AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058487


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058487.t1 MTR_1g014510 97.742 310 6 1 1 309 1 310 0.0 598
MS.gene058487.t1 MTR_0103s0090 50.000 310 150 3 1 309 1 306 3.15e-105 311
MS.gene058487.t1 MTR_6g007760 49.515 309 154 2 1 309 1 307 9.42e-102 301
MS.gene058487.t1 MTR_6g007743 42.857 308 167 3 4 309 5 305 4.01e-85 260
MS.gene058487.t1 MTR_6g007747 43.894 303 163 3 7 309 8 303 3.97e-84 258
MS.gene058487.t1 MTR_6g007740 42.244 303 166 3 7 307 8 303 3.16e-82 256
MS.gene058487.t1 MTR_6g007757 41.639 305 168 4 7 308 8 305 1.87e-80 248
MS.gene058487.t1 MTR_6g007750 40.584 308 171 5 7 309 8 308 1.74e-73 230
MS.gene058487.t1 MTR_3g090550 40.924 303 172 5 8 309 3 299 1.87e-73 229
MS.gene058487.t1 MTR_1g014790 95.833 120 4 1 88 206 39 158 4.31e-72 221
MS.gene058487.t1 MTR_4g106720 41.639 305 169 6 9 309 9 308 1.54e-70 223
MS.gene058487.t1 MTR_0103s0090 49.083 218 107 2 93 309 1 215 3.54e-70 219
MS.gene058487.t1 MTR_5g034910 41.356 295 169 3 16 309 12 303 2.08e-66 211
MS.gene058487.t1 MTR_5g034980 38.721 297 178 3 14 309 10 303 9.76e-66 210
MS.gene058487.t1 MTR_6g007757 40.304 263 147 4 7 266 8 263 1.68e-64 204
MS.gene058487.t1 MTR_6g007753 39.300 257 150 2 55 309 337 589 1.64e-62 209
MS.gene058487.t1 MTR_6g007753 30.033 303 167 4 7 309 8 265 1.03e-43 158
MS.gene058487.t1 MTR_5g034970 39.502 281 166 3 15 294 11 288 3.42e-62 201
MS.gene058487.t1 MTR_5g034990 38.562 306 172 4 9 309 12 306 7.13e-59 192
MS.gene058487.t1 MTR_5g034930 37.627 295 180 3 16 309 11 302 5.50e-58 190
MS.gene058487.t1 MTR_5g034980 37.705 244 148 3 14 256 10 250 2.99e-48 163
MS.gene058487.t1 MTR_8g041390 28.662 314 217 6 1 309 3 314 3.47e-46 160
MS.gene058487.t1 MTR_1g023180 31.529 314 193 6 15 309 25 335 7.54e-44 154
MS.gene058487.t1 MTR_0096s0100 30.097 309 204 7 6 309 13 314 6.06e-43 151
MS.gene058487.t1 MTR_1g030600 28.664 307 212 6 7 309 14 317 5.31e-42 149
MS.gene058487.t1 MTR_3g072560 29.703 303 205 5 9 309 16 312 1.33e-41 149
MS.gene058487.t1 MTR_3g012420 28.296 311 216 5 4 309 7 315 9.00e-41 146
MS.gene058487.t1 MTR_2g007990 31.788 302 199 6 12 309 16 314 1.85e-40 145
MS.gene058487.t1 MTR_1g068630 32.226 301 195 6 12 309 16 310 2.02e-40 144
MS.gene058487.t1 MTR_3g072530 30.263 304 200 6 12 309 15 312 7.67e-40 143
MS.gene058487.t1 MTR_3g112480 29.936 314 195 5 14 309 23 329 1.21e-39 143
MS.gene058487.t1 MTR_1g070175 30.592 304 203 5 7 309 12 308 1.42e-39 142
MS.gene058487.t1 MTR_1g074120 32.258 310 193 10 7 309 12 311 9.29e-39 140
MS.gene058487.t1 MTR_1g030580 30.619 307 201 5 8 309 13 312 1.07e-38 140
MS.gene058487.t1 MTR_6g081840 31.142 289 193 3 25 309 24 310 1.18e-38 140
MS.gene058487.t1 MTR_6g036450 31.126 302 200 5 12 309 17 314 1.68e-38 139
MS.gene058487.t1 MTR_2g016710 29.766 299 204 3 12 309 9 302 2.42e-38 138
MS.gene058487.t1 MTR_2g016710 29.766 299 204 3 12 309 9 302 5.36e-38 138
MS.gene058487.t1 MTR_5g021160 30.976 297 201 4 15 309 11 305 4.60e-37 135
MS.gene058487.t1 MTR_7g111830 28.571 308 211 5 9 309 5 310 5.52e-37 136
MS.gene058487.t1 MTR_1g073990 34.076 314 187 10 5 309 10 312 3.72e-36 133
MS.gene058487.t1 MTR_1g074160 31.186 295 189 9 22 309 21 308 1.07e-35 132
MS.gene058487.t1 MTR_1g074020 32.979 282 180 6 31 309 33 308 1.24e-35 132
MS.gene058487.t1 MTR_3g095460 28.525 305 213 4 8 309 2 304 1.53e-35 131
MS.gene058487.t1 MTR_7g100050 28.025 314 211 7 3 309 5 310 9.20e-35 130
MS.gene058487.t1 MTR_3g072500 27.832 309 209 6 8 309 17 318 1.01e-34 130
MS.gene058487.t1 MTR_1g074070 30.065 306 205 6 7 309 12 311 1.76e-34 129
MS.gene058487.t1 MTR_4g094360 28.339 307 211 5 8 309 11 313 5.61e-34 126
MS.gene058487.t1 MTR_1g051120 31.833 311 195 9 7 309 12 313 7.74e-34 127
MS.gene058487.t1 MTR_2g102340 30.068 296 201 6 16 309 17 308 8.24e-34 127
MS.gene058487.t1 MTR_1g114210 27.653 311 218 6 1 309 1 306 1.93e-33 125
MS.gene058487.t1 MTR_2g007260 30.000 300 197 5 17 309 24 317 2.94e-33 126
MS.gene058487.t1 MTR_4g094360 28.339 307 211 5 8 309 11 313 3.07e-33 126
MS.gene058487.t1 MTR_1g038560 28.428 299 209 2 12 309 4 298 1.02e-32 124
MS.gene058487.t1 MTR_4g094340 28.339 307 202 6 12 309 10 307 1.17e-32 124
MS.gene058487.t1 MTR_3g095420 26.073 303 218 4 12 309 8 309 1.32e-32 124
MS.gene058487.t1 MTR_1g030400 29.032 279 190 6 37 309 33 309 1.86e-32 124
MS.gene058487.t1 MTR_4g094340 28.339 307 202 6 12 309 28 325 2.01e-32 124
MS.gene058487.t1 MTR_8g006010 27.090 299 216 2 11 309 10 306 2.18e-32 124
MS.gene058487.t1 MTR_3g112480 29.457 258 159 3 70 309 22 274 2.78e-32 122
MS.gene058487.t1 MTR_5g025290 28.846 312 200 7 15 309 15 321 9.19e-32 122
MS.gene058487.t1 MTR_2g007960 28.247 308 207 6 12 309 13 316 1.05e-31 122
MS.gene058487.t1 MTR_5g025290 28.846 312 200 7 15 309 43 349 1.07e-31 122
MS.gene058487.t1 MTR_8g092650 28.247 308 205 5 12 309 6 307 1.79e-31 120
MS.gene058487.t1 MTR_3g072520 26.537 309 214 6 8 309 6 308 2.52e-31 121
MS.gene058487.t1 MTR_5g025370 30.769 312 196 7 15 309 14 322 3.91e-31 120
MS.gene058487.t1 MTR_4g094362 28.146 302 209 5 12 309 15 312 4.05e-31 120
MS.gene058487.t1 MTR_8g072350 29.393 313 199 7 14 309 12 319 4.94e-31 120
MS.gene058487.t1 MTR_5g025340 30.645 310 197 7 15 309 14 320 7.14e-31 119
MS.gene058487.t1 MTR_3g095450 27.063 303 215 4 12 309 6 307 9.05e-31 119
MS.gene058487.t1 MTR_4g094342 27.331 311 203 7 12 309 14 314 9.61e-31 119
MS.gene058487.t1 MTR_5g025400 30.368 326 204 8 1 309 4 323 1.57e-30 119
MS.gene058487.t1 MTR_4g094352 27.778 306 211 4 12 309 13 316 3.30e-30 118
MS.gene058487.t1 MTR_4g129650 29.747 316 203 7 1 309 1 304 4.26e-30 117
MS.gene058487.t1 MTR_2g007970 28.205 312 212 6 4 309 5 310 7.23e-30 117
MS.gene058487.t1 MTR_5g021160 33.645 214 141 1 97 309 9 222 8.29e-30 114
MS.gene058487.t1 MTR_5g021160 31.579 247 165 4 15 259 11 255 1.73e-29 113
MS.gene058487.t1 MTR_2g027030 27.010 311 217 5 4 309 5 310 3.43e-29 115
MS.gene058487.t1 MTR_3g072500 30.909 220 139 5 97 309 2 215 6.92e-29 112
MS.gene058487.t1 MTR_3g095440 27.063 303 215 4 12 309 6 307 7.29e-29 114
MS.gene058487.t1 MTR_4g094340 31.278 227 150 3 87 309 17 241 8.71e-29 112
MS.gene058487.t1 MTR_8g006120 28.667 300 211 3 11 309 10 307 2.51e-28 112
MS.gene058487.t1 MTR_2g065550 26.578 301 216 4 11 309 10 307 3.52e-28 112
MS.gene058487.t1 MTR_5g068790 26.774 310 220 4 4 309 11 317 6.30e-28 111
MS.gene058487.t1 MTR_1g074160 32.099 243 151 9 22 257 21 256 2.19e-27 108
MS.gene058487.t1 MTR_5g069040 26.923 312 219 5 4 309 11 319 2.67e-27 110
MS.gene058487.t1 MTR_5g025330 29.582 311 199 8 15 309 13 319 2.97e-27 111
MS.gene058487.t1 MTR_3g072530 27.645 293 178 10 12 282 15 295 1.24e-26 107
MS.gene058487.t1 MTR_3g072500 27.799 259 173 6 8 259 17 268 8.33e-26 103
MS.gene058487.t1 MTR_5g089390 26.174 298 207 5 15 309 18 305 8.77e-26 105
MS.gene058487.t1 MTR_8g006050 28.464 267 186 4 40 303 23 287 9.36e-26 105
MS.gene058487.t1 MTR_4g094360 27.600 250 174 3 64 309 20 266 2.86e-25 103
MS.gene058487.t1 MTR_8g006090 26.774 310 224 3 1 309 1 308 6.29e-24 99.8
MS.gene058487.t1 MTR_8g006090 26.774 310 224 3 1 309 1 308 1.54e-23 99.4
MS.gene058487.t1 MTR_3g019050 27.243 301 206 7 15 309 22 315 1.91e-23 99.4
MS.gene058487.t1 MTR_3g095440 26.693 251 178 4 12 257 6 255 6.21e-23 95.9
MS.gene058487.t1 MTR_8g092650 27.885 208 137 2 111 309 26 229 1.09e-22 95.5
MS.gene058487.t1 MTR_4g129650 32.512 203 129 3 109 309 1 197 1.39e-22 95.1
MS.gene058487.t1 MTR_2g102340 29.268 246 168 6 16 259 43 284 1.72e-22 95.9
MS.gene058487.t1 MTR_4g100840 27.215 316 210 8 1 305 4 310 7.12e-22 94.7
MS.gene058487.t1 MTR_4g094340 26.848 257 170 6 12 259 10 257 7.90e-21 90.1
MS.gene058487.t1 MTR_4g094340 26.923 260 172 6 12 262 28 278 1.44e-20 89.7
MS.gene058487.t1 MTR_3g112480 27.536 207 128 2 120 309 1 202 2.52e-20 89.0
MS.gene058487.t1 MTR_1g051120 33.333 192 117 6 7 194 12 196 1.58e-19 85.5
MS.gene058487.t1 MTR_5g012650 25.940 266 186 4 50 309 46 306 2.15e-19 87.4
MS.gene058487.t1 MTR_1g051120 33.333 192 117 6 7 194 12 196 3.74e-19 85.5
MS.gene058487.t1 MTR_3g072500 29.534 193 122 6 8 193 17 202 7.35e-19 84.0
MS.gene058487.t1 MTR_8g006090 29.020 255 177 4 11 263 11 263 1.73e-17 81.6
MS.gene058487.t1 MTR_1g052205 28.293 205 122 7 116 309 2 192 2.08e-17 80.5
MS.gene058487.t1 MTR_8g006090 27.442 215 155 1 95 309 15 228 9.69e-17 79.0
MS.gene058487.t1 MTR_4g094342 27.885 208 141 5 12 213 14 218 2.67e-16 77.4
MS.gene058487.t1 MTR_4g094340 27.941 204 129 6 12 206 28 222 1.26e-13 69.3
MS.gene058487.t1 MTR_8g006090 30.460 174 119 2 91 263 11 183 3.33e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058487.t1 AT5G40240 55.128 312 135 3 1 309 9 318 2.66e-116 340
MS.gene058487.t1 AT5G40240 55.128 312 135 3 1 309 9 318 2.66e-116 340
MS.gene058487.t1 AT5G40240 55.128 312 135 3 1 309 23 332 8.72e-116 339
MS.gene058487.t1 AT5G40230 53.115 305 138 4 8 309 17 319 1.61e-108 320
MS.gene058487.t1 AT4G15540 54.248 306 128 2 4 309 9 302 3.34e-100 298
MS.gene058487.t1 AT4G15540 54.248 306 128 2 4 309 9 302 3.34e-100 298
MS.gene058487.t1 AT3G28050 48.387 310 153 4 1 309 1 304 4.89e-97 291
MS.gene058487.t1 AT5G40210 44.481 308 151 4 3 309 4 292 6.09e-84 256
MS.gene058487.t1 AT3G28100 45.277 307 158 5 8 309 10 311 1.18e-71 225
MS.gene058487.t1 AT3G28130 44.918 305 162 5 8 309 9 310 1.56e-68 218
MS.gene058487.t1 AT3G28070 43.322 307 164 5 8 309 13 314 9.02e-66 209
MS.gene058487.t1 AT3G28070 43.038 316 168 6 1 309 4 314 2.54e-65 209
MS.gene058487.t1 AT3G28080 42.345 307 167 5 8 309 10 311 3.94e-64 206
MS.gene058487.t1 AT3G28080 40.391 307 165 6 8 309 10 303 7.82e-57 187
MS.gene058487.t1 AT3G28100 45.703 256 130 4 8 258 10 261 9.24e-57 184
MS.gene058487.t1 AT3G28070 43.439 221 116 4 94 309 6 222 2.88e-54 178
MS.gene058487.t1 AT3G28130 45.662 219 114 4 94 309 8 224 3.05e-52 173
MS.gene058487.t1 AT3G28130 45.662 219 114 4 94 309 8 224 3.05e-52 173
MS.gene058487.t1 AT3G28130 44.664 253 135 4 8 257 9 259 1.12e-51 171
MS.gene058487.t1 AT1G70260 32.154 311 199 6 8 309 8 315 3.13e-48 166
MS.gene058487.t1 AT3G28080 41.284 218 119 4 97 309 9 222 1.07e-47 161
MS.gene058487.t1 AT3G28080 41.284 218 119 4 97 309 9 222 1.07e-47 161
MS.gene058487.t1 AT3G28080 41.284 218 119 4 97 309 9 222 1.07e-47 161
MS.gene058487.t1 AT3G28080 41.284 218 119 4 97 309 9 222 1.07e-47 161
MS.gene058487.t1 AT3G28100 47.573 206 100 3 8 209 10 211 1.34e-46 158
MS.gene058487.t1 AT4G08290 31.788 302 198 5 12 309 13 310 1.32e-45 159
MS.gene058487.t1 AT3G28130 47.059 204 104 3 8 209 9 210 2.19e-44 151
MS.gene058487.t1 AT2G39510 31.000 300 202 5 12 309 8 304 1.86e-42 150
MS.gene058487.t1 AT1G21890 30.312 320 204 5 3 309 2 315 3.17e-42 149
MS.gene058487.t1 AT2G37460 31.210 314 197 6 4 309 7 309 4.35e-42 149
MS.gene058487.t1 AT1G21890 30.312 320 204 5 3 309 2 315 5.34e-42 149
MS.gene058487.t1 AT3G28080 35.948 306 134 5 8 309 10 257 5.93e-42 147
MS.gene058487.t1 AT1G75500 29.703 303 202 5 15 309 23 322 7.16e-42 149
MS.gene058487.t1 AT1G75500 29.703 303 202 5 15 309 23 322 7.16e-42 149
MS.gene058487.t1 AT3G18200 31.987 297 194 5 15 309 38 328 8.77e-42 149
MS.gene058487.t1 AT5G13670 32.792 308 198 7 7 309 3 306 2.26e-41 147
MS.gene058487.t1 AT5G07050 29.870 308 202 6 12 309 18 321 2.42e-41 148
MS.gene058487.t1 AT1G60050 33.227 313 197 6 7 309 8 318 4.62e-41 147
MS.gene058487.t1 AT3G30340 30.164 305 207 4 9 309 5 307 8.88e-41 145
MS.gene058487.t1 AT1G09380 29.508 305 209 4 9 309 5 307 1.49e-40 145
MS.gene058487.t1 AT2G40900 28.205 312 207 5 3 309 2 301 3.43e-38 139
MS.gene058487.t1 AT1G44800 28.525 305 210 5 8 309 7 306 3.27e-37 136
MS.gene058487.t1 AT3G28070 39.153 189 106 4 126 309 1 185 8.64e-37 132
MS.gene058487.t1 AT4G08300 28.146 302 210 4 12 309 11 309 2.03e-36 134
MS.gene058487.t1 AT3G28130 41.176 187 105 4 126 309 1 185 1.08e-35 129
MS.gene058487.t1 AT3G56620 27.632 304 202 5 12 309 11 302 3.45e-35 131
MS.gene058487.t1 AT4G08290 33.333 243 154 5 12 250 13 251 4.06e-35 129
MS.gene058487.t1 AT3G53210 29.054 296 207 3 15 309 13 306 5.44e-35 130
MS.gene058487.t1 AT1G01070 29.582 311 215 4 1 309 5 313 2.23e-34 129
MS.gene058487.t1 AT1G68170 28.435 313 213 7 4 309 3 311 1.06e-33 127
MS.gene058487.t1 AT5G64700 31.818 286 186 7 31 309 27 310 3.69e-33 125
MS.gene058487.t1 AT4G01440 26.710 307 219 5 5 309 3 305 4.48e-33 124
MS.gene058487.t1 AT1G11450 30.000 300 204 6 12 309 16 311 4.97e-33 124
MS.gene058487.t1 AT1G68170 28.990 307 206 7 8 309 2 301 6.31e-33 124
MS.gene058487.t1 AT4G01440 26.710 307 219 5 5 309 3 305 8.72e-33 124
MS.gene058487.t1 AT1G11450 30.000 300 204 6 12 309 16 311 1.44e-32 124
MS.gene058487.t1 AT3G28080 37.566 189 109 4 126 309 1 185 6.49e-32 119
MS.gene058487.t1 AT3G30340 29.020 255 175 4 9 259 5 257 1.51e-31 119
MS.gene058487.t1 AT4G01430 28.912 294 191 7 26 309 23 308 2.35e-31 119
MS.gene058487.t1 AT1G11460 28.667 300 209 5 12 309 16 312 2.64e-31 120
MS.gene058487.t1 AT1G43650 30.743 296 198 5 15 309 10 299 3.66e-31 119
MS.gene058487.t1 AT4G28040 29.773 309 191 8 7 309 6 294 6.31e-31 119
MS.gene058487.t1 AT4G28040 29.773 309 191 8 7 309 6 294 6.31e-31 119
MS.gene058487.t1 AT4G28040 29.773 309 191 8 7 309 6 294 6.31e-31 119
MS.gene058487.t1 AT4G28040 29.773 309 191 8 7 309 6 294 6.31e-31 119
MS.gene058487.t1 AT4G28040 29.773 309 191 8 7 309 6 294 6.31e-31 119
MS.gene058487.t1 AT5G45370 29.801 302 194 7 11 309 19 305 7.42e-31 119
MS.gene058487.t1 AT4G01430 28.912 294 191 7 26 309 23 308 9.58e-31 119
MS.gene058487.t1 AT5G45370 28.616 318 201 8 11 309 19 329 1.91e-30 118
MS.gene058487.t1 AT5G45370 28.616 318 201 8 11 309 19 329 1.91e-30 118
MS.gene058487.t1 AT2G37450 30.225 311 179 6 6 309 3 282 1.08e-29 115
MS.gene058487.t1 AT1G11450 30.712 267 179 6 45 309 5 267 2.30e-29 114
MS.gene058487.t1 AT1G01070 30.992 242 165 2 70 309 25 266 2.72e-29 114
MS.gene058487.t1 AT1G25270 27.273 297 212 4 15 309 6 300 3.28e-29 114
MS.gene058487.t1 AT3G53210 31.624 234 157 3 15 247 13 244 8.21e-29 111
MS.gene058487.t1 AT1G11450 30.739 257 173 5 55 309 7 260 2.30e-28 111
MS.gene058487.t1 AT3G18200 32.178 202 132 2 109 309 1 198 2.58e-28 110
MS.gene058487.t1 AT3G45870 28.896 308 201 6 15 309 15 317 2.29e-27 109
MS.gene058487.t1 AT3G53210 28.099 242 174 0 68 309 8 249 2.97e-27 108
MS.gene058487.t1 AT4G30420 27.597 308 212 5 8 309 5 307 3.27e-27 109
MS.gene058487.t1 AT3G45870 28.896 308 201 6 15 309 15 317 6.46e-27 108
MS.gene058487.t1 AT4G30420 27.907 301 206 5 15 309 2 297 1.57e-26 107
MS.gene058487.t1 AT4G01450 27.972 286 196 5 26 309 24 301 2.79e-26 106
MS.gene058487.t1 AT3G28080 32.258 217 86 4 97 309 9 168 4.67e-26 103
MS.gene058487.t1 AT4G19185 28.704 324 212 7 2 309 10 330 1.29e-25 105
MS.gene058487.t1 AT4G01450 27.817 284 195 5 26 307 24 299 2.95e-25 103
MS.gene058487.t1 AT4G01440 27.451 255 179 5 5 257 3 253 5.06e-25 101
MS.gene058487.t1 AT1G11450 31.818 220 147 3 91 309 2 219 5.92e-25 101
MS.gene058487.t1 AT5G64700 31.197 234 152 7 31 257 27 258 1.07e-23 98.2
MS.gene058487.t1 AT4G01450 28.632 234 157 5 26 257 24 249 1.91e-23 97.4
MS.gene058487.t1 AT2G37450 31.050 219 135 3 98 309 1 210 1.17e-21 92.4
MS.gene058487.t1 AT4G19185 28.750 240 154 4 84 309 16 252 1.95e-21 92.8
MS.gene058487.t1 AT1G43650 31.687 243 159 5 15 256 10 246 2.25e-21 91.7
MS.gene058487.t1 AT4G01440 25.253 198 147 1 112 309 1 197 7.24e-21 90.1
MS.gene058487.t1 AT4G01440 25.253 198 147 1 112 309 1 197 7.24e-21 90.1
MS.gene058487.t1 AT4G01450 31.414 191 121 5 26 214 24 206 1.54e-20 89.0
MS.gene058487.t1 AT5G45370 27.948 229 146 5 97 309 2 227 1.33e-19 87.0
MS.gene058487.t1 AT5G45370 27.948 229 146 5 97 309 2 227 1.33e-19 87.0
MS.gene058487.t1 AT3G45870 31.651 218 132 5 15 219 15 228 3.82e-19 85.9
MS.gene058487.t1 AT3G28060 32.520 123 81 2 188 309 33 154 7.22e-19 82.4
MS.gene058487.t1 AT3G28070 50.000 118 58 1 8 125 13 129 7.84e-18 80.9
MS.gene058487.t1 AT4G24980 25.704 284 143 9 26 309 1 216 4.17e-17 80.1
MS.gene058487.t1 AT5G47470 22.742 299 218 6 15 309 33 322 5.35e-16 78.2
MS.gene058487.t1 AT5G47470 22.742 299 218 6 15 309 61 350 7.50e-16 77.8
MS.gene058487.t1 AT5G47470 22.742 299 218 6 15 309 61 350 7.86e-16 77.8
MS.gene058487.t1 AT4G16620 25.000 272 178 7 51 309 50 308 1.07e-14 74.3
MS.gene058487.t1 AT4G16620 24.887 221 147 4 98 309 1 211 2.90e-12 66.2
MS.gene058487.t1 AT4G16620 24.887 221 147 4 98 309 1 211 2.90e-12 66.2
MS.gene058487.t1 AT4G16620 26.396 197 135 5 51 243 50 240 5.96e-12 65.5
MS.gene058487.t1 AT3G45870 23.810 231 158 4 91 309 18 242 7.73e-12 64.7
MS.gene058487.t1 AT3G45870 23.810 231 158 4 91 309 18 242 7.73e-12 64.7
MS.gene058487.t1 AT3G45870 23.810 231 158 4 91 309 18 242 2.63e-11 63.9
MS.gene058487.t1 AT4G01430 23.864 176 122 3 141 309 1 171 7.53e-11 61.6

Find 74 sgRNAs with CRISPR-Local

Find 159 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTGATGCACTGCATTT+TGG 0.191757 1.4:+7766403 MS.gene058487:CDS
CCTAATAGTTGTTCTTTATA+AGG 0.207517 1.4:+7765558 MS.gene058487:CDS
TCCAATATGGTACATTATTC+AGG 0.222282 1.4:+7765705 MS.gene058487:CDS
ACAGAATCAAATTGGATTCT+TGG 0.236085 1.4:+7765649 MS.gene058487:CDS
CCTTATAAAGAACAACTATT+AGG 0.270894 1.4:-7765558 None:intergenic
GGTTCTACGGTATCAATATT+AGG 0.271179 1.4:+7765532 MS.gene058487:CDS
CCTCAACAACAGAATCAAAT+TGG 0.275934 1.4:+7765641 MS.gene058487:CDS
AGTTTCTTATTGTTCCAATA+TGG 0.297844 1.4:+7765692 MS.gene058487:CDS
ATGGAGATCATTGTTATATC+AGG 0.299829 1.4:-7765959 None:intergenic
GATGGTGAGGGTATGATTAT+TGG 0.303670 1.4:-7765583 None:intergenic
ACTTGGGGACTACATATTAA+AGG 0.320640 1.4:+7766313 MS.gene058487:CDS
CTAATAGTTGTTCTTTATAA+GGG 0.322927 1.4:+7765559 MS.gene058487:CDS
ATCTTCCAAGCATTCAAGTT+TGG 0.339337 1.4:-7765932 None:intergenic
TTAAAGAGTGATATATAAAC+AGG 0.340392 1.4:-7766337 None:intergenic
CTCTCCCCTTCTTTATCAAA+TGG 0.343306 1.4:+7764125 MS.gene058487:CDS
GCTCAGCTCTTTGGATATAA+AGG 0.343826 1.4:+7764423 MS.gene058487:CDS
GTGATTGGAGAATGAATAAT+AGG 0.368778 1.4:-7765619 None:intergenic
TTCTACAGGACTAAGTTGTT+TGG 0.372838 1.4:+7766285 MS.gene058487:CDS
ACCTGAATAATGTACCATAT+TGG 0.374880 1.4:-7765706 None:intergenic
ATAGGTGGTGGTTGTGTTGA+TGG 0.377265 1.4:-7765601 None:intergenic
AGGATGGAGAAGGTAAAATT+AGG 0.378528 1.4:+7765481 MS.gene058487:intron
AGAGTTGTAGCTCAGCTCTT+TGG 0.379055 1.4:+7764414 MS.gene058487:intron
CTTATAAAGAACAACTATTA+GGG 0.392099 1.4:-7765557 None:intergenic
TTCAAAGCAGCTACTCAAAA+GGG 0.408454 1.4:+7764040 MS.gene058487:CDS
GATTCTGTTGTTGAGGTGAT+TGG 0.432000 1.4:-7765634 None:intergenic
ATTCAAAGCAGCTACTCAAA+AGG 0.435610 1.4:+7764039 MS.gene058487:CDS
AGTGGAGACAACAAATGAAT+AGG 0.435890 1.4:-7764086 None:intergenic
TGTAAAAGCAGGTATAAGAT+TGG 0.445087 1.4:-7764484 None:intergenic
AGATCACCATTTGATAAAGA+AGG 0.450262 1.4:-7764131 None:intergenic
AAGCAGTCAAGCAAAGATCT+TGG 0.450311 1.4:+7765510 MS.gene058487:CDS
TAGAACCAAACTTGAATGCT+TGG 0.454876 1.4:+7765927 MS.gene058487:CDS
ATTGCAACCATTGCTGTGAA+TGG 0.457297 1.4:-7763986 None:intergenic
TTTCTTTACCGAGCATATGA+TGG 0.466932 1.4:-7765978 None:intergenic
AATACCACAATAATCTCTGC+TGG 0.471152 1.4:-7765854 None:intergenic
GGTTCTAGTAGTAAGCATAT+TGG 0.475641 1.4:-7765911 None:intergenic
TAAAGAAGGGGAGAGGCAAA+AGG 0.494021 1.4:-7764117 None:intergenic
TGGTGGTTGTGTTGATGGTG+AGG 0.494359 1.4:-7765596 None:intergenic
AAGTTGTTTGGTTCACACTT+GGG 0.495577 1.4:+7766297 MS.gene058487:CDS
AGCAAAGATCTTGGGTTCTA+CGG 0.496585 1.4:+7765519 MS.gene058487:CDS
AGCAGTCAAGCAAAGATCTT+GGG 0.501625 1.4:+7765511 MS.gene058487:CDS
GATCACCATTTGATAAAGAA+GGG 0.505013 1.4:-7764130 None:intergenic
GAGGGAGTGAGAGAGATGGC+TGG 0.508679 1.4:+7763938 None:intergenic
GAATCAAATTGGATTCTTGG+TGG 0.509232 1.4:+7765652 MS.gene058487:CDS
TAAGTTGTTTGGTTCACACT+TGG 0.515322 1.4:+7766296 MS.gene058487:CDS
CCAATTTGATTCTGTTGTTG+AGG 0.516438 1.4:-7765641 None:intergenic
AGGGAGTGAGAGAGATGGCT+GGG 0.523477 1.4:+7763939 None:intergenic
GGTGGTTGTGTTGATGGTGA+GGG 0.534351 1.4:-7765595 None:intergenic
GGCTGGGAGGCATTGTTACA+AGG 0.538462 1.4:+7763955 MS.gene058487:CDS
TTGCAACCATTGCTGTGAAT+GGG 0.538780 1.4:-7763985 None:intergenic
AGTTGTTTGGTTCACACTTG+GGG 0.541777 1.4:+7766298 MS.gene058487:CDS
TGGAGAAGGTAAAATTAGGA+TGG 0.545808 1.4:+7765485 MS.gene058487:CDS
GAAAGAGATGAAGCAAGAGT+AGG 0.546261 1.4:-7764462 None:intergenic
GGCACCTGAAAATGATAGCT+AGG 0.559539 1.4:-7764512 None:intergenic
CATATTTATGAAGGTCAAGA+GGG 0.562057 1.4:+7764237 MS.gene058487:intron
GCTAGGATGAATGTAAAAGC+AGG 0.575660 1.4:-7764495 None:intergenic
AATGATCTCCATCATATGCT+CGG 0.578698 1.4:+7765970 MS.gene058487:CDS
AGGCAAAAGGAGAACAAGAG+TGG 0.584664 1.4:-7764104 None:intergenic
AAGATTAGAGACATGTTCAA+AGG 0.591308 1.4:-7764266 None:intergenic
GCATATTTATGAAGGTCAAG+AGG 0.603216 1.4:+7764236 MS.gene058487:intron
ATTAGAGACATGTTCAAAGG+AGG 0.612665 1.4:-7764263 None:intergenic
TGTGCTCCCATTCACAGCAA+TGG 0.613703 1.4:+7763979 MS.gene058487:CDS
GCAATAGAGTGCACAAACGT+TGG 0.615362 1.4:+7764004 MS.gene058487:CDS
AAGTTCACCCCAAAACTCCA+AGG 0.620017 1.4:-7764301 None:intergenic
GGAGAATGAATAATAGGTGG+TGG 0.626803 1.4:-7765613 None:intergenic
CATTTGATAAAGAAGGGGAG+AGG 0.627315 1.4:-7764124 None:intergenic
TGTTAAATGAAGGATGGAGA+AGG 0.629322 1.4:+7765471 MS.gene058487:intron
ATCACCATTTGATAAAGAAG+GGG 0.630121 1.4:-7764129 None:intergenic
TCAAAGCAGCTACTCAAAAG+GGG 0.631039 1.4:+7764041 MS.gene058487:CDS
GAGTGAGAGAGATGGCTGGG+AGG 0.637450 1.4:+7763942 None:intergenic
GCAGCAATAGCTATTGACAA+AGG 0.666684 1.4:-7766361 None:intergenic
ATTGGAGAATGAATAATAGG+TGG 0.670121 1.4:-7765616 None:intergenic
AAGACACTAGTACTCCACAT+AGG 0.673627 1.4:-7765886 None:intergenic
ATATCCAGCAGAGATTATTG+TGG 0.688546 1.4:+7765850 MS.gene058487:CDS
TAAAGAGTGATATATAAACA+GGG 0.722232 1.4:-7766336 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATAATATTACTTAAAAAA+TGG - chr1.4:7764350-7764369 None:intergenic 10.0%
!!! ATTTTAATGTTTTATTTGTT+CGG - chr1.4:7764874-7764893 None:intergenic 10.0%
!!! TTTTTTTTTCAATATTATGT+AGG - chr1.4:7765338-7765357 None:intergenic 10.0%
!! TGAAATTTGTATTTAGTAAT+GGG + chr1.4:7764659-7764678 MS.gene058487:intron 15.0%
!! TTAAATATGCATATTTATGA+AGG + chr1.4:7764228-7764247 MS.gene058487:intron 15.0%
!!! AAAACATATTAATTTTTAGG+TGG + chr1.4:7764961-7764980 MS.gene058487:intron 15.0%
!!! AAACAGATGAAAATTTTATT+GGG + chr1.4:7764815-7764834 MS.gene058487:intron 15.0%
!!! AAACATATTAATTTTTAGGT+GGG + chr1.4:7764962-7764981 MS.gene058487:intron 15.0%
!!! AAATAATATTCGATTTTATG+AGG + chr1.4:7765263-7765282 MS.gene058487:intron 15.0%
!!! TACACAATATCTATAATTTT+TGG + chr1.4:7766204-7766223 MS.gene058487:intron 15.0%
!!! TTTTAATGTTTTATTTGTTC+GGG - chr1.4:7764873-7764892 None:intergenic 15.0%
!!! TTTTTATTGTGAAACAATAT+TGG + chr1.4:7765447-7765466 MS.gene058487:intron 15.0%
!! AATTATCACTGAAACTAAAT+TGG + chr1.4:7766110-7766129 MS.gene058487:intron 20.0%
!! ATTATAGATATTGTGTACTT+TGG - chr1.4:7766201-7766220 None:intergenic 20.0%
!! CAATAAAATTCTAGGTTTAT+CGG + chr1.4:7765049-7765068 MS.gene058487:intron 20.0%
!! CATTACTAAATACAAATTTC+AGG - chr1.4:7764660-7764679 None:intergenic 20.0%
!! CTAATAGTTGTTCTTTATAA+GGG + chr1.4:7765559-7765578 MS.gene058487:CDS 20.0%
!! CTGAAATTTGTATTTAGTAA+TGG + chr1.4:7764658-7764677 MS.gene058487:intron 20.0%
!! CTTATAAAGAACAACTATTA+GGG - chr1.4:7765560-7765579 None:intergenic 20.0%
!! GAAAAAAAAACTTCAAGATT+AGG + chr1.4:7764993-7765012 MS.gene058487:intron 20.0%
!! TAAAGAGTGATATATAAACA+GGG - chr1.4:7766339-7766358 None:intergenic 20.0%
!! TCAAAAACTCAAATTCTTAA+AGG - chr1.4:7764327-7764346 None:intergenic 20.0%
!! TTAAAGAGTGATATATAAAC+AGG - chr1.4:7766340-7766359 None:intergenic 20.0%
!!! AAAAATAACATTTTTTCGGT+TGG + chr1.4:7765354-7765373 MS.gene058487:intron 20.0%
!!! AAAATAACATTTTTTCGGTT+GGG + chr1.4:7765355-7765374 MS.gene058487:intron 20.0%
!!! AAACCATTTTTGTATCTTTT+AGG - chr1.4:7764784-7764803 None:intergenic 20.0%
!!! AATCTTGAAGTTTTTTTTTC+CGG - chr1.4:7764993-7765012 None:intergenic 20.0%
!!! CAAACAGATGAAAATTTTAT+TGG + chr1.4:7764814-7764833 MS.gene058487:intron 20.0%
!!! CAATAAAATTTTCATCTGTT+TGG - chr1.4:7764816-7764835 None:intergenic 20.0%
!!! CAGATTTCATATTATTGTTT+TGG - chr1.4:7765194-7765213 None:intergenic 20.0%
!!! GATTTTATGAGGTTTTTATT+TGG + chr1.4:7765274-7765293 MS.gene058487:intron 20.0%
!!! TTATTAGCTTGTGATTAATT+TGG + chr1.4:7764730-7764749 MS.gene058487:intron 20.0%
! AACGTAAGCAATAAAATTCT+AGG + chr1.4:7765041-7765060 MS.gene058487:intron 25.0%
! ACTTGATCTGTAAGAAAAAT+GGG - chr1.4:7765145-7765164 None:intergenic 25.0%
! AGTTTCAGTGATAATTCAAA+AGG - chr1.4:7766106-7766125 None:intergenic 25.0%
! AGTTTCTTATTGTTCCAATA+TGG + chr1.4:7765692-7765711 MS.gene058487:CDS 25.0%
! CCTAATAGTTGTTCTTTATA+AGG + chr1.4:7765558-7765577 MS.gene058487:CDS 25.0%
! CCTTATAAAGAACAACTATT+AGG - chr1.4:7765561-7765580 None:intergenic 25.0%
! GTTCCTAAAAGATACAAAAA+TGG + chr1.4:7764778-7764797 MS.gene058487:intron 25.0%
! GTTTCAGTGATAATTCAAAA+GGG - chr1.4:7766105-7766124 None:intergenic 25.0%
! TTCATACAATTTGATGAACA+TGG + chr1.4:7764693-7764712 MS.gene058487:intron 25.0%
!! AAAATTTTCATCTTCATGCA+GGG + chr1.4:7766256-7766275 MS.gene058487:intron 25.0%
!! AAATTTTCATCTGTTTGGAT+TGG - chr1.4:7764811-7764830 None:intergenic 25.0%
!! AATTTTATTGCTTACGTTGT+TGG - chr1.4:7765039-7765058 None:intergenic 25.0%
!! AATTTTCATCTGTTTGGATT+GGG - chr1.4:7764810-7764829 None:intergenic 25.0%
!! AGATGAAAATTTTATTGGGT+CGG + chr1.4:7764819-7764838 MS.gene058487:intron 25.0%
!! CAATATTGGTTGTTAAATGA+AGG + chr1.4:7765461-7765480 MS.gene058487:intron 25.0%
!! TAATCATGTTTTGTCATTGA+CGG - chr1.4:7764932-7764951 None:intergenic 25.0%
!! TAATTTTGTGTGTTTCACTA+TGG + chr1.4:7765412-7765431 MS.gene058487:intron 25.0%
!! TCTTTTAGTGCTATATTTCT+TGG + chr1.4:7766385-7766404 MS.gene058487:CDS 25.0%
!!! AGAAATTGTTGCTTGTTATT+TGG - chr1.4:7766231-7766250 None:intergenic 25.0%
!!! ATCTTGAAGTTTTTTTTTCC+GGG - chr1.4:7764992-7765011 None:intergenic 25.0%
!!! GGATATTTTTCAAATGCTTA+CGG + chr1.4:7764597-7764616 MS.gene058487:intron 25.0%
!!! GGTTTTTATTTGGATTAGTT+TGG + chr1.4:7765284-7765303 MS.gene058487:intron 25.0%
!!! GTATTTTTATACAACCTATG+TGG + chr1.4:7765872-7765891 MS.gene058487:CDS 25.0%
AAAATTCTAGGTTTATCGGA+CGG + chr1.4:7765053-7765072 MS.gene058487:intron 30.0%
AAGATTAGAGACATGTTCAA+AGG - chr1.4:7764269-7764288 None:intergenic 30.0%
AATGCATTCATAGAGAAGAA+TGG - chr1.4:7764184-7764203 None:intergenic 30.0%
ACAGAATCAAATTGGATTCT+TGG + chr1.4:7765649-7765668 MS.gene058487:CDS 30.0%
ACCTGAATAATGTACCATAT+TGG - chr1.4:7765709-7765728 None:intergenic 30.0%
ACTAAATTGGTCAACTCAAA+AGG + chr1.4:7766123-7766142 MS.gene058487:intron 30.0%
AGATCACCATTTGATAAAGA+AGG - chr1.4:7764134-7764153 None:intergenic 30.0%
ATCACCATTTGATAAAGAAG+GGG - chr1.4:7764132-7764151 None:intergenic 30.0%
ATGGAGATCATTGTTATATC+AGG - chr1.4:7765962-7765981 None:intergenic 30.0%
ATTGGAGAATGAATAATAGG+TGG - chr1.4:7765619-7765638 None:intergenic 30.0%
ATTGGTTGTTAAATGAAGGA+TGG + chr1.4:7765465-7765484 MS.gene058487:intron 30.0%
CATATTTATGAAGGTCAAGA+GGG + chr1.4:7764237-7764256 MS.gene058487:intron 30.0%
CTTGATCTGTAAGAAAAATG+GGG - chr1.4:7765144-7765163 None:intergenic 30.0%
GACTTGATCTGTAAGAAAAA+TGG - chr1.4:7765146-7765165 None:intergenic 30.0%
GATCACCATTTGATAAAGAA+GGG - chr1.4:7764133-7764152 None:intergenic 30.0%
GTGATTGGAGAATGAATAAT+AGG - chr1.4:7765622-7765641 None:intergenic 30.0%
TAAGGAAAATTGTGAGCTAA+TGG + chr1.4:7765076-7765095 MS.gene058487:intron 30.0%
TCCAATATGGTACATTATTC+AGG + chr1.4:7765705-7765724 MS.gene058487:CDS 30.0%
TGTAAAAGCAGGTATAAGAT+TGG - chr1.4:7764487-7764506 None:intergenic 30.0%
TTTGATAAATTGTGTGAGTG+AGG + chr1.4:7764390-7764409 MS.gene058487:intron 30.0%
! AATCATGTTTTGTCATTGAC+GGG - chr1.4:7764931-7764950 None:intergenic 30.0%
! AATTTTTCTCCTTGGAGTTT+TGG + chr1.4:7764292-7764311 MS.gene058487:CDS 30.0%
! ATCTTCAGAATTTTTCTCCT+TGG + chr1.4:7764284-7764303 MS.gene058487:CDS 30.0%
! ATTTTTCTCCTTGGAGTTTT+GGG + chr1.4:7764293-7764312 MS.gene058487:CDS 30.0%
! GAAAATTTTCATCTTCATGC+AGG + chr1.4:7766255-7766274 MS.gene058487:intron 30.0%
! GATGAAAATTTTATTGGGTC+GGG + chr1.4:7764820-7764839 MS.gene058487:intron 30.0%
! TAAAATTTTACCTACCCTGA+TGG + chr1.4:7764888-7764907 MS.gene058487:intron 30.0%
!! AATGGACTAAAAAAAGTGAG+CGG + chr1.4:7765094-7765113 MS.gene058487:intron 30.0%
AAGAAATCACTTGCTTGAAC+AGG + chr1.4:7764571-7764590 MS.gene058487:intron 35.0%
AAGAGTAGAGTAAGAGAGAT+AGG - chr1.4:7764536-7764555 None:intergenic 35.0%
AATACCACAATAATCTCTGC+TGG - chr1.4:7765857-7765876 None:intergenic 35.0%
AATGATCTCCATCATATGCT+CGG + chr1.4:7765970-7765989 MS.gene058487:CDS 35.0%
ACTTGGGGACTACATATTAA+AGG + chr1.4:7766313-7766332 MS.gene058487:CDS 35.0%
AGGATGGAGAAGGTAAAATT+AGG + chr1.4:7765481-7765500 MS.gene058487:intron 35.0%
AGTGGAGACAACAAATGAAT+AGG - chr1.4:7764089-7764108 None:intergenic 35.0%
ATAACAGTTGTCTGTTTGCA+AGG - chr1.4:7765824-7765843 None:intergenic 35.0%
ATATCCAGCAGAGATTATTG+TGG + chr1.4:7765850-7765869 MS.gene058487:CDS 35.0%
ATCTGTAAGAAAAATGGGGA+GGG - chr1.4:7765140-7765159 None:intergenic 35.0%
ATTAGAGACATGTTCAAAGG+AGG - chr1.4:7764266-7764285 None:intergenic 35.0%
ATTCAAAGCAGCTACTCAAA+AGG + chr1.4:7764039-7764058 MS.gene058487:CDS 35.0%
CCAATTTGATTCTGTTGTTG+AGG - chr1.4:7765644-7765663 None:intergenic 35.0%
CCTCAACAACAGAATCAAAT+TGG + chr1.4:7765641-7765660 MS.gene058487:CDS 35.0%
GAATCAAATTGGATTCTTGG+TGG + chr1.4:7765652-7765671 MS.gene058487:CDS 35.0%
GCATATTTATGAAGGTCAAG+AGG + chr1.4:7764236-7764255 MS.gene058487:intron 35.0%
GGTTCTACGGTATCAATATT+AGG + chr1.4:7765532-7765551 MS.gene058487:CDS 35.0%
TAGAACCAAACTTGAATGCT+TGG + chr1.4:7765927-7765946 MS.gene058487:CDS 35.0%
TGGAGAAGGTAAAATTAGGA+TGG + chr1.4:7765485-7765504 MS.gene058487:CDS 35.0%
TGTTAAATGAAGGATGGAGA+AGG + chr1.4:7765471-7765490 MS.gene058487:intron 35.0%
TTCAAAGCAGCTACTCAAAA+GGG + chr1.4:7764040-7764059 MS.gene058487:CDS 35.0%
TTCTACAGGACTAAGTTGTT+TGG + chr1.4:7766285-7766304 MS.gene058487:CDS 35.0%
TTTCTTTACCGAGCATATGA+TGG - chr1.4:7765981-7766000 None:intergenic 35.0%
! AAGTTGTTTGGTTCACACTT+GGG + chr1.4:7766297-7766316 MS.gene058487:CDS 35.0%
! ATCTTCCAAGCATTCAAGTT+TGG - chr1.4:7765935-7765954 None:intergenic 35.0%
! GGTTCTAGTAGTAAGCATAT+TGG - chr1.4:7765914-7765933 None:intergenic 35.0%
! TAAGTTGTTTGGTTCACACT+TGG + chr1.4:7766296-7766315 MS.gene058487:CDS 35.0%
! TCATCCTAGCTATCATTTTC+AGG + chr1.4:7764508-7764527 MS.gene058487:CDS 35.0%
! TGTTTTACGACCACTCAAAT+CGG - chr1.4:7765219-7765238 None:intergenic 35.0%
! TTTTTCTCCTTGGAGTTTTG+GGG + chr1.4:7764294-7764313 MS.gene058487:CDS 35.0%
AAGACACTAGTACTCCACAT+AGG - chr1.4:7765889-7765908 None:intergenic 40.0%
AAGCAGTCAAGCAAAGATCT+TGG + chr1.4:7765510-7765529 MS.gene058487:CDS 40.0%
AATCACTTGCTTGAACAGGA+AGG + chr1.4:7764575-7764594 MS.gene058487:intron 40.0%
AGCAAAGATCTTGGGTTCTA+CGG + chr1.4:7765519-7765538 MS.gene058487:CDS 40.0%
AGCAGTCAAGCAAAGATCTT+GGG + chr1.4:7765511-7765530 MS.gene058487:CDS 40.0%
ATCACTTGCTTGAACAGGAA+GGG + chr1.4:7764576-7764595 MS.gene058487:intron 40.0%
ATTGCAACCATTGCTGTGAA+TGG - chr1.4:7763989-7764008 None:intergenic 40.0%
CATTTGATAAAGAAGGGGAG+AGG - chr1.4:7764127-7764146 None:intergenic 40.0%
CTCTCCCCTTCTTTATCAAA+TGG + chr1.4:7764125-7764144 MS.gene058487:CDS 40.0%
GAAAGAGATGAAGCAAGAGT+AGG - chr1.4:7764465-7764484 None:intergenic 40.0%
GATCTGTAAGAAAAATGGGG+AGG - chr1.4:7765141-7765160 None:intergenic 40.0%
GATTCTGTTGTTGAGGTGAT+TGG - chr1.4:7765637-7765656 None:intergenic 40.0%
GCAAACCAACTCAAGAAACA+TGG + chr1.4:7765168-7765187 MS.gene058487:intron 40.0%
GCAGCAATAGCTATTGACAA+AGG - chr1.4:7766364-7766383 None:intergenic 40.0%
GCTAGGATGAATGTAAAAGC+AGG - chr1.4:7764498-7764517 None:intergenic 40.0%
GCTCAGCTCTTTGGATATAA+AGG + chr1.4:7764423-7764442 MS.gene058487:CDS 40.0%
GGAGAATGAATAATAGGTGG+TGG - chr1.4:7765616-7765635 None:intergenic 40.0%
TCAAAGCAGCTACTCAAAAG+GGG + chr1.4:7764041-7764060 MS.gene058487:CDS 40.0%
TTGCAACCATTGCTGTGAAT+GGG - chr1.4:7763988-7764007 None:intergenic 40.0%
TTTGGCCATGTTTCTTGAGT+TGG - chr1.4:7765176-7765195 None:intergenic 40.0%
! AGTTGTTTGGTTCACACTTG+GGG + chr1.4:7766298-7766317 MS.gene058487:CDS 40.0%
! ATGCAGGGATTCTTTTCTAC+AGG + chr1.4:7766271-7766290 MS.gene058487:intron 40.0%
! GATGGTGAGGGTATGATTAT+TGG - chr1.4:7765586-7765605 None:intergenic 40.0%
!!! AATTTTTAGGTGGGTTGACC+CGG + chr1.4:7764971-7764990 MS.gene058487:intron 40.0%
AAGTTCACCCCAAAACTCCA+AGG - chr1.4:7764304-7764323 None:intergenic 45.0%
AGAGTTGTAGCTCAGCTCTT+TGG + chr1.4:7764414-7764433 MS.gene058487:intron 45.0%
AGGCAAAAGGAGAACAAGAG+TGG - chr1.4:7764107-7764126 None:intergenic 45.0%
ATTGGGTCGGGTAATGAGTA+TGG + chr1.4:7764832-7764851 MS.gene058487:intron 45.0%
GCAATAGAGTGCACAAACGT+TGG + chr1.4:7764004-7764023 MS.gene058487:CDS 45.0%
GGCACCTGAAAATGATAGCT+AGG - chr1.4:7764515-7764534 None:intergenic 45.0%
TAAAGAAGGGGAGAGGCAAA+AGG - chr1.4:7764120-7764139 None:intergenic 45.0%
TCTAGGTTTATCGGACGGTA+AGG + chr1.4:7765058-7765077 MS.gene058487:intron 45.0%
! ATAGGTGGTGGTTGTGTTGA+TGG - chr1.4:7765604-7765623 None:intergenic 45.0%
! GAAATCTGCTCCGATTTGAG+TGG + chr1.4:7765206-7765225 MS.gene058487:intron 45.0%
!! TACCTACCCTGATGGATTGA+CGG + chr1.4:7764896-7764915 MS.gene058487:intron 45.0%
!!! CTTGGTGATGCACTGCATTT+TGG + chr1.4:7766403-7766422 MS.gene058487:CDS 45.0%
!!! AAAAAAAAATAACATTTTTT+CGG + chr1.4:7765350-7765369 MS.gene058487:intron 5.0%
!!! AATAAAACATATTAATTTTT+AGG + chr1.4:7764958-7764977 MS.gene058487:intron 5.0%
AACCAGTCCGTCAATCCATC+AGG - chr1.4:7764906-7764925 None:intergenic 50.0%
ACCAGTCCGTCAATCCATCA+GGG - chr1.4:7764905-7764924 None:intergenic 50.0%
TGTGCTCCCATTCACAGCAA+TGG + chr1.4:7763979-7763998 MS.gene058487:CDS 50.0%
!! GGTGGTTGTGTTGATGGTGA+GGG - chr1.4:7765598-7765617 None:intergenic 50.0%
!! TGGTGGTTGTGTTGATGGTG+AGG - chr1.4:7765599-7765618 None:intergenic 50.0%
GTCCGTCAATCCATCAGGGT+AGG - chr1.4:7764901-7764920 None:intergenic 55.0%
!! ACCCTGATGGATTGACGGAC+TGG + chr1.4:7764901-7764920 MS.gene058487:intron 55.0%
!! GGCTGGGAGGCATTGTTACA+AGG + chr1.4:7763955-7763974 MS.gene058487:CDS 55.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 7763953 7766428 7763953 ID=MS.gene058487
chr1.4 mRNA 7763953 7766428 7763953 ID=MS.gene058487.t1;Parent=MS.gene058487
chr1.4 exon 7763953 7764146 7763953 ID=MS.gene058487.t1.exon1;Parent=MS.gene058487.t1
chr1.4 CDS 7763953 7764146 7763953 ID=cds.MS.gene058487.t1;Parent=MS.gene058487.t1
chr1.4 exon 7764250 7764315 7764250 ID=MS.gene058487.t1.exon2;Parent=MS.gene058487.t1
chr1.4 CDS 7764250 7764315 7764250 ID=cds.MS.gene058487.t1;Parent=MS.gene058487.t1
chr1.4 exon 7764416 7764529 7764416 ID=MS.gene058487.t1.exon3;Parent=MS.gene058487.t1
chr1.4 CDS 7764416 7764529 7764416 ID=cds.MS.gene058487.t1;Parent=MS.gene058487.t1
chr1.4 exon 7765483 7765726 7765483 ID=MS.gene058487.t1.exon4;Parent=MS.gene058487.t1
chr1.4 CDS 7765483 7765726 7765483 ID=cds.MS.gene058487.t1;Parent=MS.gene058487.t1
chr1.4 exon 7765833 7765991 7765833 ID=MS.gene058487.t1.exon5;Parent=MS.gene058487.t1
chr1.4 CDS 7765833 7765991 7765833 ID=cds.MS.gene058487.t1;Parent=MS.gene058487.t1
chr1.4 exon 7766277 7766428 7766277 ID=MS.gene058487.t1.exon6;Parent=MS.gene058487.t1
chr1.4 CDS 7766277 7766428 7766277 ID=cds.MS.gene058487.t1;Parent=MS.gene058487.t1
Gene Sequence

>MS.gene058487

ATGGCTGGGAGGCATTGTTACAAGGATGTGCTCCCATTCACAGCAATGGTTGCAATAGAGTGCACAAACGTTGGTGTCAGTGTTCTATTCAAAGCAGCTACTCAAAAGGGGTTGAGTTATTATGTCTTCATTGCCTATTCATTTGTTGTCTCCACTCTTGTTCTCCTTTTGCCTCTCCCCTTCTTTATCAAATGGTGATCTCTTTTTACATATTTATTAGTAACTGAACCATTCTTCTCTATGAATGCATTTTTCATTTTTTTTCTACTCACAACTTAAATATGCATATTTATGAAGGTCAAGAGGGCTTCCTCCTTTGAACATGTCTCTAATCTTCAGAATTTTTCTCCTTGGAGTTTTGGGGTGAACTTCCTTTAAGAATTTGAGTTTTTGACCATTTTTTAAGTAATATTATTCATGATCTTGATTTTGTTTAATTTGATAAATTGTGTGAGTGAGGCAGAGTTGTAGCTCAGCTCTTTGGATATAAAGGACTTGAATACACAACACCTACTCTTGCTTCATCTCTTTCCAATCTTATACCTGCTTTTACATTCATCCTAGCTATCATTTTCAGGTGCCTATCTCTCTTACTCTACTCTTGAAAACTAGATATGAAAGAAATCACTTGCTTGAACAGGAAGGGATATTTTTCAAATGCTTACGGTTCAATTTCAATAATATATATGATGTTTGTCAACATGCCTGAAATTTGTATTTAGTAATGGGTTAATACATGATTCATACAATTTGATGAACATGGTGAAGTTTTGCAAATTATTAGCTTGTGATTAATTTGGCATTTAAACATTTCTTGCAAATTGTGTTCCTAAAAGATACAAAAATGGTTTTGACCCAATCCAAACAGATGAAAATTTTATTGGGTCGGGTAATGAGTATGGTCAAAATCAACTCAACCCGAACAAATAAAACATTAAAATTTTACCTACCCTGATGGATTGACGGACTGGTTGACCCGTCAATGACAAAACATGATTAAATACAAATAAAACATATTAATTTTTAGGTGGGTTGACCCGGAAAAAAAAACTTCAAGATTAGGCTAATAAAATTCAACGTTATCCAACAACGTAAGCAATAAAATTCTAGGTTTATCGGACGGTAAGGAAAATTGTGAGCTAATGGACTAAAAAAAGTGAGCGGTAAAAAAGAACTAAAAATAACCCTCCCCATTTTTCTTACAGATCAAGTCTAGCAAACCAACTCAAGAAACATGGCCAAAACAATAATATGAAATCTGCTCCGATTTGAGTGGTCGTAAAACATGAAAATCTCATTCTCAAAGCATCAAATAATATTCGATTTTATGAGGTTTTTATTTGGATTAGTTTGGATGTGAACATCTATAGTATGATTTTCATCCTACATAATATTGAAAAAAAAAATAACATTTTTTCGGTTGGGCATTTTCTTTAAAATCATAAAAATTAGACTATTTTAATTTTGTGTGTTTCACTATGGTTACTTGCTATGTTTTTATTGTGAAACAATATTGGTTGTTAAATGAAGGATGGAGAAGGTAAAATTAGGATGGAAAAGCAGTCAAGCAAAGATCTTGGGTTCTACGGTATCAATATTAGGTGCCCTAATAGTTGTTCTTTATAAGGGTCCAATAATCATACCCTCACCATCAACACAACCACCACCTATTATTCATTCTCCAATCACCTCAACAACAGAATCAAATTGGATTCTTGGTGGATCTCTACTTGTTATTGAGTTTCTTATTGTTCCAATATGGTACATTATTCAGGTATATTGAATTCACTAAAAAGCTCTAAACAATGATTTGAAGCACATTGTGAATTTTCGATTTTTCATGTAAATTACTAACATAAAATTTTGTTCCTTGCAAACAGACAACTGTTATAAAACAATATCCAGCAGAGATTATTGTGGTATTTTTATACAACCTATGTGGAGTACTAGTGTCTTTACCAATATGCTTACTACTAGAACCAAACTTGAATGCTTGGAAGATAAATCCTGATATAACAATGATCTCCATCATATGCTCGGTAAAGAAATGAATTATCTCAATTTGTAGATTTTTTTTTTAATTTAGTTTATGAAATTTATGAATTTAAAAAATTATTTATAATTTGTGAAATATTTTGATCATATTAGTCCCTTTTGAATTATCACTGAAACTAAATTGGTCAACTCAAAAGGATTAACTTAATATAATATTTTCAATTTCTATTTTATTTAAATTTTAGATACACCAAAGTACACAATATCTATAATTTTTGGACCAAATAACAAGCAACAATTTCTAGCTGAAAATTTTCATCTTCATGCAGGGATTCTTTTCTACAGGACTAAGTTGTTTGGTTCACACTTGGGGACTACATATTAAAGGCCCTGTTTATATATCACTCTTTAAGCCTTTGTCAATAGCTATTGCTGCATCTTTTAGTGCTATATTTCTTGGTGATGCACTGCATTTTGGAAC

Protein sequence

>MS.gene058487.t1

MAGRHCYKDVLPFTAMVAIECTNVGVSVLFKAATQKGLSYYVFIAYSFVVSTLVLLLPLPFFIKWSRGLPPLNMSLIFRIFLLGVLGVVAQLFGYKGLEYTTPTLASSLSNLIPAFTFILAIIFRMEKVKLGWKSSQAKILGSTVSILGALIVVLYKGPIIIPSPSTQPPPIIHSPITSTTESNWILGGSLLVIEFLIVPIWYIIQTTVIKQYPAEIIVVFLYNLCGVLVSLPICLLLEPNLNAWKINPDITMISIICSGFFSTGLSCLVHTWGLHIKGPVYISLFKPLSIAIAASFSAIFLGDALHFG