AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057939


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057939.t1 MTR_4g124090 28.873 284 144 6 1 278 395 626 5.70e-21 98.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057939.t1 AT5G07810 49.507 812 331 14 1 785 426 1185 0.0 765
MS.gene057939.t1 AT1G48310 29.537 281 144 6 1 277 398 628 5.72e-23 105
MS.gene057939.t1 AT1G48310 29.537 281 144 6 1 277 393 623 5.85e-23 105
MS.gene057939.t1 AT1G48310 29.210 291 148 7 1 287 393 629 1.83e-21 100

Find 158 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACCTCTATACGTGTATTT+TGG 0.109557 3.4:+15773865 MS.gene057939:CDS
CAAATGAGTGGAAGAATTTA+AGG 0.164671 3.4:+15774038 MS.gene057939:CDS
TGCACACACCTTGTTCAATT+TGG 0.173787 3.4:-15774801 None:intergenic
AATTGTTCTTGATCCTTAAT+AGG 0.204581 3.4:-15776454 None:intergenic
CTTATAATTTGCCGGCGTTT+TGG 0.210586 3.4:-15766363 None:intergenic
TGCTTATAGGAATGCTCTTC+TGG 0.213022 3.4:+15774009 MS.gene057939:CDS
ATCAGATGCTGTTTGGAAAA+AGG 0.213049 3.4:+15774353 MS.gene057939:CDS
AGTGCTTCCTGCATAGATTT+AGG 0.240093 3.4:+15773052 MS.gene057939:CDS
CAGATTAAAATTGCGATAAT+AGG 0.245191 3.4:+15771266 MS.gene057939:intron
CTTGGAATTGCAAAACTATC+TGG 0.246743 3.4:+15768170 MS.gene057939:CDS
CTTGCACCCCGTGAAGAATT+AGG 0.270576 3.4:-15776347 None:intergenic
TTCTTCCGCTTTGCAATATT+CGG 0.273138 3.4:-15774913 None:intergenic
TTTAGGTCAGGCTTCAGTTT+TGG 0.292944 3.4:+15773069 MS.gene057939:CDS
TGTACCCTCGTCGTCTTTCC+AGG 0.295990 3.4:-15774876 None:intergenic
AGTGGAGATGCAGCCTATTA+AGG 0.299026 3.4:+15776441 MS.gene057939:CDS
TCAAGGATAACCCTGCTTAT+AGG 0.313364 3.4:+15773996 MS.gene057939:CDS
GGTGTTCTAGCAGCAGGTTT+TGG 0.317520 3.4:+15771287 MS.gene057939:CDS
AGGCTGCATCTCCACTTTCT+TGG 0.319126 3.4:-15776434 None:intergenic
AGCACAAGATGTTGTGTTCT+TGG 0.322306 3.4:+15771325 MS.gene057939:CDS
ATACCTCCGCCTTTATATAC+TGG 0.329305 3.4:-15775172 None:intergenic
AAAAGATCTTCAAAATATTC+AGG 0.342350 3.4:-15774567 None:intergenic
TCATTCCATCCACTTATTGC+AGG 0.343187 3.4:+15768209 MS.gene057939:CDS
ATGTTCTGAAGAGAGTTTAG+AGG 0.349221 3.4:+15773132 MS.gene057939:CDS
AGGTGTATCCTTCCTGTGTA+TGG 0.353784 3.4:-15773848 None:intergenic
TACAAAGAGGCTCATCCTTC+AGG 0.356924 3.4:-15774431 None:intergenic
AAGTCAGAGTGCTAATATTA+TGG 0.357570 3.4:+15772928 MS.gene057939:CDS
AGATATGCCTTTGGACAGTT+TGG 0.357967 3.4:+15766470 MS.gene057939:CDS
AGATATGCCTTTGGACAGTT+TGG 0.357967 3.4:+15766634 MS.gene057939:CDS
TACTGCGGATTGTCTATCTC+TGG 0.359167 3.4:-15769899 None:intergenic
GCAACAGTCTTATAATTTGC+CGG 0.363054 3.4:-15766371 None:intergenic
CCTTACCATCAGATGCTGTT+TGG 0.369976 3.4:+15774346 MS.gene057939:CDS
AACTATCTGGGTTTCGTGAA+TGG 0.374844 3.4:+15768183 MS.gene057939:CDS
CACATTGTTCCAGTATATAA+AGG 0.375691 3.4:+15775163 MS.gene057939:CDS
CAAACAACTAAAAGTATTGA+TGG 0.378473 3.4:+15775987 MS.gene057939:CDS
TGCCAGGCATTGCCTTCAAT+TGG 0.385529 3.4:-15775133 None:intergenic
TGAGGACAGGGCTCATCGAC+GGG 0.385802 3.4:+15772102 MS.gene057939:intron
TTCTCATGCGATACTCTTGA+TGG 0.389022 3.4:-15774605 None:intergenic
AGATATACCTCTGGACAGTT+TGG 0.391703 3.4:+15766798 MS.gene057939:CDS
CAATGTTCTTCGGCTTCAAC+AGG 0.399760 3.4:-15773312 None:intergenic
AGTAACTTATTGCGTTCAAT+TGG 0.409336 3.4:-15774061 None:intergenic
GAGCCCAACAGTGATGCTTC+AGG 0.413054 3.4:+15771358 MS.gene057939:CDS
GCAAACCAAGATGATGAATC+TGG 0.424569 3.4:+15772890 MS.gene057939:CDS
GTTTGACAGGGACTAATAAA+TGG 0.432159 3.4:+15774279 MS.gene057939:intron
TCTGCATCTGTTGTTGAAGT+TGG 0.434072 3.4:-15773270 None:intergenic
CAAGCTTATGACAGTCCAAT+TGG 0.434667 3.4:-15774831 None:intergenic
CCAAACAGCATCTGATGGTA+AGG 0.440110 3.4:-15774346 None:intergenic
AAAACCATTACAGCTTCCTT+TGG 0.441373 3.4:+15774087 MS.gene057939:CDS
TTGATGAGAACAATGTTCTT+CGG 0.441496 3.4:-15773322 None:intergenic
ATTGAACGCAATAAGTTACT+TGG 0.442871 3.4:+15774064 MS.gene057939:CDS
ACGGCGCATGACTCCTTTAG+TGG 0.447491 3.4:+15774311 MS.gene057939:CDS
TTCAAAATATTCAGGTGTCT+TGG 0.448813 3.4:-15774559 None:intergenic
TGCTAGTGAAGATATGCCTT+TGG 0.449082 3.4:+15766461 MS.gene057939:CDS
TGCTAGTGAAGATATGCCTT+TGG 0.449082 3.4:+15766625 MS.gene057939:CDS
ATGACCATCTGTAGGATACT+TGG 0.449514 3.4:+15772243 MS.gene057939:intron
CAAGACCAGATTCATCATCT+TGG 0.452084 3.4:-15772895 None:intergenic
CAGGAGTTTATATGTGAGAA+AGG 0.454475 3.4:+15769841 MS.gene057939:intron
TTCTCTGATCCTGCAATAAG+TGG 0.456641 3.4:-15768218 None:intergenic
GAATAGGCACTTCCAGGAAC+CGG 0.457474 3.4:-15776399 None:intergenic
AAGCTTACTTATCAAGAGCT+TGG 0.458665 3.4:+15768152 MS.gene057939:CDS
CTCAGCAACTCAAGGTCCTC+TGG 0.460412 3.4:-15773929 None:intergenic
CTTATCAAAGATCCAATTGA+AGG 0.462398 3.4:+15775121 MS.gene057939:CDS
AACAATGTGATCAGCATGCC+AGG 0.462470 3.4:-15775149 None:intergenic
GAACCTGAAGCATCACTGTT+GGG 0.463294 3.4:-15771361 None:intergenic
TTTATATGTGAGAAAGGAGT+AGG 0.465878 3.4:+15769847 MS.gene057939:CDS
GCTAGCGAATAGGCACTTCC+AGG 0.474036 3.4:-15776405 None:intergenic
ATCCAATTGAAGGCAATGCC+TGG 0.474318 3.4:+15775131 MS.gene057939:CDS
AGAAGAGCATTCCTATAAGC+AGG 0.475828 3.4:-15774007 None:intergenic
TTGGCTGTTAGCTAGCGAAT+AGG 0.476208 3.4:-15776415 None:intergenic
TTGGAATTGCAAAACTATCT+GGG 0.476468 3.4:+15768171 MS.gene057939:CDS
TCATTTGATTTCACTGCAGA+GGG 0.478183 3.4:-15772860 None:intergenic
ACAGCCAAAGGAAGCTGTAA+TGG 0.480320 3.4:-15774091 None:intergenic
TTATAAGACTGTTGCTGAAG+AGG 0.480728 3.4:+15766379 MS.gene057939:CDS
TTCATTTGATTTCACTGCAG+AGG 0.482039 3.4:-15772861 None:intergenic
GCAAATATGATGCGGTGAAA+GGG 0.488899 3.4:+15772327 MS.gene057939:CDS
TTCCTGCATAGATTTAGGTC+AGG 0.492751 3.4:+15773057 MS.gene057939:CDS
TTCAGGACCTAATTCTTCAC+GGG 0.496965 3.4:+15776340 MS.gene057939:intron
TGCTAGTGAAGATATACCTC+TGG 0.497322 3.4:+15766789 MS.gene057939:CDS
CTGAGGACAGGGCTCATCGA+CGG 0.499215 3.4:+15772101 MS.gene057939:intron
ATAATAGGTGTTCTAGCAGC+AGG 0.500174 3.4:+15771281 MS.gene057939:CDS
AATAATACGAAGGGTGCTGC+TGG 0.500691 3.4:+15776021 MS.gene057939:CDS
TAGAAGTGGCCGTGGTAAGA+AGG 0.500937 3.4:+15774383 MS.gene057939:CDS
ATTCAGGACCTAATTCTTCA+CGG 0.503120 3.4:+15776339 MS.gene057939:intron
GTACTCCGTCAAGAACTTTG+TGG 0.504322 3.4:-15768271 None:intergenic
TACCCAAAATACACGTATAG+AGG 0.507355 3.4:-15773868 None:intergenic
TTCGGCTTCAACAGGATGAG+TGG 0.507699 3.4:-15773304 None:intergenic
GGCAAATATGATGCGGTGAA+AGG 0.512960 3.4:+15772326 MS.gene057939:CDS
TAATAAATGGTGGAAGCAAA+CGG 0.515121 3.4:+15774292 MS.gene057939:CDS
GGTGTATCCTTCCTGTGTAT+GGG 0.526599 3.4:-15773847 None:intergenic
CAAAGTTCTTGACGGAGTAC+AGG 0.527095 3.4:+15768274 MS.gene057939:CDS
CATCACCACAAAGTTCTTGA+CGG 0.529330 3.4:+15768266 MS.gene057939:CDS
TCGGCTTCAACAGGATGAGT+GGG 0.540783 3.4:-15773303 None:intergenic
AGCAGTAACATCGTGATGGC+AGG 0.541408 3.4:-15775923 None:intergenic
TGCATCAGTTGAAACACAGT+TGG 0.542446 3.4:+15772829 MS.gene057939:CDS
GAATATAAGACCTTTGTCCC+TGG 0.544754 3.4:+15774858 MS.gene057939:CDS
CTAGCTAACAGCCAAGAAAG+TGG 0.545352 3.4:+15776423 MS.gene057939:CDS
GTTTATCTTAGAAGTGGCCG+TGG 0.546004 3.4:+15774375 MS.gene057939:CDS
TAGCAACAGATTCCTCCGTC+AGG 0.547286 3.4:+15774629 MS.gene057939:CDS
TGACCATCTGTAGGATACTT+GGG 0.548040 3.4:+15772244 MS.gene057939:intron
CGTGTTTCATCTACAACTGA+TGG 0.551566 3.4:+15772305 MS.gene057939:CDS
CAGTTGAAACACAGTTGGAT+AGG 0.552955 3.4:+15772834 MS.gene057939:CDS
CTGATCCTGCAATAAGTGGA+TGG 0.555571 3.4:-15768214 None:intergenic
AGAACCTGAAGCATCACTGT+TGG 0.556451 3.4:-15771362 None:intergenic
AGCCTGACCTAAATCTATGC+AGG 0.556639 3.4:-15773059 None:intergenic
AATAGGCACTTCCAGGAACC+GGG 0.559844 3.4:-15776398 None:intergenic
GTGTGCCGACCTTGTTGTTG+TGG 0.560190 3.4:-15774144 None:intergenic
CTGCTGATGCTGATGAGAAA+CGG 0.561433 3.4:+15773954 MS.gene057939:CDS
CTTCAACAGGATGAGTGGGC+TGG 0.562424 3.4:-15773299 None:intergenic
ACTGCGGATTGTCTATCTCT+GGG 0.565165 3.4:-15769898 None:intergenic
CGTCGTCTTTCCAGGGACAA+AGG 0.567829 3.4:-15774868 None:intergenic
GGATAGCTGATGTCCACTAA+AGG 0.569846 3.4:-15774324 None:intergenic
TAGCATAATTCGACAGCCAA+AGG 0.570348 3.4:-15774103 None:intergenic
TGTGTGCACAAATTGCCAAT+TGG 0.571614 3.4:+15774816 MS.gene057939:CDS
CGTTTCTCATCAGCATCAGC+AGG 0.572257 3.4:-15773953 None:intergenic
AGCATCACTGTTGGGCTCTG+AGG 0.575672 3.4:-15771353 None:intergenic
CTTGTAGATAAGGCGGCTCA+AGG 0.580311 3.4:+15766317 None:intergenic
AACCTCATTTCGATCATCGC+CGG 0.580826 3.4:+15769921 MS.gene057939:CDS
CACTCAAGGCTGGAGCCTGA+AGG 0.585879 3.4:+15774416 MS.gene057939:CDS
TGCTGGTAATAATAATAATG+AGG 0.586514 3.4:+15776038 MS.gene057939:CDS
CAAACAGCATCTGATGGTAA+GGG 0.587626 3.4:-15774345 None:intergenic
TATAGAGTCTGCATCTGTCA+AGG 0.592394 3.4:+15773979 MS.gene057939:CDS
GAGGACAGGGCTCATCGACG+GGG 0.595701 3.4:+15772103 MS.gene057939:intron
CAGCAGGACTCAGCAACTCA+AGG 0.605288 3.4:-15773937 None:intergenic
CATATACGTATTCTGTGCAA+AGG 0.609063 3.4:+15772143 MS.gene057939:CDS
CTCCGGCGATGATCGAAATG+AGG 0.609409 3.4:-15769923 None:intergenic
AGGACAGGGCTCATCGACGG+GGG 0.610061 3.4:+15772104 MS.gene057939:intron
GTACCCTCGTCGTCTTTCCA+GGG 0.611259 3.4:-15774875 None:intergenic
GACAGTTTGGATGAACATGA+TGG 0.611362 3.4:+15766483 MS.gene057939:CDS
GACAGTTTGGATGAACATGA+TGG 0.611362 3.4:+15766647 MS.gene057939:CDS
GCAACTCAAGGTCCTCTGGT+CGG 0.619233 3.4:-15773925 None:intergenic
GTTCCAGTATATAAAGGCGG+AGG 0.620332 3.4:+15775169 MS.gene057939:CDS
ATTATGTCTTGTAGATAAGG+CGG 0.626099 3.4:+15766310 None:intergenic
GATACTCTTGATGGCAGACA+AGG 0.634012 3.4:-15774596 None:intergenic
TGATGCGGTGAAAGGGCTAG+AGG 0.644608 3.4:+15772334 MS.gene057939:CDS
CTCATTTCGATCATCGCCGG+AGG 0.648872 3.4:+15769924 MS.gene057939:CDS
GAAGAGCATTCCTATAAGCA+GGG 0.648964 3.4:-15774006 None:intergenic
AGGTTAGCCCATACACAGGA+AGG 0.651198 3.4:+15773840 MS.gene057939:intron
AACAGTTACCTCCAAAACGC+CGG 0.652750 3.4:+15766352 MS.gene057939:CDS
TGTTCATCCAAACTGTCCAA+AGG 0.654789 3.4:-15766477 None:intergenic
TGTTCATCCAAACTGTCCAA+AGG 0.654789 3.4:-15766641 None:intergenic
TTATGAAAATTTCCGACCAG+AGG 0.657136 3.4:+15773913 MS.gene057939:CDS
ATACTTGGGATGAATCACAT+TGG 0.659346 3.4:+15772258 MS.gene057939:CDS
TGACAGGGACTAATAAATGG+TGG 0.659944 3.4:+15774282 MS.gene057939:intron
GTACAGCAGTAACATCGTGA+TGG 0.660813 3.4:-15775927 None:intergenic
GAACATGAGAACTCTTTGTG+TGG 0.661711 3.4:+15775900 MS.gene057939:CDS
AAGTACTAACCACAACAACA+AGG 0.677180 3.4:+15774135 MS.gene057939:CDS
AGAGGACAATGATAACATAG+AGG 0.682163 3.4:+15773150 MS.gene057939:CDS
CTTCAGGTTAGCCCATACAC+AGG 0.682475 3.4:+15773836 MS.gene057939:intron
GACAGTTTGGATGAACATGA+TGG 0.685395 3.4:+15766811 MS.gene057939:CDS
ATTGTTCCAGTATATAAAGG+CGG 0.692697 3.4:+15775166 MS.gene057939:CDS
TCAGGACCTAATTCTTCACG+GGG 0.695560 3.4:+15776341 MS.gene057939:intron
TTGTCCCTGGAAAGACGACG+AGG 0.699804 3.4:+15774871 MS.gene057939:CDS
TGTTCATCCAAACTGTCCAG+AGG 0.703707 3.4:-15766805 None:intergenic
TGATCGAAATGAGGTTACTG+CGG 0.719986 3.4:-15769914 None:intergenic
TAAATGTTCCAACCTGACGG+AGG 0.721651 3.4:-15774641 None:intergenic
AACTGATGGCAAATATGATG+CGG 0.724006 3.4:+15772319 MS.gene057939:CDS
TAGCACCGAATATTGCAAAG+CGG 0.728676 3.4:+15774908 MS.gene057939:CDS
TGTCCCTGGAAAGACGACGA+GGG 0.738054 3.4:+15774872 MS.gene057939:CDS
GGTGCAAGAAAGTATGCACG+AGG 0.742866 3.4:+15776362 MS.gene057939:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.4 gene 15766324 15776461 15766324 ID=MS.gene057939
chr3.4 mRNA 15766324 15776461 15766324 ID=MS.gene057939.t1;Parent=MS.gene057939
chr3.4 exon 15766324 15766504 15766324 ID=MS.gene057939.t1.exon1;Parent=MS.gene057939.t1
chr3.4 CDS 15766324 15766504 15766324 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15766594 15766668 15766594 ID=MS.gene057939.t1.exon2;Parent=MS.gene057939.t1
chr3.4 CDS 15766594 15766668 15766594 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15766758 15766832 15766758 ID=MS.gene057939.t1.exon3;Parent=MS.gene057939.t1
chr3.4 CDS 15766758 15766832 15766758 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15768150 15768295 15768150 ID=MS.gene057939.t1.exon4;Parent=MS.gene057939.t1
chr3.4 CDS 15768150 15768295 15768150 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15769844 15769945 15769844 ID=MS.gene057939.t1.exon5;Parent=MS.gene057939.t1
chr3.4 CDS 15769844 15769945 15769844 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15771269 15771379 15771269 ID=MS.gene057939.t1.exon6;Parent=MS.gene057939.t1
chr3.4 CDS 15771269 15771379 15771269 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15772111 15772164 15772111 ID=MS.gene057939.t1.exon7;Parent=MS.gene057939.t1
chr3.4 CDS 15772111 15772164 15772111 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15772257 15772355 15772257 ID=MS.gene057939.t1.exon8;Parent=MS.gene057939.t1
chr3.4 CDS 15772257 15772355 15772257 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15772758 15772949 15772758 ID=MS.gene057939.t1.exon9;Parent=MS.gene057939.t1
chr3.4 CDS 15772758 15772949 15772758 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15773046 15773171 15773046 ID=MS.gene057939.t1.exon10;Parent=MS.gene057939.t1
chr3.4 CDS 15773046 15773171 15773046 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15773261 15773365 15773261 ID=MS.gene057939.t1.exon11;Parent=MS.gene057939.t1
chr3.4 CDS 15773261 15773365 15773261 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15773842 15774156 15773842 ID=MS.gene057939.t1.exon12;Parent=MS.gene057939.t1
chr3.4 CDS 15773842 15774156 15773842 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15774288 15774475 15774288 ID=MS.gene057939.t1.exon13;Parent=MS.gene057939.t1
chr3.4 CDS 15774288 15774475 15774288 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15774548 15774650 15774548 ID=MS.gene057939.t1.exon14;Parent=MS.gene057939.t1
chr3.4 CDS 15774548 15774650 15774548 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15774793 15774938 15774793 ID=MS.gene057939.t1.exon15;Parent=MS.gene057939.t1
chr3.4 CDS 15774793 15774938 15774793 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15775111 15775190 15775111 ID=MS.gene057939.t1.exon16;Parent=MS.gene057939.t1
chr3.4 CDS 15775111 15775190 15775111 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15775884 15776059 15775884 ID=MS.gene057939.t1.exon17;Parent=MS.gene057939.t1
chr3.4 CDS 15775884 15776059 15775884 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
chr3.4 exon 15776345 15776461 15776345 ID=MS.gene057939.t1.exon18;Parent=MS.gene057939.t1
chr3.4 CDS 15776345 15776461 15776345 ID=cds.MS.gene057939.t1;Parent=MS.gene057939.t1
Gene Sequence

>MS.gene057939

ATAAGGCGGCTCAAGGAACATGTGTTGCAACAGTTACCTCCAAAACGCCGGCAAATTATAAGACTGTTGCTGAAGAGGTCAGATATAGTTGCTGCAAAAACTGCAGTTGGGGTATTGAAGATTGATTCCTCTGAAAATGCTAGTGAAGATATGCCTTTGGACAGTTTGGATGAACATGATGGTATGGTCGAGGAATCTTTGTCTTTACTTTATTGGACTAATTTGTGTTTCAGCTAATGACTCGCATAATAGTTTCCACAAAAACTGCAGTTGGGGTATTGAAGATTGATGCCTCTGAAAATGCTAGTGAAGATATGCCTTTGGACAGTTTGGATGAACATGATGGTATGGTCGAGAAATCTTTGCCTTTACTCTACTGAACTAATTTGTGTTTTAGCTAATGACTCGCATAACAGTTGTCTCAAAAACTGCAGTTGGGGTATTGAAGATTGATGCCTCTGAAAATGCTAGTGAAGATATACCTCTGGACAGTTTGGATGAACATGATGGTATGAACAAGGAATCTTTGCCTTTACTCTATTGTACATTGTCTTAGGCCTCACATAATAGTTTTCAGTTAATTTGCATTTCAGCCAATGACTCACATAATAGTTTTCAGATCAACATTGTCTTAGGCCTCACATATTAGGAAGGAATTGCTATTCGCTGAGATGCTTATGAAATTCTGTGTGAAATCAGTACATAAAAATAATGCATTAGTTTGAATTGTTTATCATTTGAAATTGAATAAATGAATTGTTGTCCTAATCTGTTAGGTGTGTTAGTTGAGGGGGTTAGAGTTAGTTAGGACAAGTCTGTTTTATAAAATAGTATGACAGGATGAGTCTAGGAATTTATGCGAGAATTGGGGCCTTGGGCATGTGATGTGTGGAAACACTTGAAGTTTTGGTAGTTTGTAGAAGTATTCATAGTACATTATATCTATTATTTTTAGAATAATAAAATTGTGGATTTCTATCAACTGATATCTGAGTTTCAAATGTTGGTGGCTTTGCTCAAAGGGGAGCTACAAAAATGTAATATGACATGTGTGATTTGGTCGTTGGGGATCAACTGATGAGTTGGATGGTGGTGGTTTTGGCGAGTGGTGGGCATTGGAGACGGCAACTGGAATCTGCCTGAAAGACTAGGAGACACTGGACGAATGGCTAATTAGATTGGAATTGACAGTACTGGATGGCGGCAATGACTGTTGCAGGAAAATATGTCTAAGGTGTTCAGATAGAAGAACATGATGCATGAAAAGGTTAAGGCTGGAAACTTGAGATGAAACAGTTTCTGGCAAAATAAGAAACATCAATGGACAGTGGGTCCACCGCATTTCATGGATTAGGGTGATATCTTGTTAGGCTCTTGATCCTATGTTGAGAACAAGGAAAATGTGCGAGCATATCATTTTAGATACAAAGATTAATGTTACCTTATTCACTTTCCTTGAAAGAGAGAACCTAGGCATCTGATGTTGAAACAGTGTGTGTAAACTATACAAGAGTCCATTTTACATAGGAATGATTATATAATTACAAAATAAATATAGTAGATTCTAAAACTATTTACATAATACAATAAGCATATACAATAATTAGAAAGATCATAAACATATTTTCCCGCCTTTTTGATCCGATAATATTAGCAACCAACTTTTGAATTGAGAAACATAGAATGTGGAACCAAATTGACTCTAAGCTTCCAAACAGTAATTCCTGATGATACCACTTTAACATTAACATTAACATACTTATTCTTGAAAAAAAATCATATACTCATTAAACGTTTTAACTATTCTTCATCCTAACCATTGTCAGGAAAGCTTACTTATCAAGAGCTTGGAATTGCAAAACTATCTGGGTTTCGTGAATGGCTTTCATTCCATCCACTTATTGCAGGATCAGAGAATGCTTCAAAGATGATAATTTTTGCTCATCACCACAAAGTTCTTGACGGAGTACAGGTGCATTTCTCATCAGTTGGTAGCTTTAATTAAGTGATTGAGTTTGTTGCAGCTCTTTAGTTGTTCATTTGGGAGTCAGTAAGTAGTAGTAGTGGTGGTGGTGGTGGTGGTGGTGGTAGCAACACTCACTCTAACACTCTTTTCAACACCAATTCTCTTGATGGGTGAAATTCATGTTGGTCCCACCACTTTATGTGGGACACATTTTCAATATGGTGGGACCCACATGAATTTCACCCAATAAGAGAGAGAATGTTGCAAATACAGTGTTAGAGTGAGTGTTGCTAGTGCTACTCAAGTAGTAGATCTAACCATGTATGTTATTTGTTAAAATTTTGTAAGAGTTCACTATAAATACCAACTAAATATCTTTCATCTTATTGGCGAAAACCCAATTCCCACATTGACTAGATTTTAGACATATGATGACCTAAATAGAGTTTATAAAGCTAACTGAGCAAGTTGGATTTGTGCGTAAGAAACGAAATTTATGTTGGTATCACGTCCTATCATAGATTTGTTGTTGGGATACCCATATTATAATTGCACCGGTCCAATAGCTATGTGTGTGACAGGGTGTATTACTATTGGAGAAAAATCCAAGCCCGACATTAACTGGATATATGGCCTAAGTGGAGTTTATATAGTGTTAAGAGTCCCACATTGGATATGATATGGTCTAGTGAAGTGCTATAAGTGGAAGAAATCCCTCACCTTAGAAGATGTTTTTTGTAAGCATGAGTTAGGTCCAATCCAAATTCTAAGATAGGATTAGATCGTATCCGATCCATTAGGCCACCCGGTATCTAGCCATTTGGGTCATGGTCCTGATGTCCAGGCCTAGGCATGAGCAGATTTTTTAAGAGGCCTGCATTGTATGTGATATGATATGGTCTGGAAAAATGTTTATGTGGAAAACATCCCTCACCTTACAAGCAGTTTTTTTTTTTGTAACAGACTGGCAACCTTCTTGTGCTACCAATCTGCCGCTCATAGGAATATTTACCCCCCTCATGTGGTATTTCTTTCGCCTCCAGGTCACGGGTTCGAATCCTTGTCGGAGGAGAAAGAAATACCGCATGGGAGGAGTAGATATTCCTATGAGTGGCAGATTGGTAGCACTGGAGGGTAGCCAGTCTTTTACAACAATGAGTTAGATATATCCTAAAATGTAAGATAAATCTTTGACAATCATTACCTTACTAGCCATGTAAGGGGTTGTGTTAGGTTCAAAATCTAAGAGATTTGAATCAGGTTTTTCTCATTCCAATAAATCATCATATGTCCCATTTAATAAATCATGCTACCAATCTACCATCATGAAGTAACTCAGAAGTTGCTGCTCCTTATTAAATCACTTTGACAGTTCGGGACCTAGTTTAGTAACTGGAGTAACTCATATCTTCGTTTTGATTTTGTGTCCATTCATTTGAACAGGTGATTATCATACTGTATATTAACATTGGCCTTAAGGCTTTGATGACTTTGATGTCCCACAAACATTTAAATTTTATTTCTACTATAAAGATTGTCTTCTGAACCATTCAGGAGTTTATATGTGAGAAAGGAGTAGGTTTTGTGCGAATAGATGGACATACGCTACCCAGAGATAGACAATCCGCAGTAACCTCATTTCGATCATCGCCGGAGGTATTGTAAACTTTACATTTTTTTCCTGAATTTATTGTGATACAGATAATTTATTCTCACTTTCATTTTTCGCCATATTCATAAGTTTTTATATTACTTTGATGCTTTCTTACACTCCCACCAGTCCTGTTCATAGAAATAAAAGTAAATCACAGACCAATAATAAAGCACATTCAAAGGATTTACTGCTATTTAATTTTTTTTTCCTTTCCAAAACTGCTCTTAGCGTTTATTACATGAAACCCACTTGTGTAGGGAAGGTGCATTTTAAGTAAAATATATAAAAAGAATCTTACAAATTTACAATTGAATAGGGGTATATAAGAAATTTCAATAATTAATGCACTTAGAAAGTGAACTGAATTTATTACATTTAGGGCCAGTAAAGTAACCTAGTTGTCTCTTATAATTAGGACAGGAGGTAGTTTTAACTTTGAACCAGAATTTTCCGATGATCAGTTCCGTTTTCACTGTTCTATTTGATGAATTGATGTAGTATTTTTTTCTAGCTGTTGGAATGTAGGATGTTTATGAATTGTCCATAAAATTAACATGTCTCATTCAAGATAAAATCTGGTGCGAAATTATTGAATGAGCAGTTTTACATCGTTGAATAAAAGTCATGAATTACTTAAAATCAACCACATTGAACATTTTTGCGACTATCTGTGTCCACATTAAAACACAACTTATATAAACCTTTTATTATAACATTTACAACATTATATCAATATAGCTAACAAGATAGCTGCAACATTATAAAACCTATTTATGTCGTTCTAATTCATAGACATGTGAGTGTGTGACATATATATGAATTTATTAATGACGGGACAATATTCTCTAACCAAAACAAATCAAAAGCAACTGCAGAAACGAATGTCATTAAGCAAATAGCACCAGATTCTTGGAGACCTCAGTTTGTGTTCCAATGTTTTTTTTTTTAAATTCTAAAAATCATTATTTAGGAAAGAGATTAGATATAGCTAAAAAATTGGATTGCCAAAGTTTAAAATGTAGGTAATATATAAGATATTGTACTCTTAGAGTCAACATATGATTTTGTAATTAGTAGAAATGTTCTCTGTTGTAATGTACTACATAAACTTCTCATTCAAAGAGAATACTATTCTAATAGCATAGATTGAATTTATTTTTCCATAAGCTTCATACACTTACTTATTCTAGCTCATATTATAAAATTAGATATCACCAATGGAAATAAAATACCAGCCTCAAAACATGCCGGTCATCATCTAGTTGACATAAGTTTTGAGTATTTTACCTTCTTATTTTGACTTGTTAGTTACATGTGCATTTCAGATTAAAATTGCGATAATAGGTGTTCTAGCAGCAGGTTTTGGACTTGATTTCTCGGCAGCACAAGATGTTGTGTTCTTGGAGCTACCTCAGAGCCCAACAGTGATGCTTCAGGTTCTGTTCGATAGGATATCACTTCATAAAAGTTTGTTTATAACTATTGTTGGGTTGTAGGATAGGCTTCGTTTTCCGGTGACTTGTGTTTTATCTTGTCATTACAATTGATTATGAAACATGAATACAGTTGCAAATGACTCTGCAGATGACTGACTAGTGTAGCAAAAGAAATAAAATAGTCCTTTTGTTGTGTGATTTACAATAATAATAATTAATGAAACATCAATATCATGTATCAAATGCCTCTCAGTCTGGTGCTGGACGCTAAAATCATAATGAACTGTAGAAACACATCTAAAGTTGATTCTCGTTAAAGGAACAATTAAAATGGGAACTCAGGTTAATCTATAAAATATACTAGATAATCTTATGGAAAAGTGCAGCAAAAATGGAACCTGGGATGATTCCTTCATAATACTGAACCATTAGGCATGTAATGGATCTTCTTTTCATCCTTCTTTTGACAATTATCATGGCTGGTGTTGCATTTCATCAGTCTTATTTACCATGAAAGTGATGCAGTGTTGATAGGTATTAGCTATTAGCTATTAGCTATGAGATGGCACTATAAAGTTTTGCTTAATTGTGGAAATCTCATACAGTTTGTTTGGTGTATTGTACTTGGTAGTTGATGGTGAATTGTAAAAATATGGGGCTATTCTTGATATTGAAATAATATCTTAAATGAATAATACATAATGTTAACATACTTTGTAGGCTGAGGACAGGGCTCATCGACGGGGGCAAACAATGCAGTTAACATATACGTATTCTGTGCAAAGGTAATTAGGTTCTCGTTGATTATGAAGTTTTGAATTAGGGCTTATTGTGATATCCCTCTGTCAAGCACTTATGTTCGAATGACCATCTGTAGGATACTTGGGATGAATCACATTGGAAATATTTGAACACAAGTTTGCATCGTGTTTCATCTACAACTGATGGCAAATATGATGCGGTGAAAGGGCTAGAGGTCTCGCCTCAATTTCTTTAATTTTATTATTTGCTTTTCACCGTTGGTTTTTTTTTTCTTTTTTCGGATAAGTGTTTGCAAACTTTCTTTATATTAATGTTATTTTAAATCTTAAATTTGAACATGTTTTGATTTATGCGTCTGTTGTCTACCATTTATTTTGAAGAAATAAACATTTAAAAGAAATTGATGTATGTGTCTGTGTAACTTTAGGTGTTTAGTTTGTCCAGAGTTGTAATACTCATAAATTTACAATTTTATACATTTTATGCTTTATGAAAAACAAATGAATACAATCCATAATGGATTTGGATCCTTTCCATCTCTCTCCGTTCACTTTGTCTTTCATGTTTTGGTTCTCTTGTATAACATCAGTTTCCTTTTGGGGATGTTGGGTGGCAGGTTGAACGTGTTTCTTTTCTAAACCCATCCTCAAAAATTGATAGATCTGAAGAACAATCTGCATCTGAAGATGCATCAGTTGAAACACAGTTGGATAGGCAACCCTCTGCAGTGAAATCAAATGAAACAGAAGCAAACCAAGATGATGAATCTGGTCTTGTAAACAATATAAGTCAGAGTGCTAATATTATGGTATGACTTAGTTTATACTTTTAAGCTGTTCTGCCTCTGATTTATTTGCTCTATTAGTTGCTTCTTTCTAATTATTATATTTTATTGGAAGAATAGGTTGATAGTGCTTCCTGCATAGATTTAGGTCAGGCTTCAGTTTTGGATGGAAATCTTGATGCAGATGTTTTTTATGCTGGGGATAGATGTTCTGAAGAGAGTTTAGAGGACAATGATAACATAGAGGTGCATTTTCATTGAAGCTTTCTAATGGAAGGAATGACTACTTTAGTTCATGTAATTTTATGAGTACGAGTCTTATTTTTCTGTTTCAGGATAAGAAACCAACTTCAACAACAGATGCAGATGACAACCAGCCCACTCATCCTGTTGAAGCCGAAGAACATTGTTCTCATCAAGTTAATTCTCTGCGTTTTGAGGTAAAAATCATTTGTAGTTTTTGTTTTCATTGCACAAAAAATTTCAGGTCCAGTCAGTCATTGGCTTGATTATTATTCCACATAGTAGAAGCAAAGTTATTGAAAGGAATTTATGTTTATGAAATAATAGTAGAGTTTGTATTCTGCGGGGTTCATCTTTTTCTTTGGTGTATTTGGTTAGAGCGAAATGCCATATTCAATTAGATGTTAGTACCATTACCTATTATTCTACATAATAGAAGCGAAGTTATTGAAAGATTTTATGTTTATTTTATTTGTTTATGAAATAATAGCAGAGCTTGTATTCTGTGGGGTTCATCCTTTTCTTTGGTGTATTTGGTTAGAGTGAAATGCCATATTCAATTAGATGTTAGTACCATTGCCTATGTTATGGCCTCCTTTGGTGTCATGCAAAGACTGGATATCGTAGTTGATTATTCTCATGGGTGCAAAGGTAACATCTGTTTACTCTTCAGGTTAGCCCATACACAGGAAGGATACACCTCTATACGTGTATTTTGGGTAAAGATGCAAGACCACAGCCACGTTATGAAAATTTCCGACCAGAGGACCTTGAGTTGCTGAGTCCTGCTGATGCTGATGAGAAACGGTGTATAGAGTCTGCATCTGTCAAGGATAACCCTGCTTATAGGAATGCTCTTCTGGATTTTGCAAATGAGTGGAAGAATTTAAGGCCAATTGAACGCAATAAGTTACTTGGAAAACCATTACAGCTTCCTTTGGCTGTCGAATTATGCTACTTAAGTGAAAGTACTAACCACAACAACAAGGTCGGCACACTATGCACTTAACCTCCGTTTTAATGGATATGTATGATCTTTTCATAAAATTTGCCCTTCCCCTCTAATATTGTTTTGCTTCTTGTATATATAATAATGTAACAAAAGTCTGTGTTTGACAGGGACTAATAAATGGTGGAAGCAAACGGCGCATGACTCCTTTAGTGGACATCAGCTATCCCTTACCATCAGATGCTGTTTGGAAAAAGGTTTATCTTAGAAGTGGCCGTGGTAAGAAGGAAAAAGAATACACTCAAGGCTGGAGCCTGAAGGATGAGCCTCTTTGTAAGCTTTGTCAAAAGCAATGCATGTATGTCCCGTACAAATTATGTATTGCTTTAAAATATGCATGTTAGTATACAACTAATAATTACACTTTCAGGGGTAACAATGCCAAGACACCTGAATATTTTGAAGATCTTTTTTGTAACCTTGTCTGCCATCAAGAGTATCGCATGAGAACTAGCAACAGATTCCTCCGTCAGGTTGGAACATTTATCATATTCAAATCAGAATGTATTCGACTAATCTTCATTTGTTGTTTAGATGTCTGTTGCTAGAAAGGTTTCTGTTTAGTTTTTCATGTCTTTGAGCTAGATTTTAAAGAAGTTGAGATGAAATTTTCAGGAACTTTTCCAAATTGAACAAGGTGTGTGCACAAATTGCCAATTGGACTGTCATAAGCTTGTTGTGAATATAAGACCTTTGTCCCTGGAAAGACGACGAGGGTACATTGAAAAAGTAGCACCGAATATTGCAAAGCGGAAGAAGATGTGAGTTTATGATAGTGAAATACCTAAAGTCAATTTTGATATGATGTTAGAAAACAACATTACAGGCTTGTAAATAGACTGACTGTACAGTAGTGTTGATAAACTAGCTTATTTACTGTACACCAACCATCTTCTGAAGCACCCTTCTGAAACACAAGTTGATTATCTGCAGGTTTGAGAAGCTTATCAAAGATCCAATTGAAGGCAATGCCTGGCATGCTGATCACATTGTTCCAGTATATAAAGGCGGAGGTATAATTTCTTTGAAGTCCAATCCAACTTGTTTTTGGAAGAATTGTATTATCATTTTTAATTGTAGTGACCTGTTATTCTCAGAAATGATCATCTTGATACTTGCAACTAAGATTTAGATATGCTCAAAAGAAAGGCTGATAAAAATCGTGATTTATGGGAAACAAGGCTGATAAAAATCCTGATTTATGAGAAACATTCATCTAGTCAACTTGTACCTGTGATGGGGGGTATTACAATGTAAATAAGTATTAAAATAGTAGGGGGCAGCTATTAGAACTTTCATATTTTTTTGTCAAAATGCCGACATTCCTGAAGTTAACTTCCAGAGGCTATTGACTTGAACGTGGGGTAATTTACGATCTAGAAGTTAACTTTCAGATTGATTTTTTCAGGGTGTTAACTTCTGAACCTTTTACTTAGTTTTATCAGGGTATGCTTCTTCTTTACATTTTTAAAAATTATCAATTTACCACATATTTTTCAAAATACGCAAAAATATCATAATATAAATATAAATTAAAGAATATAATTTGTACTTAAATTACAAAATAAAAGATAAAGATTACTTCATTTATAATGTCGTCTTCCTTATCTGTTGATTGTATCCTCCTCCTGCCACTTCCTCTACTTGTAGAAAAGGTTAGATTTTAGAAGTGTTTCAATTTTTTACCTTAATTAATCATTCTATAGGTGAATGCAAACTCGAGAACATGAGAACTCTTTGTGTGGCCTGCCATCACGATGTTACTGCTGTACAATGTGCTGAGCGACGCATTATAAGAGCAAACGCCCGCAAACAACTAAAAGTATTGATGGATACCATGAAAAATAATACGAAGGGTGCTGCTGGTAATAATAATAATGAGGTATGTAATCATTTCTGTTGATGCATAGACACACATTCCCTGATGGTGTAAAGCATTTCAGTCTGCCATATGGACTGGATGACATGTCTGTATAACACTTTGTGTCAAGCATTCGTGCTTTAGGAAGTAATTATATGGTTCATGGTCAACCTAAGAAGCGAAAATTGTGCGTGAGCATAAATTTTATTACATACTCAAGTAAAACCATTAGCAAGAAAGCCTTCAAGAGGTAGACATGCAAATTTGATGACTGTTTATTCACATCACTTTCTGTATAAAATTCAGGACCTAATTCTTCACGGGGTGCAAGAAAGTATGCACGAGGATGATATTTTAGTCCCGGTTCCTGGAAGTGCCTATTCGCTAGCTAACAGCCAAGAAAGTGGAGATGCAGCCTATTAA

Protein sequence

>MS.gene057939.t1

IRRLKEHVLQQLPPKRRQIIRLLLKRSDIVAAKTAVGVLKIDSSENASEDMPLDSLDEHDVGVLKIDASENASEDMPLDSLDEHDVGVLKIDASENASEDIPLDSLDEHDGKLTYQELGIAKLSGFREWLSFHPLIAGSENASKMIIFAHHHKVLDGVQEFICEKGVGFVRIDGHTLPRDRQSAVTSFRSSPEIKIAIIGVLAAGFGLDFSAAQDVVFLELPQSPTVMLQGSSTGANNAVNIYVFCAKDTWDESHWKYLNTSLHRVSSTTDGKYDAVKGLEVERVSFLNPSSKIDRSEEQSASEDASVETQLDRQPSAVKSNETEANQDDESGLVNNISQSANIMVDSASCIDLGQASVLDGNLDADVFYAGDRCSEESLEDNDNIEDKKPTSTTDADDNQPTHPVEAEEHCSHQVNSLRFEVSPYTGRIHLYTCILGKDARPQPRYENFRPEDLELLSPADADEKRCIESASVKDNPAYRNALLDFANEWKNLRPIERNKLLGKPLQLPLAVELCYLSESTNHNNKGLINGGSKRRMTPLVDISYPLPSDAVWKKVYLRSGRGKKEKEYTQGWSLKDEPLCKLCQKQCMGNNAKTPEYFEDLFCNLVCHQEYRMRTSNRFLRQELFQIEQGVCTNCQLDCHKLVVNIRPLSLERRRGYIEKVAPNIAKRKKMFEKLIKDPIEGNAWHADHIVPVYKGGGECKLENMRTLCVACHHDVTAVQCAERRIIRANARKQLKVLMDTMKNNTKGAAGNNNNEDLILHGVQESMHEDDILVPVPGSAYSLANSQESGDAAY