GGG | - | chr3.1:57139229-57139248 | None:intergenic | 20.0% |
!! | GAAACAATGAAAATTTAACA+AGG | - | chr3.1:57139184-57139203 | None:intergenic | 20.0% |
!! | TCCTTCAAAACTAATAAATT+GGG | + | chr3.1:57139369-57139388 | MS.gene057363:CDS | 20.0% |
!! | TTTATGTACATTAATGATGT+AGG | + | chr3.1:57139238-57139257 | MS.gene057363:intron | 20.0% |
!!! | AAATATTTTAGTGGTATTAG+TGG | + | chr3.1:57138375-57138394 | MS.gene057363:CDS | 20.0% |
!!! | ATAGATTATTTTAGAGTTCT+TGG | - | chr3.1:57138161-57138180 | None:intergenic | 20.0% |
!!! | TTAATTTTTCCATTTCTTTG+AGG | - | chr3.1:57137979-57137998 | None:intergenic | 20.0% |
! | AAAATAACATGCAAGGATTT+AGG | - | chr3.1:57138491-57138510 | None:intergenic | 25.0% |
! | AAAGAAGACTATGATGAATT+TGG | + | chr3.1:57138979-57138998 | MS.gene057363:CDS | 25.0% |
! | AACAAAACAAACGTATTGTT+AGG | - | chr3.1:57138545-57138564 | None:intergenic | 25.0% |
! | AGGTATTAGTGAATAACTAA+TGG | + | chr3.1:57138816-57138835 | MS.gene057363:intron | 25.0% |
! | ATTTGTATAACATACATTGG+TGG | - | chr3.1:57138715-57138734 | None:intergenic | 25.0% |
! | CAAAAACTCATTGTTTATAG+TGG | + | chr3.1:57138593-57138612 | MS.gene057363:CDS | 25.0% |
! | CATTAAATGTGCAATTTGAT+TGG | + | chr3.1:57138418-57138437 | MS.gene057363:CDS | 25.0% |
! | TCAAAACTAATAAATTGGGA+TGG | + | chr3.1:57139373-57139392 | MS.gene057363:CDS | 25.0% |
! | TTTAGCTATTTGCTTATAAG+CGG | - | chr3.1:57139416-57139435 | None:intergenic | 25.0% |
!! | AAATATACTATCTTAGCTTG+AGG | - | chr3.1:57139087-57139106 | None:intergenic | 25.0% |
!! | AATATACTATCTTAGCTTGA+GGG | - | chr3.1:57139086-57139105 | None:intergenic | 25.0% |
!! | GAGGTCGTTAATAATTTTTA+AGG | + | chr3.1:57138186-57138205 | MS.gene057363:intron | 25.0% |
!!! | CTTGATGTCAAATATTTTAG+TGG | + | chr3.1:57138366-57138385 | MS.gene057363:CDS | 25.0% |
!!! | GATTTTGGTGATATTCTTAT+AGG | - | chr3.1:57138295-57138314 | None:intergenic | 25.0% |
!!! | TCCCAATTTATTAGTTTTGA+AGG | - | chr3.1:57139373-57139392 | None:intergenic | 25.0% |
!!! | TTCTTTGCTTTTACATAAGT+CGG | - | chr3.1:57138460-57138479 | None:intergenic | 25.0% |
!!! | TTTCTGTTTTATTGTCTCTA+TGG | - | chr3.1:57139061-57139080 | None:intergenic | 25.0% |
AAGTTGAATATGGCTTCATA+CGG | - | chr3.1:57137914-57137933 | None:intergenic | 30.0% | |
AATCCCAGATGCTATAAAAA+AGG | + | chr3.1:57138311-57138330 | MS.gene057363:CDS | 30.0% | |
ATAGCTAAAGGTTTAATCGA+AGG | + | chr3.1:57139427-57139446 | MS.gene057363:CDS | 30.0% | |
ATCCCAGATGCTATAAAAAA+GGG | + | chr3.1:57138312-57138331 | MS.gene057363:CDS | 30.0% | |
ATGAAGATCTTCATTCTGTT+TGG | + | chr3.1:57137833-57137852 | MS.gene057363:CDS | 30.0% | |
ATTTGATCACCTCAAAGAAA+TGG | + | chr3.1:57137967-57137986 | MS.gene057363:CDS | 30.0% | |
CAATACAGATCATGATGATA+TGG | - | chr3.1:57139316-57139335 | None:intergenic | 30.0% | |
CATATCATCATGATCTGTAT+TGG | + | chr3.1:57139314-57139333 | MS.gene057363:CDS | 30.0% | |
GACTTATGTAAAAGCAAAGA+AGG | + | chr3.1:57138459-57138478 | MS.gene057363:CDS | 30.0% | |
GCTTATAAGCAAATAGCTAA+AGG | + | chr3.1:57139415-57139434 | MS.gene057363:CDS | 30.0% | |
TAGTGAATAACTAATGGTCT+TGG | + | chr3.1:57138822-57138841 | MS.gene057363:intron | 30.0% | |
TATGAAGCCATATTCAACTT+CGG | + | chr3.1:57137914-57137933 | MS.gene057363:CDS | 30.0% | |
TCACACAAAAATAACATGCA+AGG | - | chr3.1:57138498-57138517 | None:intergenic | 30.0% | |
TTGAAGTATGTTGAACCATA+AGG | - | chr3.1:57138004-57138023 | None:intergenic | 30.0% | |
TTTAGAGAAGGATATGCAAA+AGG | - | chr3.1:57139454-57139473 | None:intergenic | 30.0% | |
! | GAGCTAGTGAAATTTTCAAT+CGG | - | chr3.1:57138223-57138242 | None:intergenic | 30.0% |
! | TGTAGGTTTTACATCTGATA+AGG | + | chr3.1:57139255-57139274 | MS.gene057363:intron | 30.0% |
!! | TACATTGGTGGTATTTTTGA+TGG | - | chr3.1:57138703-57138722 | None:intergenic | 30.0% |
!! | TCTTTGCTTTTACATAAGTC+GGG | - | chr3.1:57138459-57138478 | None:intergenic | 30.0% |
!! | TTTTATAGCATCTGGGATTT+TGG | - | chr3.1:57138310-57138329 | None:intergenic | 30.0% |
!!! | TCTCATTTTAATTGTAGCTG+AGG | + | chr3.1:57138245-57138264 | MS.gene057363:intron | 30.0% |
ACATACTTCAAACATCCATC+AGG | + | chr3.1:57138013-57138032 | MS.gene057363:CDS | 35.0% | |
CGACTCATCATAGATTTCAT+AGG | + | chr3.1:57138052-57138071 | MS.gene057363:CDS | 35.0% | |
TAATTGTAGCTGAGGCATAT+GGG | + | chr3.1:57138253-57138272 | MS.gene057363:intron | 35.0% | |
TATTTGCTTATAAGCGGCTT+CGG | - | chr3.1:57139410-57139429 | None:intergenic | 35.0% | |
TCAGAGCAAACTGTTGTATT+CGG | - | chr3.1:57139349-57139368 | None:intergenic | 35.0% | |
TGCACATTTAATGATTCCGT+CGG | - | chr3.1:57138411-57138430 | None:intergenic | 35.0% | |
TTAATTGTAGCTGAGGCATA+TGG | + | chr3.1:57138252-57138271 | MS.gene057363:intron | 35.0% | |
TTCTTATAGGCCGGTAAAAA+TGG | - | chr3.1:57138282-57138301 | None:intergenic | 35.0% | |
! | TGTCAGGCTTTAATTGAAGA+AGG | + | chr3.1:57138877-57138896 | MS.gene057363:intron | 35.0% |
! | TTGGTGATATTCTTATAGGC+CGG | - | chr3.1:57138291-57138310 | None:intergenic | 35.0% |
! | TTGTTTATAGTGGGAGAGAT+TGG | + | chr3.1:57138603-57138622 | MS.gene057363:CDS | 35.0% |
! | TTTTACATCTGATAAGGTCG+AGG | + | chr3.1:57139261-57139280 | MS.gene057363:CDS | 35.0% |
!! | TTGATGGATTCAACCATCAA+GGG | - | chr3.1:57138687-57138706 | None:intergenic | 35.0% |
!! | TTTGATGGATTCAACCATCA+AGG | - | chr3.1:57138688-57138707 | None:intergenic | 35.0% |
!!! | ACTCCCTTTTTTATAGCATC+TGG | - | chr3.1:57138318-57138337 | None:intergenic | 35.0% |
!!! | ATATGGGTTGCCATTTTTAC+CGG | + | chr3.1:57138269-57138288 | MS.gene057363:CDS | 35.0% |
!!! | CTCCCTTTTTTATAGCATCT+GGG | - | chr3.1:57138317-57138336 | None:intergenic | 35.0% |
AATATGGCTTCATACGGTAG+AGG | - | chr3.1:57137908-57137927 | None:intergenic | 40.0% | |
ACGAGAGATAATTCCCTTGA+TGG | + | chr3.1:57138671-57138690 | MS.gene057363:CDS | 40.0% | |
AGAGTCACCGAAGTTGAATA+TGG | - | chr3.1:57137924-57137943 | None:intergenic | 40.0% | |
ATGTCAGTATTACACCCCAT+TGG | - | chr3.1:57138934-57138953 | None:intergenic | 40.0% | |
GTGATCAAATGCAGCATTTC+CGG | - | chr3.1:57137957-57137976 | None:intergenic | 40.0% | |
TAAGCTATCTTGAAAGGAGC+AGG | - | chr3.1:57139478-57139497 | None:intergenic | 40.0% | |
TATCAAGCACCACAACAGTA+TGG | + | chr3.1:57139135-57139154 | MS.gene057363:CDS | 40.0% | |
TCCAAAAAAGCCACATGCAA+AGG | - | chr3.1:57137864-57137883 | None:intergenic | 40.0% | |
TGGTGCTTGATATAAACGTC+TGG | - | chr3.1:57139127-57139146 | None:intergenic | 40.0% | |
! | CATCATGATCTGTATTGGTG+TGG | + | chr3.1:57139319-57139338 | MS.gene057363:CDS | 40.0% |
! | GGCTTTAATTGAAGAAGGAG+CGG | + | chr3.1:57138882-57138901 | MS.gene057363:intron | 40.0% |
!!! | AAAGGAGCAGGTTTTAGAGA+AGG | - | chr3.1:57139466-57139485 | None:intergenic | 40.0% |
!!! | ACCTTTGCATGTGGCTTTTT+TGG | + | chr3.1:57137860-57137879 | MS.gene057363:CDS | 40.0% |
!!! | GAGGTTTTGAAAGCATGTTG+TGG | + | chr3.1:57139280-57139299 | MS.gene057363:CDS | 40.0% |
!!! | GTTTTGAAAGCATGTTGTGG+AGG | + | chr3.1:57139283-57139302 | MS.gene057363:CDS | 40.0% |
AAAGCATGTTGTGGAGGAAG+TGG | + | chr3.1:57139289-57139308 | MS.gene057363:CDS | 45.0% | |
GACATCAAGTGCAGTTGAAC+CGG | - | chr3.1:57138355-57138374 | None:intergenic | 45.0% | |
GGAGTTAATTTCGCTTACGC+CGG | + | chr3.1:57138333-57138352 | MS.gene057363:CDS | 45.0% | |
GGTGACTCTACAAGTGATAC+CGG | + | chr3.1:57137935-57137954 | MS.gene057363:CDS | 45.0% | |
GTTCCAGGGAACTTTCCAAT+GGG | + | chr3.1:57138916-57138935 | MS.gene057363:CDS | 45.0% | |
TAAGCGGCTTCGGTAAAATG+TGG | - | chr3.1:57139400-57139419 | None:intergenic | 45.0% | |
TTCCAGGGAACTTTCCAATG+GGG | + | chr3.1:57138917-57138936 | MS.gene057363:CDS | 45.0% | |
TTTGGCATCACCTTTGCATG+TGG | + | chr3.1:57137851-57137870 | MS.gene057363:CDS | 45.0% | |
CACCACAACAGTATGGTGTG+TGG | + | chr3.1:57139142-57139161 | MS.gene057363:intron | 50.0% | |
CCATCAGGACGCATGTCAAA+TGG | + | chr3.1:57138028-57138047 | MS.gene057363:CDS | 50.0% | |
CCATTTGACATGCGTCCTGA+TGG | - | chr3.1:57138031-57138050 | None:intergenic | 50.0% | |
CTCCACACACCATACTGTTG+TGG | - | chr3.1:57139147-57139166 | None:intergenic | 50.0% | |
GGTTCCAGGGAACTTTCCAA+TGG | + | chr3.1:57138915-57138934 | MS.gene057363:CDS | 50.0% | |
AGAAGGAGCGGTAGAGCTAG+TGG | + | chr3.1:57138894-57138913 | MS.gene057363:CDS | 55.0% | |
CACCCCATTGGAAAGTTCCC+TGG | - | chr3.1:57138922-57138941 | None:intergenic | 55.0% | |
CGGTAGAGCTAGTGGTTCCA+GGG | + | chr3.1:57138902-57138921 | MS.gene057363:CDS | 55.0% | |
TAGTGGAGTCACTGCACCGA+CGG | + | chr3.1:57138392-57138411 | MS.gene057363:CDS | 55.0% | |
GCGGTAGAGCTAGTGGTTCC+AGG | + | chr3.1:57138901-57138920 | MS.gene057363:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 57137833 | 57139498 | 57137833 | ID=MS.gene057363 |
chr3.1 | mRNA | 57137833 | 57139498 | 57137833 | ID=MS.gene057363.t1;Parent=MS.gene057363 |
chr3.1 | exon | 57137833 | 57138073 | 57137833 | ID=MS.gene057363.t1.exon1;Parent=MS.gene057363.t1 |
chr3.1 | CDS | 57137833 | 57138073 | 57137833 | ID=cds.MS.gene057363.t1;Parent=MS.gene057363.t1 |
chr3.1 | exon | 57138262 | 57138480 | 57138262 | ID=MS.gene057363.t1.exon2;Parent=MS.gene057363.t1 |
chr3.1 | CDS | 57138262 | 57138480 | 57138262 | ID=cds.MS.gene057363.t1;Parent=MS.gene057363.t1 |
chr3.1 | exon | 57138577 | 57138719 | 57138577 | ID=MS.gene057363.t1.exon3;Parent=MS.gene057363.t1 |
chr3.1 | CDS | 57138577 | 57138719 | 57138577 | ID=cds.MS.gene057363.t1;Parent=MS.gene057363.t1 |
chr3.1 | exon | 57138883 | 57139156 | 57138883 | ID=MS.gene057363.t1.exon4;Parent=MS.gene057363.t1 |
chr3.1 | CDS | 57138883 | 57139156 | 57138883 | ID=cds.MS.gene057363.t1;Parent=MS.gene057363.t1 |
chr3.1 | exon | 57139260 | 57139498 | 57139260 | ID=MS.gene057363.t1.exon5;Parent=MS.gene057363.t1 |
chr3.1 | CDS | 57139260 | 57139498 | 57139260 | ID=cds.MS.gene057363.t1;Parent=MS.gene057363.t1 |
Gene Sequence |
Protein sequence |