AlfalfaGEDB | MS.gene058648

M. sativa cultivar XinJiangDaYe / MS.gene058648

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene058648.t1	XP_013449346.1	97.1	278	8	0	1	278	323	600	2.40E-157	564.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene058648.t1	Q9LDD4	41.1	270	134	5	2	251	293	557	1.0e-47	191.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene058648.t1	Q2HUC6	97.1	278	8	0	1	278	323	600	1.7e-157	564.7

TFs/TRs:

Gene ID	Type	Classification
MS.gene058648.t1	TF	MYB-related

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene054823	MS.gene058648	0.90738	5.40E-81	-1.69E-46
MS.gene058646	MS.gene058648	0.932647	6.22E-95	-1.69E-46
MS.gene058648	MS.gene058654	0.884422	1.94E-71	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene058648.t1	MTR_7g078120	97.122	278	8	0	1	278	323	600	0.0	572
MS.gene058648.t1	MTR_7g078120	96.751	277	9	0	1	277	323	599	0.0	567
MS.gene058648.t1	MTR_8g028905	50.190	263	111	6	1	246	333	592	3.61e-76	243
MS.gene058648.t1	MTR_8g098605	42.379	269	137	4	1	256	321	584	2.75e-63	209
MS.gene058648.t1	MTR_8g098645	50.811	185	91	0	65	249	143	327	2.94e-62	200
MS.gene058648.t1	MTR_1g073590	47.396	192	101	0	64	255	381	572	4.18e-60	200
MS.gene058648.t1	MTR_1g073530	46.354	192	103	0	64	255	384	575	9.42e-59	197
MS.gene058648.t1	MTR_8g098635	47.568	185	97	0	72	256	101	285	1.30e-58	189
MS.gene058648.t1	MTR_1g073380	47.120	191	101	0	65	255	395	585	6.09e-58	195
MS.gene058648.t1	MTR_8g098635	47.568	185	97	0	72	256	184	368	1.22e-57	189
MS.gene058648.t1	MTR_3g023780	37.037	189	106	4	56	233	140	326	5.81e-33	126
MS.gene058648.t1	MTR_7g066890	38.182	165	89	3	65	218	194	356	3.28e-32	122
MS.gene058648.t1	MTR_7g066890	38.182	165	89	3	65	218	296	458	2.30e-31	121
MS.gene058648.t1	MTR_6g071350	40.123	162	75	4	1	161	228	368	1.19e-25	105
MS.gene058648.t1	MTR_0259s0060	32.961	179	73	5	65	243	16	147	3.74e-24	95.9
MS.gene058648.t1	MTR_7g066880	30.453	243	150	7	2	228	114	353	2.92e-22	95.1
MS.gene058648.t1	MTR_5g048010	42.553	94	39	1	68	161	205	283	5.71e-17	79.7
MS.gene058648.t1	MTR_1g073420	47.541	61	32	0	195	255	61	121	6.17e-13	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene058648.t1	AT4G11400	49.495	198	93	3	61	256	370	562	4.27e-56	189
MS.gene058648.t1	AT4G11400	49.495	198	93	3	61	256	370	562	4.27e-56	189
MS.gene058648.t1	AT2G46040	43.443	244	100	6	1	233	314	530	4.77e-49	171
MS.gene058648.t1	AT2G46040	43.443	244	100	6	1	233	314	530	4.77e-49	171
MS.gene058648.t1	AT2G46040	43.443	244	100	6	1	233	328	544	5.71e-49	171
MS.gene058648.t1	AT5G04110	40.805	174	91	4	65	227	362	534	7.16e-36	134
MS.gene058648.t1	AT5G04110	40.805	174	91	4	65	227	361	533	8.17e-36	134
MS.gene058648.t1	AT5G04110	40.805	174	91	4	65	227	361	533	8.17e-36	134
MS.gene058648.t1	AT2G03470	38.860	193	101	5	52	233	110	296	1.17e-32	124
MS.gene058648.t1	AT2G03470	38.860	193	101	5	52	233	109	295	1.26e-32	124
MS.gene058648.t1	AT1G13880	35.000	200	110	5	61	247	134	326	1.54e-28	113
MS.gene058648.t1	AT1G13880	35.000	200	110	5	61	247	125	317	1.62e-28	113
MS.gene058648.t1	AT1G13880	35.000	200	110	5	61	247	124	316	1.68e-28	113
MS.gene058648.t1	AT1G26580	35.204	196	108	4	56	233	60	254	4.72e-28	112
MS.gene058648.t1	AT1G26580	35.204	196	108	4	56	233	126	320	7.10e-28	112
MS.gene058648.t1	AT1G26580	35.204	196	108	4	56	233	126	320	7.10e-28	112
MS.gene058648.t1	AT5G04110	40.690	145	74	4	65	198	361	504	1.68e-26	108

Find 72 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTCGCTTGATAGATGTTTC+TGG	0.140839	7.2:+27689039	MS.gene058648:CDS
GTCTAAATTCCACTGGTAAA+AGG	0.214752	7.2:-27688937	None:intergenic
GGCGTTGGCTGTGGCTTCTT+AGG	0.242383	7.2:-27689269	None:intergenic
AAACTTTCCCTGCTCTTCTT+AGG	0.251694	7.2:-27689083	None:intergenic
AATCGTAAAATCCGAACTTT+TGG	0.277183	7.2:+27688791	MS.gene058648:CDS
ATTCGGGCACTTCAGCTTGA+TGG	0.324498	7.2:-27688707	None:intergenic
ACACCATTGAAGGGTGCTTT+TGG	0.331159	7.2:+27689206	MS.gene058648:CDS
GGCACTTCAGCTTGATGGTT+TGG	0.334418	7.2:-27688702	None:intergenic
GCTAGACTCAAGCTGGAAAT+AGG	0.340184	7.2:+27688909	MS.gene058648:CDS
GCGTTGGCTGTGGCTTCTTA+GGG	0.354312	7.2:-27689268	None:intergenic
GTGAGTTGTGCCAGTCCATT+CGG	0.372553	7.2:-27688724	None:intergenic
TCATCACTGTCAATGTTATC+AGG	0.372585	7.2:-27689167	None:intergenic
TTCGCTTGATAGATGTTTCT+GGG	0.372715	7.2:+27689040	MS.gene058648:CDS
AGTGGCTGGGAACTCAAATA+TGG	0.387174	7.2:+27688760	MS.gene058648:CDS
TGGCTTCTTAGGGGATAATA+AGG	0.401536	7.2:-27689258	None:intergenic
TTCATGCCGTTGCCAGGTAC+AGG	0.406356	7.2:+27688845	MS.gene058648:CDS
TATCAGGAGTATGCCTGTTC+TGG	0.414090	7.2:-27689151	None:intergenic
GGGAAGAAGTGAGGCGATGC+TGG	0.415602	7.2:+27688967	MS.gene058648:CDS
GGTGCATCAAGAATTGATTC+TGG	0.415723	7.2:-27688654	None:intergenic
AGGTTCCCCTTCCAAAAGTT+CGG	0.417302	7.2:-27688802	None:intergenic
AACGGATCAAACGTGACAAT+GGG	0.422576	7.2:+27688550	MS.gene058648:CDS
TGAGTTGTGCCAGTCCATTC+GGG	0.426236	7.2:-27688723	None:intergenic
CAAGAGTGATTCTAAGTGGC+TGG	0.427819	7.2:+27688746	MS.gene058648:CDS
ACAATGAAGCTCATGATTTG+AGG	0.438613	7.2:-27689322	None:intergenic
AAACATCTATCAAGCGAAGC+AGG	0.442525	7.2:-27689035	None:intergenic
ATCGGAATTTACACCATTGA+AGG	0.444707	7.2:+27689196	MS.gene058648:CDS
CAACATTTCCTAAGAAGAGC+AGG	0.455515	7.2:+27689075	MS.gene058648:CDS
TTTGTATGTGGCGTTGGCTG+TGG	0.473835	7.2:-27689278	None:intergenic
CCCAAGGTTATCATCATACA+TGG	0.476856	7.2:-27688508	None:intergenic
ACAAGATTCATGCCGTTGCC+AGG	0.482217	7.2:+27688839	MS.gene058648:CDS
TGACAGTGATGATGAAGAAT+CGG	0.482629	7.2:+27689178	MS.gene058648:CDS
TCTTGTCTTCCCTTTCCGAC+AGG	0.485818	7.2:-27688822	None:intergenic
CAGCCAACGCCACATACAAA+AGG	0.491192	7.2:+27689281	MS.gene058648:CDS
CAGTGGAATTTAGACAAAGC+AGG	0.497895	7.2:+27688945	MS.gene058648:CDS
GCTGAAGTGCCCGAATGGAC+TGG	0.499421	7.2:+27688714	MS.gene058648:CDS
AGCGCAGAGGATACCAGAAC+AGG	0.504565	7.2:+27689138	MS.gene058648:CDS
CCATGTATGATGATAACCTT+GGG	0.511627	7.2:+27688508	MS.gene058648:CDS
CTGCTTTGTCTAAATTCCAC+TGG	0.513826	7.2:-27688944	None:intergenic
TAAGATTGTAATTTGTCCCA+AGG	0.519599	7.2:-27688524	None:intergenic
GAAAAGCGCTAGACTCAAGC+TGG	0.525180	7.2:+27688902	MS.gene058648:CDS
CCCACAGTGAATATCCCTCT+CGG	0.526822	7.2:+27688678	MS.gene058648:CDS
TGTCCAAAAGCACCCTTCAA+TGG	0.528458	7.2:-27689209	None:intergenic
GAAGGGGAACCTGTCGGAAA+GGG	0.537473	7.2:+27688813	MS.gene058648:CDS
AAGAATTGATTCTGGAACAC+AGG	0.538056	7.2:-27688646	None:intergenic
AACACCTGATTCCGAAGCTA+AGG	0.538928	7.2:+27688608	MS.gene058648:CDS
ACTCGACAGAACCCTGTACC+TGG	0.548252	7.2:-27688857	None:intergenic
ATCAAGCTGAAGTGCCCGAA+TGG	0.549788	7.2:+27688709	MS.gene058648:CDS
CCACAGTGAATATCCCTCTC+GGG	0.550265	7.2:+27688679	MS.gene058648:CDS
CAACGGATCAAACGTGACAA+TGG	0.554887	7.2:+27688549	MS.gene058648:CDS
GGAAGGGGAACCTGTCGGAA+AGG	0.556040	7.2:+27688812	MS.gene058648:CDS
CGTTGGCTGTGGCTTCTTAG+GGG	0.558699	7.2:-27689267	None:intergenic
CTTGATGGTTTGGCCCGAGA+GGG	0.566622	7.2:-27688692	None:intergenic
CTCACAAGAGTGATTCTAAG+TGG	0.569925	7.2:+27688742	MS.gene058648:CDS
TCCATGTATGATGATAACCT+TGG	0.573234	7.2:+27688507	MS.gene058648:CDS
TCATGCCGTTGCCAGGTACA+GGG	0.583742	7.2:+27688846	MS.gene058648:CDS
AGTGGAATTTAGACAAAGCA+GGG	0.585551	7.2:+27688946	MS.gene058648:CDS
AAGAGTGATTCTAAGTGGCT+GGG	0.587117	7.2:+27688747	MS.gene058648:CDS
CAAATTACAATCTTAGACAA+CGG	0.597787	7.2:+27688532	MS.gene058648:CDS
AACATCTATCAAGCGAAGCA+GGG	0.599897	7.2:-27689034	None:intergenic
TCGGAATTTACACCATTGAA+GGG	0.611362	7.2:+27689197	MS.gene058648:CDS
ACAAAGCAGGGGAAGAAGTG+AGG	0.617748	7.2:+27688958	MS.gene058648:CDS
AGGTTATCATCATACATGGA+AGG	0.619750	7.2:-27688504	None:intergenic
GCTTGATGGTTTGGCCCGAG+AGG	0.620538	7.2:-27688693	None:intergenic
AAAGGAAGACAGCTAGTGCA+TGG	0.624413	7.2:+27689299	MS.gene058648:CDS
AACATTTCCTAAGAAGAGCA+GGG	0.628463	7.2:+27689076	MS.gene058648:CDS
CAGAACCCTGTACCTGGCAA+CGG	0.636700	7.2:-27688851	None:intergenic
CCGAGAGGGATATTCACTGT+GGG	0.648373	7.2:-27688678	None:intergenic
AGAGGGATATTCACTGTGGG+AGG	0.651849	7.2:-27688675	None:intergenic
ACTCAAGCTGGAAATAGGTG+TGG	0.680587	7.2:+27688914	MS.gene058648:CDS
CCCGAGAGGGATATTCACTG+TGG	0.699432	7.2:-27688679	None:intergenic
ACGGATCAAACGTGACAATG+GGG	0.705546	7.2:+27688551	MS.gene058648:CDS
GTGGAATTTAGACAAAGCAG+GGG	0.723671	7.2:+27688947	MS.gene058648:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CAAATTACAATCTTAGACAA+CGG	+	chr7.2:27688532-27688551	MS.gene058648:CDS	25.0%
!	AATCGTAAAATCCGAACTTT+TGG	+	chr7.2:27688791-27688810	MS.gene058648:CDS	30.0%
!	TAAGATTGTAATTTGTCCCA+AGG	-	chr7.2:27688527-27688546	None:intergenic	30.0%
!!	TAAAATCCGAACTTTTGGAA+GGG	+	chr7.2:27688796-27688815	MS.gene058648:CDS	30.0%
	AACATTTCCTAAGAAGAGCA+GGG	+	chr7.2:27689076-27689095	MS.gene058648:CDS	35.0%
	AGGTTATCATCATACATGGA+AGG	-	chr7.2:27688507-27688526	None:intergenic	35.0%
	AGTGGAATTTAGACAAAGCA+GGG	+	chr7.2:27688946-27688965	MS.gene058648:CDS	35.0%
	ATCGGAATTTACACCATTGA+AGG	+	chr7.2:27689196-27689215	MS.gene058648:CDS	35.0%
	CCATGTATGATGATAACCTT+GGG	+	chr7.2:27688508-27688527	MS.gene058648:CDS	35.0%
	GTCTAAATTCCACTGGTAAA+AGG	-	chr7.2:27688940-27688959	None:intergenic	35.0%
	TCATCACTGTCAATGTTATC+AGG	-	chr7.2:27689170-27689189	None:intergenic	35.0%
	TCCATGTATGATGATAACCT+TGG	+	chr7.2:27688507-27688526	MS.gene058648:CDS	35.0%
	TCGGAATTTACACCATTGAA+GGG	+	chr7.2:27689197-27689216	MS.gene058648:CDS	35.0%
	TTCGCTTGATAGATGTTTCT+GGG	+	chr7.2:27689040-27689059	MS.gene058648:CDS	35.0%
!	GAGTAACTTTTCCTTAGCTT+CGG	-	chr7.2:27688622-27688641	None:intergenic	35.0%
!	GTAAAATCCGAACTTTTGGA+AGG	+	chr7.2:27688795-27688814	MS.gene058648:CDS	35.0%
!	TGACAGTGATGATGAAGAAT+CGG	+	chr7.2:27689178-27689197	MS.gene058648:CDS	35.0%
!!	AAAATCCGAACTTTTGGAAG+GGG	+	chr7.2:27688797-27688816	MS.gene058648:CDS	35.0%
!!	AAGAATTGATTCTGGAACAC+AGG	-	chr7.2:27688649-27688668	None:intergenic	35.0%
	AAACATCTATCAAGCGAAGC+AGG	-	chr7.2:27689038-27689057	None:intergenic	40.0%
	AAACTTTCCCTGCTCTTCTT+AGG	-	chr7.2:27689086-27689105	None:intergenic	40.0%
	AACATCTATCAAGCGAAGCA+GGG	-	chr7.2:27689037-27689056	None:intergenic	40.0%
	AACGGATCAAACGTGACAAT+GGG	+	chr7.2:27688550-27688569	MS.gene058648:CDS	40.0%
	AAGAGTGATTCTAAGTGGCT+GGG	+	chr7.2:27688747-27688766	MS.gene058648:CDS	40.0%
	CAACATTTCCTAAGAAGAGC+AGG	+	chr7.2:27689075-27689094	MS.gene058648:CDS	40.0%
	CAGTGGAATTTAGACAAAGC+AGG	+	chr7.2:27688945-27688964	MS.gene058648:CDS	40.0%
	CCCAAGGTTATCATCATACA+TGG	-	chr7.2:27688511-27688530	None:intergenic	40.0%
	CTCACAAGAGTGATTCTAAG+TGG	+	chr7.2:27688742-27688761	MS.gene058648:CDS	40.0%
	CTGCTTTGTCTAAATTCCAC+TGG	-	chr7.2:27688947-27688966	None:intergenic	40.0%
	CTTCGCTTGATAGATGTTTC+TGG	+	chr7.2:27689039-27689058	MS.gene058648:CDS	40.0%
	GTGGAATTTAGACAAAGCAG+GGG	+	chr7.2:27688947-27688966	MS.gene058648:CDS	40.0%
	TGGCTTCTTAGGGGATAATA+AGG	-	chr7.2:27689261-27689280	None:intergenic	40.0%
!	AGCTGTCTTCCTTTTGTATG+TGG	-	chr7.2:27689293-27689312	None:intergenic	40.0%
!	GGTGCATCAAGAATTGATTC+TGG	-	chr7.2:27688657-27688676	None:intergenic	40.0%
!	TCGGATTTTACGATTTGCAG+TGG	-	chr7.2:27688786-27688805	None:intergenic	40.0%
!	TTTTCCTTAGCTTCGGAATC+AGG	-	chr7.2:27688615-27688634	None:intergenic	40.0%
	AAAGGAAGACAGCTAGTGCA+TGG	+	chr7.2:27689299-27689318	MS.gene058648:CDS	45.0%
	AACACCTGATTCCGAAGCTA+AGG	+	chr7.2:27688608-27688627	MS.gene058648:CDS	45.0%
	ACGGATCAAACGTGACAATG+GGG	+	chr7.2:27688551-27688570	MS.gene058648:CDS	45.0%
	ACTCAAGCTGGAAATAGGTG+TGG	+	chr7.2:27688914-27688933	MS.gene058648:CDS	45.0%
	AGGTTCCCCTTCCAAAAGTT+CGG	-	chr7.2:27688805-27688824	None:intergenic	45.0%
	AGTGGCTGGGAACTCAAATA+TGG	+	chr7.2:27688760-27688779	MS.gene058648:CDS	45.0%
	CAACGGATCAAACGTGACAA+TGG	+	chr7.2:27688549-27688568	MS.gene058648:CDS	45.0%
	CAAGAGTGATTCTAAGTGGC+TGG	+	chr7.2:27688746-27688765	MS.gene058648:CDS	45.0%
	GCTAGACTCAAGCTGGAAAT+AGG	+	chr7.2:27688909-27688928	MS.gene058648:CDS	45.0%
!	CTTCCTTTTGTATGTGGCGT+TGG	-	chr7.2:27689287-27689306	None:intergenic	45.0%
!	TATCAGGAGTATGCCTGTTC+TGG	-	chr7.2:27689154-27689173	None:intergenic	45.0%
!!	CGTGACAATGGGGTTTTAGT+TGG	+	chr7.2:27688561-27688580	MS.gene058648:CDS	45.0%
!!	TGTCCAAAAGCACCCTTCAA+TGG	-	chr7.2:27689212-27689231	None:intergenic	45.0%
!!!	ACACCATTGAAGGGTGCTTT+TGG	+	chr7.2:27689206-27689225	MS.gene058648:CDS	45.0%
	ACAAAGCAGGGGAAGAAGTG+AGG	+	chr7.2:27688958-27688977	MS.gene058648:CDS	50.0%
	ACAAGATTCATGCCGTTGCC+AGG	+	chr7.2:27688839-27688858	MS.gene058648:CDS	50.0%
	AGAGGGATATTCACTGTGGG+AGG	-	chr7.2:27688678-27688697	None:intergenic	50.0%
	ATTCGGGCACTTCAGCTTGA+TGG	-	chr7.2:27688710-27688729	None:intergenic	50.0%
	CAGCCAACGCCACATACAAA+AGG	+	chr7.2:27689281-27689300	MS.gene058648:CDS	50.0%
	CCACAGTGAATATCCCTCTC+GGG	+	chr7.2:27688679-27688698	MS.gene058648:CDS	50.0%
	CCCACAGTGAATATCCCTCT+CGG	+	chr7.2:27688678-27688697	MS.gene058648:CDS	50.0%
	CCGAGAGGGATATTCACTGT+GGG	-	chr7.2:27688681-27688700	None:intergenic	50.0%
	GTGAGTTGTGCCAGTCCATT+CGG	-	chr7.2:27688727-27688746	None:intergenic	50.0%
	TCTTGTCTTCCCTTTCCGAC+AGG	-	chr7.2:27688825-27688844	None:intergenic	50.0%
	TGAGTTGTGCCAGTCCATTC+GGG	-	chr7.2:27688726-27688745	None:intergenic	50.0%
!	ATCAAGCTGAAGTGCCCGAA+TGG	+	chr7.2:27688709-27688728	MS.gene058648:CDS	50.0%
!	GGCACTTCAGCTTGATGGTT+TGG	-	chr7.2:27688705-27688724	None:intergenic	50.0%
!	GTCTTTCTTTTGCAGCGCAG+AGG	+	chr7.2:27689125-27689144	MS.gene058648:CDS	50.0%
!	TAGGTGTGGCCTTTTACCAG+TGG	+	chr7.2:27688928-27688947	MS.gene058648:CDS	50.0%
!!	CTTTTGGAAGGGGAACCTGT+CGG	+	chr7.2:27688807-27688826	MS.gene058648:CDS	50.0%
!!	GAAAAGCGCTAGACTCAAGC+TGG	+	chr7.2:27688902-27688921	MS.gene058648:CDS	50.0%
!!	TTTGTATGTGGCGTTGGCTG+TGG	-	chr7.2:27689281-27689300	None:intergenic	50.0%
	ACTCGACAGAACCCTGTACC+TGG	-	chr7.2:27688860-27688879	None:intergenic	55.0%
	AGCGCAGAGGATACCAGAAC+AGG	+	chr7.2:27689138-27689157	MS.gene058648:CDS	55.0%
	CAGAACCCTGTACCTGGCAA+CGG	-	chr7.2:27688854-27688873	None:intergenic	55.0%
	CCCGAGAGGGATATTCACTG+TGG	-	chr7.2:27688682-27688701	None:intergenic	55.0%
	GAAGGGGAACCTGTCGGAAA+GGG	+	chr7.2:27688813-27688832	MS.gene058648:CDS	55.0%
	TCATGCCGTTGCCAGGTACA+GGG	+	chr7.2:27688846-27688865	MS.gene058648:CDS	55.0%
	TTCATGCCGTTGCCAGGTAC+AGG	+	chr7.2:27688845-27688864	MS.gene058648:CDS	55.0%
!	CGTTGGCTGTGGCTTCTTAG+GGG	-	chr7.2:27689270-27689289	None:intergenic	55.0%
!	CTTGATGGTTTGGCCCGAGA+GGG	-	chr7.2:27688695-27688714	None:intergenic	55.0%
!!	GCGTTGGCTGTGGCTTCTTA+GGG	-	chr7.2:27689271-27689290	None:intergenic	55.0%
	GGAAGGGGAACCTGTCGGAA+AGG	+	chr7.2:27688812-27688831	MS.gene058648:CDS	60.0%
	GGGAAGAAGTGAGGCGATGC+TGG	+	chr7.2:27688967-27688986	MS.gene058648:CDS	60.0%
!	GCTGAAGTGCCCGAATGGAC+TGG	+	chr7.2:27688714-27688733	MS.gene058648:CDS	60.0%
!	GCTTGATGGTTTGGCCCGAG+AGG	-	chr7.2:27688696-27688715	None:intergenic	60.0%
!!	GGCGTTGGCTGTGGCTTCTT+AGG	-	chr7.2:27689272-27689291	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.2	gene	27688498	27689334	27688498	ID=MS.gene058648
chr7.2	mRNA	27688498	27689334	27688498	ID=MS.gene058648.t1;Parent=MS.gene058648
chr7.2	exon	27688498	27689334	27688498	ID=MS.gene058648.t1.exon1;Parent=MS.gene058648.t1
chr7.2	CDS	27688498	27689334	27688498	ID=cds.MS.gene058648.t1;Parent=MS.gene058648.t1

Gene Sequence

>MS.gene058648

ATGCATCCTTCCATGTATGATGATAACCTTGGGACAAATTACAATCTTAGACAACGGATCAAACGTGACAATGGGGTTTTAGTTGGAAAATCTGCATCTATCTTGCAAAGAACACCTGATTCCGAAGCTAAGGAAAAGTTACTCGACTCCTGTGTTCCAGAATCAATTCTTGATGCACCTCCCACAGTGAATATCCCTCTCGGGCCAAACCATCAAGCTGAAGTGCCCGAATGGACTGGCACAACTCACAAGAGTGATTCTAAGTGGCTGGGAACTCAAATATGGCCACTGCAAATCGTAAAATCCGAACTTTTGGAAGGGGAACCTGTCGGAAAGGGAAGACAAGATTCATGCCGTTGCCAGGTACAGGGTTCTGTCGAGTGTGTTCGATTTCACATTGCTGAGAAAAGCGCTAGACTCAAGCTGGAAATAGGTGTGGCCTTTTACCAGTGGAATTTAGACAAAGCAGGGGAAGAAGTGAGGCGATGCTGGACAGCTCAAGAAGAGAAAAAGTTCAAAGATGTAGTGAAATCGAACCCTGCTTCGCTTGATAGATGTTTCTGGGACGATATTTTCACAACATTTCCTAAGAAGAGCAGGGAAAGTTTAGTCAGCTACTACTTCAATGTCTTTCTTTTGCAGCGCAGAGGATACCAGAACAGGCATACTCCTGATAACATTGACAGTGATGATGAAGAATCGGAATTTACACCATTGAAGGGTGCTTTTGGACATCAAACTGATAAATCAAACAGCATCACCTTATTATCCCCTAAGAAGCCACAGCCAACGCCACATACAAAAGGAAGACAGCTAGTGCATGGCCTCAAATCATGA

Protein sequence

>MS.gene058648.t1

MHPSMYDDNLGTNYNLRQRIKRDNGVLVGKSASILQRTPDSEAKEKLLDSCVPESILDAPPTVNIPLGPNHQAEVPEWTGTTHKSDSKWLGTQIWPLQIVKSELLEGEPVGKGRQDSCRCQVQGSVECVRFHIAEKSARLKLEIGVAFYQWNLDKAGEEVRRCWTAQEEKKFKDVVKSNPASLDRCFWDDIFTTFPKKSRESLVSYYFNVFLLQRRGYQNRHTPDNIDSDDEESEFTPLKGAFGHQTDKSNSITLLSPKKPQPTPHTKGRQLVHGLKS