Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058487.t1 | KEH39875.1 | 97.7 | 310 | 6 | 1 | 1 | 309 | 1 | 310 | 6.10E-162 | 580.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058487.t1 | Q9FL08 | 55.1 | 312 | 135 | 3 | 1 | 309 | 9 | 318 | 2.9e-88 | 326.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058487.t1 | A0A072VP39 | 97.7 | 310 | 6 | 1 | 1 | 309 | 1 | 310 | 4.4e-162 | 580.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051484 | MS.gene058487 | 0.978845 | 1.10E-146 | -1.69E-46 |
MS.gene058487 | MS.gene33118 | 0.943801 | 6.24E-103 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058487.t1 | MTR_1g014510 | 97.742 | 310 | 6 | 1 | 1 | 309 | 1 | 310 | 0.0 | 598 |
MS.gene058487.t1 | MTR_0103s0090 | 50.000 | 310 | 150 | 3 | 1 | 309 | 1 | 306 | 3.15e-105 | 311 |
MS.gene058487.t1 | MTR_6g007760 | 49.515 | 309 | 154 | 2 | 1 | 309 | 1 | 307 | 9.42e-102 | 301 |
MS.gene058487.t1 | MTR_6g007743 | 42.857 | 308 | 167 | 3 | 4 | 309 | 5 | 305 | 4.01e-85 | 260 |
MS.gene058487.t1 | MTR_6g007747 | 43.894 | 303 | 163 | 3 | 7 | 309 | 8 | 303 | 3.97e-84 | 258 |
MS.gene058487.t1 | MTR_6g007740 | 42.244 | 303 | 166 | 3 | 7 | 307 | 8 | 303 | 3.16e-82 | 256 |
MS.gene058487.t1 | MTR_6g007757 | 41.639 | 305 | 168 | 4 | 7 | 308 | 8 | 305 | 1.87e-80 | 248 |
MS.gene058487.t1 | MTR_6g007750 | 40.584 | 308 | 171 | 5 | 7 | 309 | 8 | 308 | 1.74e-73 | 230 |
MS.gene058487.t1 | MTR_3g090550 | 40.924 | 303 | 172 | 5 | 8 | 309 | 3 | 299 | 1.87e-73 | 229 |
MS.gene058487.t1 | MTR_1g014790 | 95.833 | 120 | 4 | 1 | 88 | 206 | 39 | 158 | 4.31e-72 | 221 |
MS.gene058487.t1 | MTR_4g106720 | 41.639 | 305 | 169 | 6 | 9 | 309 | 9 | 308 | 1.54e-70 | 223 |
MS.gene058487.t1 | MTR_0103s0090 | 49.083 | 218 | 107 | 2 | 93 | 309 | 1 | 215 | 3.54e-70 | 219 |
MS.gene058487.t1 | MTR_5g034910 | 41.356 | 295 | 169 | 3 | 16 | 309 | 12 | 303 | 2.08e-66 | 211 |
MS.gene058487.t1 | MTR_5g034980 | 38.721 | 297 | 178 | 3 | 14 | 309 | 10 | 303 | 9.76e-66 | 210 |
MS.gene058487.t1 | MTR_6g007757 | 40.304 | 263 | 147 | 4 | 7 | 266 | 8 | 263 | 1.68e-64 | 204 |
MS.gene058487.t1 | MTR_6g007753 | 39.300 | 257 | 150 | 2 | 55 | 309 | 337 | 589 | 1.64e-62 | 209 |
MS.gene058487.t1 | MTR_6g007753 | 30.033 | 303 | 167 | 4 | 7 | 309 | 8 | 265 | 1.03e-43 | 158 |
MS.gene058487.t1 | MTR_5g034970 | 39.502 | 281 | 166 | 3 | 15 | 294 | 11 | 288 | 3.42e-62 | 201 |
MS.gene058487.t1 | MTR_5g034990 | 38.562 | 306 | 172 | 4 | 9 | 309 | 12 | 306 | 7.13e-59 | 192 |
MS.gene058487.t1 | MTR_5g034930 | 37.627 | 295 | 180 | 3 | 16 | 309 | 11 | 302 | 5.50e-58 | 190 |
MS.gene058487.t1 | MTR_5g034980 | 37.705 | 244 | 148 | 3 | 14 | 256 | 10 | 250 | 2.99e-48 | 163 |
MS.gene058487.t1 | MTR_8g041390 | 28.662 | 314 | 217 | 6 | 1 | 309 | 3 | 314 | 3.47e-46 | 160 |
MS.gene058487.t1 | MTR_1g023180 | 31.529 | 314 | 193 | 6 | 15 | 309 | 25 | 335 | 7.54e-44 | 154 |
MS.gene058487.t1 | MTR_0096s0100 | 30.097 | 309 | 204 | 7 | 6 | 309 | 13 | 314 | 6.06e-43 | 151 |
MS.gene058487.t1 | MTR_1g030600 | 28.664 | 307 | 212 | 6 | 7 | 309 | 14 | 317 | 5.31e-42 | 149 |
MS.gene058487.t1 | MTR_3g072560 | 29.703 | 303 | 205 | 5 | 9 | 309 | 16 | 312 | 1.33e-41 | 149 |
MS.gene058487.t1 | MTR_3g012420 | 28.296 | 311 | 216 | 5 | 4 | 309 | 7 | 315 | 9.00e-41 | 146 |
MS.gene058487.t1 | MTR_2g007990 | 31.788 | 302 | 199 | 6 | 12 | 309 | 16 | 314 | 1.85e-40 | 145 |
MS.gene058487.t1 | MTR_1g068630 | 32.226 | 301 | 195 | 6 | 12 | 309 | 16 | 310 | 2.02e-40 | 144 |
MS.gene058487.t1 | MTR_3g072530 | 30.263 | 304 | 200 | 6 | 12 | 309 | 15 | 312 | 7.67e-40 | 143 |
MS.gene058487.t1 | MTR_3g112480 | 29.936 | 314 | 195 | 5 | 14 | 309 | 23 | 329 | 1.21e-39 | 143 |
MS.gene058487.t1 | MTR_1g070175 | 30.592 | 304 | 203 | 5 | 7 | 309 | 12 | 308 | 1.42e-39 | 142 |
MS.gene058487.t1 | MTR_1g074120 | 32.258 | 310 | 193 | 10 | 7 | 309 | 12 | 311 | 9.29e-39 | 140 |
MS.gene058487.t1 | MTR_1g030580 | 30.619 | 307 | 201 | 5 | 8 | 309 | 13 | 312 | 1.07e-38 | 140 |
MS.gene058487.t1 | MTR_6g081840 | 31.142 | 289 | 193 | 3 | 25 | 309 | 24 | 310 | 1.18e-38 | 140 |
MS.gene058487.t1 | MTR_6g036450 | 31.126 | 302 | 200 | 5 | 12 | 309 | 17 | 314 | 1.68e-38 | 139 |
MS.gene058487.t1 | MTR_2g016710 | 29.766 | 299 | 204 | 3 | 12 | 309 | 9 | 302 | 2.42e-38 | 138 |
MS.gene058487.t1 | MTR_2g016710 | 29.766 | 299 | 204 | 3 | 12 | 309 | 9 | 302 | 5.36e-38 | 138 |
MS.gene058487.t1 | MTR_5g021160 | 30.976 | 297 | 201 | 4 | 15 | 309 | 11 | 305 | 4.60e-37 | 135 |
MS.gene058487.t1 | MTR_7g111830 | 28.571 | 308 | 211 | 5 | 9 | 309 | 5 | 310 | 5.52e-37 | 136 |
MS.gene058487.t1 | MTR_1g073990 | 34.076 | 314 | 187 | 10 | 5 | 309 | 10 | 312 | 3.72e-36 | 133 |
MS.gene058487.t1 | MTR_1g074160 | 31.186 | 295 | 189 | 9 | 22 | 309 | 21 | 308 | 1.07e-35 | 132 |
MS.gene058487.t1 | MTR_1g074020 | 32.979 | 282 | 180 | 6 | 31 | 309 | 33 | 308 | 1.24e-35 | 132 |
MS.gene058487.t1 | MTR_3g095460 | 28.525 | 305 | 213 | 4 | 8 | 309 | 2 | 304 | 1.53e-35 | 131 |
MS.gene058487.t1 | MTR_7g100050 | 28.025 | 314 | 211 | 7 | 3 | 309 | 5 | 310 | 9.20e-35 | 130 |
MS.gene058487.t1 | MTR_3g072500 | 27.832 | 309 | 209 | 6 | 8 | 309 | 17 | 318 | 1.01e-34 | 130 |
MS.gene058487.t1 | MTR_1g074070 | 30.065 | 306 | 205 | 6 | 7 | 309 | 12 | 311 | 1.76e-34 | 129 |
MS.gene058487.t1 | MTR_4g094360 | 28.339 | 307 | 211 | 5 | 8 | 309 | 11 | 313 | 5.61e-34 | 126 |
MS.gene058487.t1 | MTR_1g051120 | 31.833 | 311 | 195 | 9 | 7 | 309 | 12 | 313 | 7.74e-34 | 127 |
MS.gene058487.t1 | MTR_2g102340 | 30.068 | 296 | 201 | 6 | 16 | 309 | 17 | 308 | 8.24e-34 | 127 |
MS.gene058487.t1 | MTR_1g114210 | 27.653 | 311 | 218 | 6 | 1 | 309 | 1 | 306 | 1.93e-33 | 125 |
MS.gene058487.t1 | MTR_2g007260 | 30.000 | 300 | 197 | 5 | 17 | 309 | 24 | 317 | 2.94e-33 | 126 |
MS.gene058487.t1 | MTR_4g094360 | 28.339 | 307 | 211 | 5 | 8 | 309 | 11 | 313 | 3.07e-33 | 126 |
MS.gene058487.t1 | MTR_1g038560 | 28.428 | 299 | 209 | 2 | 12 | 309 | 4 | 298 | 1.02e-32 | 124 |
MS.gene058487.t1 | MTR_4g094340 | 28.339 | 307 | 202 | 6 | 12 | 309 | 10 | 307 | 1.17e-32 | 124 |
MS.gene058487.t1 | MTR_3g095420 | 26.073 | 303 | 218 | 4 | 12 | 309 | 8 | 309 | 1.32e-32 | 124 |
MS.gene058487.t1 | MTR_1g030400 | 29.032 | 279 | 190 | 6 | 37 | 309 | 33 | 309 | 1.86e-32 | 124 |
MS.gene058487.t1 | MTR_4g094340 | 28.339 | 307 | 202 | 6 | 12 | 309 | 28 | 325 | 2.01e-32 | 124 |
MS.gene058487.t1 | MTR_8g006010 | 27.090 | 299 | 216 | 2 | 11 | 309 | 10 | 306 | 2.18e-32 | 124 |
MS.gene058487.t1 | MTR_3g112480 | 29.457 | 258 | 159 | 3 | 70 | 309 | 22 | 274 | 2.78e-32 | 122 |
MS.gene058487.t1 | MTR_5g025290 | 28.846 | 312 | 200 | 7 | 15 | 309 | 15 | 321 | 9.19e-32 | 122 |
MS.gene058487.t1 | MTR_2g007960 | 28.247 | 308 | 207 | 6 | 12 | 309 | 13 | 316 | 1.05e-31 | 122 |
MS.gene058487.t1 | MTR_5g025290 | 28.846 | 312 | 200 | 7 | 15 | 309 | 43 | 349 | 1.07e-31 | 122 |
MS.gene058487.t1 | MTR_8g092650 | 28.247 | 308 | 205 | 5 | 12 | 309 | 6 | 307 | 1.79e-31 | 120 |
MS.gene058487.t1 | MTR_3g072520 | 26.537 | 309 | 214 | 6 | 8 | 309 | 6 | 308 | 2.52e-31 | 121 |
MS.gene058487.t1 | MTR_5g025370 | 30.769 | 312 | 196 | 7 | 15 | 309 | 14 | 322 | 3.91e-31 | 120 |
MS.gene058487.t1 | MTR_4g094362 | 28.146 | 302 | 209 | 5 | 12 | 309 | 15 | 312 | 4.05e-31 | 120 |
MS.gene058487.t1 | MTR_8g072350 | 29.393 | 313 | 199 | 7 | 14 | 309 | 12 | 319 | 4.94e-31 | 120 |
MS.gene058487.t1 | MTR_5g025340 | 30.645 | 310 | 197 | 7 | 15 | 309 | 14 | 320 | 7.14e-31 | 119 |
MS.gene058487.t1 | MTR_3g095450 | 27.063 | 303 | 215 | 4 | 12 | 309 | 6 | 307 | 9.05e-31 | 119 |
MS.gene058487.t1 | MTR_4g094342 | 27.331 | 311 | 203 | 7 | 12 | 309 | 14 | 314 | 9.61e-31 | 119 |
MS.gene058487.t1 | MTR_5g025400 | 30.368 | 326 | 204 | 8 | 1 | 309 | 4 | 323 | 1.57e-30 | 119 |
MS.gene058487.t1 | MTR_4g094352 | 27.778 | 306 | 211 | 4 | 12 | 309 | 13 | 316 | 3.30e-30 | 118 |
MS.gene058487.t1 | MTR_4g129650 | 29.747 | 316 | 203 | 7 | 1 | 309 | 1 | 304 | 4.26e-30 | 117 |
MS.gene058487.t1 | MTR_2g007970 | 28.205 | 312 | 212 | 6 | 4 | 309 | 5 | 310 | 7.23e-30 | 117 |
MS.gene058487.t1 | MTR_5g021160 | 33.645 | 214 | 141 | 1 | 97 | 309 | 9 | 222 | 8.29e-30 | 114 |
MS.gene058487.t1 | MTR_5g021160 | 31.579 | 247 | 165 | 4 | 15 | 259 | 11 | 255 | 1.73e-29 | 113 |
MS.gene058487.t1 | MTR_2g027030 | 27.010 | 311 | 217 | 5 | 4 | 309 | 5 | 310 | 3.43e-29 | 115 |
MS.gene058487.t1 | MTR_3g072500 | 30.909 | 220 | 139 | 5 | 97 | 309 | 2 | 215 | 6.92e-29 | 112 |
MS.gene058487.t1 | MTR_3g095440 | 27.063 | 303 | 215 | 4 | 12 | 309 | 6 | 307 | 7.29e-29 | 114 |
MS.gene058487.t1 | MTR_4g094340 | 31.278 | 227 | 150 | 3 | 87 | 309 | 17 | 241 | 8.71e-29 | 112 |
MS.gene058487.t1 | MTR_8g006120 | 28.667 | 300 | 211 | 3 | 11 | 309 | 10 | 307 | 2.51e-28 | 112 |
MS.gene058487.t1 | MTR_2g065550 | 26.578 | 301 | 216 | 4 | 11 | 309 | 10 | 307 | 3.52e-28 | 112 |
MS.gene058487.t1 | MTR_5g068790 | 26.774 | 310 | 220 | 4 | 4 | 309 | 11 | 317 | 6.30e-28 | 111 |
MS.gene058487.t1 | MTR_1g074160 | 32.099 | 243 | 151 | 9 | 22 | 257 | 21 | 256 | 2.19e-27 | 108 |
MS.gene058487.t1 | MTR_5g069040 | 26.923 | 312 | 219 | 5 | 4 | 309 | 11 | 319 | 2.67e-27 | 110 |
MS.gene058487.t1 | MTR_5g025330 | 29.582 | 311 | 199 | 8 | 15 | 309 | 13 | 319 | 2.97e-27 | 111 |
MS.gene058487.t1 | MTR_3g072530 | 27.645 | 293 | 178 | 10 | 12 | 282 | 15 | 295 | 1.24e-26 | 107 |
MS.gene058487.t1 | MTR_3g072500 | 27.799 | 259 | 173 | 6 | 8 | 259 | 17 | 268 | 8.33e-26 | 103 |
MS.gene058487.t1 | MTR_5g089390 | 26.174 | 298 | 207 | 5 | 15 | 309 | 18 | 305 | 8.77e-26 | 105 |
MS.gene058487.t1 | MTR_8g006050 | 28.464 | 267 | 186 | 4 | 40 | 303 | 23 | 287 | 9.36e-26 | 105 |
MS.gene058487.t1 | MTR_4g094360 | 27.600 | 250 | 174 | 3 | 64 | 309 | 20 | 266 | 2.86e-25 | 103 |
MS.gene058487.t1 | MTR_8g006090 | 26.774 | 310 | 224 | 3 | 1 | 309 | 1 | 308 | 6.29e-24 | 99.8 |
MS.gene058487.t1 | MTR_8g006090 | 26.774 | 310 | 224 | 3 | 1 | 309 | 1 | 308 | 1.54e-23 | 99.4 |
MS.gene058487.t1 | MTR_3g019050 | 27.243 | 301 | 206 | 7 | 15 | 309 | 22 | 315 | 1.91e-23 | 99.4 |
MS.gene058487.t1 | MTR_3g095440 | 26.693 | 251 | 178 | 4 | 12 | 257 | 6 | 255 | 6.21e-23 | 95.9 |
MS.gene058487.t1 | MTR_8g092650 | 27.885 | 208 | 137 | 2 | 111 | 309 | 26 | 229 | 1.09e-22 | 95.5 |
MS.gene058487.t1 | MTR_4g129650 | 32.512 | 203 | 129 | 3 | 109 | 309 | 1 | 197 | 1.39e-22 | 95.1 |
MS.gene058487.t1 | MTR_2g102340 | 29.268 | 246 | 168 | 6 | 16 | 259 | 43 | 284 | 1.72e-22 | 95.9 |
MS.gene058487.t1 | MTR_4g100840 | 27.215 | 316 | 210 | 8 | 1 | 305 | 4 | 310 | 7.12e-22 | 94.7 |
MS.gene058487.t1 | MTR_4g094340 | 26.848 | 257 | 170 | 6 | 12 | 259 | 10 | 257 | 7.90e-21 | 90.1 |
MS.gene058487.t1 | MTR_4g094340 | 26.923 | 260 | 172 | 6 | 12 | 262 | 28 | 278 | 1.44e-20 | 89.7 |
MS.gene058487.t1 | MTR_3g112480 | 27.536 | 207 | 128 | 2 | 120 | 309 | 1 | 202 | 2.52e-20 | 89.0 |
MS.gene058487.t1 | MTR_1g051120 | 33.333 | 192 | 117 | 6 | 7 | 194 | 12 | 196 | 1.58e-19 | 85.5 |
MS.gene058487.t1 | MTR_5g012650 | 25.940 | 266 | 186 | 4 | 50 | 309 | 46 | 306 | 2.15e-19 | 87.4 |
MS.gene058487.t1 | MTR_1g051120 | 33.333 | 192 | 117 | 6 | 7 | 194 | 12 | 196 | 3.74e-19 | 85.5 |
MS.gene058487.t1 | MTR_3g072500 | 29.534 | 193 | 122 | 6 | 8 | 193 | 17 | 202 | 7.35e-19 | 84.0 |
MS.gene058487.t1 | MTR_8g006090 | 29.020 | 255 | 177 | 4 | 11 | 263 | 11 | 263 | 1.73e-17 | 81.6 |
MS.gene058487.t1 | MTR_1g052205 | 28.293 | 205 | 122 | 7 | 116 | 309 | 2 | 192 | 2.08e-17 | 80.5 |
MS.gene058487.t1 | MTR_8g006090 | 27.442 | 215 | 155 | 1 | 95 | 309 | 15 | 228 | 9.69e-17 | 79.0 |
MS.gene058487.t1 | MTR_4g094342 | 27.885 | 208 | 141 | 5 | 12 | 213 | 14 | 218 | 2.67e-16 | 77.4 |
MS.gene058487.t1 | MTR_4g094340 | 27.941 | 204 | 129 | 6 | 12 | 206 | 28 | 222 | 1.26e-13 | 69.3 |
MS.gene058487.t1 | MTR_8g006090 | 30.460 | 174 | 119 | 2 | 91 | 263 | 11 | 183 | 3.33e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058487.t1 | AT5G40240 | 55.128 | 312 | 135 | 3 | 1 | 309 | 9 | 318 | 2.66e-116 | 340 |
MS.gene058487.t1 | AT5G40240 | 55.128 | 312 | 135 | 3 | 1 | 309 | 9 | 318 | 2.66e-116 | 340 |
MS.gene058487.t1 | AT5G40240 | 55.128 | 312 | 135 | 3 | 1 | 309 | 23 | 332 | 8.72e-116 | 339 |
MS.gene058487.t1 | AT5G40230 | 53.115 | 305 | 138 | 4 | 8 | 309 | 17 | 319 | 1.61e-108 | 320 |
MS.gene058487.t1 | AT4G15540 | 54.248 | 306 | 128 | 2 | 4 | 309 | 9 | 302 | 3.34e-100 | 298 |
MS.gene058487.t1 | AT4G15540 | 54.248 | 306 | 128 | 2 | 4 | 309 | 9 | 302 | 3.34e-100 | 298 |
MS.gene058487.t1 | AT3G28050 | 48.387 | 310 | 153 | 4 | 1 | 309 | 1 | 304 | 4.89e-97 | 291 |
MS.gene058487.t1 | AT5G40210 | 44.481 | 308 | 151 | 4 | 3 | 309 | 4 | 292 | 6.09e-84 | 256 |
MS.gene058487.t1 | AT3G28100 | 45.277 | 307 | 158 | 5 | 8 | 309 | 10 | 311 | 1.18e-71 | 225 |
MS.gene058487.t1 | AT3G28130 | 44.918 | 305 | 162 | 5 | 8 | 309 | 9 | 310 | 1.56e-68 | 218 |
MS.gene058487.t1 | AT3G28070 | 43.322 | 307 | 164 | 5 | 8 | 309 | 13 | 314 | 9.02e-66 | 209 |
MS.gene058487.t1 | AT3G28070 | 43.038 | 316 | 168 | 6 | 1 | 309 | 4 | 314 | 2.54e-65 | 209 |
MS.gene058487.t1 | AT3G28080 | 42.345 | 307 | 167 | 5 | 8 | 309 | 10 | 311 | 3.94e-64 | 206 |
MS.gene058487.t1 | AT3G28080 | 40.391 | 307 | 165 | 6 | 8 | 309 | 10 | 303 | 7.82e-57 | 187 |
MS.gene058487.t1 | AT3G28100 | 45.703 | 256 | 130 | 4 | 8 | 258 | 10 | 261 | 9.24e-57 | 184 |
MS.gene058487.t1 | AT3G28070 | 43.439 | 221 | 116 | 4 | 94 | 309 | 6 | 222 | 2.88e-54 | 178 |
MS.gene058487.t1 | AT3G28130 | 45.662 | 219 | 114 | 4 | 94 | 309 | 8 | 224 | 3.05e-52 | 173 |
MS.gene058487.t1 | AT3G28130 | 45.662 | 219 | 114 | 4 | 94 | 309 | 8 | 224 | 3.05e-52 | 173 |
MS.gene058487.t1 | AT3G28130 | 44.664 | 253 | 135 | 4 | 8 | 257 | 9 | 259 | 1.12e-51 | 171 |
MS.gene058487.t1 | AT1G70260 | 32.154 | 311 | 199 | 6 | 8 | 309 | 8 | 315 | 3.13e-48 | 166 |
MS.gene058487.t1 | AT3G28080 | 41.284 | 218 | 119 | 4 | 97 | 309 | 9 | 222 | 1.07e-47 | 161 |
MS.gene058487.t1 | AT3G28080 | 41.284 | 218 | 119 | 4 | 97 | 309 | 9 | 222 | 1.07e-47 | 161 |
MS.gene058487.t1 | AT3G28080 | 41.284 | 218 | 119 | 4 | 97 | 309 | 9 | 222 | 1.07e-47 | 161 |
MS.gene058487.t1 | AT3G28080 | 41.284 | 218 | 119 | 4 | 97 | 309 | 9 | 222 | 1.07e-47 | 161 |
MS.gene058487.t1 | AT3G28100 | 47.573 | 206 | 100 | 3 | 8 | 209 | 10 | 211 | 1.34e-46 | 158 |
MS.gene058487.t1 | AT4G08290 | 31.788 | 302 | 198 | 5 | 12 | 309 | 13 | 310 | 1.32e-45 | 159 |
MS.gene058487.t1 | AT3G28130 | 47.059 | 204 | 104 | 3 | 8 | 209 | 9 | 210 | 2.19e-44 | 151 |
MS.gene058487.t1 | AT2G39510 | 31.000 | 300 | 202 | 5 | 12 | 309 | 8 | 304 | 1.86e-42 | 150 |
MS.gene058487.t1 | AT1G21890 | 30.312 | 320 | 204 | 5 | 3 | 309 | 2 | 315 | 3.17e-42 | 149 |
MS.gene058487.t1 | AT2G37460 | 31.210 | 314 | 197 | 6 | 4 | 309 | 7 | 309 | 4.35e-42 | 149 |
MS.gene058487.t1 | AT1G21890 | 30.312 | 320 | 204 | 5 | 3 | 309 | 2 | 315 | 5.34e-42 | 149 |
MS.gene058487.t1 | AT3G28080 | 35.948 | 306 | 134 | 5 | 8 | 309 | 10 | 257 | 5.93e-42 | 147 |
MS.gene058487.t1 | AT1G75500 | 29.703 | 303 | 202 | 5 | 15 | 309 | 23 | 322 | 7.16e-42 | 149 |
MS.gene058487.t1 | AT1G75500 | 29.703 | 303 | 202 | 5 | 15 | 309 | 23 | 322 | 7.16e-42 | 149 |
MS.gene058487.t1 | AT3G18200 | 31.987 | 297 | 194 | 5 | 15 | 309 | 38 | 328 | 8.77e-42 | 149 |
MS.gene058487.t1 | AT5G13670 | 32.792 | 308 | 198 | 7 | 7 | 309 | 3 | 306 | 2.26e-41 | 147 |
MS.gene058487.t1 | AT5G07050 | 29.870 | 308 | 202 | 6 | 12 | 309 | 18 | 321 | 2.42e-41 | 148 |
MS.gene058487.t1 | AT1G60050 | 33.227 | 313 | 197 | 6 | 7 | 309 | 8 | 318 | 4.62e-41 | 147 |
MS.gene058487.t1 | AT3G30340 | 30.164 | 305 | 207 | 4 | 9 | 309 | 5 | 307 | 8.88e-41 | 145 |
MS.gene058487.t1 | AT1G09380 | 29.508 | 305 | 209 | 4 | 9 | 309 | 5 | 307 | 1.49e-40 | 145 |
MS.gene058487.t1 | AT2G40900 | 28.205 | 312 | 207 | 5 | 3 | 309 | 2 | 301 | 3.43e-38 | 139 |
MS.gene058487.t1 | AT1G44800 | 28.525 | 305 | 210 | 5 | 8 | 309 | 7 | 306 | 3.27e-37 | 136 |
MS.gene058487.t1 | AT3G28070 | 39.153 | 189 | 106 | 4 | 126 | 309 | 1 | 185 | 8.64e-37 | 132 |
MS.gene058487.t1 | AT4G08300 | 28.146 | 302 | 210 | 4 | 12 | 309 | 11 | 309 | 2.03e-36 | 134 |
MS.gene058487.t1 | AT3G28130 | 41.176 | 187 | 105 | 4 | 126 | 309 | 1 | 185 | 1.08e-35 | 129 |
MS.gene058487.t1 | AT3G56620 | 27.632 | 304 | 202 | 5 | 12 | 309 | 11 | 302 | 3.45e-35 | 131 |
MS.gene058487.t1 | AT4G08290 | 33.333 | 243 | 154 | 5 | 12 | 250 | 13 | 251 | 4.06e-35 | 129 |
MS.gene058487.t1 | AT3G53210 | 29.054 | 296 | 207 | 3 | 15 | 309 | 13 | 306 | 5.44e-35 | 130 |
MS.gene058487.t1 | AT1G01070 | 29.582 | 311 | 215 | 4 | 1 | 309 | 5 | 313 | 2.23e-34 | 129 |
MS.gene058487.t1 | AT1G68170 | 28.435 | 313 | 213 | 7 | 4 | 309 | 3 | 311 | 1.06e-33 | 127 |
MS.gene058487.t1 | AT5G64700 | 31.818 | 286 | 186 | 7 | 31 | 309 | 27 | 310 | 3.69e-33 | 125 |
MS.gene058487.t1 | AT4G01440 | 26.710 | 307 | 219 | 5 | 5 | 309 | 3 | 305 | 4.48e-33 | 124 |
MS.gene058487.t1 | AT1G11450 | 30.000 | 300 | 204 | 6 | 12 | 309 | 16 | 311 | 4.97e-33 | 124 |
MS.gene058487.t1 | AT1G68170 | 28.990 | 307 | 206 | 7 | 8 | 309 | 2 | 301 | 6.31e-33 | 124 |
MS.gene058487.t1 | AT4G01440 | 26.710 | 307 | 219 | 5 | 5 | 309 | 3 | 305 | 8.72e-33 | 124 |
MS.gene058487.t1 | AT1G11450 | 30.000 | 300 | 204 | 6 | 12 | 309 | 16 | 311 | 1.44e-32 | 124 |
MS.gene058487.t1 | AT3G28080 | 37.566 | 189 | 109 | 4 | 126 | 309 | 1 | 185 | 6.49e-32 | 119 |
MS.gene058487.t1 | AT3G30340 | 29.020 | 255 | 175 | 4 | 9 | 259 | 5 | 257 | 1.51e-31 | 119 |
MS.gene058487.t1 | AT4G01430 | 28.912 | 294 | 191 | 7 | 26 | 309 | 23 | 308 | 2.35e-31 | 119 |
MS.gene058487.t1 | AT1G11460 | 28.667 | 300 | 209 | 5 | 12 | 309 | 16 | 312 | 2.64e-31 | 120 |
MS.gene058487.t1 | AT1G43650 | 30.743 | 296 | 198 | 5 | 15 | 309 | 10 | 299 | 3.66e-31 | 119 |
MS.gene058487.t1 | AT4G28040 | 29.773 | 309 | 191 | 8 | 7 | 309 | 6 | 294 | 6.31e-31 | 119 |
MS.gene058487.t1 | AT4G28040 | 29.773 | 309 | 191 | 8 | 7 | 309 | 6 | 294 | 6.31e-31 | 119 |
MS.gene058487.t1 | AT4G28040 | 29.773 | 309 | 191 | 8 | 7 | 309 | 6 | 294 | 6.31e-31 | 119 |
MS.gene058487.t1 | AT4G28040 | 29.773 | 309 | 191 | 8 | 7 | 309 | 6 | 294 | 6.31e-31 | 119 |
MS.gene058487.t1 | AT4G28040 | 29.773 | 309 | 191 | 8 | 7 | 309 | 6 | 294 | 6.31e-31 | 119 |
MS.gene058487.t1 | AT5G45370 | 29.801 | 302 | 194 | 7 | 11 | 309 | 19 | 305 | 7.42e-31 | 119 |
MS.gene058487.t1 | AT4G01430 | 28.912 | 294 | 191 | 7 | 26 | 309 | 23 | 308 | 9.58e-31 | 119 |
MS.gene058487.t1 | AT5G45370 | 28.616 | 318 | 201 | 8 | 11 | 309 | 19 | 329 | 1.91e-30 | 118 |
MS.gene058487.t1 | AT5G45370 | 28.616 | 318 | 201 | 8 | 11 | 309 | 19 | 329 | 1.91e-30 | 118 |
MS.gene058487.t1 | AT2G37450 | 30.225 | 311 | 179 | 6 | 6 | 309 | 3 | 282 | 1.08e-29 | 115 |
MS.gene058487.t1 | AT1G11450 | 30.712 | 267 | 179 | 6 | 45 | 309 | 5 | 267 | 2.30e-29 | 114 |
MS.gene058487.t1 | AT1G01070 | 30.992 | 242 | 165 | 2 | 70 | 309 | 25 | 266 | 2.72e-29 | 114 |
MS.gene058487.t1 | AT1G25270 | 27.273 | 297 | 212 | 4 | 15 | 309 | 6 | 300 | 3.28e-29 | 114 |
MS.gene058487.t1 | AT3G53210 | 31.624 | 234 | 157 | 3 | 15 | 247 | 13 | 244 | 8.21e-29 | 111 |
MS.gene058487.t1 | AT1G11450 | 30.739 | 257 | 173 | 5 | 55 | 309 | 7 | 260 | 2.30e-28 | 111 |
MS.gene058487.t1 | AT3G18200 | 32.178 | 202 | 132 | 2 | 109 | 309 | 1 | 198 | 2.58e-28 | 110 |
MS.gene058487.t1 | AT3G45870 | 28.896 | 308 | 201 | 6 | 15 | 309 | 15 | 317 | 2.29e-27 | 109 |
MS.gene058487.t1 | AT3G53210 | 28.099 | 242 | 174 | 0 | 68 | 309 | 8 | 249 | 2.97e-27 | 108 |
MS.gene058487.t1 | AT4G30420 | 27.597 | 308 | 212 | 5 | 8 | 309 | 5 | 307 | 3.27e-27 | 109 |
MS.gene058487.t1 | AT3G45870 | 28.896 | 308 | 201 | 6 | 15 | 309 | 15 | 317 | 6.46e-27 | 108 |
MS.gene058487.t1 | AT4G30420 | 27.907 | 301 | 206 | 5 | 15 | 309 | 2 | 297 | 1.57e-26 | 107 |
MS.gene058487.t1 | AT4G01450 | 27.972 | 286 | 196 | 5 | 26 | 309 | 24 | 301 | 2.79e-26 | 106 |
MS.gene058487.t1 | AT3G28080 | 32.258 | 217 | 86 | 4 | 97 | 309 | 9 | 168 | 4.67e-26 | 103 |
MS.gene058487.t1 | AT4G19185 | 28.704 | 324 | 212 | 7 | 2 | 309 | 10 | 330 | 1.29e-25 | 105 |
MS.gene058487.t1 | AT4G01450 | 27.817 | 284 | 195 | 5 | 26 | 307 | 24 | 299 | 2.95e-25 | 103 |
MS.gene058487.t1 | AT4G01440 | 27.451 | 255 | 179 | 5 | 5 | 257 | 3 | 253 | 5.06e-25 | 101 |
MS.gene058487.t1 | AT1G11450 | 31.818 | 220 | 147 | 3 | 91 | 309 | 2 | 219 | 5.92e-25 | 101 |
MS.gene058487.t1 | AT5G64700 | 31.197 | 234 | 152 | 7 | 31 | 257 | 27 | 258 | 1.07e-23 | 98.2 |
MS.gene058487.t1 | AT4G01450 | 28.632 | 234 | 157 | 5 | 26 | 257 | 24 | 249 | 1.91e-23 | 97.4 |
MS.gene058487.t1 | AT2G37450 | 31.050 | 219 | 135 | 3 | 98 | 309 | 1 | 210 | 1.17e-21 | 92.4 |
MS.gene058487.t1 | AT4G19185 | 28.750 | 240 | 154 | 4 | 84 | 309 | 16 | 252 | 1.95e-21 | 92.8 |
MS.gene058487.t1 | AT1G43650 | 31.687 | 243 | 159 | 5 | 15 | 256 | 10 | 246 | 2.25e-21 | 91.7 |
MS.gene058487.t1 | AT4G01440 | 25.253 | 198 | 147 | 1 | 112 | 309 | 1 | 197 | 7.24e-21 | 90.1 |
MS.gene058487.t1 | AT4G01440 | 25.253 | 198 | 147 | 1 | 112 | 309 | 1 | 197 | 7.24e-21 | 90.1 |
MS.gene058487.t1 | AT4G01450 | 31.414 | 191 | 121 | 5 | 26 | 214 | 24 | 206 | 1.54e-20 | 89.0 |
MS.gene058487.t1 | AT5G45370 | 27.948 | 229 | 146 | 5 | 97 | 309 | 2 | 227 | 1.33e-19 | 87.0 |
MS.gene058487.t1 | AT5G45370 | 27.948 | 229 | 146 | 5 | 97 | 309 | 2 | 227 | 1.33e-19 | 87.0 |
MS.gene058487.t1 | AT3G45870 | 31.651 | 218 | 132 | 5 | 15 | 219 | 15 | 228 | 3.82e-19 | 85.9 |
MS.gene058487.t1 | AT3G28060 | 32.520 | 123 | 81 | 2 | 188 | 309 | 33 | 154 | 7.22e-19 | 82.4 |
MS.gene058487.t1 | AT3G28070 | 50.000 | 118 | 58 | 1 | 8 | 125 | 13 | 129 | 7.84e-18 | 80.9 |
MS.gene058487.t1 | AT4G24980 | 25.704 | 284 | 143 | 9 | 26 | 309 | 1 | 216 | 4.17e-17 | 80.1 |
MS.gene058487.t1 | AT5G47470 | 22.742 | 299 | 218 | 6 | 15 | 309 | 33 | 322 | 5.35e-16 | 78.2 |
MS.gene058487.t1 | AT5G47470 | 22.742 | 299 | 218 | 6 | 15 | 309 | 61 | 350 | 7.50e-16 | 77.8 |
MS.gene058487.t1 | AT5G47470 | 22.742 | 299 | 218 | 6 | 15 | 309 | 61 | 350 | 7.86e-16 | 77.8 |
MS.gene058487.t1 | AT4G16620 | 25.000 | 272 | 178 | 7 | 51 | 309 | 50 | 308 | 1.07e-14 | 74.3 |
MS.gene058487.t1 | AT4G16620 | 24.887 | 221 | 147 | 4 | 98 | 309 | 1 | 211 | 2.90e-12 | 66.2 |
MS.gene058487.t1 | AT4G16620 | 24.887 | 221 | 147 | 4 | 98 | 309 | 1 | 211 | 2.90e-12 | 66.2 |
MS.gene058487.t1 | AT4G16620 | 26.396 | 197 | 135 | 5 | 51 | 243 | 50 | 240 | 5.96e-12 | 65.5 |
MS.gene058487.t1 | AT3G45870 | 23.810 | 231 | 158 | 4 | 91 | 309 | 18 | 242 | 7.73e-12 | 64.7 |
MS.gene058487.t1 | AT3G45870 | 23.810 | 231 | 158 | 4 | 91 | 309 | 18 | 242 | 7.73e-12 | 64.7 |
MS.gene058487.t1 | AT3G45870 | 23.810 | 231 | 158 | 4 | 91 | 309 | 18 | 242 | 2.63e-11 | 63.9 |
MS.gene058487.t1 | AT4G01430 | 23.864 | 176 | 122 | 3 | 141 | 309 | 1 | 171 | 7.53e-11 | 61.6 |
Find 74 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTGGTGATGCACTGCATTT+TGG | 0.191757 | 1.4:+7766403 | MS.gene058487:CDS |
CCTAATAGTTGTTCTTTATA+AGG | 0.207517 | 1.4:+7765558 | MS.gene058487:CDS |
TCCAATATGGTACATTATTC+AGG | 0.222282 | 1.4:+7765705 | MS.gene058487:CDS |
ACAGAATCAAATTGGATTCT+TGG | 0.236085 | 1.4:+7765649 | MS.gene058487:CDS |
CCTTATAAAGAACAACTATT+AGG | 0.270894 | 1.4:-7765558 | None:intergenic |
GGTTCTACGGTATCAATATT+AGG | 0.271179 | 1.4:+7765532 | MS.gene058487:CDS |
CCTCAACAACAGAATCAAAT+TGG | 0.275934 | 1.4:+7765641 | MS.gene058487:CDS |
AGTTTCTTATTGTTCCAATA+TGG | 0.297844 | 1.4:+7765692 | MS.gene058487:CDS |
ATGGAGATCATTGTTATATC+AGG | 0.299829 | 1.4:-7765959 | None:intergenic |
GATGGTGAGGGTATGATTAT+TGG | 0.303670 | 1.4:-7765583 | None:intergenic |
ACTTGGGGACTACATATTAA+AGG | 0.320640 | 1.4:+7766313 | MS.gene058487:CDS |
CTAATAGTTGTTCTTTATAA+GGG | 0.322927 | 1.4:+7765559 | MS.gene058487:CDS |
ATCTTCCAAGCATTCAAGTT+TGG | 0.339337 | 1.4:-7765932 | None:intergenic |
TTAAAGAGTGATATATAAAC+AGG | 0.340392 | 1.4:-7766337 | None:intergenic |
CTCTCCCCTTCTTTATCAAA+TGG | 0.343306 | 1.4:+7764125 | MS.gene058487:CDS |
GCTCAGCTCTTTGGATATAA+AGG | 0.343826 | 1.4:+7764423 | MS.gene058487:CDS |
GTGATTGGAGAATGAATAAT+AGG | 0.368778 | 1.4:-7765619 | None:intergenic |
TTCTACAGGACTAAGTTGTT+TGG | 0.372838 | 1.4:+7766285 | MS.gene058487:CDS |
ACCTGAATAATGTACCATAT+TGG | 0.374880 | 1.4:-7765706 | None:intergenic |
ATAGGTGGTGGTTGTGTTGA+TGG | 0.377265 | 1.4:-7765601 | None:intergenic |
AGGATGGAGAAGGTAAAATT+AGG | 0.378528 | 1.4:+7765481 | MS.gene058487:intron |
AGAGTTGTAGCTCAGCTCTT+TGG | 0.379055 | 1.4:+7764414 | MS.gene058487:intron |
CTTATAAAGAACAACTATTA+GGG | 0.392099 | 1.4:-7765557 | None:intergenic |
TTCAAAGCAGCTACTCAAAA+GGG | 0.408454 | 1.4:+7764040 | MS.gene058487:CDS |
GATTCTGTTGTTGAGGTGAT+TGG | 0.432000 | 1.4:-7765634 | None:intergenic |
ATTCAAAGCAGCTACTCAAA+AGG | 0.435610 | 1.4:+7764039 | MS.gene058487:CDS |
AGTGGAGACAACAAATGAAT+AGG | 0.435890 | 1.4:-7764086 | None:intergenic |
TGTAAAAGCAGGTATAAGAT+TGG | 0.445087 | 1.4:-7764484 | None:intergenic |
AGATCACCATTTGATAAAGA+AGG | 0.450262 | 1.4:-7764131 | None:intergenic |
AAGCAGTCAAGCAAAGATCT+TGG | 0.450311 | 1.4:+7765510 | MS.gene058487:CDS |
TAGAACCAAACTTGAATGCT+TGG | 0.454876 | 1.4:+7765927 | MS.gene058487:CDS |
ATTGCAACCATTGCTGTGAA+TGG | 0.457297 | 1.4:-7763986 | None:intergenic |
TTTCTTTACCGAGCATATGA+TGG | 0.466932 | 1.4:-7765978 | None:intergenic |
AATACCACAATAATCTCTGC+TGG | 0.471152 | 1.4:-7765854 | None:intergenic |
GGTTCTAGTAGTAAGCATAT+TGG | 0.475641 | 1.4:-7765911 | None:intergenic |
TAAAGAAGGGGAGAGGCAAA+AGG | 0.494021 | 1.4:-7764117 | None:intergenic |
TGGTGGTTGTGTTGATGGTG+AGG | 0.494359 | 1.4:-7765596 | None:intergenic |
AAGTTGTTTGGTTCACACTT+GGG | 0.495577 | 1.4:+7766297 | MS.gene058487:CDS |
AGCAAAGATCTTGGGTTCTA+CGG | 0.496585 | 1.4:+7765519 | MS.gene058487:CDS |
AGCAGTCAAGCAAAGATCTT+GGG | 0.501625 | 1.4:+7765511 | MS.gene058487:CDS |
GATCACCATTTGATAAAGAA+GGG | 0.505013 | 1.4:-7764130 | None:intergenic |
GAGGGAGTGAGAGAGATGGC+TGG | 0.508679 | 1.4:+7763938 | None:intergenic |
GAATCAAATTGGATTCTTGG+TGG | 0.509232 | 1.4:+7765652 | MS.gene058487:CDS |
TAAGTTGTTTGGTTCACACT+TGG | 0.515322 | 1.4:+7766296 | MS.gene058487:CDS |
CCAATTTGATTCTGTTGTTG+AGG | 0.516438 | 1.4:-7765641 | None:intergenic |
AGGGAGTGAGAGAGATGGCT+GGG | 0.523477 | 1.4:+7763939 | None:intergenic |
GGTGGTTGTGTTGATGGTGA+GGG | 0.534351 | 1.4:-7765595 | None:intergenic |
GGCTGGGAGGCATTGTTACA+AGG | 0.538462 | 1.4:+7763955 | MS.gene058487:CDS |
TTGCAACCATTGCTGTGAAT+GGG | 0.538780 | 1.4:-7763985 | None:intergenic |
AGTTGTTTGGTTCACACTTG+GGG | 0.541777 | 1.4:+7766298 | MS.gene058487:CDS |
TGGAGAAGGTAAAATTAGGA+TGG | 0.545808 | 1.4:+7765485 | MS.gene058487:CDS |
GAAAGAGATGAAGCAAGAGT+AGG | 0.546261 | 1.4:-7764462 | None:intergenic |
GGCACCTGAAAATGATAGCT+AGG | 0.559539 | 1.4:-7764512 | None:intergenic |
CATATTTATGAAGGTCAAGA+GGG | 0.562057 | 1.4:+7764237 | MS.gene058487:intron |
GCTAGGATGAATGTAAAAGC+AGG | 0.575660 | 1.4:-7764495 | None:intergenic |
AATGATCTCCATCATATGCT+CGG | 0.578698 | 1.4:+7765970 | MS.gene058487:CDS |
AGGCAAAAGGAGAACAAGAG+TGG | 0.584664 | 1.4:-7764104 | None:intergenic |
AAGATTAGAGACATGTTCAA+AGG | 0.591308 | 1.4:-7764266 | None:intergenic |
GCATATTTATGAAGGTCAAG+AGG | 0.603216 | 1.4:+7764236 | MS.gene058487:intron |
ATTAGAGACATGTTCAAAGG+AGG | 0.612665 | 1.4:-7764263 | None:intergenic |
TGTGCTCCCATTCACAGCAA+TGG | 0.613703 | 1.4:+7763979 | MS.gene058487:CDS |
GCAATAGAGTGCACAAACGT+TGG | 0.615362 | 1.4:+7764004 | MS.gene058487:CDS |
AAGTTCACCCCAAAACTCCA+AGG | 0.620017 | 1.4:-7764301 | None:intergenic |
GGAGAATGAATAATAGGTGG+TGG | 0.626803 | 1.4:-7765613 | None:intergenic |
CATTTGATAAAGAAGGGGAG+AGG | 0.627315 | 1.4:-7764124 | None:intergenic |
TGTTAAATGAAGGATGGAGA+AGG | 0.629322 | 1.4:+7765471 | MS.gene058487:intron |
ATCACCATTTGATAAAGAAG+GGG | 0.630121 | 1.4:-7764129 | None:intergenic |
TCAAAGCAGCTACTCAAAAG+GGG | 0.631039 | 1.4:+7764041 | MS.gene058487:CDS |
GAGTGAGAGAGATGGCTGGG+AGG | 0.637450 | 1.4:+7763942 | None:intergenic |
GCAGCAATAGCTATTGACAA+AGG | 0.666684 | 1.4:-7766361 | None:intergenic |
ATTGGAGAATGAATAATAGG+TGG | 0.670121 | 1.4:-7765616 | None:intergenic |
AAGACACTAGTACTCCACAT+AGG | 0.673627 | 1.4:-7765886 | None:intergenic |
ATATCCAGCAGAGATTATTG+TGG | 0.688546 | 1.4:+7765850 | MS.gene058487:CDS |
TAAAGAGTGATATATAAACA+GGG | 0.722232 | 1.4:-7766336 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAATAATATTACTTAAAAAA+TGG | - | chr1.4:7764350-7764369 | None:intergenic | 10.0% |
!!! | ATTTTAATGTTTTATTTGTT+CGG | - | chr1.4:7764874-7764893 | None:intergenic | 10.0% |
!!! | TTTTTTTTTCAATATTATGT+AGG | - | chr1.4:7765338-7765357 | None:intergenic | 10.0% |
!! | TGAAATTTGTATTTAGTAAT+GGG | + | chr1.4:7764659-7764678 | MS.gene058487:intron | 15.0% |
!! | TTAAATATGCATATTTATGA+AGG | + | chr1.4:7764228-7764247 | MS.gene058487:intron | 15.0% |
!!! | AAAACATATTAATTTTTAGG+TGG | + | chr1.4:7764961-7764980 | MS.gene058487:intron | 15.0% |
!!! | AAACAGATGAAAATTTTATT+GGG | + | chr1.4:7764815-7764834 | MS.gene058487:intron | 15.0% |
!!! | AAACATATTAATTTTTAGGT+GGG | + | chr1.4:7764962-7764981 | MS.gene058487:intron | 15.0% |
!!! | AAATAATATTCGATTTTATG+AGG | + | chr1.4:7765263-7765282 | MS.gene058487:intron | 15.0% |
!!! | TACACAATATCTATAATTTT+TGG | + | chr1.4:7766204-7766223 | MS.gene058487:intron | 15.0% |
!!! | TTTTAATGTTTTATTTGTTC+GGG | - | chr1.4:7764873-7764892 | None:intergenic | 15.0% |
!!! | TTTTTATTGTGAAACAATAT+TGG | + | chr1.4:7765447-7765466 | MS.gene058487:intron | 15.0% |
!! | AATTATCACTGAAACTAAAT+TGG | + | chr1.4:7766110-7766129 | MS.gene058487:intron | 20.0% |
!! | ATTATAGATATTGTGTACTT+TGG | - | chr1.4:7766201-7766220 | None:intergenic | 20.0% |
!! | CAATAAAATTCTAGGTTTAT+CGG | + | chr1.4:7765049-7765068 | MS.gene058487:intron | 20.0% |
!! | CATTACTAAATACAAATTTC+AGG | - | chr1.4:7764660-7764679 | None:intergenic | 20.0% |
!! | CTAATAGTTGTTCTTTATAA+GGG | + | chr1.4:7765559-7765578 | MS.gene058487:CDS | 20.0% |
!! | CTGAAATTTGTATTTAGTAA+TGG | + | chr1.4:7764658-7764677 | MS.gene058487:intron | 20.0% |
!! | CTTATAAAGAACAACTATTA+GGG | - | chr1.4:7765560-7765579 | None:intergenic | 20.0% |
!! | GAAAAAAAAACTTCAAGATT+AGG | + | chr1.4:7764993-7765012 | MS.gene058487:intron | 20.0% |
!! | TAAAGAGTGATATATAAACA+GGG | - | chr1.4:7766339-7766358 | None:intergenic | 20.0% |
!! | TCAAAAACTCAAATTCTTAA+AGG | - | chr1.4:7764327-7764346 | None:intergenic | 20.0% |
!! | TTAAAGAGTGATATATAAAC+AGG | - | chr1.4:7766340-7766359 | None:intergenic | 20.0% |
!!! | AAAAATAACATTTTTTCGGT+TGG | + | chr1.4:7765354-7765373 | MS.gene058487:intron | 20.0% |
!!! | AAAATAACATTTTTTCGGTT+GGG | + | chr1.4:7765355-7765374 | MS.gene058487:intron | 20.0% |
!!! | AAACCATTTTTGTATCTTTT+AGG | - | chr1.4:7764784-7764803 | None:intergenic | 20.0% |
!!! | AATCTTGAAGTTTTTTTTTC+CGG | - | chr1.4:7764993-7765012 | None:intergenic | 20.0% |
!!! | CAAACAGATGAAAATTTTAT+TGG | + | chr1.4:7764814-7764833 | MS.gene058487:intron | 20.0% |
!!! | CAATAAAATTTTCATCTGTT+TGG | - | chr1.4:7764816-7764835 | None:intergenic | 20.0% |
!!! | CAGATTTCATATTATTGTTT+TGG | - | chr1.4:7765194-7765213 | None:intergenic | 20.0% |
!!! | GATTTTATGAGGTTTTTATT+TGG | + | chr1.4:7765274-7765293 | MS.gene058487:intron | 20.0% |
!!! | TTATTAGCTTGTGATTAATT+TGG | + | chr1.4:7764730-7764749 | MS.gene058487:intron | 20.0% |
! | AACGTAAGCAATAAAATTCT+AGG | + | chr1.4:7765041-7765060 | MS.gene058487:intron | 25.0% |
! | ACTTGATCTGTAAGAAAAAT+GGG | - | chr1.4:7765145-7765164 | None:intergenic | 25.0% |
! | AGTTTCAGTGATAATTCAAA+AGG | - | chr1.4:7766106-7766125 | None:intergenic | 25.0% |
! | AGTTTCTTATTGTTCCAATA+TGG | + | chr1.4:7765692-7765711 | MS.gene058487:CDS | 25.0% |
! | CCTAATAGTTGTTCTTTATA+AGG | + | chr1.4:7765558-7765577 | MS.gene058487:CDS | 25.0% |
! | CCTTATAAAGAACAACTATT+AGG | - | chr1.4:7765561-7765580 | None:intergenic | 25.0% |
! | GTTCCTAAAAGATACAAAAA+TGG | + | chr1.4:7764778-7764797 | MS.gene058487:intron | 25.0% |
! | GTTTCAGTGATAATTCAAAA+GGG | - | chr1.4:7766105-7766124 | None:intergenic | 25.0% |
! | TTCATACAATTTGATGAACA+TGG | + | chr1.4:7764693-7764712 | MS.gene058487:intron | 25.0% |
!! | AAAATTTTCATCTTCATGCA+GGG | + | chr1.4:7766256-7766275 | MS.gene058487:intron | 25.0% |
!! | AAATTTTCATCTGTTTGGAT+TGG | - | chr1.4:7764811-7764830 | None:intergenic | 25.0% |
!! | AATTTTATTGCTTACGTTGT+TGG | - | chr1.4:7765039-7765058 | None:intergenic | 25.0% |
!! | AATTTTCATCTGTTTGGATT+GGG | - | chr1.4:7764810-7764829 | None:intergenic | 25.0% |
!! | AGATGAAAATTTTATTGGGT+CGG | + | chr1.4:7764819-7764838 | MS.gene058487:intron | 25.0% |
!! | CAATATTGGTTGTTAAATGA+AGG | + | chr1.4:7765461-7765480 | MS.gene058487:intron | 25.0% |
!! | TAATCATGTTTTGTCATTGA+CGG | - | chr1.4:7764932-7764951 | None:intergenic | 25.0% |
!! | TAATTTTGTGTGTTTCACTA+TGG | + | chr1.4:7765412-7765431 | MS.gene058487:intron | 25.0% |
!! | TCTTTTAGTGCTATATTTCT+TGG | + | chr1.4:7766385-7766404 | MS.gene058487:CDS | 25.0% |
!!! | AGAAATTGTTGCTTGTTATT+TGG | - | chr1.4:7766231-7766250 | None:intergenic | 25.0% |
!!! | ATCTTGAAGTTTTTTTTTCC+GGG | - | chr1.4:7764992-7765011 | None:intergenic | 25.0% |
!!! | GGATATTTTTCAAATGCTTA+CGG | + | chr1.4:7764597-7764616 | MS.gene058487:intron | 25.0% |
!!! | GGTTTTTATTTGGATTAGTT+TGG | + | chr1.4:7765284-7765303 | MS.gene058487:intron | 25.0% |
!!! | GTATTTTTATACAACCTATG+TGG | + | chr1.4:7765872-7765891 | MS.gene058487:CDS | 25.0% |
AAAATTCTAGGTTTATCGGA+CGG | + | chr1.4:7765053-7765072 | MS.gene058487:intron | 30.0% | |
AAGATTAGAGACATGTTCAA+AGG | - | chr1.4:7764269-7764288 | None:intergenic | 30.0% | |
AATGCATTCATAGAGAAGAA+TGG | - | chr1.4:7764184-7764203 | None:intergenic | 30.0% | |
ACAGAATCAAATTGGATTCT+TGG | + | chr1.4:7765649-7765668 | MS.gene058487:CDS | 30.0% | |
ACCTGAATAATGTACCATAT+TGG | - | chr1.4:7765709-7765728 | None:intergenic | 30.0% | |
ACTAAATTGGTCAACTCAAA+AGG | + | chr1.4:7766123-7766142 | MS.gene058487:intron | 30.0% | |
AGATCACCATTTGATAAAGA+AGG | - | chr1.4:7764134-7764153 | None:intergenic | 30.0% | |
ATCACCATTTGATAAAGAAG+GGG | - | chr1.4:7764132-7764151 | None:intergenic | 30.0% | |
ATGGAGATCATTGTTATATC+AGG | - | chr1.4:7765962-7765981 | None:intergenic | 30.0% | |
ATTGGAGAATGAATAATAGG+TGG | - | chr1.4:7765619-7765638 | None:intergenic | 30.0% | |
ATTGGTTGTTAAATGAAGGA+TGG | + | chr1.4:7765465-7765484 | MS.gene058487:intron | 30.0% | |
CATATTTATGAAGGTCAAGA+GGG | + | chr1.4:7764237-7764256 | MS.gene058487:intron | 30.0% | |
CTTGATCTGTAAGAAAAATG+GGG | - | chr1.4:7765144-7765163 | None:intergenic | 30.0% | |
GACTTGATCTGTAAGAAAAA+TGG | - | chr1.4:7765146-7765165 | None:intergenic | 30.0% | |
GATCACCATTTGATAAAGAA+GGG | - | chr1.4:7764133-7764152 | None:intergenic | 30.0% | |
GTGATTGGAGAATGAATAAT+AGG | - | chr1.4:7765622-7765641 | None:intergenic | 30.0% | |
TAAGGAAAATTGTGAGCTAA+TGG | + | chr1.4:7765076-7765095 | MS.gene058487:intron | 30.0% | |
TCCAATATGGTACATTATTC+AGG | + | chr1.4:7765705-7765724 | MS.gene058487:CDS | 30.0% | |
TGTAAAAGCAGGTATAAGAT+TGG | - | chr1.4:7764487-7764506 | None:intergenic | 30.0% | |
TTTGATAAATTGTGTGAGTG+AGG | + | chr1.4:7764390-7764409 | MS.gene058487:intron | 30.0% | |
! | AATCATGTTTTGTCATTGAC+GGG | - | chr1.4:7764931-7764950 | None:intergenic | 30.0% |
! | AATTTTTCTCCTTGGAGTTT+TGG | + | chr1.4:7764292-7764311 | MS.gene058487:CDS | 30.0% |
! | ATCTTCAGAATTTTTCTCCT+TGG | + | chr1.4:7764284-7764303 | MS.gene058487:CDS | 30.0% |
! | ATTTTTCTCCTTGGAGTTTT+GGG | + | chr1.4:7764293-7764312 | MS.gene058487:CDS | 30.0% |
! | GAAAATTTTCATCTTCATGC+AGG | + | chr1.4:7766255-7766274 | MS.gene058487:intron | 30.0% |
! | GATGAAAATTTTATTGGGTC+GGG | + | chr1.4:7764820-7764839 | MS.gene058487:intron | 30.0% |
! | TAAAATTTTACCTACCCTGA+TGG | + | chr1.4:7764888-7764907 | MS.gene058487:intron | 30.0% |
!! | AATGGACTAAAAAAAGTGAG+CGG | + | chr1.4:7765094-7765113 | MS.gene058487:intron | 30.0% |
AAGAAATCACTTGCTTGAAC+AGG | + | chr1.4:7764571-7764590 | MS.gene058487:intron | 35.0% | |
AAGAGTAGAGTAAGAGAGAT+AGG | - | chr1.4:7764536-7764555 | None:intergenic | 35.0% | |
AATACCACAATAATCTCTGC+TGG | - | chr1.4:7765857-7765876 | None:intergenic | 35.0% | |
AATGATCTCCATCATATGCT+CGG | + | chr1.4:7765970-7765989 | MS.gene058487:CDS | 35.0% | |
ACTTGGGGACTACATATTAA+AGG | + | chr1.4:7766313-7766332 | MS.gene058487:CDS | 35.0% | |
AGGATGGAGAAGGTAAAATT+AGG | + | chr1.4:7765481-7765500 | MS.gene058487:intron | 35.0% | |
AGTGGAGACAACAAATGAAT+AGG | - | chr1.4:7764089-7764108 | None:intergenic | 35.0% | |
ATAACAGTTGTCTGTTTGCA+AGG | - | chr1.4:7765824-7765843 | None:intergenic | 35.0% | |
ATATCCAGCAGAGATTATTG+TGG | + | chr1.4:7765850-7765869 | MS.gene058487:CDS | 35.0% | |
ATCTGTAAGAAAAATGGGGA+GGG | - | chr1.4:7765140-7765159 | None:intergenic | 35.0% | |
ATTAGAGACATGTTCAAAGG+AGG | - | chr1.4:7764266-7764285 | None:intergenic | 35.0% | |
ATTCAAAGCAGCTACTCAAA+AGG | + | chr1.4:7764039-7764058 | MS.gene058487:CDS | 35.0% | |
CCAATTTGATTCTGTTGTTG+AGG | - | chr1.4:7765644-7765663 | None:intergenic | 35.0% | |
CCTCAACAACAGAATCAAAT+TGG | + | chr1.4:7765641-7765660 | MS.gene058487:CDS | 35.0% | |
GAATCAAATTGGATTCTTGG+TGG | + | chr1.4:7765652-7765671 | MS.gene058487:CDS | 35.0% | |
GCATATTTATGAAGGTCAAG+AGG | + | chr1.4:7764236-7764255 | MS.gene058487:intron | 35.0% | |
GGTTCTACGGTATCAATATT+AGG | + | chr1.4:7765532-7765551 | MS.gene058487:CDS | 35.0% | |
TAGAACCAAACTTGAATGCT+TGG | + | chr1.4:7765927-7765946 | MS.gene058487:CDS | 35.0% | |
TGGAGAAGGTAAAATTAGGA+TGG | + | chr1.4:7765485-7765504 | MS.gene058487:CDS | 35.0% | |
TGTTAAATGAAGGATGGAGA+AGG | + | chr1.4:7765471-7765490 | MS.gene058487:intron | 35.0% | |
TTCAAAGCAGCTACTCAAAA+GGG | + | chr1.4:7764040-7764059 | MS.gene058487:CDS | 35.0% | |
TTCTACAGGACTAAGTTGTT+TGG | + | chr1.4:7766285-7766304 | MS.gene058487:CDS | 35.0% | |
TTTCTTTACCGAGCATATGA+TGG | - | chr1.4:7765981-7766000 | None:intergenic | 35.0% | |
! | AAGTTGTTTGGTTCACACTT+GGG | + | chr1.4:7766297-7766316 | MS.gene058487:CDS | 35.0% |
! | ATCTTCCAAGCATTCAAGTT+TGG | - | chr1.4:7765935-7765954 | None:intergenic | 35.0% |
! | GGTTCTAGTAGTAAGCATAT+TGG | - | chr1.4:7765914-7765933 | None:intergenic | 35.0% |
! | TAAGTTGTTTGGTTCACACT+TGG | + | chr1.4:7766296-7766315 | MS.gene058487:CDS | 35.0% |
! | TCATCCTAGCTATCATTTTC+AGG | + | chr1.4:7764508-7764527 | MS.gene058487:CDS | 35.0% |
! | TGTTTTACGACCACTCAAAT+CGG | - | chr1.4:7765219-7765238 | None:intergenic | 35.0% |
! | TTTTTCTCCTTGGAGTTTTG+GGG | + | chr1.4:7764294-7764313 | MS.gene058487:CDS | 35.0% |
AAGACACTAGTACTCCACAT+AGG | - | chr1.4:7765889-7765908 | None:intergenic | 40.0% | |
AAGCAGTCAAGCAAAGATCT+TGG | + | chr1.4:7765510-7765529 | MS.gene058487:CDS | 40.0% | |
AATCACTTGCTTGAACAGGA+AGG | + | chr1.4:7764575-7764594 | MS.gene058487:intron | 40.0% | |
AGCAAAGATCTTGGGTTCTA+CGG | + | chr1.4:7765519-7765538 | MS.gene058487:CDS | 40.0% | |
AGCAGTCAAGCAAAGATCTT+GGG | + | chr1.4:7765511-7765530 | MS.gene058487:CDS | 40.0% | |
ATCACTTGCTTGAACAGGAA+GGG | + | chr1.4:7764576-7764595 | MS.gene058487:intron | 40.0% | |
ATTGCAACCATTGCTGTGAA+TGG | - | chr1.4:7763989-7764008 | None:intergenic | 40.0% | |
CATTTGATAAAGAAGGGGAG+AGG | - | chr1.4:7764127-7764146 | None:intergenic | 40.0% | |
CTCTCCCCTTCTTTATCAAA+TGG | + | chr1.4:7764125-7764144 | MS.gene058487:CDS | 40.0% | |
GAAAGAGATGAAGCAAGAGT+AGG | - | chr1.4:7764465-7764484 | None:intergenic | 40.0% | |
GATCTGTAAGAAAAATGGGG+AGG | - | chr1.4:7765141-7765160 | None:intergenic | 40.0% | |
GATTCTGTTGTTGAGGTGAT+TGG | - | chr1.4:7765637-7765656 | None:intergenic | 40.0% | |
GCAAACCAACTCAAGAAACA+TGG | + | chr1.4:7765168-7765187 | MS.gene058487:intron | 40.0% | |
GCAGCAATAGCTATTGACAA+AGG | - | chr1.4:7766364-7766383 | None:intergenic | 40.0% | |
GCTAGGATGAATGTAAAAGC+AGG | - | chr1.4:7764498-7764517 | None:intergenic | 40.0% | |
GCTCAGCTCTTTGGATATAA+AGG | + | chr1.4:7764423-7764442 | MS.gene058487:CDS | 40.0% | |
GGAGAATGAATAATAGGTGG+TGG | - | chr1.4:7765616-7765635 | None:intergenic | 40.0% | |
TCAAAGCAGCTACTCAAAAG+GGG | + | chr1.4:7764041-7764060 | MS.gene058487:CDS | 40.0% | |
TTGCAACCATTGCTGTGAAT+GGG | - | chr1.4:7763988-7764007 | None:intergenic | 40.0% | |
TTTGGCCATGTTTCTTGAGT+TGG | - | chr1.4:7765176-7765195 | None:intergenic | 40.0% | |
! | AGTTGTTTGGTTCACACTTG+GGG | + | chr1.4:7766298-7766317 | MS.gene058487:CDS | 40.0% |
! | ATGCAGGGATTCTTTTCTAC+AGG | + | chr1.4:7766271-7766290 | MS.gene058487:intron | 40.0% |
! | GATGGTGAGGGTATGATTAT+TGG | - | chr1.4:7765586-7765605 | None:intergenic | 40.0% |
!!! | AATTTTTAGGTGGGTTGACC+CGG | + | chr1.4:7764971-7764990 | MS.gene058487:intron | 40.0% |
AAGTTCACCCCAAAACTCCA+AGG | - | chr1.4:7764304-7764323 | None:intergenic | 45.0% | |
AGAGTTGTAGCTCAGCTCTT+TGG | + | chr1.4:7764414-7764433 | MS.gene058487:intron | 45.0% | |
AGGCAAAAGGAGAACAAGAG+TGG | - | chr1.4:7764107-7764126 | None:intergenic | 45.0% | |
ATTGGGTCGGGTAATGAGTA+TGG | + | chr1.4:7764832-7764851 | MS.gene058487:intron | 45.0% | |
GCAATAGAGTGCACAAACGT+TGG | + | chr1.4:7764004-7764023 | MS.gene058487:CDS | 45.0% | |
GGCACCTGAAAATGATAGCT+AGG | - | chr1.4:7764515-7764534 | None:intergenic | 45.0% | |
TAAAGAAGGGGAGAGGCAAA+AGG | - | chr1.4:7764120-7764139 | None:intergenic | 45.0% | |
TCTAGGTTTATCGGACGGTA+AGG | + | chr1.4:7765058-7765077 | MS.gene058487:intron | 45.0% | |
! | ATAGGTGGTGGTTGTGTTGA+TGG | - | chr1.4:7765604-7765623 | None:intergenic | 45.0% |
! | GAAATCTGCTCCGATTTGAG+TGG | + | chr1.4:7765206-7765225 | MS.gene058487:intron | 45.0% |
!! | TACCTACCCTGATGGATTGA+CGG | + | chr1.4:7764896-7764915 | MS.gene058487:intron | 45.0% |
!!! | CTTGGTGATGCACTGCATTT+TGG | + | chr1.4:7766403-7766422 | MS.gene058487:CDS | 45.0% |
!!! | AAAAAAAAATAACATTTTTT+CGG | + | chr1.4:7765350-7765369 | MS.gene058487:intron | 5.0% |
!!! | AATAAAACATATTAATTTTT+AGG | + | chr1.4:7764958-7764977 | MS.gene058487:intron | 5.0% |
AACCAGTCCGTCAATCCATC+AGG | - | chr1.4:7764906-7764925 | None:intergenic | 50.0% | |
ACCAGTCCGTCAATCCATCA+GGG | - | chr1.4:7764905-7764924 | None:intergenic | 50.0% | |
TGTGCTCCCATTCACAGCAA+TGG | + | chr1.4:7763979-7763998 | MS.gene058487:CDS | 50.0% | |
!! | GGTGGTTGTGTTGATGGTGA+GGG | - | chr1.4:7765598-7765617 | None:intergenic | 50.0% |
!! | TGGTGGTTGTGTTGATGGTG+AGG | - | chr1.4:7765599-7765618 | None:intergenic | 50.0% |
GTCCGTCAATCCATCAGGGT+AGG | - | chr1.4:7764901-7764920 | None:intergenic | 55.0% | |
!! | ACCCTGATGGATTGACGGAC+TGG | + | chr1.4:7764901-7764920 | MS.gene058487:intron | 55.0% |
!! | GGCTGGGAGGCATTGTTACA+AGG | + | chr1.4:7763955-7763974 | MS.gene058487:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 7763953 | 7766428 | 7763953 | ID=MS.gene058487 |
chr1.4 | mRNA | 7763953 | 7766428 | 7763953 | ID=MS.gene058487.t1;Parent=MS.gene058487 |
chr1.4 | exon | 7763953 | 7764146 | 7763953 | ID=MS.gene058487.t1.exon1;Parent=MS.gene058487.t1 |
chr1.4 | CDS | 7763953 | 7764146 | 7763953 | ID=cds.MS.gene058487.t1;Parent=MS.gene058487.t1 |
chr1.4 | exon | 7764250 | 7764315 | 7764250 | ID=MS.gene058487.t1.exon2;Parent=MS.gene058487.t1 |
chr1.4 | CDS | 7764250 | 7764315 | 7764250 | ID=cds.MS.gene058487.t1;Parent=MS.gene058487.t1 |
chr1.4 | exon | 7764416 | 7764529 | 7764416 | ID=MS.gene058487.t1.exon3;Parent=MS.gene058487.t1 |
chr1.4 | CDS | 7764416 | 7764529 | 7764416 | ID=cds.MS.gene058487.t1;Parent=MS.gene058487.t1 |
chr1.4 | exon | 7765483 | 7765726 | 7765483 | ID=MS.gene058487.t1.exon4;Parent=MS.gene058487.t1 |
chr1.4 | CDS | 7765483 | 7765726 | 7765483 | ID=cds.MS.gene058487.t1;Parent=MS.gene058487.t1 |
chr1.4 | exon | 7765833 | 7765991 | 7765833 | ID=MS.gene058487.t1.exon5;Parent=MS.gene058487.t1 |
chr1.4 | CDS | 7765833 | 7765991 | 7765833 | ID=cds.MS.gene058487.t1;Parent=MS.gene058487.t1 |
chr1.4 | exon | 7766277 | 7766428 | 7766277 | ID=MS.gene058487.t1.exon6;Parent=MS.gene058487.t1 |
chr1.4 | CDS | 7766277 | 7766428 | 7766277 | ID=cds.MS.gene058487.t1;Parent=MS.gene058487.t1 |
Gene Sequence |
Protein sequence |