Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057453.t1 | XP_013447567.1 | 88.2 | 629 | 72 | 2 | 1 | 629 | 1 | 627 | 1.10E-226 | 796.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057453.t1 | Q9LIA4 | 51.7 | 414 | 157 | 8 | 98 | 503 | 78 | 456 | 2.6e-91 | 337.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057453.t1 | A0A072TWR4 | 88.2 | 629 | 72 | 2 | 1 | 629 | 1 | 627 | 8.0e-227 | 796.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057453 | MS.gene91625 | 0.834648 | 2.65E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057453.t1 | MTR_7g013700 | 93.959 | 629 | 36 | 2 | 1 | 629 | 1 | 627 | 0.0 | 1096 |
| MS.gene057453.t1 | MTR_7g013700 | 96.794 | 499 | 16 | 0 | 1 | 499 | 1 | 499 | 0.0 | 982 |
| MS.gene057453.t1 | MTR_7g013700 | 96.794 | 499 | 16 | 0 | 1 | 499 | 1 | 499 | 0.0 | 981 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057453.t1 | AT3G29390 | 46.751 | 631 | 231 | 20 | 1 | 596 | 1 | 561 | 9.44e-153 | 453 |
| MS.gene057453.t1 | AT3G29390 | 49.903 | 515 | 178 | 14 | 1 | 499 | 1 | 451 | 3.10e-143 | 424 |
Find 181 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGGGCTCAAAAGCCTTTC+TGG | 0.100405 | 7.2:-83670007 | MS.gene057453:CDS |
| TCTTGGTGGGGTTGCATTTC+CGG | 0.126673 | 7.2:-83678532 | MS.gene057453:CDS |
| CTTGGTGGGGTTGCATTTCC+GGG | 0.238796 | 7.2:-83678531 | MS.gene057453:CDS |
| CCTTGCCCCACCCAAGCAAT+TGG | 0.245640 | 7.2:-83670026 | MS.gene057453:CDS |
| TCACATTTGGTCCACGTATA+CGG | 0.248024 | 7.2:+83676532 | None:intergenic |
| CCGTGCTTTGCTGCTGAAGC+AGG | 0.262946 | 7.2:+83678454 | None:intergenic |
| TCAGTTGAATCATAAAATTT+AGG | 0.266358 | 7.2:+83670388 | None:intergenic |
| GTTCTTGGCGGAAAATCTTT+TGG | 0.279932 | 7.2:-83675161 | MS.gene057453:CDS |
| CTTGCCCCACCCAAGCAATT+GGG | 0.281755 | 7.2:-83670025 | MS.gene057453:CDS |
| ATTTGAGCCTTCATCGTTTC+CGG | 0.282227 | 7.2:+83675360 | None:intergenic |
| TTACCTTCACCTTTGGCTAA+TGG | 0.286064 | 7.2:-83676702 | MS.gene057453:CDS |
| CAACAGGAGGCGAGTGCCTC+AGG | 0.303530 | 7.2:+83673164 | None:intergenic |
| AATTTAGGTGGAGGAGGTGG+TGG | 0.310202 | 7.2:+83670403 | None:intergenic |
| CCTTGAAGATGCTAAGTTCT+TGG | 0.312098 | 7.2:-83675176 | MS.gene057453:CDS |
| TATGCTCCTCCTTTAGTATC+AGG | 0.314921 | 7.2:-83673256 | MS.gene057453:CDS |
| TCAGGTGGAACTAGCTATAT+TGG | 0.323250 | 7.2:-83673238 | MS.gene057453:CDS |
| TTCTCCATCGAGCGGCGCAT+TGG | 0.326314 | 7.2:+83677237 | None:intergenic |
| TCATAATGTGATTTATATAC+TGG | 0.330482 | 7.2:+83675422 | None:intergenic |
| TTCTGCTTTACCTTCACCTT+TGG | 0.334269 | 7.2:-83676709 | MS.gene057453:CDS |
| CTGTTTGGTGCCGATGTTGC+GGG | 0.335764 | 7.2:+83673127 | None:intergenic |
| AGATACTTTAGTCAAGCTAA+TGG | 0.358969 | 7.2:-83670108 | MS.gene057453:CDS |
| CGGTGGCTGGATCAACTTCT+TGG | 0.362742 | 7.2:+83670495 | None:intergenic |
| TCTCCATCGAGCGGCGCATT+GGG | 0.378773 | 7.2:+83677238 | None:intergenic |
| TTAGTCAAGCTAATGGAATA+TGG | 0.379441 | 7.2:-83670101 | MS.gene057453:CDS |
| TGGGGCTCAAAAGCCTTTCT+GGG | 0.382975 | 7.2:-83670006 | MS.gene057453:CDS |
| ACAAAATCTGATGCAGTTCC+TGG | 0.384698 | 7.2:-83670328 | MS.gene057453:intron |
| AAGACAAGAGCAATAGTTTA+CGG | 0.386481 | 7.2:-83670354 | MS.gene057453:CDS |
| TTAGGTGGAGGAGGTGGTGG+GGG | 0.386881 | 7.2:+83670406 | None:intergenic |
| GTTGACTTGAATTCTCTGTT+TGG | 0.394022 | 7.2:+83673112 | None:intergenic |
| CCAAGAACTTAGCATCTTCA+AGG | 0.398164 | 7.2:+83675176 | None:intergenic |
| CTATAGTACCAGTGCACCTC+TGG | 0.398580 | 7.2:+83677375 | None:intergenic |
| GGAACTAGCTATATTGGATA+TGG | 0.398594 | 7.2:-83673232 | MS.gene057453:CDS |
| GGTGGTGGAGGCATAGTTCT+TGG | 0.401662 | 7.2:+83670448 | None:intergenic |
| TTTAGGTGGAGGAGGTGGTG+GGG | 0.401933 | 7.2:+83670405 | None:intergenic |
| TTGAGCAATGCTGTGCCTCT+TGG | 0.402806 | 7.2:-83678549 | MS.gene057453:CDS |
| ATACTTAGAGGACGTGGTTC+CGG | 0.410832 | 7.2:-83675379 | MS.gene057453:CDS |
| AATCACATTATGAATGAAAC+AGG | 0.411822 | 7.2:-83675412 | MS.gene057453:CDS |
| GTTCCTACAGCAAACATGAT+TGG | 0.414715 | 7.2:-83673280 | MS.gene057453:CDS |
| AAAACCTAGTGAAAGATATG+AGG | 0.417088 | 7.2:-83670554 | MS.gene057453:CDS |
| GAAATCCGTTGGACGGTGGC+TGG | 0.417507 | 7.2:+83670482 | None:intergenic |
| TTGAGCCCCAATTGCTTGGG+TGG | 0.430824 | 7.2:+83670019 | None:intergenic |
| CGTGCTTTGCTGCTGAAGCA+GGG | 0.430910 | 7.2:+83678455 | None:intergenic |
| TTGTATCTCCACATCTCTGC+AGG | 0.432234 | 7.2:-83677208 | MS.gene057453:CDS |
| CAGCACTGTAACCTTGTTGT+AGG | 0.433729 | 7.2:+83673401 | None:intergenic |
| CGACGGAAGATAACAGCGTT+AGG | 0.439666 | 7.2:-83680065 | MS.gene057453:CDS |
| CTATAAACCTGCTGGGGTGA+TGG | 0.441382 | 7.2:+83673466 | None:intergenic |
| TGAGCCCCAATTGCTTGGGT+GGG | 0.441979 | 7.2:+83670020 | None:intergenic |
| GTTAGTCGCAGATGCTTCAT+TGG | 0.442068 | 7.2:+83680032 | None:intergenic |
| GCAATGCTGTGCCTCTTGGT+GGG | 0.450310 | 7.2:-83678545 | MS.gene057453:CDS |
| TTTGTAGAAAGAAGAGAAAG+TGG | 0.450754 | 7.2:-83678629 | MS.gene057453:intron |
| GGAAACGATGAAGGCTCAAA+TGG | 0.457437 | 7.2:-83675358 | MS.gene057453:CDS |
| ATAGTTCTTGGTGGAGGTGC+TGG | 0.460770 | 7.2:+83670460 | None:intergenic |
| TGCTGTTCCATCACCCCAGC+AGG | 0.461123 | 7.2:-83673473 | MS.gene057453:CDS |
| GAGCAATTACCAACTCATCT+TGG | 0.462175 | 7.2:+83677560 | None:intergenic |
| CACATTTGGTCCACGTATAC+GGG | 0.464985 | 7.2:+83676533 | None:intergenic |
| TTGCCCCACCCAAGCAATTG+GGG | 0.468242 | 7.2:-83670024 | MS.gene057453:CDS |
| GGAGCAACTGTTGAAGCAAC+AGG | 0.469640 | 7.2:+83673148 | None:intergenic |
| GAGCCCCAATTGCTTGGGTG+GGG | 0.471871 | 7.2:+83670021 | None:intergenic |
| GGTGGCTGGATCAACTTCTT+GGG | 0.473315 | 7.2:+83670496 | None:intergenic |
| TTTGCGCCCTTTGAAACAAC+TGG | 0.473914 | 7.2:+83673025 | None:intergenic |
| CCGGGTACTGCCATCCCAAC+TGG | 0.475672 | 7.2:+83678582 | None:intergenic |
| ACCTTGTTGTAGGGGTGAAA+TGG | 0.478559 | 7.2:+83673411 | None:intergenic |
| CAAGAGCAACTTGTTGCAAA+GGG | 0.478926 | 7.2:+83673188 | None:intergenic |
| GAAATCTGCTTCGACAATGA+AGG | 0.479062 | 7.2:+83673439 | None:intergenic |
| TCAGCAGCAAAGCACGGCGG+CGG | 0.479374 | 7.2:-83678448 | MS.gene057453:CDS |
| TGGATCAACTTCTTGGGAGC+AGG | 0.480870 | 7.2:+83670502 | None:intergenic |
| GGATCAACCAGCAGAGTCAT+TGG | 0.482601 | 7.2:-83678607 | MS.gene057453:CDS |
| AGCACTGTAACCTTGTTGTA+GGG | 0.483732 | 7.2:+83673402 | None:intergenic |
| CTGGTACTATAGTTATAACT+AGG | 0.488256 | 7.2:-83677364 | MS.gene057453:intron |
| GAACAACCAGTTGTTTCAAA+GGG | 0.489017 | 7.2:-83673031 | MS.gene057453:CDS |
| AAAGGGCGCAAAACACGATC+AGG | 0.490041 | 7.2:-83673014 | MS.gene057453:intron |
| TCACCCCAGCAGGTTTATAG+TGG | 0.490678 | 7.2:-83673463 | MS.gene057453:CDS |
| CCGCCCAATGCGCCGCTCGA+TGG | 0.491497 | 7.2:-83677241 | MS.gene057453:CDS |
| AAGGGCCACTATAAACCTGC+TGG | 0.493339 | 7.2:+83673458 | None:intergenic |
| CCAATTGCTTGGGTGGGGCA+AGG | 0.495513 | 7.2:+83670026 | None:intergenic |
| GTATATACCGGCTGTGGAGG+TGG | 0.496657 | 7.2:+83673526 | None:intergenic |
| AGCAATGCTGTGCCTCTTGG+TGG | 0.497968 | 7.2:-83678546 | MS.gene057453:CDS |
| TCCTCTTCTTGCAGATCCAG+AGG | 0.498402 | 7.2:-83677391 | MS.gene057453:intron |
| GGAGCAACAGTAATACTTAG+AGG | 0.498713 | 7.2:-83675391 | MS.gene057453:CDS |
| CCTGCTTCAGCAGCAAAGCA+CGG | 0.499544 | 7.2:-83678454 | MS.gene057453:CDS |
| CTCCAGCCAACAACTGCTGT+GGG | 0.502068 | 7.2:+83673371 | None:intergenic |
| GTGTGGAATGTGGTGCTTTG+AGG | 0.502978 | 7.2:-83675129 | MS.gene057453:intron |
| GTTGGCTGGAGTTCAAAGTT+CGG | 0.503571 | 7.2:-83673359 | MS.gene057453:CDS |
| AGAACAACCAGTTGTTTCAA+AGG | 0.505325 | 7.2:-83673032 | MS.gene057453:CDS |
| CGATGATTGAAGAAATGTTA+AGG | 0.507747 | 7.2:-83676758 | MS.gene057453:CDS |
| TTGCAGATCCAGAGGTGCAC+TGG | 0.508058 | 7.2:-83677383 | MS.gene057453:intron |
| TAGTGAAAGATATGAGGGCT+TGG | 0.510913 | 7.2:-83670548 | MS.gene057453:CDS |
| ATTTAGGTGGAGGAGGTGGT+GGG | 0.510960 | 7.2:+83670404 | None:intergenic |
| TGCTGTTCCACCTCCACAGC+AGG | 0.511021 | 7.2:-83673503 | MS.gene057453:CDS |
| GTATATACCTGCTGTGGAGG+TGG | 0.512133 | 7.2:+83673496 | None:intergenic |
| TGCTGTTCCACCTCCACAGC+CGG | 0.513357 | 7.2:-83673533 | MS.gene057453:CDS |
| AGCAGGGCTGCAGCAGCCAA+TGG | 0.515649 | 7.2:+83678471 | None:intergenic |
| TAAAATTTAGGTGGAGGAGG+TGG | 0.516302 | 7.2:+83670400 | None:intergenic |
| ATCATGTTTGCTGTAGGAAC+TGG | 0.518844 | 7.2:+83673283 | None:intergenic |
| CAGAGTCATTGGTACCAGTT+GGG | 0.519571 | 7.2:-83678596 | MS.gene057453:CDS |
| GATTGAAGAAATGTTAAGGC+AGG | 0.520985 | 7.2:-83676754 | MS.gene057453:CDS |
| TTCGTTACAAGCTGACAAAA+CGG | 0.521117 | 7.2:-83677504 | MS.gene057453:CDS |
| TCATAAAATTTAGGTGGAGG+AGG | 0.523877 | 7.2:+83670397 | None:intergenic |
| CAATGCTGTGCCTCTTGGTG+GGG | 0.524826 | 7.2:-83678544 | MS.gene057453:CDS |
| GAATCATAAAATTTAGGTGG+AGG | 0.526336 | 7.2:+83670394 | None:intergenic |
| ACCTTTGGCTAATGGAGTGA+AGG | 0.526930 | 7.2:-83676694 | MS.gene057453:intron |
| CCAGCCAACAACTGCTGTGG+GGG | 0.530405 | 7.2:+83673373 | None:intergenic |
| CGTGGTTCCGGAAACGATGA+AGG | 0.530684 | 7.2:-83675367 | MS.gene057453:CDS |
| CTAGTTCCACCTGATACTAA+AGG | 0.535592 | 7.2:+83673247 | None:intergenic |
| CGGGCAACAATGTTCCATGA+TGG | 0.536226 | 7.2:+83676552 | None:intergenic |
| GTTGAATCATAAAATTTAGG+TGG | 0.536412 | 7.2:+83670391 | None:intergenic |
| GCAAGAGCAACTTGTTGCAA+AGG | 0.537070 | 7.2:+83673187 | None:intergenic |
| TTGTAGAAAGAAGAGAAAGT+GGG | 0.540279 | 7.2:-83678628 | MS.gene057453:intron |
| GGAGGCATAGTTCTTGGTGG+AGG | 0.541057 | 7.2:+83670454 | None:intergenic |
| GCAGAGTCATTGGTACCAGT+TGG | 0.543948 | 7.2:-83678597 | MS.gene057453:CDS |
| TGAAGATGCTAAGTTCTTGG+CGG | 0.544446 | 7.2:-83675173 | MS.gene057453:CDS |
| GACGGAAGATAACAGCGTTA+GGG | 0.544698 | 7.2:-83680064 | MS.gene057453:CDS |
| GCAAAAGATCCAAGATGAGT+TGG | 0.547153 | 7.2:-83677569 | MS.gene057453:CDS |
| AAGCCCTCATATCTTTCACT+AGG | 0.547275 | 7.2:+83670550 | None:intergenic |
| AACATTGTTGCCCGTATACG+TGG | 0.549230 | 7.2:-83676543 | MS.gene057453:CDS |
| GGTGGAACAGCAGTATATAC+CGG | 0.550171 | 7.2:+83673514 | None:intergenic |
| TGGATTAGTCAAAAGAGCGC+TGG | 0.554612 | 7.2:+83678491 | None:intergenic |
| GGTGGAGGCATAGTTCTTGG+TGG | 0.556156 | 7.2:+83670451 | None:intergenic |
| GTCATTGGTACCAGTTGGGA+TGG | 0.557948 | 7.2:-83678592 | MS.gene057453:CDS |
| ACTAGCTATATTGGATATGG+TGG | 0.562011 | 7.2:-83673229 | MS.gene057453:CDS |
| GCTTTGATGCTGACCCATCA+TGG | 0.562203 | 7.2:-83676566 | MS.gene057453:CDS |
| TGTATCTCCACATCTCTGCA+GGG | 0.563046 | 7.2:-83677207 | MS.gene057453:CDS |
| AAACCTAGTGAAAGATATGA+GGG | 0.565448 | 7.2:-83670553 | MS.gene057453:CDS |
| CCAGTTGGGATGGCAGTACC+CGG | 0.566248 | 7.2:-83678582 | MS.gene057453:CDS |
| TTGCTCAAAGGAAGAACTCC+GGG | 0.566817 | 7.2:+83678564 | None:intergenic |
| ACTGGTACCAATGACTCTGC+TGG | 0.567474 | 7.2:+83678600 | None:intergenic |
| TATGTTGCAGATAAAAGATA+CGG | 0.569195 | 7.2:-83676814 | MS.gene057453:intron |
| GCTCCTCCTTTAGTATCAGG+TGG | 0.571031 | 7.2:-83673253 | MS.gene057453:CDS |
| CCATCGAGCGGCGCATTGGG+CGG | 0.571266 | 7.2:+83677241 | None:intergenic |
| TGTTGCAAAGGGGTAGCTTG+AGG | 0.575707 | 7.2:+83673199 | None:intergenic |
| AAAAGAGCGCTGGATATCAC+TGG | 0.577911 | 7.2:+83678501 | None:intergenic |
| AACAGGAGGCGAGTGCCTCA+GGG | 0.579798 | 7.2:+83673165 | None:intergenic |
| ACAGCAGTATATACCGGCTG+TGG | 0.581725 | 7.2:+83673520 | None:intergenic |
| GATATCACTGGTGTCACACC+CGG | 0.581967 | 7.2:+83678513 | None:intergenic |
| AAATCTGCTTCGACAATGAA+GGG | 0.583682 | 7.2:+83673440 | None:intergenic |
| AGGGCCACTATAAACCTGCT+GGG | 0.586963 | 7.2:+83673459 | None:intergenic |
| AACAGTTGCTCCCGCAACAT+CGG | 0.587777 | 7.2:-83673137 | MS.gene057453:CDS |
| CATGAGCCCCTGCAGAGATG+TGG | 0.591464 | 7.2:+83677200 | None:intergenic |
| GGGCAACAATGTTCCATGAT+GGG | 0.592169 | 7.2:+83676553 | None:intergenic |
| AGTCAATGACATTGAAGTAG+TGG | 0.594917 | 7.2:+83673318 | None:intergenic |
| TTGATCCAGCCACCGTCCAA+CGG | 0.596693 | 7.2:-83670487 | MS.gene057453:CDS |
| TAACCAATCATGTTTGCTGT+AGG | 0.597312 | 7.2:+83673277 | None:intergenic |
| ACAGATCATAAAGCCCAGAA+AGG | 0.597506 | 7.2:+83669993 | None:intergenic |
| TTGAAGAAATGTTAAGGCAG+GGG | 0.598747 | 7.2:-83676752 | MS.gene057453:CDS |
| TCTGTTTGGTGCCGATGTTG+CGG | 0.598833 | 7.2:+83673126 | None:intergenic |
| ACTCCAGCCAACAACTGCTG+TGG | 0.600814 | 7.2:+83673370 | None:intergenic |
| GCAGTATATACCTGCTGTGG+AGG | 0.601490 | 7.2:+83673493 | None:intergenic |
| ACCTTCACTCCATTAGCCAA+AGG | 0.602338 | 7.2:+83676693 | None:intergenic |
| ATTGCTCAAAGGAAGAACTC+CGG | 0.605179 | 7.2:+83678563 | None:intergenic |
| ACTCCATTAGCCAAAGGTGA+AGG | 0.605652 | 7.2:+83676699 | None:intergenic |
| ATTGCTTGGGTGGGGCAAGG+AGG | 0.609227 | 7.2:+83670029 | None:intergenic |
| GCAGTATATACCGGCTGTGG+AGG | 0.612458 | 7.2:+83673523 | None:intergenic |
| ATTGAAGAAATGTTAAGGCA+GGG | 0.612808 | 7.2:-83676753 | MS.gene057453:CDS |
| GGTGCTGGAAATCCGTTGGA+CGG | 0.613403 | 7.2:+83670475 | None:intergenic |
| TGGAGGTGCTGGAAATCCGT+TGG | 0.616164 | 7.2:+83670471 | None:intergenic |
| GGCTGGAGTTCAAAGTTCGG+AGG | 0.618850 | 7.2:-83673356 | MS.gene057453:CDS |
| AGAGGCACAGCATTGCTCAA+AGG | 0.621194 | 7.2:+83678552 | None:intergenic |
| GCCATTTCACCCCTACAACA+AGG | 0.627198 | 7.2:-83673412 | MS.gene057453:CDS |
| GATATGAGGGCTTGGCTGTG+AGG | 0.629001 | 7.2:-83670540 | MS.gene057453:CDS |
| GACAAAACGGCAGACACAAG+AGG | 0.629420 | 7.2:-83677491 | MS.gene057453:CDS |
| GATGAAGGCTCAAATGGAGA+AGG | 0.633616 | 7.2:-83675352 | MS.gene057453:intron |
| ACAGCAGTATATACCTGCTG+TGG | 0.635036 | 7.2:+83673490 | None:intergenic |
| GTATCTCCACATCTCTGCAG+GGG | 0.641588 | 7.2:-83677206 | MS.gene057453:CDS |
| GGGCCACTATAAACCTGCTG+GGG | 0.642770 | 7.2:+83673460 | None:intergenic |
| AGATAAAAGATACGGCAGAA+CGG | 0.643698 | 7.2:-83676806 | MS.gene057453:CDS |
| GGAAATGCAACCCCACCAAG+AGG | 0.646988 | 7.2:+83678534 | None:intergenic |
| GCACTGTAACCTTGTTGTAG+GGG | 0.647830 | 7.2:+83673403 | None:intergenic |
| TCCAGCCAACAACTGCTGTG+GGG | 0.650806 | 7.2:+83673372 | None:intergenic |
| AACAAGTTGCTCTTGCCCTG+AGG | 0.654514 | 7.2:-83673180 | MS.gene057453:CDS |
| ACAGTAATACTTAGAGGACG+TGG | 0.663370 | 7.2:-83675385 | MS.gene057453:CDS |
| AGGATAAACGGACAGCTCAG+AGG | 0.670048 | 7.2:-83673066 | MS.gene057453:CDS |
| GCAGAGATGTGGAGATACAA+CGG | 0.679946 | 7.2:+83677211 | None:intergenic |
| GCTGGAAATCCGTTGGACGG+TGG | 0.682271 | 7.2:+83670478 | None:intergenic |
| GTTCCACCTGATACTAAAGG+AGG | 0.693764 | 7.2:+83673250 | None:intergenic |
| GCTTCAGCAGCAAAGCACGG+CGG | 0.699008 | 7.2:-83678451 | MS.gene057453:CDS |
| AAGAGCAACTTGTTGCAAAG+GGG | 0.703758 | 7.2:+83673189 | None:intergenic |
| GATACAATCAGTGTGGAATG+TGG | 0.707664 | 7.2:-83675139 | MS.gene057453:CDS |
| GCAACTGTTGAAGCAACAGG+AGG | 0.707757 | 7.2:+83673151 | None:intergenic |
| AAAACGGCAGACACAAGAGG+AGG | 0.723241 | 7.2:-83677488 | MS.gene057453:intron |
| AAGCTTCACAAACAAGACAG+AGG | 0.730651 | 7.2:-83680008 | MS.gene057453:intron |
| AATCGCTTAAACAATGACGA+CGG | 0.741098 | 7.2:-83680082 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 83669998 | 83680091 | 83669998 | ID=MS.gene057453 |
| chr7.2 | mRNA | 83669998 | 83680091 | 83669998 | ID=MS.gene057453.t1;Parent=MS.gene057453 |
| chr7.2 | exon | 83680009 | 83680091 | 83680009 | ID=MS.gene057453.t1.exon1;Parent=MS.gene057453.t1 |
| chr7.2 | CDS | 83680009 | 83680091 | 83680009 | ID=cds.MS.gene057453.t1;Parent=MS.gene057453.t1 |
| chr7.2 | exon | 83678431 | 83678644 | 83678431 | ID=MS.gene057453.t1.exon2;Parent=MS.gene057453.t1 |
| chr7.2 | CDS | 83678431 | 83678644 | 83678431 | ID=cds.MS.gene057453.t1;Parent=MS.gene057453.t1 |
| chr7.2 | exon | 83677489 | 83677590 | 83677489 | ID=MS.gene057453.t1.exon3;Parent=MS.gene057453.t1 |
| chr7.2 | CDS | 83677489 | 83677590 | 83677489 | ID=cds.MS.gene057453.t1;Parent=MS.gene057453.t1 |
| chr7.2 | exon | 83677365 | 83677399 | 83677365 | ID=MS.gene057453.t1.exon4;Parent=MS.gene057453.t1 |
| chr7.2 | CDS | 83677365 | 83677399 | 83677365 | ID=cds.MS.gene057453.t1;Parent=MS.gene057453.t1 |
| chr7.2 | exon | 83677201 | 83677276 | 83677201 | ID=MS.gene057453.t1.exon5;Parent=MS.gene057453.t1 |
| chr7.2 | CDS | 83677201 | 83677276 | 83677201 | ID=cds.MS.gene057453.t1;Parent=MS.gene057453.t1 |
| chr7.2 | exon | 83676695 | 83676826 | 83676695 | ID=MS.gene057453.t1.exon6;Parent=MS.gene057453.t1 |
| chr7.2 | CDS | 83676695 | 83676826 | 83676695 | ID=cds.MS.gene057453.t1;Parent=MS.gene057453.t1 |
| chr7.2 | exon | 83676536 | 83676613 | 83676536 | ID=MS.gene057453.t1.exon7;Parent=MS.gene057453.t1 |
| chr7.2 | CDS | 83676536 | 83676613 | 83676536 | ID=cds.MS.gene057453.t1;Parent=MS.gene057453.t1 |
| chr7.2 | exon | 83675353 | 83675446 | 83675353 | ID=MS.gene057453.t1.exon8;Parent=MS.gene057453.t1 |
| chr7.2 | CDS | 83675353 | 83675446 | 83675353 | ID=cds.MS.gene057453.t1;Parent=MS.gene057453.t1 |
| chr7.2 | exon | 83675130 | 83675247 | 83675130 | ID=MS.gene057453.t1.exon9;Parent=MS.gene057453.t1 |
| chr7.2 | CDS | 83675130 | 83675247 | 83675130 | ID=cds.MS.gene057453.t1;Parent=MS.gene057453.t1 |
| chr7.2 | exon | 83673015 | 83673579 | 83673015 | ID=MS.gene057453.t1.exon10;Parent=MS.gene057453.t1 |
| chr7.2 | CDS | 83673015 | 83673579 | 83673015 | ID=cds.MS.gene057453.t1;Parent=MS.gene057453.t1 |
| chr7.2 | exon | 83670329 | 83670590 | 83670329 | ID=MS.gene057453.t1.exon11;Parent=MS.gene057453.t1 |
| chr7.2 | CDS | 83670329 | 83670590 | 83670329 | ID=cds.MS.gene057453.t1;Parent=MS.gene057453.t1 |
| chr7.2 | exon | 83669998 | 83670128 | 83669998 | ID=MS.gene057453.t1.exon12;Parent=MS.gene057453.t1 |
| chr7.2 | CDS | 83669998 | 83670128 | 83669998 | ID=cds.MS.gene057453.t1;Parent=MS.gene057453.t1 |
| Gene Sequence |
| Protein sequence |
