AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059308

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059308.t1 MTR_2g088000 96.018 452 17 1 1 452 152 602 0.0 894
MS.gene059308.t1 MTR_4g132430 54.217 415 147 14 1 408 95 473 2.39e-115 347
MS.gene059308.t1 MTR_2g023930 50.688 436 161 14 1 409 125 533 1.04e-110 337
MS.gene059308.t1 MTR_4g049760 46.352 466 205 10 1 444 89 531 7.06e-109 333
MS.gene059308.t1 MTR_4g132430 54.933 375 128 10 39 408 1 339 1.78e-108 325
MS.gene059308.t1 MTR_4g047580 43.816 477 212 11 1 440 81 538 1.12e-107 329
MS.gene059308.t1 MTR_4g049790 44.931 434 192 12 1 413 113 520 4.86e-105 323
MS.gene059308.t1 MTR_3g053330 43.970 398 167 11 18 405 93 444 6.01e-93 289
MS.gene059308.t1 MTR_7g110720 38.824 425 155 13 15 431 93 420 3.36e-74 239
MS.gene059308.t1 MTR_7g110720 51.938 258 80 9 182 431 172 393 8.08e-70 227
MS.gene059308.t1 MTR_2g045360 35.236 403 187 13 16 404 66 408 2.18e-54 187
MS.gene059308.t1 MTR_7g009730 31.120 482 231 18 23 430 45 499 1.57e-47 172
MS.gene059308.t1 MTR_4g094412 42.748 262 124 7 183 419 227 487 1.22e-43 160
MS.gene059308.t1 MTR_4g094412 42.748 262 124 7 183 419 218 478 1.84e-43 159
MS.gene059308.t1 MTR_4g107970 35.917 387 180 12 8 343 60 429 1.49e-40 153
MS.gene059308.t1 MTR_4g107970 37.158 366 162 12 29 343 4 352 9.50e-40 150
MS.gene059308.t1 MTR_5g044695 84.615 65 7 1 165 229 46 107 1.45e-31 117
MS.gene059308.t1 MTR_6g038890 47.799 159 51 6 71 229 92 218 1.74e-31 120
MS.gene059308.t1 MTR_4g007060 30.702 228 101 7 176 402 105 276 1.78e-26 108
MS.gene059308.t1 MTR_4g007060 31.140 228 100 8 176 402 139 310 1.92e-26 109
MS.gene059308.t1 MTR_3g056100 38.122 181 83 5 109 261 297 476 2.80e-25 109
MS.gene059308.t1 MTR_3g056100 38.122 181 83 5 109 261 153 332 2.89e-25 108
MS.gene059308.t1 MTR_5g094430 44.628 121 56 3 151 261 172 291 3.23e-25 107
MS.gene059308.t1 MTR_5g094430 44.628 121 56 3 151 261 194 313 3.50e-25 107
MS.gene059308.t1 MTR_3g056100 39.535 172 80 5 109 261 297 463 7.39e-25 107
MS.gene059308.t1 MTR_3g056100 39.535 172 80 5 109 261 153 319 7.86e-25 106
MS.gene059308.t1 MTR_5g094430 44.628 121 56 3 151 261 306 425 1.05e-24 107
MS.gene059308.t1 MTR_3g031220 54.430 79 35 1 181 259 347 424 2.56e-24 105
MS.gene059308.t1 MTR_3g031220 47.619 63 31 2 199 261 198 258 4.52e-11 65.1
MS.gene059308.t1 MTR_3g009470 37.423 163 77 3 103 261 415 556 3.00e-24 106
MS.gene059308.t1 MTR_3g009470 42.683 82 44 3 200 280 281 360 1.05e-12 70.5
MS.gene059308.t1 MTR_1g013790 39.516 124 62 3 139 259 48 161 5.06e-24 100
MS.gene059308.t1 MTR_1g013760 48.889 90 46 0 184 273 125 214 1.10e-23 100
MS.gene059308.t1 MTR_7g011820 48.454 97 49 1 175 271 386 481 1.25e-23 103
MS.gene059308.t1 MTR_7g011820 52.459 61 27 2 199 259 228 286 7.45e-13 70.9
MS.gene059308.t1 MTR_5g097490 51.724 87 41 1 173 259 226 311 1.30e-23 102
MS.gene059308.t1 MTR_3g106060 52.632 76 36 0 182 257 121 196 2.01e-23 100
MS.gene059308.t1 MTR_5g074400 52.381 84 39 1 178 261 399 481 3.53e-23 102
MS.gene059308.t1 MTR_5g074400 35.714 112 60 4 148 259 202 301 2.03e-11 66.2
MS.gene059308.t1 MTR_4g122530 51.948 77 36 1 183 259 192 267 5.39e-23 100
MS.gene059308.t1 MTR_4g013260 53.165 79 36 1 181 259 318 395 5.46e-23 101
MS.gene059308.t1 MTR_4g013260 40.000 75 42 2 185 259 172 243 1.36e-11 66.6
MS.gene059308.t1 MTR_7g071120 40.000 200 84 8 178 370 303 473 5.73e-23 101
MS.gene059308.t1 MTR_7g109800 46.739 92 42 2 183 274 129 213 1.90e-22 97.4
MS.gene059308.t1 MTR_5g042920 50.617 81 39 1 181 261 302 381 3.28e-22 99.0
MS.gene059308.t1 MTR_5g042920 49.180 61 29 2 199 259 151 209 5.16e-12 67.8
MS.gene059308.t1 MTR_5g043880 47.126 87 45 1 170 256 95 180 7.99e-22 95.5
MS.gene059308.t1 MTR_7g080020 51.250 80 38 1 182 261 476 554 1.26e-21 98.6
MS.gene059308.t1 MTR_7g080020 50.000 60 28 2 200 259 281 338 3.12e-11 66.2
MS.gene059308.t1 MTR_3g104750 46.914 81 42 1 176 256 81 160 1.49e-21 91.7
MS.gene059308.t1 MTR_7g080000 51.250 80 38 1 182 261 415 493 1.60e-21 98.2
MS.gene059308.t1 MTR_7g080000 47.692 65 32 2 195 259 230 292 2.27e-11 66.6
MS.gene059308.t1 MTR_2g033820 49.351 77 38 1 183 259 187 262 1.62e-21 96.3
MS.gene059308.t1 MTR_4g082580 49.383 81 40 1 181 261 260 339 1.81e-21 96.3
MS.gene059308.t1 MTR_4g082580 41.463 82 43 3 199 279 145 222 1.81e-11 65.9
MS.gene059308.t1 MTR_1g015140 50.685 73 35 1 184 256 87 158 4.32e-21 90.1
MS.gene059308.t1 MTR_1g086790 40.000 115 65 2 183 294 142 255 1.28e-20 92.8
MS.gene059308.t1 MTR_7g028415 50.704 71 34 1 188 258 82 151 1.55e-20 89.0
MS.gene059308.t1 MTR_7g028710 50.704 71 34 1 188 258 82 151 1.55e-20 89.0
MS.gene059308.t1 MTR_2g105060 30.085 236 87 9 177 402 142 309 1.90e-20 92.0
MS.gene059308.t1 MTR_2g105060 30.085 236 87 9 177 402 67 234 1.92e-20 90.5
MS.gene059308.t1 MTR_4g094588 51.351 74 35 1 186 259 165 237 4.75e-20 91.3
MS.gene059308.t1 MTR_1g009613 47.561 82 43 0 183 264 246 327 7.18e-20 90.9
MS.gene059308.t1 MTR_3g095080 42.708 96 53 2 182 277 127 220 9.27e-20 88.2
MS.gene059308.t1 MTR_3g095080 46.067 89 46 2 182 270 151 237 1.09e-19 88.6
MS.gene059308.t1 MTR_4g130900 50.649 77 37 1 183 259 343 418 3.68e-19 90.1
MS.gene059308.t1 MTR_7g100510 43.529 85 47 1 175 259 337 420 3.77e-19 89.7
MS.gene059308.t1 MTR_7g100510 50.000 60 28 2 200 259 190 247 1.18e-11 66.6
MS.gene059308.t1 MTR_7g079010 46.250 80 42 1 177 256 119 197 4.56e-19 85.9
MS.gene059308.t1 MTR_8g092140 45.556 90 46 3 182 270 142 229 6.19e-19 85.9
MS.gene059308.t1 MTR_8g096730 40.659 91 53 1 172 262 43 132 9.63e-19 83.2
MS.gene059308.t1 MTR_8g087000 54.930 71 31 1 190 259 67 137 9.96e-19 85.9
MS.gene059308.t1 MTR_8g087000 54.930 71 31 1 190 259 66 136 1.17e-18 85.5
MS.gene059308.t1 MTR_5g091390 48.649 74 37 1 186 259 144 216 1.26e-18 86.7
MS.gene059308.t1 MTR_8g007270 47.368 76 39 1 182 257 137 211 1.86e-18 84.3
MS.gene059308.t1 MTR_4g094908 46.835 79 42 0 183 261 250 328 3.33e-18 85.9
MS.gene059308.t1 MTR_1g070455 47.436 78 41 0 183 260 277 354 3.67e-18 85.9
MS.gene059308.t1 MTR_8g092010 44.595 74 40 1 186 259 95 167 4.56e-18 82.4
MS.gene059308.t1 MTR_2g016770 54.839 62 28 0 199 260 35 96 5.54e-18 82.8
MS.gene059308.t1 MTR_5g016610 47.368 76 40 0 183 258 183 258 5.70e-18 84.0
MS.gene059308.t1 MTR_2g016770 54.839 62 28 0 199 260 27 88 8.17e-18 82.0
MS.gene059308.t1 MTR_2g083870 51.429 70 34 0 190 259 71 140 1.02e-17 83.2
MS.gene059308.t1 MTR_4g127040 48.000 75 39 0 183 257 229 303 1.09e-17 84.0
MS.gene059308.t1 MTR_7g109600 38.384 99 55 1 169 261 17 115 1.32e-17 82.8
MS.gene059308.t1 MTR_2g024350 35.714 140 80 2 194 323 3 142 4.48e-17 80.5
MS.gene059308.t1 MTR_3g095040 45.946 74 39 1 186 259 105 177 6.76e-17 79.3
MS.gene059308.t1 MTR_3g108960 45.946 74 40 0 183 256 298 371 3.06e-16 80.9
MS.gene059308.t1 MTR_7g062220 34.810 158 92 5 115 263 32 187 6.33e-16 79.0
MS.gene059308.t1 MTR_1g077780 44.304 79 43 1 183 261 46 123 7.82e-16 74.7
MS.gene059308.t1 MTR_2g024380 44.156 77 43 0 194 270 246 322 8.58e-16 79.7
MS.gene059308.t1 MTR_0117s0040 47.887 71 37 0 186 256 61 131 2.03e-15 76.3
MS.gene059308.t1 MTR_1g099600 40.426 94 54 1 196 289 182 273 2.68e-15 77.0
MS.gene059308.t1 MTR_2g032030 51.667 60 29 0 200 259 268 327 4.07e-15 77.8
MS.gene059308.t1 MTR_6g086555 36.774 155 79 6 123 259 113 266 4.34e-15 77.4
MS.gene059308.t1 MTR_8g028565 50.000 64 32 0 196 259 152 215 5.24e-15 76.3
MS.gene059308.t1 MTR_2g032030 50.820 61 30 0 199 259 267 327 6.68e-15 76.6
MS.gene059308.t1 MTR_7g079040 42.683 82 35 1 190 259 133 214 1.76e-14 74.7
MS.gene059308.t1 MTR_4g007060 44.262 61 34 0 176 236 139 199 5.29e-14 72.0
MS.gene059308.t1 MTR_3g090860 48.684 76 32 2 186 254 115 190 8.77e-14 72.8
MS.gene059308.t1 MTR_1g078260 42.466 73 40 2 186 257 234 305 1.03e-13 73.6
MS.gene059308.t1 MTR_3g009470 42.683 82 44 3 200 280 281 360 3.59e-13 71.6
MS.gene059308.t1 MTR_8g098945 45.161 62 34 0 198 259 128 189 8.57e-13 68.9
MS.gene059308.t1 MTR_7g073380 34.579 107 67 2 175 278 98 204 1.15e-12 68.9
MS.gene059308.t1 MTR_7g073430 36.449 107 65 2 175 278 97 203 2.09e-12 67.8
MS.gene059308.t1 MTR_8g027860 36.207 116 56 4 157 254 78 193 2.36e-12 68.6
MS.gene059308.t1 MTR_5g067680 53.448 58 25 1 200 255 203 260 2.99e-12 68.2
MS.gene059308.t1 MTR_2g075680 40.541 74 42 1 183 254 132 205 1.28e-11 65.9
MS.gene059308.t1 MTR_3g031220 47.619 63 31 2 199 261 198 258 2.07e-11 65.9
MS.gene059308.t1 MTR_5g097500 36.782 87 54 1 173 259 204 289 3.47e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059308.t1 AT1G62300 48.753 441 179 9 1 421 139 552 3.50e-116 352
MS.gene059308.t1 AT4G04450 48.210 419 193 10 1 405 1 409 1.44e-103 315
MS.gene059308.t1 AT4G04450 48.210 419 193 10 1 405 95 503 4.20e-102 315
MS.gene059308.t1 AT4G22070 48.747 439 172 11 2 405 94 514 5.67e-93 291
MS.gene059308.t1 AT4G22070 48.747 439 172 11 2 405 94 514 5.67e-93 291
MS.gene059308.t1 AT4G22070 48.747 439 172 11 2 405 94 514 5.67e-93 291
MS.gene059308.t1 AT4G22070 48.747 439 172 11 2 405 94 514 5.67e-93 291
MS.gene059308.t1 AT4G01720 40.580 414 171 13 7 402 87 443 4.14e-68 225
MS.gene059308.t1 AT5G15130 32.809 445 230 16 18 407 35 465 5.57e-51 181
MS.gene059308.t1 AT5G15130 32.494 437 226 16 26 407 1 423 3.68e-49 175
MS.gene059308.t1 AT1G68150 38.849 278 113 9 22 292 97 324 1.21e-46 165
MS.gene059308.t1 AT1G18860 37.748 302 122 6 182 418 222 522 3.62e-43 159
MS.gene059308.t1 AT1G69810 33.739 329 187 9 18 334 25 334 2.57e-39 146
MS.gene059308.t1 AT1G69810 45.604 182 92 4 155 334 100 276 5.26e-38 141
MS.gene059308.t1 AT2G38470 44.628 121 65 2 181 301 344 462 3.87e-26 111
MS.gene059308.t1 AT2G38470 48.333 60 29 2 200 259 185 242 4.38e-11 65.5
MS.gene059308.t1 AT1G80840 30.603 232 98 7 176 402 118 291 1.17e-24 103
MS.gene059308.t1 AT4G26640 55.128 78 34 1 182 259 188 264 1.48e-24 105
MS.gene059308.t1 AT4G26640 55.128 78 34 1 182 259 188 264 1.48e-24 105
MS.gene059308.t1 AT4G26640 55.128 78 34 1 182 259 188 264 1.48e-24 105
MS.gene059308.t1 AT4G26640 55.128 78 34 1 182 259 188 264 1.48e-24 105
MS.gene059308.t1 AT4G26640 55.128 78 34 1 182 259 324 400 2.96e-24 105
MS.gene059308.t1 AT4G26640 55.128 78 34 1 182 259 292 368 3.14e-24 105
MS.gene059308.t1 AT4G26640 55.128 78 34 1 182 259 364 440 4.04e-24 105
MS.gene059308.t1 AT2G04880 47.674 86 44 1 178 263 262 346 1.67e-23 103
MS.gene059308.t1 AT2G04880 33.103 145 84 5 187 323 92 231 2.95e-11 65.9
MS.gene059308.t1 AT2G04880 47.674 86 44 1 178 263 286 370 2.41e-23 102
MS.gene059308.t1 AT2G04880 40.964 83 40 3 187 262 92 172 7.34e-11 64.7
MS.gene059308.t1 AT5G07100 41.880 117 61 3 147 259 87 200 3.13e-23 97.8
MS.gene059308.t1 AT5G07100 41.880 117 61 3 147 259 87 200 3.13e-23 97.8
MS.gene059308.t1 AT5G07100 41.880 117 61 3 147 259 87 200 3.13e-23 97.8
MS.gene059308.t1 AT5G07100 41.880 117 61 3 147 259 87 200 3.13e-23 97.8
MS.gene059308.t1 AT1G13960 53.165 79 36 1 181 259 391 468 4.79e-23 102
MS.gene059308.t1 AT1G13960 49.180 61 29 2 199 259 229 287 3.18e-12 68.9
MS.gene059308.t1 AT1G13960 53.165 79 36 1 181 259 238 315 5.58e-23 100
MS.gene059308.t1 AT1G13960 49.180 61 29 2 199 259 76 134 5.87e-12 67.4
MS.gene059308.t1 AT5G07100 40.625 128 66 4 136 259 172 293 5.97e-23 99.4
MS.gene059308.t1 AT1G29860 39.706 136 71 4 183 308 120 254 1.22e-22 97.8
MS.gene059308.t1 AT5G56270 53.750 80 36 1 182 261 470 548 1.32e-22 101
MS.gene059308.t1 AT5G56270 49.180 61 29 2 200 260 274 332 5.12e-11 65.5
MS.gene059308.t1 AT4G31800 58.462 65 27 0 198 262 110 174 2.05e-22 96.3
MS.gene059308.t1 AT2G25000 42.708 96 55 0 168 263 72 167 2.06e-22 95.9
MS.gene059308.t1 AT2G25000 42.708 96 55 0 168 263 72 167 2.06e-22 95.9
MS.gene059308.t1 AT2G25000 42.708 96 55 0 168 263 94 189 2.09e-22 96.3
MS.gene059308.t1 AT4G31800 58.462 65 27 0 198 262 175 239 2.35e-22 97.4
MS.gene059308.t1 AT5G49520 49.351 77 38 1 183 259 205 280 2.75e-22 99.0
MS.gene059308.t1 AT5G26170 50.685 73 35 1 185 257 99 170 3.22e-22 93.6
MS.gene059308.t1 AT2G25000 42.708 96 55 0 168 263 115 210 3.26e-22 96.3
MS.gene059308.t1 AT2G03340 48.276 87 44 1 175 261 391 476 6.72e-22 98.6
MS.gene059308.t1 AT2G03340 49.180 61 29 2 199 259 250 308 1.56e-12 69.7
MS.gene059308.t1 AT4G18170 51.948 77 36 1 183 259 156 231 3.16e-21 94.4
MS.gene059308.t1 AT1G69310 44.944 89 45 2 171 256 116 203 5.74e-21 93.2
MS.gene059308.t1 AT1G69310 44.944 89 45 2 171 256 116 203 5.74e-21 93.2
MS.gene059308.t1 AT1G69310 44.944 89 45 2 171 256 116 203 5.74e-21 93.2
MS.gene059308.t1 AT3G01080 46.512 86 45 1 174 259 319 403 6.55e-21 95.5
MS.gene059308.t1 AT3G01080 46.512 86 45 1 174 259 281 365 6.86e-21 95.1
MS.gene059308.t1 AT2G47260 50.649 77 37 1 183 259 158 233 1.18e-20 93.2
MS.gene059308.t1 AT2G30250 50.000 80 39 1 182 261 311 389 2.18e-20 93.2
MS.gene059308.t1 AT4G26440 50.633 79 38 1 183 261 356 433 2.34e-20 94.4
MS.gene059308.t1 AT4G26440 50.000 62 29 2 199 260 178 237 1.12e-12 70.5
MS.gene059308.t1 AT3G01970 51.351 74 35 1 185 258 51 123 2.71e-20 87.4
MS.gene059308.t1 AT5G41570 50.000 82 39 2 176 256 74 154 6.88e-20 87.4
MS.gene059308.t1 AT1G64000 41.748 103 55 2 174 276 89 186 7.43e-20 87.8
MS.gene059308.t1 AT5G46350 50.000 74 36 1 186 259 170 242 8.07e-20 90.5
MS.gene059308.t1 AT4G39410 47.368 76 39 1 182 257 206 280 2.85e-19 88.6
MS.gene059308.t1 AT5G13080 50.685 73 35 1 186 258 54 125 3.05e-19 84.3
MS.gene059308.t1 AT1G55600 43.820 89 49 1 173 261 281 368 3.51e-19 90.1
MS.gene059308.t1 AT4G30935 50.649 77 37 1 183 259 315 390 4.04e-19 90.1
MS.gene059308.t1 AT2G46130 48.718 78 39 1 179 256 10 86 6.57e-19 82.4
MS.gene059308.t1 AT2G23320 57.627 59 25 0 200 258 241 299 1.24e-18 87.0
MS.gene059308.t1 AT4G24240 50.000 76 38 0 183 258 265 340 1.61e-18 87.0
MS.gene059308.t1 AT3G62340 50.000 78 38 1 186 263 105 181 2.39e-18 85.5
MS.gene059308.t1 AT2G44745 46.667 75 39 1 182 256 128 201 3.25e-18 83.6
MS.gene059308.t1 AT2G24570 50.000 74 37 0 183 256 227 300 3.59e-18 85.5
MS.gene059308.t1 AT5G28650 49.383 81 35 2 183 257 240 320 3.85e-18 85.5
MS.gene059308.t1 AT2G30590 48.352 91 40 3 180 263 288 378 3.86e-18 86.3
MS.gene059308.t1 AT5G64810 47.887 71 36 1 186 256 97 166 7.97e-18 82.0
MS.gene059308.t1 AT4G31550 48.649 74 38 0 183 256 230 303 9.74e-18 84.3
MS.gene059308.t1 AT4G31550 48.649 74 38 0 183 256 229 302 9.99e-18 84.3
MS.gene059308.t1 AT1G29280 47.143 70 37 0 190 259 65 134 1.45e-17 82.8
MS.gene059308.t1 AT3G04670 48.148 81 36 2 183 257 240 320 2.24e-17 83.6
MS.gene059308.t1 AT2G37260 49.333 75 34 2 194 265 262 335 1.06e-16 81.6
MS.gene059308.t1 AT2G37260 48.438 64 31 2 200 263 84 145 3.54e-13 70.9
MS.gene059308.t1 AT2G37260 49.333 75 34 2 194 265 264 337 1.07e-16 81.6
MS.gene059308.t1 AT2G37260 48.438 64 31 2 200 263 86 147 3.55e-13 70.9
MS.gene059308.t1 AT2G37260 49.333 75 34 2 194 265 344 417 1.82e-16 81.6
MS.gene059308.t1 AT2G37260 48.438 64 31 2 200 263 166 227 5.09e-13 71.2
MS.gene059308.t1 AT3G58710 43.820 89 49 1 172 259 42 130 2.99e-16 79.0
MS.gene059308.t1 AT3G58710 43.820 89 49 1 172 259 43 131 3.00e-16 79.0
MS.gene059308.t1 AT5G52830 50.746 67 33 0 193 259 159 225 5.81e-16 79.3
MS.gene059308.t1 AT1G69310 39.216 102 54 3 158 256 103 199 6.10e-16 78.6
MS.gene059308.t1 AT4G01250 37.143 105 53 1 199 290 128 232 6.48e-16 78.6
MS.gene059308.t1 AT4G23550 48.485 66 34 0 194 259 135 200 1.13e-15 78.2
MS.gene059308.t1 AT2G34830 44.737 76 41 1 185 259 200 275 2.70e-15 78.2
MS.gene059308.t1 AT1G30650 44.737 76 41 1 185 259 202 277 3.28e-15 77.8
MS.gene059308.t1 AT2G34830 44.737 76 41 1 185 259 209 284 3.43e-15 77.8
MS.gene059308.t1 AT5G43290 40.698 86 48 3 180 263 93 177 6.18e-15 75.5
MS.gene059308.t1 AT2G46130 44.872 78 38 2 179 256 10 82 6.30e-14 68.2
MS.gene059308.t1 AT4G31800 61.538 39 15 0 198 236 175 213 2.04e-12 67.4
MS.gene059308.t1 AT2G46400 41.772 79 44 1 178 254 83 161 2.94e-12 67.8
MS.gene059308.t1 AT2G21900 40.909 66 38 1 194 259 104 168 6.55e-12 65.1
MS.gene059308.t1 AT5G45050 47.541 61 32 0 199 259 1152 1212 7.24e-12 68.6
MS.gene059308.t1 AT5G45050 47.541 61 32 0 199 259 1180 1240 7.28e-12 68.6
MS.gene059308.t1 AT5G45050 47.541 61 32 0 199 259 1041 1101 7.67e-12 68.2
MS.gene059308.t1 AT3G01080 49.180 61 29 2 199 259 205 263 3.01e-11 65.1

Find 95 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGTTCCAAGACAATTTA+TGG 0.128951 2.2:-11253329 MS.gene059308:CDS
ATTGCTCTTGTGAGGTAATT+TGG 0.146915 2.2:+11250862 None:intergenic
TTTGACTGATCTTGACTTCT+TGG 0.186141 2.2:+11253265 None:intergenic
GGTTATTAGGGAACTGGTTT+TGG 0.212904 2.2:+11250755 None:intergenic
CTGCTATTACTTCAATTATT+GGG 0.212910 2.2:-11250534 MS.gene059308:CDS
GCTGCTATTACTTCAATTAT+TGG 0.246668 2.2:-11250535 MS.gene059308:CDS
CTTGATGAGGAGAAACAAAA+TGG 0.281238 2.2:-11253364 MS.gene059308:CDS
AAATGGGAATGGTGGAGTTT+TGG 0.297182 2.2:-11253347 MS.gene059308:CDS
TTGCTCTTGTGAGGTAATTT+GGG 0.310844 2.2:+11250863 None:intergenic
CTAGTACCGTTATTATTGTT+TGG 0.316751 2.2:+11250502 None:intergenic
TTTGGTTTGGTGACTGAGTT+AGG 0.325584 2.2:+11250773 None:intergenic
AGGGAAATTGGAACTGGTTA+GGG 0.327267 2.2:+11250731 None:intergenic
ACATGCTTGATGAGGGTAAT+AGG 0.328005 2.2:-11253483 MS.gene059308:CDS
GTTGCTATGCTTGAAGAATA+AGG 0.353526 2.2:+11250835 None:intergenic
AATAACGGTACTAGCAATAA+TGG 0.353919 2.2:-11250493 MS.gene059308:CDS
GGGAAATTGGAACTGGTTAG+GGG 0.369219 2.2:+11250732 None:intergenic
GCTAAAGCTGCAGTGAAGTT+AGG 0.387680 2.2:+11250559 None:intergenic
CCAAGACAATTTATGGAGCT+TGG 0.403211 2.2:-11253322 MS.gene059308:CDS
AAGGGAAATTGGAACTGGTT+AGG 0.406882 2.2:+11250730 None:intergenic
GGATGTCAATGGAGAAAGTA+TGG 0.409848 2.2:-11252906 MS.gene059308:CDS
TGCTATGTCTTCCTCCATCA+TGG 0.419633 2.2:+11253700 None:intergenic
TATCGATGCACCATGGCCTT+AGG 0.425405 2.2:-11252843 MS.gene059308:CDS
GAAATTGGAACTGGTTAGGG+GGG 0.429542 2.2:+11250734 None:intergenic
GAGGGAAGGGAAATTGGAAC+TGG 0.429543 2.2:+11250725 None:intergenic
TAGCTACTCTACTGAGGAGT+TGG 0.431709 2.2:+11250390 None:intergenic
TGTACCATTTCCATAGCTGC+TGG 0.431979 2.2:+11250952 None:intergenic
TGCTTTGCCTCCAGCAGCTA+TGG 0.435611 2.2:-11250962 MS.gene059308:CDS
GCTTGTTCAACATTTGTTTG+AGG 0.439934 2.2:+11253085 None:intergenic
AGTCCATCAGCACTTGTCAT+TGG 0.447523 2.2:+11250892 None:intergenic
TCCAATGTAACAGTTGGAAA+TGG 0.451153 2.2:+11250796 None:intergenic
AGACACAAGTTCTTCAACCT+TGG 0.451540 2.2:+11253213 None:intergenic
CGATAATAAGCTCGAGGACA+CGG 0.453138 2.2:+11252861 None:intergenic
ACAATAGCTAACAACACTAA+TGG 0.455086 2.2:-11250463 MS.gene059308:CDS
TCCATTTCCAACTGTTACAT+TGG 0.455513 2.2:-11250797 MS.gene059308:CDS
GCCTCCAGCAGCTATGGAAA+TGG 0.457149 2.2:-11250956 MS.gene059308:CDS
ACAATTTATGGAGCTTGGAT+TGG 0.459747 2.2:-11253317 MS.gene059308:CDS
GGAAATTGGAACTGGTTAGG+GGG 0.470023 2.2:+11250733 None:intergenic
CACCTTCATTCTCTCAAGCT+CGG 0.471926 2.2:+11253525 None:intergenic
CCAAGCTCCATAAATTGTCT+TGG 0.475471 2.2:+11253322 None:intergenic
GAAGAGCAAAAGCAAGTGAT+TGG 0.479656 2.2:-11253394 MS.gene059308:CDS
AACCCTTGCTTTCCTCATAG+TGG 0.482051 2.2:+11253057 None:intergenic
GCAGATGCATTGGATGAGTA+TGG 0.482506 2.2:-11253446 MS.gene059308:CDS
TGAAAAGAAGGAATCCGATC+GGG 0.482638 2.2:-11253185 MS.gene059308:CDS
TGCTATTACTTCAATTATTG+GGG 0.494301 2.2:-11250533 MS.gene059308:CDS
TGTGTCTGATCATGAAAAGA+AGG 0.508518 2.2:-11253197 MS.gene059308:CDS
GCAGCTAAAACTCGATCTGC+AGG 0.523186 2.2:+11253142 None:intergenic
GCTGCAAGAATGTTGCTGTC+AGG 0.523499 2.2:-11250916 MS.gene059308:CDS
AGGTTGTCCTGTGAGAAAAC+AGG 0.526028 2.2:-11252823 MS.gene059308:intron
AGCTCGATCCGAGGCTAACA+TGG 0.526714 2.2:-11253026 MS.gene059308:intron
ATACTTATCACAACATATGA+AGG 0.527047 2.2:-11250997 MS.gene059308:CDS
AGCTACTCTACTGAGGAGTT+GGG 0.528777 2.2:+11250391 None:intergenic
GATAATAAGCTCGAGGACAC+GGG 0.530098 2.2:+11252862 None:intergenic
ACAACACATTGCAGATGCAT+TGG 0.536029 2.2:-11253456 MS.gene059308:CDS
GAGAAAGTATGGACAGAAGA+TGG 0.537071 2.2:-11252895 MS.gene059308:CDS
GGACCAATGACAAGTGCTGA+TGG 0.540715 2.2:-11250895 MS.gene059308:CDS
TTGATGAGGAGAAACAAAAT+GGG 0.547963 2.2:-11253363 MS.gene059308:CDS
GAGAAACAAAATGGGAATGG+TGG 0.550957 2.2:-11253355 MS.gene059308:CDS
CATAATTTGCACAGGTACAA+AGG 0.556634 2.2:-11251038 MS.gene059308:intron
AGATCAATGATGGATGTCAA+TGG 0.557548 2.2:-11252917 MS.gene059308:CDS
CTGAGGAACATGCTTGATGA+GGG 0.560805 2.2:-11253490 MS.gene059308:CDS
GAGTATGGTGCAAGACAAGA+AGG 0.561536 2.2:-11253431 MS.gene059308:CDS
GAGCAAAAGCAAGTGATTGG+TGG 0.565607 2.2:-11253391 MS.gene059308:CDS
GTTAGGTCCAATGTAACAGT+TGG 0.567146 2.2:+11250790 None:intergenic
ATGAAAAGAAGGAATCCGAT+CGG 0.570044 2.2:-11253186 MS.gene059308:CDS
AGGCCACTATGAGGAAAGCA+AGG 0.570684 2.2:-11253060 MS.gene059308:CDS
ACATCAAGTAACAATACCAT+TGG 0.571515 2.2:-11250433 MS.gene059308:CDS
TAACAATGAGGAAGATTCCA+AGG 0.572334 2.2:-11253230 MS.gene059308:CDS
GCACAGCCAAACAATAATAA+CGG 0.583839 2.2:-11250508 MS.gene059308:CDS
CACAGGACAACCTAAGGCCA+TGG 0.587201 2.2:+11252833 None:intergenic
CTATGCTTGAAGAATAAGGA+AGG 0.594569 2.2:+11250839 None:intergenic
GGTGCAAGACAAGAAGGTAG+AGG 0.597094 2.2:-11253425 MS.gene059308:CDS
GAAGTGTACCATGTTAGCCT+CGG 0.600264 2.2:+11253018 None:intergenic
TTGCATTAACTGTGTCAGCA+AGG 0.606728 2.2:+11250593 None:intergenic
AACAAGCTGAGGCCACTATG+AGG 0.607043 2.2:-11253069 MS.gene059308:CDS
ACTGAGGAACATGCTTGATG+AGG 0.611969 2.2:-11253491 MS.gene059308:CDS
AGCCGAGCTTGAGAGAATGA+AGG 0.613065 2.2:-11253527 MS.gene059308:CDS
AACAAATGTTGAACAAGCTG+AGG 0.613373 2.2:-11253080 MS.gene059308:CDS
AAGGAAGGATTGCTCTTGTG+AGG 0.621106 2.2:+11250854 None:intergenic
CGAGCTTGAGAGAATGAAGG+TGG 0.635577 2.2:-11253524 MS.gene059308:CDS
ACCATTTCCATAGCTGCTGG+AGG 0.637423 2.2:+11250955 None:intergenic
GAGGAGAAACAAAATGGGAA+TGG 0.637776 2.2:-11253358 MS.gene059308:CDS
TATGGACAGAAGATGGCGAA+AGG 0.642826 2.2:-11252888 MS.gene059308:CDS
CAATGATCAATCCATGATGG+AGG 0.645307 2.2:-11253711 None:intergenic
AGACAAAAGAGCTAAGCTTG+AGG 0.649723 2.2:-11253666 MS.gene059308:intron
TTCAGTTAGAGCTCGATCCG+AGG 0.654330 2.2:-11253035 MS.gene059308:CDS
GGCCACTATGAGGAAAGCAA+GGG 0.654709 2.2:-11253059 MS.gene059308:CDS
ATTACTTGCAAATAACAATG+AGG 0.658433 2.2:-11253242 MS.gene059308:CDS
AGCTTATTATCGATGCACCA+TGG 0.661870 2.2:-11252850 MS.gene059308:CDS
GAAAAGAAGGAATCCGATCG+GGG 0.662543 2.2:-11253184 MS.gene059308:CDS
ACTGTGTCAGCAAGGTTCTG+TGG 0.667152 2.2:+11250601 None:intergenic
GATTGGTGGAAAACTTGATG+AGG 0.667331 2.2:-11253377 MS.gene059308:CDS
GTGCATCGATAATAAGCTCG+AGG 0.678750 2.2:+11252855 None:intergenic
GTGGGCTAGCTACTCTACTG+AGG 0.703692 2.2:+11250384 None:intergenic
AGGTGGAGAATCATCAACTG+AGG 0.706865 2.2:-11253507 MS.gene059308:CDS
AATGTCTGACCAAATACCTG+AGG 0.730527 2.2:+11250691 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCAAAAATAAAATGAAAT+TGG + chr2.2:11252321-11252340 None:intergenic 10.0%
!! AATAAAGACAAAAGATAATT+TGG - chr2.2:11252117-11252136 MS.gene059308:intron 15.0%
!! CATCTTAAAAATAAAAATGA+CGG + chr2.2:11252294-11252313 None:intergenic 15.0%
!!! AACTTTCTTTATAAACATTT+TGG - chr2.2:11252556-11252575 MS.gene059308:intron 15.0%
!!! GTCATTTTTATTTTTAAGAT+GGG - chr2.2:11252293-11252312 MS.gene059308:intron 15.0%
!!! TAATTTCGATAAACTTTTTT+AGG + chr2.2:11252665-11252684 None:intergenic 15.0%
!!! TAATTTCTATAAACTTTTTC+AGG + chr2.2:11251725-11251744 None:intergenic 15.0%
!! AAAAGATAATTTGGACATTA+GGG - chr2.2:11252126-11252145 MS.gene059308:intron 20.0%
!! AAGTTGAAATTCACTTATTA+TGG + chr2.2:11252541-11252560 None:intergenic 20.0%
!! AGTTGAAATTCACTTATTAT+GGG + chr2.2:11252540-11252559 None:intergenic 20.0%
!! TAAATGTTAGCTATAATAGT+CGG - chr2.2:11251305-11251324 MS.gene059308:intron 20.0%
!! TATACAAACACGTTTAAAAA+AGG + chr2.2:11252457-11252476 None:intergenic 20.0%
!! TGTTTATATTGTCATTAAAC+TGG - chr2.2:11251983-11252002 MS.gene059308:intron 20.0%
!! TTTAAACGTGTTTGTATAAA+TGG - chr2.2:11252459-11252478 MS.gene059308:intron 20.0%
!!! CGTCATTTTTATTTTTAAGA+TGG - chr2.2:11252292-11252311 MS.gene059308:intron 20.0%
!!! CTGTTTTATATTGACTTATT+TGG + chr2.2:11251821-11251840 None:intergenic 20.0%
!!! GTTACTGTAGTTTAATATTT+TGG + chr2.2:11251867-11251886 None:intergenic 20.0%
!!! TAACTTTTTATTTAGAGCTT+AGG - chr2.2:11252345-11252364 MS.gene059308:intron 20.0%
!!! TAATTCGGGTTTTATAAAAA+TGG + chr2.2:11252983-11253002 None:intergenic 20.0%
!!! TTATATCTTCCATTTTATTC+TGG + chr2.2:11251939-11251958 None:intergenic 20.0%
!!! TTTCTTTATAAACATTTTGG+TGG - chr2.2:11252559-11252578 MS.gene059308:intron 20.0%
! AAAGACTTATGAGACTATTT+GGG + chr2.2:11251782-11251801 None:intergenic 25.0%
! AAAGATAATTTGGACATTAG+GGG - chr2.2:11252127-11252146 MS.gene059308:intron 25.0%
! ACGTTTAAAAAAGGTAGAAA+AGG + chr2.2:11252448-11252467 None:intergenic 25.0%
! ATACTTATCACAACATATGA+AGG - chr2.2:11253094-11253113 MS.gene059308:CDS 25.0%
! ATCAAAAAAATTGAGCAATG+TGG + chr2.2:11252181-11252200 None:intergenic 25.0%
! ATTACTTGCAAATAACAATG+AGG - chr2.2:11250849-11250868 MS.gene059308:CDS 25.0%
! CAAAAGATAATTTGGACATT+AGG - chr2.2:11252125-11252144 MS.gene059308:intron 25.0%
! CAATAATATCCAATCAATCA+TGG - chr2.2:11251535-11251554 MS.gene059308:intron 25.0%
! CTGCTATTACTTCAATTATT+GGG - chr2.2:11253557-11253576 MS.gene059308:intron 25.0%
! GTTGAAATTCACTTATTATG+GGG + chr2.2:11252539-11252558 None:intergenic 25.0%
! TAAAACTGTTTATCCAAACA+TGG + chr2.2:11251595-11251614 None:intergenic 25.0%
! TAGGTTTATACGCATTATTT+GGG - chr2.2:11252364-11252383 MS.gene059308:intron 25.0%
! TCAAAAAAATTGAGCAATGT+GGG + chr2.2:11252180-11252199 None:intergenic 25.0%
! TCGATATAATCAAACTCTTA+AGG + chr2.2:11252069-11252088 None:intergenic 25.0%
! TGCTATTACTTCAATTATTG+GGG - chr2.2:11253558-11253577 MS.gene059308:intron 25.0%
! TTAAATGAATAATCATCGAG+TGG - chr2.2:11250502-11250521 MS.gene059308:CDS 25.0%
! TTAGGTTTATACGCATTATT+TGG - chr2.2:11252363-11252382 MS.gene059308:intron 25.0%
! TTATATCGATGCTTGTTTAA+CGG - chr2.2:11252080-11252099 MS.gene059308:intron 25.0%
! TTATATTGTCATTAAACTGG+AGG - chr2.2:11251986-11252005 MS.gene059308:intron 25.0%
! TTTATAAAAATGGTTCACGA+CGG + chr2.2:11252973-11252992 None:intergenic 25.0%
!! ACAGCTTGATAACTTTAATT+CGG + chr2.2:11252998-11253017 None:intergenic 25.0%
!! GAAGAATGAAATGTTTGTTT+TGG - chr2.2:11251114-11251133 MS.gene059308:intron 25.0%
!! GACAATATAAACATGCTTTT+AGG + chr2.2:11251976-11251995 None:intergenic 25.0%
!! GGATTACTACAATTGTATTT+TGG + chr2.2:11252518-11252537 None:intergenic 25.0%
!! TTGAACCAATCAAAATTTTC+AGG - chr2.2:11253424-11253443 MS.gene059308:CDS 25.0%
!!! GCTCAATTTTTTTGATTGTT+TGG - chr2.2:11252185-11252204 MS.gene059308:intron 25.0%
AAGATAATTTGGACATTAGG+GGG - chr2.2:11252128-11252147 MS.gene059308:intron 30.0%
AAGCACTATTGAGACTATTT+GGG + chr2.2:11252721-11252740 None:intergenic 30.0%
AATAACGGTACTAGCAATAA+TGG - chr2.2:11253598-11253617 MS.gene059308:intron 30.0%
AATTACCTGAAAAGAGCTTA+TGG - chr2.2:11251740-11251759 MS.gene059308:intron 30.0%
AATTACCTGAAATGAGCTTA+TGG - chr2.2:11252680-11252699 MS.gene059308:intron 30.0%
ACAATAGCTAACAACACTAA+TGG - chr2.2:11253628-11253647 MS.gene059308:intron 30.0%
ACACTCAAACCAGAATAAAA+TGG - chr2.2:11251927-11251946 MS.gene059308:intron 30.0%
ACATCAAGTAACAATACCAT+TGG - chr2.2:11253658-11253677 MS.gene059308:intron 30.0%
AGCATGCATATAAGATCAAT+TGG + chr2.2:11251418-11251437 None:intergenic 30.0%
ATTACCTGAAAAGAGCTTAT+GGG - chr2.2:11251741-11251760 MS.gene059308:intron 30.0%
CAAAGACTTATGAGACTATT+TGG + chr2.2:11251783-11251802 None:intergenic 30.0%
CTAGTACCGTTATTATTGTT+TGG + chr2.2:11253592-11253611 None:intergenic 30.0%
GCTGCTATTACTTCAATTAT+TGG - chr2.2:11253556-11253575 MS.gene059308:intron 30.0%
TAAGCACTATTGAGACTATT+TGG + chr2.2:11252722-11252741 None:intergenic 30.0%
TTGATGAGGAGAAACAAAAT+GGG - chr2.2:11250728-11250747 MS.gene059308:CDS 30.0%
! CAGCTTGATAACTTTAATTC+GGG + chr2.2:11252997-11253016 None:intergenic 30.0%
! CTTTTGTATCAGATCAATGA+TGG - chr2.2:11251164-11251183 MS.gene059308:intron 30.0%
! TTTGGTTCCAAGACAATTTA+TGG - chr2.2:11250762-11250781 MS.gene059308:CDS 30.0%
!! GAAGTCCTGAAAATTTTGAT+TGG + chr2.2:11253432-11253451 None:intergenic 30.0%
!!! AGTTGGGATTGTTGATTTTA+GGG + chr2.2:11253687-11253706 None:intergenic 30.0%
AAACATGTGCCATGATTGAT+TGG + chr2.2:11251547-11251566 None:intergenic 35.0%
AACAAATGTTGAACAAGCTG+AGG - chr2.2:11251011-11251030 MS.gene059308:CDS 35.0%
ACAATTTATGGAGCTTGGAT+TGG - chr2.2:11250774-11250793 MS.gene059308:CDS 35.0%
ACCAAATCATTGAGCTCAAA+TGG + chr2.2:11252595-11252614 None:intergenic 35.0%
ACCATTTGAGCTCAATGATT+TGG - chr2.2:11252591-11252610 MS.gene059308:intron 35.0%
ACTACAGTAACAACCAAAGT+CGG - chr2.2:11251876-11251895 MS.gene059308:intron 35.0%
ATGAAAAGAAGGAATCCGAT+CGG - chr2.2:11250905-11250924 MS.gene059308:CDS 35.0%
ATTGCTCTTGTGAGGTAATT+TGG + chr2.2:11253232-11253251 None:intergenic 35.0%
ATTGTCATTAAACTGGAGGT+TGG - chr2.2:11251990-11252009 MS.gene059308:intron 35.0%
CTATGCTTGAAGAATAAGGA+AGG + chr2.2:11253255-11253274 None:intergenic 35.0%
CTTGATGAGGAGAAACAAAA+TGG - chr2.2:11250727-11250746 MS.gene059308:CDS 35.0%
CTTTGTACCTGTGCAAATTA+TGG + chr2.2:11253055-11253074 None:intergenic 35.0%
GCACAGCCAAACAATAATAA+CGG - chr2.2:11253583-11253602 MS.gene059308:intron 35.0%
GCTTGTTCAACATTTGTTTG+AGG + chr2.2:11251009-11251028 None:intergenic 35.0%
GGCACTGTTATAATATGTCA+TGG - chr2.2:11251335-11251354 MS.gene059308:intron 35.0%
GTTGCTATGCTTGAAGAATA+AGG + chr2.2:11253259-11253278 None:intergenic 35.0%
TAACAATGAGGAAGATTCCA+AGG - chr2.2:11250861-11250880 MS.gene059308:CDS 35.0%
TATAAAACAGACCCCTAATG+AGG - chr2.2:11251831-11251850 MS.gene059308:intron 35.0%
TCCAATGTAACAGTTGGAAA+TGG + chr2.2:11253298-11253317 None:intergenic 35.0%
TCCATTTCCAACTGTTACAT+TGG - chr2.2:11253294-11253313 MS.gene059308:CDS 35.0%
TGTGTCTGATCATGAAAAGA+AGG - chr2.2:11250894-11250913 MS.gene059308:CDS 35.0%
TTGCTCTTGTGAGGTAATTT+GGG + chr2.2:11253231-11253250 None:intergenic 35.0%
TTTGACTGATCTTGACTTCT+TGG + chr2.2:11250829-11250848 None:intergenic 35.0%
! AATTTTCTGCCTCAGGTATT+TGG - chr2.2:11253391-11253410 MS.gene059308:CDS 35.0%
! ACATGTACCATAATTTGCAC+AGG - chr2.2:11253045-11253064 MS.gene059308:CDS 35.0%
! AGCTTGAGATTGATTTAGCT+AGG - chr2.2:11251499-11251518 MS.gene059308:intron 35.0%
! CATAATTTGCACAGGTACAA+AGG - chr2.2:11253053-11253072 MS.gene059308:CDS 35.0%
! TAACATACCTGTTTTCTCAC+AGG + chr2.2:11251278-11251297 None:intergenic 35.0%
! TAGTAGAAGTACATGAGCTA+TGG + chr2.2:11251467-11251486 None:intergenic 35.0%
! TCAAACTCTTAAGGTGCTTT+CGG + chr2.2:11252060-11252079 None:intergenic 35.0%
!! AATTTTGAGGGAAGGGAAAT+TGG + chr2.2:11253375-11253394 None:intergenic 35.0%
!! AGATCAATGATGGATGTCAA+TGG - chr2.2:11251174-11251193 MS.gene059308:intron 35.0%
!! TTTGAGCTCAATGATTTGGT+TGG - chr2.2:11252595-11252614 MS.gene059308:intron 35.0%
!!! GAGTTGGGATTGTTGATTTT+AGG + chr2.2:11253688-11253707 None:intergenic 35.0%
AAGGGAAATTGGAACTGGTT+AGG + chr2.2:11253364-11253383 None:intergenic 40.0%
AATGTCTGACCAAATACCTG+AGG + chr2.2:11253403-11253422 None:intergenic 40.0%
ACAACACATTGCAGATGCAT+TGG - chr2.2:11250635-11250654 MS.gene059308:CDS 40.0%
ACATGCCATAAGCTCATTTC+AGG + chr2.2:11252688-11252707 None:intergenic 40.0%
ACATGCTTGATGAGGGTAAT+AGG - chr2.2:11250608-11250627 MS.gene059308:CDS 40.0%
ACTTCAACCTACCTCATTAG+GGG + chr2.2:11252784-11252803 None:intergenic 40.0%
AGACAAAAGAGCTAAGCTTG+AGG - chr2.2:11250425-11250444 MS.gene059308:CDS 40.0%
AGACACAAGTTCTTCAACCT+TGG + chr2.2:11250881-11250900 None:intergenic 40.0%
AGCTTATTATCGATGCACCA+TGG - chr2.2:11251241-11251260 MS.gene059308:intron 40.0%
AGGGAAATTGGAACTGGTTA+GGG + chr2.2:11253363-11253382 None:intergenic 40.0%
CAGAGTTGAGAACTCAAAAC+AGG + chr2.2:11251380-11251399 None:intergenic 40.0%
CCAAGACAATTTATGGAGCT+TGG - chr2.2:11250769-11250788 MS.gene059308:CDS 40.0%
CCAAGCTCCATAAATTGTCT+TGG + chr2.2:11250772-11250791 None:intergenic 40.0%
CTACAGTAACAACCAAAGTC+GGG - chr2.2:11251877-11251896 MS.gene059308:intron 40.0%
GAAGAGCAAAAGCAAGTGAT+TGG - chr2.2:11250697-11250716 MS.gene059308:CDS 40.0%
GACTTCAACCTACCTCATTA+GGG + chr2.2:11252785-11252804 None:intergenic 40.0%
GAGAAACAAAATGGGAATGG+TGG - chr2.2:11250736-11250755 MS.gene059308:CDS 40.0%
GAGGAGAAACAAAATGGGAA+TGG - chr2.2:11250733-11250752 MS.gene059308:CDS 40.0%
GATTGGTGGAAAACTTGATG+AGG - chr2.2:11250714-11250733 MS.gene059308:CDS 40.0%
GGATGTCAATGGAGAAAGTA+TGG - chr2.2:11251185-11251204 MS.gene059308:intron 40.0%
GTCTTCAACATTTCGATGCT+AGG - chr2.2:11251569-11251588 MS.gene059308:intron 40.0%
GTTAGGTCCAATGTAACAGT+TGG + chr2.2:11253304-11253323 None:intergenic 40.0%
TGAAAAGAAGGAATCCGATC+GGG - chr2.2:11250906-11250925 MS.gene059308:CDS 40.0%
TGACTTCAACCTACCTCATT+AGG + chr2.2:11252786-11252805 None:intergenic 40.0%
TTGCATTAACTGTGTCAGCA+AGG + chr2.2:11253501-11253520 None:intergenic 40.0%
! AACTGGAGGTTGGAGTTTTA+AGG - chr2.2:11252000-11252019 MS.gene059308:intron 40.0%
! ACCTGAGGCAGAAAATTTTG+AGG + chr2.2:11253388-11253407 None:intergenic 40.0%
! CCTGAGGCAGAAAATTTTGA+GGG + chr2.2:11253387-11253406 None:intergenic 40.0%
! GAGAAAGTATGGACAGAAGA+TGG - chr2.2:11251196-11251215 MS.gene059308:intron 40.0%
! TTTTCTCACAGGACAACCTA+AGG + chr2.2:11251267-11251286 None:intergenic 40.0%
!! AAATGGGAATGGTGGAGTTT+TGG - chr2.2:11250744-11250763 MS.gene059308:CDS 40.0%
!! AGGCAGAAAATTTTGAGGGA+AGG + chr2.2:11253383-11253402 None:intergenic 40.0%
!! GGCAGAAAATTTTGAGGGAA+GGG + chr2.2:11253382-11253401 None:intergenic 40.0%
!! GGTTATTAGGGAACTGGTTT+TGG + chr2.2:11253339-11253358 None:intergenic 40.0%
!! TTTGGTTTGGTGACTGAGTT+AGG + chr2.2:11253321-11253340 None:intergenic 40.0%
!!! GTTGATTTTAGGGCTTCCAA+TGG + chr2.2:11253677-11253696 None:intergenic 40.0%
!!! TTAGGGAACTGGTTTTGGTT+TGG + chr2.2:11253334-11253353 None:intergenic 40.0%
AAACAGACCCCTAATGAGGT+AGG - chr2.2:11251835-11251854 MS.gene059308:intron 45.0%
AACCCTTGCTTTCCTCATAG+TGG + chr2.2:11251037-11251056 None:intergenic 45.0%
AACTGGTTAGGGGGGTTATT+AGG + chr2.2:11253352-11253371 None:intergenic 45.0%
AAGGAAGGATTGCTCTTGTG+AGG + chr2.2:11253240-11253259 None:intergenic 45.0%
ACCTGAAAAGAGCTTATGGG+TGG - chr2.2:11251744-11251763 MS.gene059308:intron 45.0%
ACTGAAGTAACGACCGAAGT+CGG - chr2.2:11252815-11252834 MS.gene059308:intron 45.0%
ACTGAGGAACATGCTTGATG+AGG - chr2.2:11250600-11250619 MS.gene059308:CDS 45.0%
ACTGGTTAGGGGGGTTATTA+GGG + chr2.2:11253351-11253370 None:intergenic 45.0%
AGGTGGAGAATCATCAACTG+AGG - chr2.2:11250584-11250603 MS.gene059308:CDS 45.0%
AGGTTGTCCTGTGAGAAAAC+AGG - chr2.2:11251268-11251287 MS.gene059308:intron 45.0%
AGTCCATCAGCACTTGTCAT+TGG + chr2.2:11253202-11253221 None:intergenic 45.0%
CAAGAATTGTGACCCGACTT+CGG + chr2.2:11252831-11252850 None:intergenic 45.0%
CACCTTCATTCTCTCAAGCT+CGG + chr2.2:11250569-11250588 None:intergenic 45.0%
CCTGAAAAGAGCTTATGGGT+GGG - chr2.2:11251745-11251764 MS.gene059308:intron 45.0%
CGATAATAAGCTCGAGGACA+CGG + chr2.2:11251233-11251252 None:intergenic 45.0%
CTGAGGAACATGCTTGATGA+GGG - chr2.2:11250601-11250620 MS.gene059308:CDS 45.0%
GAAAAGAAGGAATCCGATCG+GGG - chr2.2:11250907-11250926 MS.gene059308:CDS 45.0%
GAAATTGGAACTGGTTAGGG+GGG + chr2.2:11253360-11253379 None:intergenic 45.0%
GAGCAAAAGCAAGTGATTGG+TGG - chr2.2:11250700-11250719 MS.gene059308:CDS 45.0%
GAGTATGGTGCAAGACAAGA+AGG - chr2.2:11250660-11250679 MS.gene059308:CDS 45.0%
GATAATAAGCTCGAGGACAC+GGG + chr2.2:11251232-11251251 None:intergenic 45.0%
GCAGATGCATTGGATGAGTA+TGG - chr2.2:11250645-11250664 MS.gene059308:CDS 45.0%
GCTAAAACAGACCCCTAATG+AGG - chr2.2:11252770-11252789 MS.gene059308:intron 45.0%
GCTAAAGCTGCAGTGAAGTT+AGG + chr2.2:11253535-11253554 None:intergenic 45.0%
GCTATAATAGTCGGTGACAC+AGG - chr2.2:11251314-11251333 MS.gene059308:intron 45.0%
GCTTCAACCTACCTCATTAG+GGG + chr2.2:11251845-11251864 None:intergenic 45.0%
GGAAATTGGAACTGGTTAGG+GGG + chr2.2:11253361-11253380 None:intergenic 45.0%
GGCTTCAACCTACCTCATTA+GGG + chr2.2:11251846-11251865 None:intergenic 45.0%
GGGAAATTGGAACTGGTTAG+GGG + chr2.2:11253362-11253381 None:intergenic 45.0%
TATGGACAGAAGATGGCGAA+AGG - chr2.2:11251203-11251222 MS.gene059308:intron 45.0%
TGGCTTCAACCTACCTCATT+AGG + chr2.2:11251847-11251866 None:intergenic 45.0%
TGTACCATTTCCATAGCTGC+TGG + chr2.2:11253142-11253161 None:intergenic 45.0%
TTGTGATGCTACTGCGACTA+AGG + chr2.2:11252902-11252921 None:intergenic 45.0%
TTTCGATGCTAGGCCATGTT+TGG - chr2.2:11251579-11251598 MS.gene059308:intron 45.0%
! CCCTCAAAATTTTCTGCCTC+AGG - chr2.2:11253384-11253403 MS.gene059308:CDS 45.0%
! GAAGTGTACCATGTTAGCCT+CGG + chr2.2:11251076-11251095 None:intergenic 45.0%
! GCTTCTTTCTTTTCCCCGAT+CGG + chr2.2:11250923-11250942 None:intergenic 45.0%
! GTGCATCGATAATAAGCTCG+AGG + chr2.2:11251239-11251258 None:intergenic 45.0%
AACAAGCTGAGGCCACTATG+AGG - chr2.2:11251022-11251041 MS.gene059308:CDS 50.0%
ACCATTTCCATAGCTGCTGG+AGG + chr2.2:11253139-11253158 None:intergenic 50.0%
ACTGCGACTAAGGTCGCATT+TGG + chr2.2:11252892-11252911 None:intergenic 50.0%
ACTGTGTCAGCAAGGTTCTG+TGG + chr2.2:11253493-11253512 None:intergenic 50.0%
AGCCGAGCTTGAGAGAATGA+AGG - chr2.2:11250564-11250583 MS.gene059308:CDS 50.0%
AGGCCACTATGAGGAAAGCA+AGG - chr2.2:11251031-11251050 MS.gene059308:intron 50.0%
CGAGCTTGAGAGAATGAAGG+TGG - chr2.2:11250567-11250586 MS.gene059308:CDS 50.0%
CTGAAGTAACGACCGAAGTC+GGG - chr2.2:11252816-11252835 MS.gene059308:intron 50.0%
GAGGGAAGGGAAATTGGAAC+TGG + chr2.2:11253369-11253388 None:intergenic 50.0%
GCAGCTAAAACTCGATCTGC+AGG + chr2.2:11250952-11250971 None:intergenic 50.0%
GCTGCAAGAATGTTGCTGTC+AGG - chr2.2:11253175-11253194 MS.gene059308:CDS 50.0%
GGCCACTATGAGGAAAGCAA+GGG - chr2.2:11251032-11251051 MS.gene059308:intron 50.0%
GGTGCAAGACAAGAAGGTAG+AGG - chr2.2:11250666-11250685 MS.gene059308:CDS 50.0%
TAGGGGGGTTATTAGGGAAC+TGG + chr2.2:11253345-11253364 None:intergenic 50.0%
TATCGATGCACCATGGCCTT+AGG - chr2.2:11251248-11251267 MS.gene059308:intron 50.0%
TTCAGTTAGAGCTCGATCCG+AGG - chr2.2:11251056-11251075 MS.gene059308:intron 50.0%
! CAAGAAGTACGACCCGACTT+TGG + chr2.2:11251892-11251911 None:intergenic 50.0%
! CCCACCCATAAGCTCTTTTC+AGG + chr2.2:11251748-11251767 None:intergenic 50.0%
!! ACATTAGGGGGTGCTTGTAG+CGG - chr2.2:11252140-11252159 MS.gene059308:intron 50.0%
!! GGACCAATGACAAGTGCTGA+TGG - chr2.2:11253196-11253215 MS.gene059308:CDS 50.0%
AGCTCGATCCGAGGCTAACA+TGG - chr2.2:11251065-11251084 MS.gene059308:intron 55.0%
AGGATGCGAGGGCGATATCA+TGG + chr2.2:11252944-11252963 None:intergenic 55.0%
ATGGTTCACGACGGAGACCT+AGG + chr2.2:11252964-11252983 None:intergenic 55.0%
CACAGGACAACCTAAGGCCA+TGG + chr2.2:11251261-11251280 None:intergenic 55.0%
GCCTCCAGCAGCTATGGAAA+TGG - chr2.2:11253135-11253154 MS.gene059308:CDS 55.0%
TGATATCGCCCTCGCATCCT+AGG - chr2.2:11252944-11252963 MS.gene059308:intron 55.0%
TGCTTTGCCTCCAGCAGCTA+TGG - chr2.2:11253129-11253148 MS.gene059308:CDS 55.0%
GACGGAGACCTAGGATGCGA+GGG + chr2.2:11252955-11252974 None:intergenic 60.0%
!! AGGGGGTGCTTGTAGCGGAT+AGG - chr2.2:11252145-11252164 MS.gene059308:intron 60.0%
CGACGGAGACCTAGGATGCG+AGG + chr2.2:11252956-11252975 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 11250393 11253720 11250393 ID=MS.gene059308
chr2.2 mRNA 11250393 11253720 11250393 ID=MS.gene059308.t1;Parent=MS.gene059308
chr2.2 exon 11253667 11253720 11253667 ID=MS.gene059308.t1.exon1;Parent=MS.gene059308.t1
chr2.2 CDS 11253667 11253720 11253667 ID=cds.MS.gene059308.t1;Parent=MS.gene059308.t1
chr2.2 exon 11253027 11253563 11253027 ID=MS.gene059308.t1.exon2;Parent=MS.gene059308.t1
chr2.2 CDS 11253027 11253563 11253027 ID=cds.MS.gene059308.t1;Parent=MS.gene059308.t1
chr2.2 exon 11252824 11252937 11252824 ID=MS.gene059308.t1.exon3;Parent=MS.gene059308.t1
chr2.2 CDS 11252824 11252937 11252824 ID=cds.MS.gene059308.t1;Parent=MS.gene059308.t1
chr2.2 exon 11250393 11251046 11250393 ID=MS.gene059308.t1.exon4;Parent=MS.gene059308.t1
chr2.2 CDS 11250393 11251046 11250393 ID=cds.MS.gene059308.t1;Parent=MS.gene059308.t1
Gene Sequence

>MS.gene059308

ATGATGGAGGAAGACATAGCAAGTAATTCAGAAGACAAAAGAGCTAAGCTTGAGGTAGAGAAAATTTATTATATGTAACAACAAATTCAATAATTTGATGAAGTTGTAGTTAAATGAATAATCATCGAGTGGTTTCTATAATTAAATTATTTTTCAGCTCGTTGTTCTTCAAGCCGAGCTTGAGAGAATGAAGGTGGAGAATCATCAACTGAGGAACATGCTTGATGAGGGTAATAGGAAGTACAACACATTGCAGATGCATTGGATGAGTATGGTGCAAGACAAGAAGGTAGAGGATTGTAATGAAGAGCAAAAGCAAGTGATTGGTGGAAAACTTGATGAGGAGAAACAAAATGGGAATGGTGGAGTTTTGGTTCCAAGACAATTTATGGAGCTTGGATTGGCTGCAAATAATTCTGATGCTATTGATGAACCAAGAAGTCAAGATCAGTCAAAATTACTTGCAAATAACAATGAGGAAGATTCCAAGGTTGAAGAACTTGTGTCTGATCATGAAAAGAAGGAATCCGATCGGGGAAAAGAAAGAAGCAGCAGTCCTGCAGATCGAGTTTTAGCTGCTAATAATACTAATAATAATGTTGCAAACTTTAGTCCTCAAACAAATGTTGAACAAGCTGAGGCCACTATGAGGAAAGCAAGGGTTTCAGTTAGAGCTCGATCCGAGGCTAACATGGTACACTTCAATTTCACATTTTAGTTAGAAGAATGAAATGTTTGTTTTGGCTTTTATATGATGCTAAAGTTTTTATTCTTTTGTATCAGATCAATGATGGATGTCAATGGAGAAAGTATGGACAGAAGATGGCGAAAGGAAACCCGTGTCCTCGAGCTTATTATCGATGCACCATGGCCTTAGGTTGTCCTGTGAGAAAACAGGTATGTTATTCGATATAAATGTTAGCTATAATAGTCGGTGACACAGGCACTGTTATAATATGTCATGGTCATTCACAAACATAATTTCCTGTTTTGAGTTCTCAACTCTGTCAAGTTTTATTCTACCAATTGATCTTATATGCATGCTCAATTAAATTAGTTTCAAATTATGTTCCATAGCTCATGTACTTCTACTAAAAAATGTGATGAGCTTGAGATTGATTTAGCTAGGATATATAAGTATACAATAATATCCAATCAATCATGGCACATGTTTCAGTCTTCAACATTTCGATGCTAGGCCATGTTTGGATAAACAGTTTTATTGAGCACTTATCATATAAGTGCTTATGTATAGACTATTTCTATAACAGAAGATAAAATAAAGTCAAACTGTGTTCATATAAATTATAAGTTGTTTTCATTAGCTATCCTGAAAAAGTTTATAGAAATTACCTGAAAAGAGCTTATGGGTGGGTCATAAGCTATCCCAAATAGTCTCATAAGTCTTTGTACTAGTAGATAAGTCCAAATAAGTCAATATAAAACAGACCCCTAATGAGGTAGGTTGAAGCCAAAATATTAAACTACAGTAACAACCAAAGTCGGGTCGTACTTCTTGATACTAAGCAGAATCACACTCAAACCAGAATAAAATGGAAGATATAAGATAAGTTTTTGTGCCTAAAAGCATGTTTATATTGTCATTAAACTGGAGGTTGGAGTTTTAAGGTATCATATATTCTCTGCATTTTAAAATTCAAATTCCGAAAGCACCTTAAGAGTTTGATTATATCGATGCTTGTTTAACGGTTTCTTCAAAATAAAATAAAGACAAAAGATAATTTGGACATTAGGGGGTGCTTGTAGCGGATAGGTCTTTATGTCCCACATTGCTCAATTTTTTTGATTGTTTGGTGTATAAATATGTTTGAAAACTCTCATTATTTGAGATGTCTAGATGAAGATGTTTACATTCAAAATTGAACATCTTCAGCTTGCCGTCATTTTTATTTTTAAGATGGGATCCAATTTCATTTTATTTTTGAAAGATTTAACTTTTTATTTAGAGCTTAGGTTTATACGCATTATTTGGGCACAAAAATACATAGCATTATTCAGCTATTTTAAAAATACATATTATGTGATTCTTTTCCTTTTCTACCTTTTTTAAACGTGTTTGTATAAATGGTGTGACTAAATAATTGTGAGCTTGTAAGACTTACCAAAATACAATTGTAGTAATCCCCATAATAAGTGAATTTCAACTTTCTTTATAAACATTTTGGTGGATCTCATTAACCATTTGAGCTCAATGATTTGGTTGGTCAAAGTGTTTTGATATAAGTTATAAGTTGTTTTCATTAGTTATCCTAAAAAAGTTTATCGAAATTACCTGAAATGAGCTTATGGCATGTCATAAACTCTCCCAAATAGTCTCAATAGTGCTTATACAAGTAGATAAGTCTAAATCAGTCAAGCTAAAACAGACCCCTAATGAGGTAGGTTGAAGTCAAAATATTAAACTGAAGTAACGACCGAAGTCGGGTCACAATTCTTGATACTACACAAAATCACACTCAAATGTAACTGATGCGACCAAATGCGACCTTAGTCGCAGTAGCATCACAAACATAAAGACGTAAAAAAACCATGATATCGCCCTCGCATCCTAGGTCTCCGTCGTGAACCATTTTTATAAAACCCGAATTAAAGTTATCAAGCTGTTTATGTCTAACTAGAGATCAATCTAAGACATGTACCATAATTTGCACAGGTACAAAGGTGTGCTGAAGACAAAACAATACTTATCACAACATATGAAGGACATCACATTCATGCTTTGCCTCCAGCAGCTATGGAAATGGTACAAACAACATCATCAGCTGCAAGAATGTTGCTGTCAGGACCAATGACAAGTGCTGATGGACTAATGAACCCAAATTACCTCACAAGAGCAATCCTTCCTTATTCTTCAAGCATAGCAACTATCTCAGCATCAGCTCCATTTCCAACTGTTACATTGGACCTAACTCAGTCACCAAACCAAAACCAGTTCCCTAATAACCCCCCTAACCAGTTCCAATTTCCCTTCCCTCAAAATTTTCTGCCTCAGGTATTTGGTCAGACATTGTTGAACCAATCAAAATTTTCAGGACTTCAAATGTCTCAAGATGCAGCAAACAGTTCTCAGCAGACACCACAGAACCTTGCTGACACAGTTAATGCAATTGCAGCTGATCCTAACTTCACTGCAGCTTTAGCAGCTGCTATTACTTCAATTATTGGGGCTGCACAGCCAAACAATAATAACGGTACTAGCAATAATGGTAACAGTACAATAGCTAACAACACTAATGGCAATGTTACATCAAGTAACAATACCATTGGAAGCCCTAAAATCAACAATCCCAACTCCTCAGTAGAGTAG
Protein sequence

>MS.gene059308.t1

MMEEDIASNSEDKRAKLELVVLQAELERMKVENHQLRNMLDEGNRKYNTLQMHWMSMVQDKKVEDCNEEQKQVIGGKLDEEKQNGNGGVLVPRQFMELGLAANNSDAIDEPRSQDQSKLLANNNEEDSKVEELVSDHEKKESDRGKERSSSPADRVLAANNTNNNVANFSPQTNVEQAEATMRKARVSVRARSEANMINDGCQWRKYGQKMAKGNPCPRAYYRCTMALGCPVRKQVQRCAEDKTILITTYEGHHIHALPPAAMEMVQTTSSAARMLLSGPMTSADGLMNPNYLTRAILPYSSSIATISASAPFPTVTLDLTQSPNQNQFPNNPPNQFQFPFPQNFLPQVFGQTLLNQSKFSGLQMSQDAANSSQQTPQNLADTVNAIAADPNFTAALAAAITSIIGAAQPNNNNGTSNNGNSTIANNTNGNVTSSNNTIGSPKINNPNSSVE