Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05963.t1 | XP_003630686.1 | 99.4 | 313 | 2 | 0 | 1 | 313 | 198 | 510 | 2.20E-167 | 598.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05963.t1 | P29677 | 74.4 | 313 | 80 | 0 | 1 | 313 | 192 | 504 | 4.1e-130 | 465.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05963.t1 | G7L7C9 | 99.4 | 313 | 2 | 0 | 1 | 313 | 198 | 510 | 1.6e-167 | 598.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05963 | MS.gene06153 | 0.906011 | 2.34E-80 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05963.t1 | MTR_8g102230 | 99.361 | 313 | 2 | 0 | 1 | 313 | 198 | 510 | 0.0 | 634 |
| MS.gene05963.t1 | MTR_8g014660 | 72.524 | 313 | 86 | 0 | 1 | 313 | 195 | 507 | 2.58e-156 | 447 |
| MS.gene05963.t1 | MTR_7g053330 | 30.097 | 309 | 194 | 13 | 7 | 303 | 222 | 520 | 2.04e-33 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05963.t1 | AT3G16480 | 65.595 | 311 | 105 | 2 | 1 | 311 | 191 | 499 | 8.41e-134 | 389 |
| MS.gene05963.t1 | AT1G51980 | 65.595 | 311 | 105 | 2 | 1 | 311 | 195 | 503 | 2.70e-132 | 385 |
| MS.gene05963.t1 | AT1G51980 | 65.116 | 258 | 88 | 2 | 1 | 258 | 195 | 450 | 1.37e-102 | 308 |
| MS.gene05963.t1 | AT3G02090 | 29.560 | 318 | 200 | 14 | 7 | 313 | 221 | 525 | 9.82e-30 | 118 |
| MS.gene05963.t1 | AT3G02090 | 30.450 | 289 | 182 | 12 | 7 | 285 | 221 | 500 | 3.71e-28 | 114 |
Find 66 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCTGTGTATACTGATTT+TGG | 0.186959 | 4.2:+2905099 | None:intergenic |
| ATTCTCACAGTTGCCACTTC+TGG | 0.252866 | 4.2:-2901612 | MS.gene05963:CDS |
| GCTCTGGCATTTGAACTTCC+TGG | 0.297177 | 4.2:-2904931 | MS.gene05963:CDS |
| TCAGCAGTAAATAGACTAAA+TGG | 0.315220 | 4.2:-2905390 | MS.gene05963:CDS |
| CGAATAGTACTTGCAGCTTC+TGG | 0.330623 | 4.2:-2905198 | MS.gene05963:CDS |
| GGATTCCAAATTCATCAAAA+TGG | 0.331765 | 4.2:+2901439 | None:intergenic |
| TTACATAATTCAGATGCTAT+TGG | 0.340743 | 4.2:-2904720 | MS.gene05963:intron |
| GTTCAAATGCCAGAGCAAAA+TGG | 0.340749 | 4.2:+2904938 | None:intergenic |
| TACATAATTCAGATGCTATT+GGG | 0.340761 | 4.2:-2904719 | MS.gene05963:intron |
| TATCGTTGTCAAAGTGAAAC+AGG | 0.356292 | 4.2:-2905072 | MS.gene05963:CDS |
| GGCAGATTTCGTAGCTTGTT+TGG | 0.386723 | 4.2:+2901460 | None:intergenic |
| CAGCTGGTGGGCCTGGTAAA+GGG | 0.394120 | 4.2:-2904679 | MS.gene05963:CDS |
| TCAGCTGGTGGGCCTGGTAA+AGG | 0.414881 | 4.2:-2904680 | MS.gene05963:CDS |
| AAACCCTCAAGACTTGCTAT+TGG | 0.423179 | 4.2:-2905472 | MS.gene05963:CDS |
| TTCAAATGCCAGAGCAAAAT+GGG | 0.424354 | 4.2:+2904939 | None:intergenic |
| CTGCTCACTGATTCGTAGCT+TGG | 0.426370 | 4.2:+2900841 | None:intergenic |
| TTGGAGGCAATTCATTCTGC+TGG | 0.430435 | 4.2:-2905453 | MS.gene05963:CDS |
| TCATTCTCAGCTGGTGGGCC+TGG | 0.430849 | 4.2:-2904686 | MS.gene05963:CDS |
| AACAATATTTACAATAATAC+CGG | 0.433486 | 4.2:-2904307 | MS.gene05963:CDS |
| CATTTGAACTTCCTGGCGGC+TGG | 0.435621 | 4.2:-2904924 | MS.gene05963:CDS |
| GCTTTCGTTTGCAGTTGATC+AGG | 0.443499 | 4.2:-2901498 | MS.gene05963:intron |
| ACGTGGAACACTGGGTAAAT+CGG | 0.446147 | 4.2:+2905131 | None:intergenic |
| TGGCGGCTGGCATAACTTGA+AGG | 0.449075 | 4.2:-2904911 | MS.gene05963:CDS |
| TCCACAAGTTCATTCGATAT+CGG | 0.450885 | 4.2:-2904335 | MS.gene05963:CDS |
| ATGGTTGTTTCAGAAGATAT+AGG | 0.461616 | 4.2:-2901217 | MS.gene05963:CDS |
| CCTCCAATAGCAAGTCTTGA+GGG | 0.463091 | 4.2:+2905469 | None:intergenic |
| CCTCTCACAATGGCATCATA+TGG | 0.464688 | 4.2:-2900961 | MS.gene05963:CDS |
| CTGAAAGTGAAGGCTGAGAT+TGG | 0.468579 | 4.2:-2905507 | MS.gene05963:CDS |
| CTCATTAGCTGCAATATCAA+TGG | 0.483463 | 4.2:+2901635 | None:intergenic |
| CTCTTCAGGACGTGGAACAC+TGG | 0.491349 | 4.2:+2905122 | None:intergenic |
| CGCGAATACATCCCTTTACC+AGG | 0.496570 | 4.2:+2904668 | None:intergenic |
| CCCTCAAGACTTGCTATTGG+AGG | 0.497371 | 4.2:-2905469 | MS.gene05963:CDS |
| GGTGGATCATTCTCAGCTGG+TGG | 0.512878 | 4.2:-2904692 | MS.gene05963:CDS |
| GGCGGTGGATCATTCTCAGC+TGG | 0.517181 | 4.2:-2904695 | MS.gene05963:CDS |
| GCATAACTTGAAGGATGCTA+TGG | 0.518450 | 4.2:-2904902 | MS.gene05963:CDS |
| GAAGCTGCAAGTACTATTCG+AGG | 0.520541 | 4.2:+2905201 | None:intergenic |
| GCTGATTCTGAAGCTAAAAG+AGG | 0.522365 | 4.2:+2905408 | None:intergenic |
| TTCAAGTTATGCCAGCCGCC+AGG | 0.525656 | 4.2:+2904913 | None:intergenic |
| TAAATCGGACAAAAGAGGTT+CGG | 0.527264 | 4.2:+2905146 | None:intergenic |
| GCCGATATCGAATGAACTTG+TGG | 0.536829 | 4.2:+2904334 | None:intergenic |
| AGGGACTTACTGTTGTGACT+TGG | 0.538586 | 4.2:+2904272 | None:intergenic |
| CTGGTAAAGGGATGTATTCG+CGG | 0.542817 | 4.2:-2904667 | MS.gene05963:CDS |
| CAATGTACCTTGTCCAGAAG+TGG | 0.546813 | 4.2:+2901599 | None:intergenic |
| GTGGATCATTCTCAGCTGGT+GGG | 0.548891 | 4.2:-2904691 | MS.gene05963:CDS |
| AGTGGACGAAGTAACTTTGA+AGG | 0.562537 | 4.2:-2901019 | MS.gene05963:CDS |
| TCTTCAGGACGTGGAACACT+GGG | 0.569641 | 4.2:+2905123 | None:intergenic |
| TATGTAGCTTCTGAAAGTGA+AGG | 0.570547 | 4.2:-2905517 | None:intergenic |
| GCCTCCAATAGCAAGTCTTG+AGG | 0.576645 | 4.2:+2905468 | None:intergenic |
| CATTTCGTCACCTCTCACAA+TGG | 0.577598 | 4.2:-2900971 | MS.gene05963:CDS |
| CTGGGTAAATCGGACAAAAG+AGG | 0.582618 | 4.2:+2905141 | None:intergenic |
| CAGATGCTATTGGGAGGCGG+TGG | 0.582698 | 4.2:-2904710 | MS.gene05963:CDS |
| AGCTTCTGGTGTTGAGCATG+AGG | 0.584438 | 4.2:-2905184 | MS.gene05963:CDS |
| GGACAAAAGAGGTTCGGCAA+TGG | 0.592591 | 4.2:+2905152 | None:intergenic |
| ACAATGGCATCATATGGAGA+TGG | 0.608918 | 4.2:-2900955 | MS.gene05963:intron |
| ACAGTTGCCACTTCTGGACA+AGG | 0.624060 | 4.2:-2901606 | MS.gene05963:intron |
| GATAATCAAGACCTGAAGAA+CGG | 0.625024 | 4.2:+2904873 | None:intergenic |
| ATTCAGATGCTATTGGGAGG+CGG | 0.630948 | 4.2:-2904713 | MS.gene05963:intron |
| ATCGTTGTCAAAGTGAAACA+GGG | 0.638854 | 4.2:-2905071 | MS.gene05963:CDS |
| CCATATGATGCCATTGTGAG+AGG | 0.648207 | 4.2:+2900961 | None:intergenic |
| AGCTAAAAGAGGATTAGCCA+AGG | 0.651532 | 4.2:+2905419 | None:intergenic |
| GAGCCAAAATCAGTATACAC+AGG | 0.672733 | 4.2:-2905102 | MS.gene05963:CDS |
| GTCCTTACTCAGGAAACCTG+TGG | 0.672973 | 4.2:-2901058 | MS.gene05963:intron |
| ATAATTCAGATGCTATTGGG+AGG | 0.684827 | 4.2:-2904716 | MS.gene05963:intron |
| CCAAAATCAGTATACACAGG+TGG | 0.699521 | 4.2:-2905099 | MS.gene05963:CDS |
| TCGTTGTCAAAGTGAAACAG+GGG | 0.731053 | 4.2:-2905070 | MS.gene05963:intron |
| CTGGCATTTGAACTTCCTGG+CGG | 0.735748 | 4.2:-2904928 | MS.gene05963:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTTTTTTTTAAAAA+TGG | + | chr4.2:2901770-2901789 | None:intergenic | 0.0% |
| !! | AATGATAATTAAGAAATAAA+AGG | - | chr4.2:2902860-2902879 | MS.gene05963:intron | 10.0% |
| !! | ATGATAATTAAGAAATAAAA+GGG | - | chr4.2:2902861-2902880 | MS.gene05963:intron | 10.0% |
| !! | TTATTCTCATTTATATATTA+GGG | - | chr4.2:2904654-2904673 | MS.gene05963:intron | 10.0% |
| !! | TTGATAAAAAAAAAAAAAGT+GGG | - | chr4.2:2904172-2904191 | MS.gene05963:intron | 10.0% |
| !!! | ATACATATTTTATATTTCTT+AGG | + | chr4.2:2901906-2901925 | None:intergenic | 10.0% |
| !!! | TACATATTTTATATTTCTTA+GGG | + | chr4.2:2901905-2901924 | None:intergenic | 10.0% |
| !! | AAATGATAATTAAGAAATAC+AGG | - | chr4.2:2902984-2903003 | MS.gene05963:intron | 15.0% |
| !! | AACAATATTTACAATAATAC+CGG | - | chr4.2:2902025-2902044 | MS.gene05963:intron | 15.0% |
| !! | AATTTAATCAATCAAATTTG+TGG | - | chr4.2:2903467-2903486 | MS.gene05963:intron | 15.0% |
| !! | CTAATATATAAATGAGAATA+AGG | + | chr4.2:2904655-2904674 | None:intergenic | 15.0% |
| !! | CTTATTCTCATTTATATATT+AGG | - | chr4.2:2904653-2904672 | MS.gene05963:intron | 15.0% |
| !! | CTTGATAAAAAAAAAAAAAG+TGG | - | chr4.2:2904171-2904190 | MS.gene05963:intron | 15.0% |
| !! | GAAATATTTATAATGAAGTA+TGG | - | chr4.2:2902611-2902630 | MS.gene05963:intron | 15.0% |
| !! | GATAAAACTTGAAAAAAATT+AGG | - | chr4.2:2903384-2903403 | MS.gene05963:intron | 15.0% |
| !! | TAACATGACAAAAAATATAA+TGG | - | chr4.2:2903137-2903156 | MS.gene05963:intron | 15.0% |
| !! | TGTAACAATTAAAAATTTGA+GGG | - | chr4.2:2903864-2903883 | MS.gene05963:intron | 15.0% |
| !! | TTGTAACAATTAAAAATTTG+AGG | - | chr4.2:2903863-2903882 | MS.gene05963:intron | 15.0% |
| !!! | AAACATCAATTTTTATTGAA+AGG | + | chr4.2:2903082-2903101 | None:intergenic | 15.0% |
| !!! | ACATATTTTATATTTCTTAG+GGG | + | chr4.2:2901904-2901923 | None:intergenic | 15.0% |
| !!! | ATCTAATTTTGTAAAATATC+AGG | - | chr4.2:2901094-2901113 | MS.gene05963:intron | 15.0% |
| !!! | ATGTTTGTTTTTTTATTTCA+TGG | - | chr4.2:2904511-2904530 | MS.gene05963:intron | 15.0% |
| !!! | ATGTTTTTATACTTCTAAAT+CGG | - | chr4.2:2903096-2903115 | MS.gene05963:intron | 15.0% |
| !!! | CATAGTTTCTATTATATTTT+TGG | + | chr4.2:2903913-2903932 | None:intergenic | 15.0% |
| !!! | TATTTTTCATTTAAACATCT+GGG | - | chr4.2:2903291-2903310 | MS.gene05963:intron | 15.0% |
| !!! | TTAAAGAAATTTTAATTGGT+GGG | - | chr4.2:2903422-2903441 | MS.gene05963:intron | 15.0% |
| !!! | TTATTTTTCATTTAAACATC+TGG | - | chr4.2:2903290-2903309 | MS.gene05963:intron | 15.0% |
| !!! | TTTAAAGAAATTTTAATTGG+TGG | - | chr4.2:2903421-2903440 | MS.gene05963:intron | 15.0% |
| !! | AAATAAAATAATTCCAACCA+AGG | + | chr4.2:2902812-2902831 | None:intergenic | 20.0% |
| !! | AAATAATATGGAGTCATATA+CGG | + | chr4.2:2901831-2901850 | None:intergenic | 20.0% |
| !! | AAGAAAAACAAGAAAAATCA+AGG | + | chr4.2:2903258-2903277 | None:intergenic | 20.0% |
| !! | AATCTATTGTCTAATATGTT+CGG | + | chr4.2:2904378-2904397 | None:intergenic | 20.0% |
| !! | CATGTATCACTAATATTTAA+AGG | - | chr4.2:2902835-2902854 | MS.gene05963:intron | 20.0% |
| !! | GTTACAATTATATAGTGTAT+AGG | - | chr4.2:2902442-2902461 | MS.gene05963:intron | 20.0% |
| !! | TAAAAAAAAAAAAAGTGGGA+AGG | - | chr4.2:2904176-2904195 | MS.gene05963:intron | 20.0% |
| !! | TAATAAAAACAAGGATGTTA+AGG | + | chr4.2:2901948-2901967 | None:intergenic | 20.0% |
| !! | TAATCTAAATAAATGAACCA+CGG | + | chr4.2:2902372-2902391 | None:intergenic | 20.0% |
| !! | TTTGCCTAAAAAAGTAAATA+GGG | - | chr4.2:2902551-2902570 | MS.gene05963:intron | 20.0% |
| !!! | AAATAGTGTTAATTTTCACA+TGG | + | chr4.2:2904278-2904297 | None:intergenic | 20.0% |
| !!! | ACACACTATATTTTTTCAAT+TGG | + | chr4.2:2903996-2904015 | None:intergenic | 20.0% |
| !!! | AGATATTGGAATTTTTATGT+TGG | - | chr4.2:2902103-2902122 | MS.gene05963:intron | 20.0% |
| !!! | ATATCTCTATTTTTTCAGTT+AGG | - | chr4.2:2901325-2901344 | MS.gene05963:intron | 20.0% |
| !!! | ATTTTGATTATGTGTGATTT+TGG | - | chr4.2:2903188-2903207 | MS.gene05963:intron | 20.0% |
| !!! | CATATTTTATATTTCTTAGG+GGG | + | chr4.2:2901903-2901922 | None:intergenic | 20.0% |
| !!! | GGGTTTAAAGAAATTTTAAT+TGG | - | chr4.2:2903418-2903437 | MS.gene05963:intron | 20.0% |
| !!! | TATCTCTATTTTTTCAGTTA+GGG | - | chr4.2:2901326-2901345 | MS.gene05963:intron | 20.0% |
| !!! | TTCAACTAATATTCTTTTAG+TGG | - | chr4.2:2904397-2904416 | MS.gene05963:intron | 20.0% |
| !!! | TTTTGCCTAAAAAAGTAAAT+AGG | - | chr4.2:2902550-2902569 | MS.gene05963:intron | 20.0% |
| ! | AAAAATTAGGATGTGAGATT+AGG | - | chr4.2:2903397-2903416 | MS.gene05963:intron | 25.0% |
| ! | AAAATTAGGATGTGAGATTA+GGG | - | chr4.2:2903398-2903417 | MS.gene05963:intron | 25.0% |
| ! | AAATTCCAATATCTCCAATA+TGG | + | chr4.2:2902097-2902116 | None:intergenic | 25.0% |
| ! | AAGTAAACATTCATTTGAGA+TGG | + | chr4.2:2904932-2904951 | None:intergenic | 25.0% |
| ! | AATAATATGGAGTCATATAC+GGG | + | chr4.2:2901830-2901849 | None:intergenic | 25.0% |
| ! | AATTCCAATATCTCCAATAT+GGG | + | chr4.2:2902096-2902115 | None:intergenic | 25.0% |
| ! | ACAGGCAAATAAATCAAAAT+TGG | - | chr4.2:2903002-2903021 | MS.gene05963:intron | 25.0% |
| ! | ATAATGAAGTATGGAAGAAA+TGG | - | chr4.2:2902620-2902639 | MS.gene05963:intron | 25.0% |
| ! | ATCTCAAATGAATGTTTACT+TGG | - | chr4.2:2904931-2904950 | MS.gene05963:CDS | 25.0% |
| ! | ATCTGCAAGTAATAAAAACA+AGG | + | chr4.2:2901957-2901976 | None:intergenic | 25.0% |
| ! | CACACATAATCAAAATCAAA+GGG | + | chr4.2:2903184-2903203 | None:intergenic | 25.0% |
| ! | CTTGATTATCACGTTTAAAT+TGG | - | chr4.2:2904783-2904802 | MS.gene05963:intron | 25.0% |
| ! | GAATTTGAGAGATGAATAAA+TGG | - | chr4.2:2903508-2903527 | MS.gene05963:intron | 25.0% |
| ! | GTTACATTACCTATAAACAT+TGG | + | chr4.2:2902129-2902148 | None:intergenic | 25.0% |
| ! | GTTTATAGGTAATGTAACTA+AGG | - | chr4.2:2902131-2902150 | MS.gene05963:intron | 25.0% |
| ! | TACATAATTCAGATGCTATT+GGG | - | chr4.2:2901613-2901632 | MS.gene05963:CDS | 25.0% |
| ! | TCACACATAATCAAAATCAA+AGG | + | chr4.2:2903185-2903204 | None:intergenic | 25.0% |
| ! | TTACATAATTCAGATGCTAT+TGG | - | chr4.2:2901612-2901631 | MS.gene05963:CDS | 25.0% |
| ! | TTATATGTAACTGACTAACT+AGG | + | chr4.2:2901803-2901822 | None:intergenic | 25.0% |
| ! | TTTACCTCTTGTGTAAAATA+GGG | + | chr4.2:2902966-2902985 | None:intergenic | 25.0% |
| ! | TTTGTTAGTTACAGATATGA+TGG | + | chr4.2:2904430-2904449 | None:intergenic | 25.0% |
| !! | ATACAGAAAGGATCAAATTT+TGG | + | chr4.2:2904347-2904366 | None:intergenic | 25.0% |
| !! | ATTGAAAAGTGTAGCATTTA+AGG | - | chr4.2:2903033-2903052 | MS.gene05963:intron | 25.0% |
| !! | TTAATGTATTCAGTCTTTTC+TGG | - | chr4.2:2901702-2901721 | MS.gene05963:intron | 25.0% |
| !! | TTATTACTATCTGATTCGTA+CGG | - | chr4.2:2905074-2905093 | MS.gene05963:CDS | 25.0% |
| !! | TTTTACCTCTTGTGTAAAAT+AGG | + | chr4.2:2902967-2902986 | None:intergenic | 25.0% |
| !! | TTTTGGACAAGAAAAAACTT+CGG | + | chr4.2:2904330-2904349 | None:intergenic | 25.0% |
| !!! | ATGTCCCTATTTACTTTTTT+AGG | + | chr4.2:2902558-2902577 | None:intergenic | 25.0% |
| !!! | TGGCTTATTTTTTACTCTTT+TGG | - | chr4.2:2903157-2903176 | MS.gene05963:intron | 25.0% |
| !!! | TTTTTTAGTAGGTAAAACGT+GGG | - | chr4.2:2904021-2904040 | MS.gene05963:intron | 25.0% |
| !!! | TTTTTTATCAAGTAGCTTAG+TGG | + | chr4.2:2904163-2904182 | None:intergenic | 25.0% |
| !!! | TTTTTTCAATTGGTCATATC+AGG | + | chr4.2:2903986-2904005 | None:intergenic | 25.0% |
| !!! | TTTTTTTAGTAGGTAAAACG+TGG | - | chr4.2:2904020-2904039 | MS.gene05963:intron | 25.0% |
| AATCCCTTCTGTTGAAATTT+GGG | + | chr4.2:2903842-2903861 | None:intergenic | 30.0% | |
| ACCTCTTAAAGGTGAATAAA+TGG | + | chr4.2:2904130-2904149 | None:intergenic | 30.0% | |
| ACTAACTGCTATGTTTAGTT+AGG | - | chr4.2:2904449-2904468 | MS.gene05963:intron | 30.0% | |
| AGCGATTGATGAATTATCTA+AGG | + | chr4.2:2902222-2902241 | None:intergenic | 30.0% | |
| ATGTTTAGTTAGGGCAATTA+AGG | - | chr4.2:2904459-2904478 | MS.gene05963:intron | 30.0% | |
| ATTATATAGTGTATAGGAGC+TGG | - | chr4.2:2902448-2902467 | MS.gene05963:intron | 30.0% | |
| CAATATGGGTAAGATTCAAA+GGG | + | chr4.2:2902082-2902101 | None:intergenic | 30.0% | |
| CATCAATACTTGTGATTTGA+GGG | + | chr4.2:2902258-2902277 | None:intergenic | 30.0% | |
| CTAACTGCTATGTTTAGTTA+GGG | - | chr4.2:2904450-2904469 | MS.gene05963:intron | 30.0% | |
| CTGATACCATGTTGAAATTT+GGG | + | chr4.2:2903657-2903676 | None:intergenic | 30.0% | |
| CTTGAGAAGAGAATATAAAG+AGG | - | chr4.2:2903770-2903789 | MS.gene05963:intron | 30.0% | |
| GAATAAATGGAGAATGATGA+AGG | - | chr4.2:2903521-2903540 | MS.gene05963:intron | 30.0% | |
| GGATTCCAAATTCATCAAAA+TGG | + | chr4.2:2904896-2904915 | None:intergenic | 30.0% | |
| GGTAATGTAACTAAGGAATA+AGG | - | chr4.2:2902138-2902157 | MS.gene05963:intron | 30.0% | |
| GGTGACAGGATAAAAATATA+AGG | + | chr4.2:2904309-2904328 | None:intergenic | 30.0% | |
| TACCAATTGAGATAAACTCA+CGG | + | chr4.2:2904057-2904076 | None:intergenic | 30.0% | |
| TCAGCAGTAAATAGACTAAA+TGG | - | chr4.2:2900942-2900961 | MS.gene05963:intron | 30.0% | |
| TCATCAATACTTGTGATTTG+AGG | + | chr4.2:2902259-2902278 | None:intergenic | 30.0% | |
| TCCATTTATTCACCTTTAAG+AGG | - | chr4.2:2904126-2904145 | MS.gene05963:intron | 30.0% | |
| TCGGTTTAATACATACAGAA+AGG | + | chr4.2:2904359-2904378 | None:intergenic | 30.0% | |
| TCTGATACCATGTTGAAATT+TGG | + | chr4.2:2903658-2903677 | None:intergenic | 30.0% | |
| TGACTCCATATTATTTGTGA+CGG | - | chr4.2:2901835-2901854 | MS.gene05963:intron | 30.0% | |
| TGAGTTTATCTCAATTGGTA+GGG | - | chr4.2:2904057-2904076 | MS.gene05963:intron | 30.0% | |
| TGATACCATGTTGAAATTTG+GGG | + | chr4.2:2903656-2903675 | None:intergenic | 30.0% | |
| TGTTTAGTTAGGGCAATTAA+GGG | - | chr4.2:2904460-2904479 | MS.gene05963:intron | 30.0% | |
| TTATGTTGGCCAATGTTTAT+AGG | - | chr4.2:2902117-2902136 | MS.gene05963:intron | 30.0% | |
| TTTGTGACAGTATTCATAGA+AGG | + | chr4.2:2902724-2902743 | None:intergenic | 30.0% | |
| ! | AATAGCTTCCAAGTACTTTT+TGG | + | chr4.2:2905189-2905208 | None:intergenic | 30.0% |
| ! | ATGGTTGTTTCAGAAGATAT+AGG | - | chr4.2:2905115-2905134 | MS.gene05963:CDS | 30.0% |
| ! | ATGTTTGTTACACTGATCAA+AGG | + | chr4.2:2904493-2904512 | None:intergenic | 30.0% |
| ! | CTTGAGAAGAGTATATAAAG+AGG | - | chr4.2:2903585-2903604 | MS.gene05963:intron | 30.0% |
| ! | GTCTTCTTTTCCATTTTGTA+TGG | - | chr4.2:2901490-2901509 | MS.gene05963:intron | 30.0% |
| ! | TACAATAATACCGGCATTTT+TGG | - | chr4.2:2902034-2902053 | MS.gene05963:intron | 30.0% |
| ! | TGTTTGTTACACTGATCAAA+GGG | + | chr4.2:2904492-2904511 | None:intergenic | 30.0% |
| ! | TTAGTTACAGATATGATGGA+AGG | + | chr4.2:2904426-2904445 | None:intergenic | 30.0% |
| ! | TTCTTTTCCATTTTGTATGG+TGG | - | chr4.2:2901493-2901512 | MS.gene05963:intron | 30.0% |
| !! | AAGTTTTGACATATGGTGAA+AGG | - | chr4.2:2905143-2905162 | MS.gene05963:CDS | 30.0% |
| !! | ATGTCATTCCAAAAAGTACT+TGG | - | chr4.2:2905178-2905197 | MS.gene05963:CDS | 30.0% |
| !!! | ATCTGCCATTTTGATGAATT+TGG | - | chr4.2:2904888-2904907 | MS.gene05963:CDS | 30.0% |
| AACATTCCTTTAATTGCCAG+AGG | - | chr4.2:2901369-2901388 | MS.gene05963:intron | 35.0% | |
| ACCAAAAATTGTCCTTACTC+AGG | - | chr4.2:2905264-2905283 | MS.gene05963:intron | 35.0% | |
| ACCAATTGAGATAAACTCAC+GGG | + | chr4.2:2904056-2904075 | None:intergenic | 35.0% | |
| AGATGGATATACAAGCTCAA+TGG | + | chr4.2:2904552-2904571 | None:intergenic | 35.0% | |
| AGGTGAATAAATGGAGTGTA+CGG | + | chr4.2:2904121-2904140 | None:intergenic | 35.0% | |
| ATAATTCAGATGCTATTGGG+AGG | - | chr4.2:2901616-2901635 | MS.gene05963:CDS | 35.0% | |
| ATCCCTTCTGTTGAAATTTG+GGG | + | chr4.2:2903841-2903860 | None:intergenic | 35.0% | |
| ATCGTTGTCAAAGTGAAACA+GGG | - | chr4.2:2901261-2901280 | MS.gene05963:intron | 35.0% | |
| ATGTTAGACTTGACAAATGC+TGG | + | chr4.2:2901354-2901373 | None:intergenic | 35.0% | |
| CAATCCCTTCTGTTGAAATT+TGG | + | chr4.2:2903843-2903862 | None:intergenic | 35.0% | |
| CCAAACCGTCACAAATAATA+TGG | + | chr4.2:2901843-2901862 | None:intergenic | 35.0% | |
| CCAATATGGGTAAGATTCAA+AGG | + | chr4.2:2902083-2902102 | None:intergenic | 35.0% | |
| CCATATTATTTGTGACGGTT+TGG | - | chr4.2:2901840-2901859 | MS.gene05963:intron | 35.0% | |
| CCTTTGAATCTTACCCATAT+TGG | - | chr4.2:2902080-2902099 | MS.gene05963:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | + | chr4.2:2903632-2903651 | None:intergenic | 35.0% | |
| CTAATAAAAGACTCTGCAGA+CGG | + | chr4.2:2904605-2904624 | None:intergenic | 35.0% | |
| CTCATTAGCTGCAATATCAA+TGG | + | chr4.2:2904700-2904719 | None:intergenic | 35.0% | |
| CTCTTGTGTAAAATAGGGTA+AGG | + | chr4.2:2902961-2902980 | None:intergenic | 35.0% | |
| CTTACCCATATTGGAGATAT+TGG | - | chr4.2:2902089-2902108 | MS.gene05963:intron | 35.0% | |
| GAGAAGAGAATATAAAGAGG+AGG | - | chr4.2:2903773-2903792 | MS.gene05963:intron | 35.0% | |
| GATAATCAAGACCTGAAGAA+CGG | + | chr4.2:2901462-2901481 | None:intergenic | 35.0% | |
| GCTAGAAATTCACCTCTTAA+AGG | + | chr4.2:2904141-2904160 | None:intergenic | 35.0% | |
| GCTTGAAATAGGTTCAAGAA+TGG | - | chr4.2:2901515-2901534 | MS.gene05963:intron | 35.0% | |
| GCTTTCAAAAAATCTTCCAC+AGG | + | chr4.2:2905293-2905312 | None:intergenic | 35.0% | |
| GTGAGTTTATCTCAATTGGT+AGG | - | chr4.2:2904056-2904075 | MS.gene05963:intron | 35.0% | |
| TAAATCGGACAAAAGAGGTT+CGG | + | chr4.2:2901189-2901208 | None:intergenic | 35.0% | |
| TAAGAAATAAAAGGGCAACC+CGG | - | chr4.2:2902869-2902888 | MS.gene05963:intron | 35.0% | |
| TATCGTTGTCAAAGTGAAAC+AGG | - | chr4.2:2901260-2901279 | MS.gene05963:intron | 35.0% | |
| TCATTTAAACATCTGGGTCT+TGG | - | chr4.2:2903297-2903316 | MS.gene05963:intron | 35.0% | |
| TCCACAAGTTCATTCGATAT+CGG | - | chr4.2:2901997-2902016 | MS.gene05963:intron | 35.0% | |
| TGTACAATACACCAAATGGT+GGG | + | chr4.2:2902935-2902954 | None:intergenic | 35.0% | |
| TTCAAATGCCAGAGCAAAAT+GGG | + | chr4.2:2901396-2901415 | None:intergenic | 35.0% | |
| TTCTCGTTCATGTACAGAAA+AGG | + | chr4.2:2904230-2904249 | None:intergenic | 35.0% | |
| TTTCAAGCCACCATACAAAA+TGG | + | chr4.2:2901503-2901522 | None:intergenic | 35.0% | |
| TTTGTATGGTGGCTTGAAAT+AGG | - | chr4.2:2901504-2901523 | MS.gene05963:intron | 35.0% | |
| ! | ATGGAGAATGATGAAGGTAT+TGG | - | chr4.2:2903527-2903546 | MS.gene05963:intron | 35.0% |
| ! | CTTACCCTATTTTACACAAG+AGG | - | chr4.2:2902959-2902978 | MS.gene05963:intron | 35.0% |
| ! | GAGAAGAGTATATAAAGAGG+AGG | - | chr4.2:2903588-2903607 | MS.gene05963:intron | 35.0% |
| ! | GTACTTGATGTGTTTTCAGA+TGG | - | chr4.2:2905096-2905115 | MS.gene05963:CDS | 35.0% |
| ! | TCCTGAGTAAGGACAATTTT+TGG | + | chr4.2:2905268-2905287 | None:intergenic | 35.0% |
| ! | TGAGATGGATTTACATACTC+TGG | + | chr4.2:2904917-2904936 | None:intergenic | 35.0% |
| !! | GGAAGACAAGTTTTGACATA+TGG | - | chr4.2:2905136-2905155 | MS.gene05963:CDS | 35.0% |
| !! | TATGTGTGATTTTGGCACTT+TGG | - | chr4.2:2903196-2903215 | MS.gene05963:intron | 35.0% |
| !! | TGATTTTGGCACTTTGGTTT+TGG | - | chr4.2:2903202-2903221 | MS.gene05963:intron | 35.0% |
| !! | TGGAGAATGATGAAGGTATT+GGG | - | chr4.2:2903528-2903547 | MS.gene05963:intron | 35.0% |
| !!! | ATTCATTCTGCTGGTTTTTC+TGG | - | chr4.2:2900888-2900907 | MS.gene05963:intron | 35.0% |
| !!! | GGAAGATTTTTTGAAAGCAG+TGG | - | chr4.2:2905295-2905314 | MS.gene05963:intron | 35.0% |
| !!! | GTGTGTGCACTTTTTTTAGT+AGG | - | chr4.2:2904010-2904029 | MS.gene05963:intron | 35.0% |
| !!! | TATACTGATTTTGGCTCTTC+AGG | + | chr4.2:2901227-2901246 | None:intergenic | 35.0% |
| AAAGGTCCCTCAAATTCCAA+CGG | + | chr4.2:2904212-2904231 | None:intergenic | 40.0% | |
| AAAGTCTCCGTTGGAATTTG+AGG | - | chr4.2:2904202-2904221 | MS.gene05963:intron | 40.0% | |
| AAGTCTCCGTTGGAATTTGA+GGG | - | chr4.2:2904203-2904222 | MS.gene05963:intron | 40.0% | |
| AATAGATCGCAGACATCAGA+TGG | + | chr4.2:2904569-2904588 | None:intergenic | 40.0% | |
| ACAATGGCATCATATGGAGA+TGG | - | chr4.2:2905377-2905396 | MS.gene05963:CDS | 40.0% | |
| ACACATTGAAGTCAGGGTTA+TGG | + | chr4.2:2902191-2902210 | None:intergenic | 40.0% | |
| AGGGTTATGGTCTGCTTTAA+GGG | + | chr4.2:2902178-2902197 | None:intergenic | 40.0% | |
| AGTGGACGAAGTAACTTTGA+AGG | - | chr4.2:2905313-2905332 | MS.gene05963:intron | 40.0% | |
| ATTGTAATATGCATGTGCCG+GGG | - | chr4.2:2904087-2904106 | MS.gene05963:intron | 40.0% | |
| CAAAGCCAACATACACACTA+AGG | + | chr4.2:2902298-2902317 | None:intergenic | 40.0% | |
| CAAGAAAAAACTTCGGTGAC+AGG | + | chr4.2:2904323-2904342 | None:intergenic | 40.0% | |
| CATTGTAATATGCATGTGCC+GGG | - | chr4.2:2904086-2904105 | MS.gene05963:intron | 40.0% | |
| CCAAAATCAGTATACACAGG+TGG | - | chr4.2:2901233-2901252 | MS.gene05963:intron | 40.0% | |
| CCAATTGAGATAAACTCACG+GGG | + | chr4.2:2904055-2904074 | None:intergenic | 40.0% | |
| CCTCAAGTTTCATATGAGAG+CGG | + | chr4.2:2902494-2902513 | None:intergenic | 40.0% | |
| CGCTCTCATATGAAACTTGA+GGG | - | chr4.2:2902492-2902511 | MS.gene05963:intron | 40.0% | |
| GACTTGGATACCAAAAATGC+CGG | + | chr4.2:2902047-2902066 | None:intergenic | 40.0% | |
| GAGCCAAAATCAGTATACAC+AGG | - | chr4.2:2901230-2901249 | MS.gene05963:intron | 40.0% | |
| GCATAACTTGAAGGATGCTA+TGG | - | chr4.2:2901430-2901449 | MS.gene05963:intron | 40.0% | |
| GCATTGTAATATGCATGTGC+CGG | - | chr4.2:2904085-2904104 | MS.gene05963:intron | 40.0% | |
| GCTGTGTACAATACACCAAA+TGG | + | chr4.2:2902939-2902958 | None:intergenic | 40.0% | |
| GGTGAATAAATGGAGTGTAC+GGG | + | chr4.2:2904120-2904139 | None:intergenic | 40.0% | |
| GTAAATAGGGACATCTGTTC+TGG | - | chr4.2:2902564-2902583 | MS.gene05963:intron | 40.0% | |
| GTCATGTTAACAAGTGCTCT+AGG | + | chr4.2:2903126-2903145 | None:intergenic | 40.0% | |
| GTGAATAAATGGAGTGTACG+GGG | + | chr4.2:2904119-2904138 | None:intergenic | 40.0% | |
| GTGTACAATACACCAAATGG+TGG | + | chr4.2:2902936-2902955 | None:intergenic | 40.0% | |
| GTTCAAATGCCAGAGCAAAA+TGG | + | chr4.2:2901397-2901416 | None:intergenic | 40.0% | |
| TCCTAGACACATTGAAGTCA+GGG | + | chr4.2:2902197-2902216 | None:intergenic | 40.0% | |
| TCGTTGTCAAAGTGAAACAG+GGG | - | chr4.2:2901262-2901281 | MS.gene05963:intron | 40.0% | |
| TGATGCCTTAGTGTGTATGT+TGG | - | chr4.2:2902290-2902309 | MS.gene05963:intron | 40.0% | |
| TGTCTTCAGCTTATTATCCG+TGG | - | chr4.2:2902352-2902371 | MS.gene05963:intron | 40.0% | |
| TTAGGCCCCAAATTTCAACA+TGG | - | chr4.2:2903648-2903667 | MS.gene05963:intron | 40.0% | |
| TTAGTAGGTAAAACGTGGGA+AGG | - | chr4.2:2904025-2904044 | MS.gene05963:intron | 40.0% | |
| TTTCAGTCAGTAGTGCTCTT+GGG | + | chr4.2:2903229-2903248 | None:intergenic | 40.0% | |
| ! | AGAGTCTTATCTATCCGATG+TGG | + | chr4.2:2903567-2903586 | None:intergenic | 40.0% |
| ! | GAGTCTTATCTATCCGATGT+GGG | + | chr4.2:2903566-2903585 | None:intergenic | 40.0% |
| ! | TAGCAAGTCTTGAGGGTTTT+TGG | + | chr4.2:2900859-2900878 | None:intergenic | 40.0% |
| ! | TTTTCAGTCAGTAGTGCTCT+TGG | + | chr4.2:2903230-2903249 | None:intergenic | 40.0% |
| !! | AAACCCTCAAGACTTGCTAT+TGG | - | chr4.2:2900860-2900879 | MS.gene05963:intron | 40.0% |
| !! | AGCTAAAAGAGGATTAGCCA+AGG | + | chr4.2:2900916-2900935 | None:intergenic | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | - | chr4.2:2903630-2903649 | MS.gene05963:intron | 40.0% |
| !! | CTTAGTGTGTATGTTGGCTT+TGG | - | chr4.2:2902296-2902315 | MS.gene05963:intron | 40.0% |
| !! | GCTGATTCTGAAGCTAAAAG+AGG | + | chr4.2:2900927-2900946 | None:intergenic | 40.0% |
| !! | TAATGCTGCTTTCTTTGCCT+TGG | - | chr4.2:2902792-2902811 | MS.gene05963:intron | 40.0% |
| !! | TGTTGGCTTTGGTAGGTTTA+TGG | - | chr4.2:2902307-2902326 | MS.gene05963:intron | 40.0% |
| !!! | CCACCTGTGTATACTGATTT+TGG | + | chr4.2:2901236-2901255 | None:intergenic | 40.0% |
| !!! | TATGGTTTTGACCGTTCTTC+AGG | - | chr4.2:2901448-2901467 | MS.gene05963:CDS | 40.0% |
| ACCCTGACTTCAATGTGTCT+AGG | - | chr4.2:2902193-2902212 | MS.gene05963:intron | 45.0% | |
| ACGTGGAACACTGGGTAAAT+CGG | + | chr4.2:2901204-2901223 | None:intergenic | 45.0% | |
| AGGCCCCAAATTTCAACAGA+AGG | - | chr4.2:2903835-2903854 | MS.gene05963:intron | 45.0% | |
| AGGGACTTACTGTTGTGACT+TGG | + | chr4.2:2902063-2902082 | None:intergenic | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | + | chr4.2:2903559-2903578 | None:intergenic | 45.0% | |
| ATGGGTCCTCTGGCAATTAA+AGG | + | chr4.2:2901378-2901397 | None:intergenic | 45.0% | |
| ATTCAGATGCTATTGGGAGG+CGG | - | chr4.2:2901619-2901638 | MS.gene05963:CDS | 45.0% | |
| CAATGTACCTTGTCCAGAAG+TGG | + | chr4.2:2904736-2904755 | None:intergenic | 45.0% | |
| CAGGGTTATGGTCTGCTTTA+AGG | + | chr4.2:2902179-2902198 | None:intergenic | 45.0% | |
| CATTTCGTCACCTCTCACAA+TGG | - | chr4.2:2905361-2905380 | MS.gene05963:intron | 45.0% | |
| CCATATGATGCCATTGTGAG+AGG | + | chr4.2:2905374-2905393 | None:intergenic | 45.0% | |
| CCCCGTGAGTTTATCTCAAT+TGG | - | chr4.2:2904052-2904071 | MS.gene05963:intron | 45.0% | |
| CCGCTCTCATATGAAACTTG+AGG | - | chr4.2:2902491-2902510 | MS.gene05963:intron | 45.0% | |
| CCTCCAATAGCAAGTCTTGA+GGG | + | chr4.2:2900866-2900885 | None:intergenic | 45.0% | |
| CCTCTCACAATGGCATCATA+TGG | - | chr4.2:2905371-2905390 | MS.gene05963:CDS | 45.0% | |
| CGAATAGTACTTGCAGCTTC+TGG | - | chr4.2:2901134-2901153 | MS.gene05963:intron | 45.0% | |
| CTCCTAGACACATTGAAGTC+AGG | + | chr4.2:2902198-2902217 | None:intergenic | 45.0% | |
| CTGAAAGTGAAGGCTGAGAT+TGG | - | chr4.2:2900825-2900844 | MS.gene05963:CDS | 45.0% | |
| CTGGGTAAATCGGACAAAAG+AGG | + | chr4.2:2901194-2901213 | None:intergenic | 45.0% | |
| CTGGTAAAGGGATGTATTCG+CGG | - | chr4.2:2901665-2901684 | MS.gene05963:intron | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | - | chr4.2:2903550-2903569 | MS.gene05963:intron | 45.0% | |
| GAAGCTGCAAGTACTATTCG+AGG | + | chr4.2:2901134-2901153 | None:intergenic | 45.0% | |
| GCCGATATCGAATGAACTTG+TGG | + | chr4.2:2902001-2902020 | None:intergenic | 45.0% | |
| GCTTTCGTTTGCAGTTGATC+AGG | - | chr4.2:2904834-2904853 | MS.gene05963:intron | 45.0% | |
| GGCCCCAAATTTCAACAGAA+GGG | - | chr4.2:2903836-2903855 | MS.gene05963:intron | 45.0% | |
| TATCTATCCGATGTGGGACT+TGG | + | chr4.2:2903560-2903579 | None:intergenic | 45.0% | |
| TTCCACAGGTTTCCTGAGTA+AGG | + | chr4.2:2905279-2905298 | None:intergenic | 45.0% | |
| TTGGAGGCAATTCATTCTGC+TGG | - | chr4.2:2900879-2900898 | MS.gene05963:intron | 45.0% | |
| ! | ATTCTCACAGTTGCCACTTC+TGG | - | chr4.2:2904720-2904739 | MS.gene05963:intron | 45.0% |
| ! | CTTGGTGCGTGAATAGGTTT+AGG | + | chr4.2:2903685-2903704 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr4.2:2903623-2903642 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr4.2:2903620-2903639 | MS.gene05963:intron | 45.0% |
| !! | GGCAGATTTCGTAGCTTGTT+TGG | + | chr4.2:2904875-2904894 | None:intergenic | 45.0% |
| !! | GTGTGTATGTTGGCTTTGGT+AGG | - | chr4.2:2902300-2902319 | MS.gene05963:intron | 45.0% |
| !!! | AATAAATATAAACATATTTT+AGG | + | chr4.2:2901556-2901575 | None:intergenic | 5.0% |
| AGCGGATAACCTGAACAGCT+TGG | + | chr4.2:2902476-2902495 | None:intergenic | 50.0% | |
| CGCGAATACATCCCTTTACC+AGG | + | chr4.2:2901667-2901686 | None:intergenic | 50.0% | |
| CTGGCATTTGAACTTCCTGG+CGG | - | chr4.2:2901404-2901423 | MS.gene05963:intron | 50.0% | |
| GCAATCCTCACCTTACAAGC+CGG | - | chr4.2:2903610-2903629 | MS.gene05963:intron | 50.0% | |
| GCCTCCAATAGCAAGTCTTG+AGG | + | chr4.2:2900867-2900886 | None:intergenic | 50.0% | |
| GCGGATAACCTGAACAGCTT+GGG | + | chr4.2:2902475-2902494 | None:intergenic | 50.0% | |
| GCTCTGGCATTTGAACTTCC+TGG | - | chr4.2:2901401-2901420 | MS.gene05963:intron | 50.0% | |
| GGAAGGTAGAAAGTCTCCGT+TGG | - | chr4.2:2904193-2904212 | MS.gene05963:intron | 50.0% | |
| GGACAAAAGAGGTTCGGCAA+TGG | + | chr4.2:2901183-2901202 | None:intergenic | 50.0% | |
| GTAGGTAAAACGTGGGAAGG+TGG | - | chr4.2:2904028-2904047 | MS.gene05963:intron | 50.0% | |
| GTCCTTACTCAGGAAACCTG+TGG | - | chr4.2:2905274-2905293 | MS.gene05963:intron | 50.0% | |
| GTGGATCATTCTCAGCTGGT+GGG | - | chr4.2:2901641-2901660 | MS.gene05963:CDS | 50.0% | |
| TCTTCAGGACGTGGAACACT+GGG | + | chr4.2:2901212-2901231 | None:intergenic | 50.0% | |
| ! | ACAGTTGCCACTTCTGGACA+AGG | - | chr4.2:2904726-2904745 | MS.gene05963:intron | 50.0% |
| ! | AGCTTCTGGTGTTGAGCATG+AGG | - | chr4.2:2901148-2901167 | MS.gene05963:intron | 50.0% |
| ! | GCTGCTTTCTTTGCCTTGGT+TGG | - | chr4.2:2902796-2902815 | MS.gene05963:intron | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr4.2:2903618-2903637 | None:intergenic | 50.0% |
| !! | CCCTCAAGACTTGCTATTGG+AGG | - | chr4.2:2900863-2900882 | MS.gene05963:intron | 50.0% |
| !! | CTGCTCACTGATTCGTAGCT+TGG | + | chr4.2:2905494-2905513 | None:intergenic | 50.0% |
| !! | TTTGGGCTTGGTGCGTGAAT+AGG | + | chr4.2:2903691-2903710 | None:intergenic | 50.0% |
| !!! | GATTTTGGCTCTTCAGGACG+TGG | + | chr4.2:2901221-2901240 | None:intergenic | 50.0% |
| !!! | TGCTGGTTTTTCTGGTGCCT+TGG | - | chr4.2:2900896-2900915 | MS.gene05963:intron | 50.0% |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr4.2:2902895-2902914 | MS.gene05963:intron | 55.0% | |
| AGTGTACGGGGTTCAAACCC+CGG | + | chr4.2:2904107-2904126 | None:intergenic | 55.0% | |
| CATTTGAACTTCCTGGCGGC+TGG | - | chr4.2:2901408-2901427 | MS.gene05963:intron | 55.0% | |
| CCAGAGCAAAATGGGTCCTC+TGG | + | chr4.2:2901388-2901407 | None:intergenic | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr4.2:2902896-2902915 | MS.gene05963:intron | 55.0% | |
| CTCTTCAGGACGTGGAACAC+TGG | + | chr4.2:2901213-2901232 | None:intergenic | 55.0% | |
| GGTGGATCATTCTCAGCTGG+TGG | - | chr4.2:2901640-2901659 | MS.gene05963:CDS | 55.0% | |
| TGGCGGCTGGCATAACTTGA+AGG | - | chr4.2:2901421-2901440 | MS.gene05963:intron | 55.0% | |
| ! | CCAGAGGACCCATTTTGCTC+TGG | - | chr4.2:2901385-2901404 | MS.gene05963:intron | 55.0% |
| ! | TTCAAGTTATGCCAGCCGCC+AGG | + | chr4.2:2901422-2901441 | None:intergenic | 55.0% |
| !! | AAGCCCAAAGAGTGCTGAGG+GGG | - | chr4.2:2903702-2903721 | MS.gene05963:intron | 55.0% |
| !! | ACCAAGCCCAAAGAGTGCTG+AGG | - | chr4.2:2903699-2903718 | MS.gene05963:intron | 55.0% |
| !! | CAAGCCCAAAGAGTGCTGAG+GGG | - | chr4.2:2903701-2903720 | MS.gene05963:intron | 55.0% |
| !! | CCAAGCCCAAAGAGTGCTGA+GGG | - | chr4.2:2903700-2903719 | MS.gene05963:intron | 55.0% |
| ACCCCCCCTCAGCACTCTTT+GGG | + | chr4.2:2903708-2903727 | None:intergenic | 60.0% | |
| CAGATGCTATTGGGAGGCGG+TGG | - | chr4.2:2901622-2901641 | MS.gene05963:CDS | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr4.2:2902908-2902927 | MS.gene05963:intron | 60.0% | |
| CCCTCAGCACTCTTTGGGCT+TGG | + | chr4.2:2903703-2903722 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr4.2:2902908-2902927 | None:intergenic | 60.0% | |
| GAGCTGGACCCAAGCTGTTC+AGG | - | chr4.2:2902464-2902483 | MS.gene05963:intron | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr4.2:2902907-2902926 | MS.gene05963:intron | 60.0% | |
| GGCGGTGGATCATTCTCAGC+TGG | - | chr4.2:2901637-2901656 | MS.gene05963:CDS | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr4.2:2902907-2902926 | None:intergenic | 60.0% | |
| ! | AGTGCTGAGGGGGGGTGTAT+TGG | - | chr4.2:2903712-2903731 | MS.gene05963:intron | 60.0% |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr4.2:2902891-2902910 | None:intergenic | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr4.2:2902923-2902942 | None:intergenic | 60.0% |
| ! | CAGCTGGTGGGCCTGGTAAA+GGG | - | chr4.2:2901653-2901672 | MS.gene05963:CDS | 60.0% |
| ! | GTGCTGAGGGGGGGTGTATT+GGG | - | chr4.2:2903713-2903732 | MS.gene05963:intron | 60.0% |
| ! | TCAGCTGGTGGGCCTGGTAA+AGG | - | chr4.2:2901652-2901671 | MS.gene05963:CDS | 60.0% |
| ! | TCATTCTCAGCTGGTGGGCC+TGG | - | chr4.2:2901646-2901665 | MS.gene05963:CDS | 60.0% |
| !! | AGCCCAAAGAGTGCTGAGGG+GGG | - | chr4.2:2903703-2903722 | MS.gene05963:intron | 60.0% |
| CACCCCCCCTCAGCACTCTT+TGG | + | chr4.2:2903709-2903728 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr4.2:2902906-2902925 | MS.gene05963:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr4.2:2902921-2902940 | MS.gene05963:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr4.2:2902902-2902921 | MS.gene05963:intron | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr4.2:2902901-2902920 | MS.gene05963:intron | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr4.2:2902890-2902909 | None:intergenic | 65.0% |
| !! | GCCCAAAGAGTGCTGAGGGG+GGG | - | chr4.2:2903704-2903723 | MS.gene05963:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 2900822 | 2905532 | 2900822 | ID=MS.gene05963 |
| chr4.2 | mRNA | 2900822 | 2905532 | 2900822 | ID=MS.gene05963.t1;Parent=MS.gene05963 |
| chr4.2 | exon | 2905365 | 2905532 | 2905365 | ID=MS.gene05963.t1.exon1;Parent=MS.gene05963.t1 |
| chr4.2 | CDS | 2905365 | 2905532 | 2905365 | ID=cds.MS.gene05963.t1;Parent=MS.gene05963.t1 |
| chr4.2 | exon | 2905071 | 2905238 | 2905071 | ID=MS.gene05963.t1.exon2;Parent=MS.gene05963.t1 |
| chr4.2 | CDS | 2905071 | 2905238 | 2905071 | ID=cds.MS.gene05963.t1;Parent=MS.gene05963.t1 |
| chr4.2 | exon | 2904885 | 2904965 | 2904885 | ID=MS.gene05963.t1.exon3;Parent=MS.gene05963.t1 |
| chr4.2 | CDS | 2904885 | 2904965 | 2904885 | ID=cds.MS.gene05963.t1;Parent=MS.gene05963.t1 |
| chr4.2 | exon | 2904663 | 2904729 | 2904663 | ID=MS.gene05963.t1.exon4;Parent=MS.gene05963.t1 |
| chr4.2 | CDS | 2904663 | 2904729 | 2904663 | ID=cds.MS.gene05963.t1;Parent=MS.gene05963.t1 |
| chr4.2 | exon | 2904282 | 2904379 | 2904282 | ID=MS.gene05963.t1.exon5;Parent=MS.gene05963.t1 |
| chr4.2 | CDS | 2904282 | 2904379 | 2904282 | ID=cds.MS.gene05963.t1;Parent=MS.gene05963.t1 |
| chr4.2 | exon | 2901607 | 2901679 | 2901607 | ID=MS.gene05963.t1.exon6;Parent=MS.gene05963.t1 |
| chr4.2 | CDS | 2901607 | 2901679 | 2901607 | ID=cds.MS.gene05963.t1;Parent=MS.gene05963.t1 |
| chr4.2 | exon | 2901436 | 2901506 | 2901436 | ID=MS.gene05963.t1.exon7;Parent=MS.gene05963.t1 |
| chr4.2 | CDS | 2901436 | 2901506 | 2901436 | ID=cds.MS.gene05963.t1;Parent=MS.gene05963.t1 |
| chr4.2 | exon | 2901190 | 2901239 | 2901190 | ID=MS.gene05963.t1.exon8;Parent=MS.gene05963.t1 |
| chr4.2 | CDS | 2901190 | 2901239 | 2901190 | ID=cds.MS.gene05963.t1;Parent=MS.gene05963.t1 |
| chr4.2 | exon | 2900956 | 2901068 | 2900956 | ID=MS.gene05963.t1.exon9;Parent=MS.gene05963.t1 |
| chr4.2 | CDS | 2900956 | 2901068 | 2900956 | ID=cds.MS.gene05963.t1;Parent=MS.gene05963.t1 |
| chr4.2 | exon | 2900822 | 2900874 | 2900822 | ID=MS.gene05963.t1.exon10;Parent=MS.gene05963.t1 |
| chr4.2 | CDS | 2900822 | 2900874 | 2900822 | ID=cds.MS.gene05963.t1;Parent=MS.gene05963.t1 |
| Gene Sequence |
| Protein sequence |
