Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059797.t1 | RHN75081.1 | 91.1 | 360 | 19 | 2 | 1 | 348 | 1 | 359 | 5.10E-189 | 670.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059797.t1 | Q9FJ45 | 42.0 | 374 | 178 | 11 | 1 | 339 | 1 | 370 | 5.7e-72 | 272.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059797.t1 | A0A396JEK6 | 91.1 | 360 | 19 | 2 | 1 | 348 | 1 | 359 | 3.6e-189 | 670.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene059797 | MS.gene002555 | PPI |
| MS.gene004228 | MS.gene059797 | PPI |
| MS.gene54327 | MS.gene059797 | PPI |
| MS.gene01536 | MS.gene059797 | PPI |
| MS.gene059797 | MS.gene004229 | PPI |
| MS.gene01537 | MS.gene059797 | PPI |
| MS.gene01535 | MS.gene059797 | PPI |
| MS.gene059797 | MS.gene54326 | PPI |
| MS.gene002553 | MS.gene059797 | PPI |
| MS.gene004227 | MS.gene059797 | PPI |
| MS.gene059797 | MS.gene002554 | PPI |
| MS.gene54325 | MS.gene059797 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059797.t1 | MTR_0029s0050 | 90.000 | 360 | 23 | 2 | 1 | 348 | 1 | 359 | 0.0 | 660 |
| MS.gene059797.t1 | MTR_2g079090 | 90.556 | 360 | 21 | 2 | 1 | 348 | 1 | 359 | 0.0 | 659 |
| MS.gene059797.t1 | MTR_2g079080 | 90.000 | 360 | 23 | 2 | 1 | 348 | 1 | 359 | 0.0 | 655 |
| MS.gene059797.t1 | MTR_0029s0100 | 89.444 | 360 | 25 | 2 | 1 | 348 | 1 | 359 | 0.0 | 654 |
| MS.gene059797.t1 | MTR_3g448360 | 67.024 | 373 | 94 | 8 | 1 | 347 | 1 | 370 | 2.11e-170 | 479 |
| MS.gene059797.t1 | MTR_3g069780 | 66.667 | 375 | 94 | 9 | 1 | 348 | 1 | 371 | 7.68e-166 | 467 |
| MS.gene059797.t1 | MTR_3g438030 | 66.400 | 375 | 95 | 9 | 1 | 348 | 1 | 371 | 1.31e-165 | 467 |
| MS.gene059797.t1 | MTR_3g069520 | 63.904 | 374 | 104 | 8 | 1 | 348 | 1 | 369 | 8.74e-161 | 454 |
| MS.gene059797.t1 | MTR_3g463960 | 61.140 | 386 | 109 | 7 | 3 | 348 | 4 | 388 | 1.98e-160 | 454 |
| MS.gene059797.t1 | MTR_3g463950 | 61.140 | 386 | 109 | 7 | 3 | 348 | 4 | 388 | 1.98e-160 | 454 |
| MS.gene059797.t1 | MTR_3g463970 | 61.140 | 386 | 109 | 7 | 3 | 348 | 4 | 388 | 1.98e-160 | 454 |
| MS.gene059797.t1 | MTR_3g463940 | 61.140 | 386 | 109 | 7 | 3 | 348 | 4 | 388 | 1.98e-160 | 454 |
| MS.gene059797.t1 | MTR_3g463930 | 59.796 | 393 | 110 | 8 | 3 | 348 | 4 | 395 | 1.38e-154 | 440 |
| MS.gene059797.t1 | MTR_2g043980 | 58.127 | 363 | 129 | 8 | 1 | 348 | 7 | 361 | 1.37e-137 | 395 |
| MS.gene059797.t1 | MTR_2g015650 | 48.518 | 371 | 160 | 7 | 6 | 348 | 7 | 374 | 9.96e-111 | 327 |
| MS.gene059797.t1 | MTR_2g015670 | 44.751 | 362 | 155 | 8 | 15 | 348 | 16 | 360 | 1.92e-95 | 288 |
| MS.gene059797.t1 | MTR_2g015630 | 44.023 | 343 | 155 | 9 | 35 | 345 | 36 | 373 | 5.77e-85 | 262 |
| MS.gene059797.t1 | MTR_2g043990 | 50.338 | 296 | 105 | 8 | 1 | 281 | 69 | 337 | 2.42e-83 | 256 |
| MS.gene059797.t1 | MTR_2g015580 | 40.870 | 345 | 169 | 9 | 27 | 341 | 44 | 383 | 2.47e-79 | 248 |
| MS.gene059797.t1 | MTR_2g015590 | 39.943 | 348 | 179 | 8 | 19 | 338 | 20 | 365 | 3.87e-75 | 236 |
| MS.gene059797.t1 | MTR_3g466240 | 52.113 | 213 | 64 | 5 | 90 | 295 | 2 | 183 | 2.76e-60 | 192 |
| MS.gene059797.t1 | MTR_4g104240 | 32.796 | 372 | 207 | 11 | 1 | 338 | 5 | 367 | 7.30e-57 | 189 |
| MS.gene059797.t1 | MTR_2g015590 | 38.790 | 281 | 154 | 6 | 19 | 282 | 20 | 299 | 6.51e-53 | 178 |
| MS.gene059797.t1 | MTR_8g028160 | 30.423 | 378 | 206 | 15 | 5 | 338 | 10 | 374 | 8.02e-41 | 147 |
| MS.gene059797.t1 | MTR_3g466190 | 52.121 | 165 | 48 | 7 | 57 | 210 | 7 | 151 | 6.72e-40 | 140 |
| MS.gene059797.t1 | MTR_3g466190 | 57.692 | 78 | 23 | 1 | 281 | 348 | 152 | 229 | 8.59e-21 | 90.1 |
| MS.gene059797.t1 | MTR_1g030268 | 32.113 | 355 | 185 | 13 | 28 | 341 | 38 | 377 | 1.81e-39 | 144 |
| MS.gene059797.t1 | MTR_7g087190 | 29.058 | 382 | 213 | 16 | 5 | 340 | 16 | 385 | 3.78e-39 | 143 |
| MS.gene059797.t1 | MTR_1g030220 | 29.630 | 378 | 209 | 14 | 7 | 341 | 16 | 379 | 9.20e-38 | 139 |
| MS.gene059797.t1 | MTR_8g089805 | 29.945 | 364 | 200 | 13 | 20 | 340 | 30 | 381 | 1.91e-37 | 139 |
| MS.gene059797.t1 | MTR_1g030340 | 29.275 | 386 | 202 | 15 | 4 | 340 | 18 | 381 | 2.36e-37 | 138 |
| MS.gene059797.t1 | MTR_7g116870 | 31.143 | 350 | 189 | 12 | 28 | 338 | 31 | 367 | 4.26e-37 | 137 |
| MS.gene059797.t1 | MTR_1g030275 | 31.356 | 354 | 187 | 13 | 28 | 340 | 37 | 375 | 6.92e-36 | 134 |
| MS.gene059797.t1 | MTR_7g033165 | 28.736 | 348 | 207 | 8 | 27 | 339 | 30 | 371 | 3.37e-35 | 132 |
| MS.gene059797.t1 | MTR_7g113860 | 28.198 | 383 | 210 | 12 | 2 | 338 | 9 | 372 | 5.27e-35 | 132 |
| MS.gene059797.t1 | MTR_6g007090 | 29.539 | 369 | 224 | 12 | 1 | 338 | 7 | 370 | 1.06e-34 | 131 |
| MS.gene059797.t1 | MTR_1g082390 | 28.809 | 361 | 209 | 10 | 19 | 341 | 20 | 370 | 1.54e-34 | 130 |
| MS.gene059797.t1 | MTR_1g030265 | 30.333 | 300 | 171 | 9 | 69 | 340 | 54 | 343 | 3.32e-32 | 124 |
| MS.gene059797.t1 | MTR_7g113860 | 28.691 | 359 | 193 | 11 | 26 | 338 | 25 | 366 | 3.47e-32 | 124 |
| MS.gene059797.t1 | MTR_1g030230 | 29.477 | 363 | 200 | 14 | 20 | 340 | 22 | 370 | 7.64e-32 | 123 |
| MS.gene059797.t1 | MTR_7g033150 | 28.238 | 386 | 214 | 15 | 4 | 340 | 7 | 378 | 6.84e-31 | 120 |
| MS.gene059797.t1 | MTR_6g007095 | 28.191 | 376 | 222 | 13 | 1 | 338 | 7 | 372 | 1.14e-30 | 123 |
| MS.gene059797.t1 | MTR_6g007095 | 26.354 | 277 | 194 | 6 | 69 | 340 | 419 | 690 | 3.55e-22 | 98.2 |
| MS.gene059797.t1 | MTR_7g033155 | 27.660 | 376 | 202 | 14 | 22 | 340 | 30 | 392 | 5.44e-30 | 118 |
| MS.gene059797.t1 | MTR_6g007100 | 28.011 | 357 | 228 | 11 | 1 | 338 | 7 | 353 | 1.33e-28 | 114 |
| MS.gene059797.t1 | MTR_7g111780 | 27.381 | 336 | 202 | 10 | 32 | 340 | 38 | 358 | 1.81e-28 | 114 |
| MS.gene059797.t1 | MTR_8g089805 | 28.763 | 299 | 172 | 11 | 73 | 340 | 25 | 313 | 2.65e-28 | 112 |
| MS.gene059797.t1 | MTR_8g038680 | 28.158 | 380 | 215 | 15 | 1 | 338 | 1 | 364 | 1.19e-26 | 108 |
| MS.gene059797.t1 | MTR_7g113860 | 26.974 | 304 | 172 | 9 | 69 | 338 | 11 | 298 | 7.21e-26 | 105 |
| MS.gene059797.t1 | MTR_1g030268 | 32.302 | 291 | 156 | 13 | 28 | 291 | 38 | 314 | 4.51e-25 | 103 |
| MS.gene059797.t1 | MTR_7g111780 | 27.985 | 268 | 158 | 9 | 91 | 340 | 9 | 259 | 5.34e-24 | 99.8 |
| MS.gene059797.t1 | MTR_7g033165 | 28.352 | 261 | 164 | 5 | 27 | 268 | 30 | 286 | 6.15e-23 | 97.8 |
| MS.gene059797.t1 | MTR_1g025780 | 28.060 | 335 | 188 | 14 | 30 | 332 | 41 | 354 | 3.22e-22 | 96.7 |
| MS.gene059797.t1 | MTR_5g022630 | 26.685 | 356 | 215 | 12 | 1 | 326 | 15 | 354 | 9.91e-22 | 95.1 |
| MS.gene059797.t1 | MTR_2g033930 | 28.012 | 332 | 195 | 12 | 30 | 333 | 32 | 347 | 1.67e-21 | 94.4 |
| MS.gene059797.t1 | MTR_8g022810 | 25.148 | 338 | 199 | 11 | 27 | 330 | 38 | 355 | 1.17e-20 | 92.4 |
| MS.gene059797.t1 | MTR_5g022640 | 26.722 | 363 | 217 | 13 | 1 | 332 | 15 | 359 | 1.59e-20 | 91.7 |
| MS.gene059797.t1 | MTR_8g031420 | 25.474 | 369 | 222 | 16 | 4 | 343 | 10 | 354 | 3.12e-20 | 90.9 |
| MS.gene059797.t1 | MTR_2g015080 | 28.313 | 332 | 184 | 15 | 30 | 323 | 38 | 353 | 4.29e-20 | 90.5 |
| MS.gene059797.t1 | MTR_3g005660 | 26.260 | 377 | 221 | 17 | 7 | 344 | 4 | 362 | 2.19e-19 | 88.6 |
| MS.gene059797.t1 | MTR_8g079050 | 26.486 | 370 | 215 | 14 | 2 | 333 | 10 | 360 | 3.87e-19 | 87.8 |
| MS.gene059797.t1 | MTR_8g031390 | 25.072 | 347 | 209 | 14 | 25 | 343 | 32 | 355 | 1.65e-18 | 85.9 |
| MS.gene059797.t1 | MTR_4g056280 | 26.531 | 343 | 202 | 13 | 20 | 331 | 21 | 344 | 2.34e-18 | 85.5 |
| MS.gene059797.t1 | MTR_1g025760 | 26.316 | 361 | 217 | 13 | 3 | 332 | 53 | 395 | 1.47e-17 | 83.6 |
| MS.gene059797.t1 | MTR_1g025680 | 27.893 | 337 | 196 | 13 | 26 | 332 | 30 | 349 | 1.99e-17 | 83.6 |
| MS.gene059797.t1 | MTR_1g025720 | 27.463 | 335 | 187 | 15 | 27 | 327 | 34 | 346 | 2.27e-17 | 82.4 |
| MS.gene059797.t1 | MTR_4g056160 | 25.301 | 332 | 204 | 10 | 30 | 331 | 27 | 344 | 2.90e-17 | 82.0 |
| MS.gene059797.t1 | MTR_2g100620 | 25.150 | 334 | 200 | 14 | 30 | 331 | 31 | 346 | 2.98e-17 | 82.0 |
| MS.gene059797.t1 | MTR_1g025700 | 27.049 | 366 | 214 | 16 | 2 | 332 | 17 | 364 | 2.98e-17 | 82.4 |
| MS.gene059797.t1 | MTR_3g464730 | 25.474 | 369 | 210 | 15 | 1 | 332 | 4 | 344 | 1.53e-16 | 80.1 |
| MS.gene059797.t1 | MTR_5g009100 | 24.925 | 333 | 201 | 13 | 32 | 333 | 48 | 362 | 2.15e-16 | 79.7 |
| MS.gene059797.t1 | MTR_2g033920 | 27.515 | 338 | 193 | 13 | 29 | 333 | 34 | 352 | 2.58e-16 | 79.7 |
| MS.gene059797.t1 | MTR_8g014910 | 24.859 | 354 | 208 | 15 | 11 | 331 | 19 | 347 | 3.30e-16 | 79.0 |
| MS.gene059797.t1 | MTR_7g008060 | 22.989 | 348 | 232 | 11 | 4 | 333 | 7 | 336 | 6.44e-16 | 78.2 |
| MS.gene059797.t1 | MTR_5g087690 | 23.729 | 354 | 221 | 10 | 18 | 343 | 37 | 369 | 6.80e-16 | 78.6 |
| MS.gene059797.t1 | MTR_3g052490 | 25.676 | 370 | 207 | 16 | 3 | 334 | 12 | 351 | 9.41e-16 | 77.8 |
| MS.gene059797.t1 | MTR_3g098270 | 25.215 | 349 | 210 | 13 | 28 | 344 | 32 | 361 | 4.37e-15 | 75.9 |
| MS.gene059797.t1 | MTR_3g082830 | 25.513 | 341 | 201 | 13 | 30 | 337 | 38 | 358 | 6.89e-15 | 75.1 |
| MS.gene059797.t1 | MTR_8g075200 | 25.816 | 337 | 201 | 10 | 27 | 332 | 38 | 356 | 3.04e-14 | 73.6 |
| MS.gene059797.t1 | MTR_8g012540 | 27.044 | 318 | 195 | 12 | 1 | 294 | 1 | 305 | 3.91e-14 | 72.8 |
| MS.gene059797.t1 | MTR_8g031400 | 26.613 | 372 | 216 | 18 | 4 | 343 | 10 | 356 | 5.94e-14 | 72.4 |
| MS.gene059797.t1 | MTR_8g075230 | 25.143 | 350 | 213 | 12 | 16 | 332 | 18 | 351 | 6.51e-14 | 72.4 |
| MS.gene059797.t1 | MTR_5g084790 | 25.449 | 334 | 200 | 13 | 30 | 332 | 32 | 347 | 2.02e-13 | 70.9 |
| MS.gene059797.t1 | MTR_3g052580 | 25.474 | 369 | 207 | 16 | 3 | 334 | 8 | 345 | 2.58e-13 | 70.9 |
| MS.gene059797.t1 | MTR_8g087890 | 23.955 | 359 | 218 | 17 | 1 | 328 | 7 | 341 | 2.78e-13 | 70.5 |
| MS.gene059797.t1 | MTR_3g052580 | 25.474 | 369 | 207 | 16 | 3 | 334 | 9 | 346 | 2.96e-13 | 70.5 |
| MS.gene059797.t1 | MTR_3g114090 | 26.549 | 339 | 198 | 14 | 26 | 332 | 32 | 351 | 4.19e-13 | 70.1 |
| MS.gene059797.t1 | MTR_8g075220 | 24.129 | 373 | 229 | 11 | 1 | 332 | 1 | 360 | 5.17e-13 | 69.7 |
| MS.gene059797.t1 | MTR_3g435540 | 25.749 | 334 | 195 | 14 | 32 | 332 | 25 | 338 | 6.19e-13 | 69.3 |
| MS.gene059797.t1 | MTR_7g116570 | 23.035 | 369 | 232 | 14 | 4 | 338 | 7 | 357 | 6.61e-13 | 69.3 |
| MS.gene059797.t1 | MTR_3g052480 | 25.895 | 363 | 206 | 17 | 8 | 334 | 18 | 353 | 6.92e-13 | 69.3 |
| MS.gene059797.t1 | MTR_5g084770 | 24.242 | 363 | 220 | 13 | 2 | 331 | 3 | 343 | 7.77e-13 | 68.9 |
| MS.gene059797.t1 | MTR_5g078210 | 25.634 | 355 | 200 | 16 | 1 | 328 | 1 | 318 | 8.17e-13 | 68.9 |
| MS.gene059797.t1 | MTR_1g025910 | 25.776 | 322 | 186 | 14 | 35 | 324 | 41 | 341 | 2.76e-12 | 67.4 |
| MS.gene059797.t1 | MTR_6g021530 | 23.837 | 344 | 210 | 13 | 29 | 338 | 28 | 353 | 2.85e-12 | 67.4 |
| MS.gene059797.t1 | MTR_8g022790 | 24.096 | 332 | 211 | 13 | 25 | 333 | 32 | 345 | 3.22e-12 | 67.4 |
| MS.gene059797.t1 | MTR_5g074270 | 25.072 | 347 | 203 | 13 | 20 | 328 | 19 | 346 | 3.36e-12 | 67.4 |
| MS.gene059797.t1 | MTR_0565s0010 | 22.561 | 328 | 207 | 14 | 31 | 328 | 33 | 343 | 4.61e-12 | 67.0 |
| MS.gene059797.t1 | MTR_5g093090 | 24.661 | 369 | 206 | 16 | 4 | 333 | 11 | 346 | 5.17e-12 | 66.6 |
| MS.gene059797.t1 | MTR_3g024510 | 23.077 | 325 | 208 | 12 | 31 | 328 | 39 | 348 | 5.76e-12 | 66.6 |
| MS.gene059797.t1 | MTR_4g108690 | 25.672 | 335 | 194 | 15 | 32 | 332 | 29 | 342 | 6.32e-12 | 66.6 |
| MS.gene059797.t1 | MTR_0009s0250 | 25.507 | 345 | 190 | 16 | 30 | 339 | 33 | 345 | 9.81e-12 | 65.9 |
| MS.gene059797.t1 | MTR_1108s0010 | 31.544 | 149 | 86 | 3 | 196 | 336 | 68 | 208 | 2.89e-11 | 62.8 |
| MS.gene059797.t1 | MTR_2g084585 | 24.444 | 360 | 224 | 14 | 2 | 331 | 3 | 344 | 8.50e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059797.t1 | AT5G45910 | 41.979 | 374 | 178 | 11 | 1 | 339 | 1 | 370 | 3.16e-88 | 270 |
| MS.gene059797.t1 | AT1G28610 | 41.076 | 353 | 177 | 7 | 15 | 339 | 16 | 365 | 7.04e-80 | 249 |
| MS.gene059797.t1 | AT1G28600 | 39.344 | 366 | 180 | 11 | 3 | 338 | 11 | 364 | 3.21e-75 | 237 |
| MS.gene059797.t1 | AT1G28590 | 39.045 | 356 | 185 | 8 | 15 | 341 | 21 | 373 | 7.52e-75 | 236 |
| MS.gene059797.t1 | AT1G28570 | 37.500 | 360 | 195 | 7 | 7 | 338 | 11 | 368 | 1.35e-73 | 233 |
| MS.gene059797.t1 | AT2G27360 | 37.534 | 365 | 194 | 8 | 3 | 338 | 9 | 368 | 2.21e-71 | 228 |
| MS.gene059797.t1 | AT1G28580 | 37.017 | 362 | 196 | 8 | 6 | 338 | 13 | 371 | 4.98e-71 | 226 |
| MS.gene059797.t1 | AT1G31550 | 37.602 | 367 | 193 | 10 | 1 | 338 | 10 | 369 | 3.58e-69 | 222 |
| MS.gene059797.t1 | AT1G28650 | 36.494 | 348 | 191 | 6 | 21 | 340 | 28 | 373 | 1.43e-66 | 215 |
| MS.gene059797.t1 | AT1G28670 | 36.103 | 349 | 192 | 7 | 21 | 340 | 26 | 372 | 3.10e-66 | 214 |
| MS.gene059797.t1 | AT1G28660 | 36.390 | 349 | 190 | 8 | 21 | 340 | 26 | 371 | 4.44e-66 | 213 |
| MS.gene059797.t1 | AT1G28640 | 36.103 | 349 | 191 | 8 | 21 | 340 | 26 | 371 | 8.26e-66 | 213 |
| MS.gene059797.t1 | AT1G31550 | 36.785 | 367 | 193 | 10 | 1 | 338 | 10 | 366 | 1.38e-65 | 212 |
| MS.gene059797.t1 | AT1G28660 | 36.390 | 349 | 189 | 9 | 21 | 340 | 26 | 370 | 2.56e-65 | 211 |
| MS.gene059797.t1 | AT1G28580 | 38.869 | 283 | 157 | 6 | 69 | 338 | 11 | 290 | 4.34e-61 | 198 |
| MS.gene059797.t1 | AT5G03980 | 35.294 | 340 | 166 | 8 | 6 | 330 | 10 | 310 | 1.75e-59 | 194 |
| MS.gene059797.t1 | AT3G48460 | 32.011 | 353 | 194 | 10 | 28 | 346 | 36 | 376 | 2.77e-52 | 177 |
| MS.gene059797.t1 | AT1G28570 | 38.756 | 209 | 116 | 3 | 142 | 338 | 88 | 296 | 1.20e-44 | 155 |
| MS.gene059797.t1 | AT1G28570 | 38.725 | 204 | 113 | 3 | 147 | 338 | 2 | 205 | 5.76e-44 | 151 |
| MS.gene059797.t1 | AT1G54790 | 29.944 | 354 | 195 | 10 | 26 | 338 | 28 | 369 | 4.07e-38 | 140 |
| MS.gene059797.t1 | AT3G05180 | 28.940 | 349 | 197 | 10 | 28 | 336 | 34 | 371 | 5.39e-36 | 134 |
| MS.gene059797.t1 | AT1G54790 | 28.645 | 391 | 219 | 14 | 1 | 345 | 1 | 377 | 2.61e-34 | 130 |
| MS.gene059797.t1 | AT4G01130 | 30.986 | 355 | 187 | 14 | 28 | 338 | 32 | 372 | 3.07e-34 | 130 |
| MS.gene059797.t1 | AT1G56670 | 28.610 | 367 | 220 | 11 | 2 | 338 | 9 | 363 | 5.55e-34 | 129 |
| MS.gene059797.t1 | AT1G67830 | 28.169 | 355 | 202 | 12 | 21 | 333 | 21 | 364 | 1.99e-32 | 124 |
| MS.gene059797.t1 | AT5G14450 | 26.738 | 374 | 224 | 11 | 5 | 338 | 15 | 378 | 2.06e-32 | 125 |
| MS.gene059797.t1 | AT3G26430 | 28.691 | 359 | 195 | 12 | 28 | 340 | 29 | 372 | 7.76e-31 | 120 |
| MS.gene059797.t1 | AT1G28600 | 37.321 | 209 | 102 | 8 | 3 | 193 | 11 | 208 | 3.03e-30 | 115 |
| MS.gene059797.t1 | AT3G27950 | 27.568 | 370 | 222 | 10 | 5 | 340 | 7 | 364 | 2.01e-29 | 116 |
| MS.gene059797.t1 | AT1G54790 | 27.229 | 415 | 220 | 15 | 1 | 345 | 1 | 403 | 2.22e-29 | 117 |
| MS.gene059797.t1 | AT1G28610 | 37.000 | 200 | 108 | 4 | 15 | 198 | 16 | 213 | 1.17e-28 | 112 |
| MS.gene059797.t1 | AT3G62280 | 27.221 | 349 | 201 | 12 | 21 | 338 | 31 | 357 | 1.24e-28 | 114 |
| MS.gene059797.t1 | AT1G09390 | 26.374 | 364 | 225 | 11 | 4 | 338 | 11 | 360 | 5.09e-27 | 110 |
| MS.gene059797.t1 | AT4G01130 | 28.716 | 296 | 171 | 10 | 73 | 338 | 1 | 286 | 8.07e-25 | 102 |
| MS.gene059797.t1 | AT4G01130 | 31.541 | 279 | 155 | 11 | 28 | 282 | 32 | 298 | 8.13e-25 | 103 |
| MS.gene059797.t1 | AT1G56670 | 28.428 | 299 | 186 | 9 | 2 | 282 | 9 | 297 | 7.27e-23 | 97.4 |
| MS.gene059797.t1 | AT1G20120 | 27.114 | 343 | 198 | 13 | 27 | 335 | 75 | 399 | 2.83e-21 | 94.4 |
| MS.gene059797.t1 | AT1G75880 | 27.520 | 367 | 205 | 15 | 8 | 332 | 20 | 367 | 7.29e-21 | 92.8 |
| MS.gene059797.t1 | AT1G75880 | 27.446 | 368 | 205 | 16 | 8 | 332 | 20 | 368 | 3.29e-19 | 88.2 |
| MS.gene059797.t1 | AT1G75890 | 25.556 | 360 | 221 | 14 | 4 | 332 | 20 | 363 | 6.42e-19 | 87.0 |
| MS.gene059797.t1 | AT1G75890 | 25.556 | 360 | 221 | 14 | 4 | 332 | 49 | 392 | 1.01e-18 | 87.0 |
| MS.gene059797.t1 | AT5G15720 | 26.364 | 330 | 194 | 14 | 30 | 327 | 30 | 342 | 3.21e-18 | 85.1 |
| MS.gene059797.t1 | AT5G45950 | 26.935 | 323 | 187 | 15 | 34 | 328 | 44 | 345 | 7.72e-18 | 84.0 |
| MS.gene059797.t1 | AT3G14820 | 27.164 | 335 | 187 | 14 | 30 | 331 | 32 | 342 | 7.91e-18 | 84.0 |
| MS.gene059797.t1 | AT4G10950 | 24.924 | 329 | 206 | 14 | 30 | 333 | 71 | 383 | 8.27e-18 | 84.3 |
| MS.gene059797.t1 | AT1G20132 | 26.549 | 339 | 200 | 12 | 30 | 337 | 61 | 381 | 1.37e-17 | 83.6 |
| MS.gene059797.t1 | AT4G10950 | 24.024 | 333 | 208 | 13 | 30 | 333 | 71 | 387 | 3.04e-17 | 82.8 |
| MS.gene059797.t1 | AT2G42990 | 26.801 | 347 | 202 | 14 | 13 | 327 | 12 | 338 | 5.49e-17 | 81.3 |
| MS.gene059797.t1 | AT3G62280 | 26.335 | 281 | 168 | 10 | 21 | 282 | 31 | 291 | 6.37e-17 | 80.5 |
| MS.gene059797.t1 | AT1G53990 | 24.390 | 369 | 230 | 14 | 3 | 343 | 8 | 355 | 1.48e-16 | 80.5 |
| MS.gene059797.t1 | AT1G71691 | 26.409 | 337 | 191 | 12 | 30 | 333 | 55 | 367 | 1.95e-16 | 80.1 |
| MS.gene059797.t1 | AT3G53100 | 24.625 | 333 | 202 | 14 | 30 | 331 | 29 | 343 | 1.99e-16 | 79.7 |
| MS.gene059797.t1 | AT2G40250 | 26.608 | 342 | 199 | 15 | 21 | 327 | 26 | 350 | 2.13e-16 | 79.7 |
| MS.gene059797.t1 | AT5G63170 | 25.633 | 316 | 192 | 11 | 30 | 323 | 28 | 322 | 3.82e-16 | 79.0 |
| MS.gene059797.t1 | AT1G71250 | 24.405 | 336 | 211 | 12 | 30 | 337 | 41 | 361 | 4.02e-16 | 79.0 |
| MS.gene059797.t1 | AT1G71120 | 24.556 | 338 | 195 | 11 | 30 | 333 | 31 | 342 | 7.04e-16 | 78.2 |
| MS.gene059797.t1 | AT1G20135 | 24.299 | 321 | 202 | 11 | 27 | 326 | 26 | 326 | 9.13e-16 | 77.4 |
| MS.gene059797.t1 | AT1G75920 | 26.923 | 364 | 198 | 17 | 1 | 332 | 9 | 336 | 1.12e-15 | 77.4 |
| MS.gene059797.t1 | AT1G75910 | 25.485 | 361 | 206 | 12 | 5 | 332 | 6 | 336 | 1.88e-15 | 77.0 |
| MS.gene059797.t1 | AT1G74460 | 24.100 | 361 | 215 | 13 | 3 | 332 | 6 | 338 | 4.80e-15 | 75.9 |
| MS.gene059797.t1 | AT3G50400 | 27.273 | 374 | 204 | 17 | 3 | 333 | 10 | 358 | 9.56e-15 | 75.1 |
| MS.gene059797.t1 | AT1G29670 | 24.695 | 328 | 198 | 13 | 31 | 328 | 33 | 341 | 1.22e-14 | 74.7 |
| MS.gene059797.t1 | AT1G75900 | 24.324 | 333 | 202 | 13 | 30 | 331 | 43 | 356 | 1.55e-14 | 74.3 |
| MS.gene059797.t1 | AT1G29670 | 25.000 | 328 | 197 | 13 | 31 | 328 | 101 | 409 | 1.95e-14 | 74.3 |
| MS.gene059797.t1 | AT5G15720 | 26.259 | 278 | 164 | 13 | 72 | 327 | 53 | 311 | 3.27e-14 | 73.2 |
| MS.gene059797.t1 | AT1G59406 | 25.208 | 361 | 222 | 12 | 1 | 332 | 1 | 342 | 5.11e-14 | 72.8 |
| MS.gene059797.t1 | AT1G59030 | 25.208 | 361 | 222 | 12 | 1 | 332 | 1 | 342 | 5.11e-14 | 72.8 |
| MS.gene059797.t1 | AT1G58725 | 25.208 | 361 | 222 | 12 | 1 | 332 | 1 | 342 | 5.11e-14 | 72.8 |
| MS.gene059797.t1 | AT2G23540 | 25.291 | 344 | 197 | 13 | 30 | 333 | 48 | 371 | 7.47e-14 | 72.4 |
| MS.gene059797.t1 | AT1G75920 | 25.858 | 379 | 198 | 17 | 1 | 332 | 4 | 346 | 9.16e-14 | 72.0 |
| MS.gene059797.t1 | AT3G04290 | 23.952 | 334 | 209 | 12 | 29 | 333 | 28 | 345 | 1.69e-13 | 71.2 |
| MS.gene059797.t1 | AT1G20130 | 25.656 | 343 | 195 | 14 | 30 | 332 | 204 | 526 | 1.77e-13 | 71.6 |
| MS.gene059797.t1 | AT5G08460 | 26.727 | 333 | 195 | 16 | 28 | 327 | 47 | 363 | 3.03e-13 | 70.5 |
| MS.gene059797.t1 | AT2G31540 | 25.397 | 378 | 205 | 14 | 7 | 336 | 11 | 359 | 3.03e-13 | 70.5 |
| MS.gene059797.t1 | AT1G71691 | 25.965 | 285 | 167 | 10 | 69 | 333 | 6 | 266 | 3.14e-13 | 69.7 |
| MS.gene059797.t1 | AT5G15720 | 26.335 | 281 | 161 | 13 | 30 | 282 | 30 | 292 | 3.65e-13 | 69.7 |
| MS.gene059797.t1 | AT1G20130 | 25.656 | 343 | 195 | 14 | 30 | 332 | 184 | 506 | 3.83e-13 | 70.9 |
| MS.gene059797.t1 | AT1G58520 | 25.588 | 340 | 206 | 11 | 18 | 332 | 18 | 335 | 4.47e-13 | 69.7 |
| MS.gene059797.t1 | AT1G58525 | 25.588 | 340 | 206 | 11 | 18 | 332 | 18 | 335 | 4.47e-13 | 69.7 |
| MS.gene059797.t1 | AT2G30310 | 25.405 | 370 | 200 | 14 | 3 | 327 | 8 | 346 | 6.03e-13 | 69.7 |
| MS.gene059797.t1 | AT1G75930 | 25.455 | 330 | 201 | 13 | 27 | 331 | 26 | 335 | 6.64e-13 | 69.3 |
| MS.gene059797.t1 | AT2G30220 | 25.620 | 363 | 207 | 13 | 5 | 327 | 6 | 345 | 8.37e-13 | 68.9 |
| MS.gene059797.t1 | AT5G55050 | 26.616 | 263 | 159 | 13 | 79 | 326 | 110 | 353 | 8.78e-13 | 69.3 |
| MS.gene059797.t1 | AT3G14225 | 24.857 | 350 | 209 | 14 | 30 | 343 | 37 | 368 | 1.52e-12 | 68.6 |
| MS.gene059797.t1 | AT3G16370 | 23.167 | 341 | 208 | 12 | 30 | 336 | 30 | 350 | 1.77e-12 | 68.2 |
| MS.gene059797.t1 | AT5G41890 | 25.479 | 365 | 213 | 14 | 11 | 333 | 12 | 359 | 2.15e-12 | 67.8 |
| MS.gene059797.t1 | AT2G04570 | 23.964 | 338 | 206 | 13 | 30 | 335 | 28 | 346 | 1.17e-11 | 65.5 |
| MS.gene059797.t1 | AT1G33811 | 24.638 | 345 | 218 | 14 | 14 | 328 | 18 | 350 | 1.86e-11 | 65.1 |
| MS.gene059797.t1 | AT1G54020 | 25.770 | 357 | 206 | 19 | 15 | 344 | 17 | 341 | 2.25e-11 | 64.7 |
| MS.gene059797.t1 | AT1G58430 | 24.791 | 359 | 221 | 11 | 4 | 330 | 9 | 350 | 5.48e-11 | 63.5 |
| MS.gene059797.t1 | AT1G53920 | 23.836 | 365 | 225 | 15 | 9 | 340 | 27 | 371 | 7.00e-11 | 63.5 |
| MS.gene059797.t1 | AT1G75920 | 27.481 | 262 | 147 | 11 | 87 | 332 | 74 | 308 | 7.22e-11 | 62.8 |
| MS.gene059797.t1 | AT5G03810 | 23.529 | 340 | 198 | 14 | 30 | 331 | 30 | 345 | 9.28e-11 | 62.8 |
Find 63 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAGAAATAGTTCCCTTTA+TGG | 0.130841 | 2.4:+19103611 | MS.gene059797:CDS |
| ATCCTTCAAAACGTATAAAT+TGG | 0.154270 | 2.4:+19104262 | MS.gene059797:CDS |
| AAAGAAGACTATGATGAATT+TGG | 0.177918 | 2.4:+19103880 | MS.gene059797:CDS |
| GTCTTTGCTTTCATTCTTAA+AGG | 0.198948 | 2.4:-19103219 | None:intergenic |
| AATTTAGTCGAGTACTTTAA+TGG | 0.225097 | 2.4:+19103922 | MS.gene059797:CDS |
| CTCAATGAGTTATTTGTATC+TGG | 0.254916 | 2.4:-19103329 | None:intergenic |
| TTAAGAGAAGGATTTGAAAA+TGG | 0.264149 | 2.4:-19104345 | None:intergenic |
| TATGAAGCTTTCTTTAACTT+TGG | 0.264191 | 2.4:+19102772 | MS.gene059797:CDS |
| TTGTTTATAGTTGGAGAAAT+TGG | 0.283387 | 2.4:+19103540 | MS.gene059797:CDS |
| ATGCCTAACCCTATTCCTTA+TGG | 0.311052 | 2.4:+19102841 | MS.gene059797:CDS |
| AGTAATGGCTTCAACCATAA+AGG | 0.331538 | 2.4:-19103625 | None:intergenic |
| TAAGTAGAACCATAAGGAAT+AGG | 0.340666 | 2.4:-19102850 | None:intergenic |
| AAGAAATCATTGTTTATAGT+TGG | 0.348062 | 2.4:+19103531 | MS.gene059797:CDS |
| TCAATTGTAGCCGAGGCATA+TGG | 0.349088 | 2.4:+19103179 | MS.gene059797:intron |
| GAAGAGAGTGAATATATTCA+TGG | 0.366592 | 2.4:-19102689 | None:intergenic |
| TATCAAACACCACAACAATA+TGG | 0.370274 | 2.4:+19104036 | MS.gene059797:CDS |
| AAGTATATTATCTTAACTTC+AGG | 0.374656 | 2.4:-19103985 | None:intergenic |
| TTTCCGATGGGGTGCAGTGC+TGG | 0.375763 | 2.4:+19103829 | MS.gene059797:CDS |
| ATTTAGTCGAGTACTTTAAT+GGG | 0.379933 | 2.4:+19103923 | MS.gene059797:CDS |
| AAGAAGACTATGATGAATTT+GGG | 0.390648 | 2.4:+19103881 | MS.gene059797:CDS |
| ACTTACTTTAAACATCCTTC+AGG | 0.400463 | 2.4:+19102868 | MS.gene059797:CDS |
| TGCAATAAAACATACATTTG+TGG | 0.419456 | 2.4:-19103652 | None:intergenic |
| GCTGTAGAGCTAGTGGTGCC+TGG | 0.423142 | 2.4:+19103802 | MS.gene059797:CDS |
| CATTGAGCATTCAACTTGGA+TGG | 0.434862 | 2.4:+19103345 | MS.gene059797:CDS |
| GCTTATAAGCTAATAGCAAA+AGG | 0.438238 | 2.4:+19104309 | MS.gene059797:CDS |
| TACATTTGTGGTGTTAGTAA+TGG | 0.442995 | 2.4:-19103640 | None:intergenic |
| AAGTAGAACCATAAGGAATA+GGG | 0.452342 | 2.4:-19102849 | None:intergenic |
| CAATTGTAGCCGAGGCATAT+GGG | 0.454691 | 2.4:+19103180 | MS.gene059797:intron |
| TCCTTCAAAACGTATAAATT+GGG | 0.456516 | 2.4:+19104263 | MS.gene059797:CDS |
| AAAAGAGGGGATTTAAGAGA+AGG | 0.458433 | 2.4:-19104357 | None:intergenic |
| GTAATGGCTTCAACCATAAA+GGG | 0.480246 | 2.4:-19103624 | None:intergenic |
| TTGCTTTCATTCTTAAAGGC+AGG | 0.481404 | 2.4:-19103215 | None:intergenic |
| GAACCATAAGGAATAGGGTT+AGG | 0.482948 | 2.4:-19102844 | None:intergenic |
| TTCTTCATCACCTTCACATG+TGG | 0.489386 | 2.4:+19102709 | MS.gene059797:CDS |
| GAGTTATTTGTATCTGGAAG+AGG | 0.491124 | 2.4:-19103323 | None:intergenic |
| TGGTGTTTGATATAAACGTT+TGG | 0.492868 | 2.4:-19104025 | None:intergenic |
| AACTCATTGAGCATTCAACT+TGG | 0.498581 | 2.4:+19103341 | MS.gene059797:CDS |
| GGAAATGCTGCGTTTGTCTA+CGG | 0.500564 | 2.4:+19102814 | MS.gene059797:CDS |
| CTCCTCTGTAAAAGCAAAGA+AGG | 0.500581 | 2.4:+19103389 | MS.gene059797:CDS |
| AGTATATTATCTTAACTTCA+GGG | 0.506555 | 2.4:-19103984 | None:intergenic |
| AAAGTATGTTGTGGAGGATG+TGG | 0.512867 | 2.4:+19104213 | MS.gene059797:CDS |
| CTTATAAGCTAATAGCAAAA+GGG | 0.513103 | 2.4:+19104310 | MS.gene059797:CDS |
| TTTATAGTTGGAGAAATTGG+TGG | 0.517613 | 2.4:+19103543 | MS.gene059797:CDS |
| CTGTAGAGCTAGTGGTGCCT+GGG | 0.525536 | 2.4:+19103803 | MS.gene059797:CDS |
| ATAGCAAAAGGGCTAGTTGA+GGG | 0.540275 | 2.4:+19104321 | MS.gene059797:CDS |
| TTAAAGTAAGTAGAACCATA+AGG | 0.541599 | 2.4:-19102856 | None:intergenic |
| TGCTAGGTGCTAATCGAAGA+AGG | 0.549087 | 2.4:+19103778 | MS.gene059797:intron |
| TTGTAGAAAACCACATGTGA+AGG | 0.567522 | 2.4:-19102719 | None:intergenic |
| TTATAGTTGGAGAAATTGGT+GGG | 0.571013 | 2.4:+19103544 | MS.gene059797:CDS |
| GGTGATTCAATAAGTGACAC+TGG | 0.575857 | 2.4:+19102793 | MS.gene059797:CDS |
| AGAAGGAGCTGTAGAGCTAG+TGG | 0.584696 | 2.4:+19103795 | MS.gene059797:CDS |
| CACCCCATCGGAAAATTCCC+AGG | 0.584888 | 2.4:-19103820 | None:intergenic |
| AAAAGGCAACCCATATGCCT+CGG | 0.587551 | 2.4:-19103189 | None:intergenic |
| CCATTTGACATACGTCCTGA+AGG | 0.596686 | 2.4:-19102883 | None:intergenic |
| AAGAAAGCTTCATATGAGAG+AGG | 0.610367 | 2.4:-19102763 | None:intergenic |
| GTTCCAGCACTGCACCCCAT+CGG | 0.622939 | 2.4:-19103832 | None:intergenic |
| TACCGCTCACCATATTGTTG+TGG | 0.624718 | 2.4:-19104045 | None:intergenic |
| TAAGGAATAGGGTTAGGCAT+AGG | 0.635829 | 2.4:-19102838 | None:intergenic |
| TCAAAACGTATAAATTGGGA+CGG | 0.645170 | 2.4:+19104267 | MS.gene059797:CDS |
| AATAGCAAAAGGGCTAGTTG+AGG | 0.650233 | 2.4:+19104320 | MS.gene059797:CDS |
| TAAGCTGCTTCAGTAAAGTG+AGG | 0.670311 | 2.4:-19104291 | None:intergenic |
| CAGTGCTGGAACATTGACAT+CGG | 0.723676 | 2.4:+19103843 | MS.gene059797:CDS |
| ATACTCAACATTGAGTACAG+TGG | 0.728519 | 2.4:-19103282 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATATAATTATATATTT+TGG | + | chr2.4:19104069-19104088 | MS.gene059797:intron | 0.0% |
| !! | AAATAAATAATAATGTAATG+AGG | + | chr2.4:19103057-19103076 | MS.gene059797:intron | 10.0% |
| !! | TAAATCTAAATATCAAGTTA+AGG | - | chr2.4:19103037-19103056 | None:intergenic | 15.0% |
| !!! | CATGAATTTTTTTTTCAATA+TGG | + | chr2.4:19103462-19103481 | MS.gene059797:intron | 15.0% |
| !!! | TAAAAATCTATTTTCTTTTG+TGG | + | chr2.4:19103096-19103115 | MS.gene059797:intron | 15.0% |
| !! | AAGAAATCATTGTTTATAGT+TGG | + | chr2.4:19103531-19103550 | MS.gene059797:CDS | 20.0% |
| !! | AAGTATATTATCTTAACTTC+AGG | - | chr2.4:19103988-19104007 | None:intergenic | 20.0% |
| !! | AGTATATTATCTTAACTTCA+GGG | - | chr2.4:19103987-19104006 | None:intergenic | 20.0% |
| !! | ATCAATCAAATTAATTATGC+AGG | + | chr2.4:19104168-19104187 | MS.gene059797:intron | 20.0% |
| !! | CATGCATAAATGAAATAAAA+AGG | - | chr2.4:19104140-19104159 | None:intergenic | 20.0% |
| !! | GAAATAAAAAGGAATAATTG+TGG | - | chr2.4:19104129-19104148 | None:intergenic | 20.0% |
| !! | TACATACAATCTACAAAATA+TGG | + | chr2.4:19103004-19103023 | MS.gene059797:intron | 20.0% |
| !! | TTGAGTATTATGTCAAAAAT+GGG | + | chr2.4:19103297-19103316 | MS.gene059797:CDS | 20.0% |
| !!! | GTTTTATTGCAATTAAGTTT+TGG | + | chr2.4:19103664-19103683 | MS.gene059797:intron | 20.0% |
| !!! | TTGTTTCTTATTCTTATCAT+TGG | - | chr2.4:19102973-19102992 | None:intergenic | 20.0% |
| ! | AAAAAAAATTCCACTGCTTA+TGG | - | chr2.4:19103420-19103439 | None:intergenic | 25.0% |
| ! | AAAGAAGACTATGATGAATT+TGG | + | chr2.4:19103880-19103899 | MS.gene059797:CDS | 25.0% |
| ! | AAAGACCATGATATCAAAAA+AGG | + | chr2.4:19103236-19103255 | MS.gene059797:CDS | 25.0% |
| ! | AAGAAGACTATGATGAATTT+GGG | + | chr2.4:19103881-19103900 | MS.gene059797:CDS | 25.0% |
| ! | AATTTAGTCGAGTACTTTAA+TGG | + | chr2.4:19103922-19103941 | MS.gene059797:CDS | 25.0% |
| ! | ATCCTTCAAAACGTATAAAT+TGG | + | chr2.4:19104262-19104281 | MS.gene059797:CDS | 25.0% |
| ! | ATTTAGTCGAGTACTTTAAT+GGG | + | chr2.4:19103923-19103942 | MS.gene059797:CDS | 25.0% |
| ! | CAAAGAGAAATATCATTGAT+TGG | + | chr2.4:19103713-19103732 | MS.gene059797:intron | 25.0% |
| ! | CTTATAAGCTAATAGCAAAA+GGG | + | chr2.4:19104310-19104329 | MS.gene059797:CDS | 25.0% |
| ! | GTTGAGTATTATGTCAAAAA+TGG | + | chr2.4:19103296-19103315 | MS.gene059797:CDS | 25.0% |
| ! | TCCTTCAAAACGTATAAATT+GGG | + | chr2.4:19104263-19104282 | MS.gene059797:CDS | 25.0% |
| ! | TGCAATAAAACATACATTTG+TGG | - | chr2.4:19103655-19103674 | None:intergenic | 25.0% |
| ! | TTAAAGTAAGTAGAACCATA+AGG | - | chr2.4:19102859-19102878 | None:intergenic | 25.0% |
| ! | TTAAGAGAAGGATTTGAAAA+TGG | - | chr2.4:19104348-19104367 | None:intergenic | 25.0% |
| ! | TTGTTTATAGTTGGAGAAAT+TGG | + | chr2.4:19103540-19103559 | MS.gene059797:CDS | 25.0% |
| !! | TATGAAGCTTTCTTTAACTT+TGG | + | chr2.4:19102772-19102791 | MS.gene059797:CDS | 25.0% |
| !!! | TAATTATGCAGGTTTTGATA+AGG | + | chr2.4:19104179-19104198 | MS.gene059797:intron | 25.0% |
| !!! | TTACTCCTTTTTTGATATCA+TGG | - | chr2.4:19103244-19103263 | None:intergenic | 25.0% |
| AAGTAGAACCATAAGGAATA+GGG | - | chr2.4:19102852-19102871 | None:intergenic | 30.0% | |
| ACTTACTTTAAACATCCTTC+AGG | + | chr2.4:19102868-19102887 | MS.gene059797:CDS | 30.0% | |
| CTCAATGAGTTATTTGTATC+TGG | - | chr2.4:19103332-19103351 | None:intergenic | 30.0% | |
| GCTTATAAGCTAATAGCAAA+AGG | + | chr2.4:19104309-19104328 | MS.gene059797:CDS | 30.0% | |
| GTCTTTGCTTTCATTCTTAA+AGG | - | chr2.4:19103222-19103241 | None:intergenic | 30.0% | |
| TAAGTAGAACCATAAGGAAT+AGG | - | chr2.4:19102853-19102872 | None:intergenic | 30.0% | |
| TATCAAACACCACAACAATA+TGG | + | chr2.4:19104036-19104055 | MS.gene059797:CDS | 30.0% | |
| TCAAAACGTATAAATTGGGA+CGG | + | chr2.4:19104267-19104286 | MS.gene059797:CDS | 30.0% | |
| TGGTGTTTGATATAAACGTT+TGG | - | chr2.4:19104028-19104047 | None:intergenic | 30.0% | |
| TTATAGTTGGAGAAATTGGT+GGG | + | chr2.4:19103544-19103563 | MS.gene059797:CDS | 30.0% | |
| TTTATAGTTGGAGAAATTGG+TGG | + | chr2.4:19103543-19103562 | MS.gene059797:CDS | 30.0% | |
| TTTCATTTATGCATGCTTAC+TGG | + | chr2.4:19104145-19104164 | MS.gene059797:intron | 30.0% | |
| ! | ATTTTCAAAGTATGTTGTGG+AGG | + | chr2.4:19104207-19104226 | MS.gene059797:CDS | 30.0% |
| ! | CGACTGATCATAGATTTTAT+TGG | + | chr2.4:19102907-19102926 | MS.gene059797:intron | 30.0% |
| ! | TACATTTGTGGTGTTAGTAA+TGG | - | chr2.4:19103643-19103662 | None:intergenic | 30.0% |
| ! | TCCCAATTTATACGTTTTGA+AGG | - | chr2.4:19104267-19104286 | None:intergenic | 30.0% |
| !! | CTAAGCTATTTTGAAAAGAG+GGG | - | chr2.4:19104373-19104392 | None:intergenic | 30.0% |
| !! | GCTATTTTCAAAGTATGTTG+TGG | + | chr2.4:19104204-19104223 | MS.gene059797:CDS | 30.0% |
| !!! | CAATGTCACATTTTTTCACA+CGG | - | chr2.4:19103744-19103763 | None:intergenic | 30.0% |
| !!! | TGATTTTGTTTCTATGTGCT+AGG | + | chr2.4:19103762-19103781 | MS.gene059797:intron | 30.0% |
| AAAAGAGGGGATTTAAGAGA+AGG | - | chr2.4:19104360-19104379 | None:intergenic | 35.0% | |
| AACTCATTGAGCATTCAACT+TGG | + | chr2.4:19103341-19103360 | MS.gene059797:CDS | 35.0% | |
| AAGAAAGCTTCATATGAGAG+AGG | - | chr2.4:19102766-19102785 | None:intergenic | 35.0% | |
| AGTAATGGCTTCAACCATAA+AGG | - | chr2.4:19103628-19103647 | None:intergenic | 35.0% | |
| ATACTCAACATTGAGTACAG+TGG | - | chr2.4:19103285-19103304 | None:intergenic | 35.0% | |
| GAGTTATTTGTATCTGGAAG+AGG | - | chr2.4:19103326-19103345 | None:intergenic | 35.0% | |
| GTAATGGCTTCAACCATAAA+GGG | - | chr2.4:19103627-19103646 | None:intergenic | 35.0% | |
| TCGAGAAATAGTTCCCTTTA+TGG | + | chr2.4:19103611-19103630 | MS.gene059797:CDS | 35.0% | |
| TTCTTAAAGGCAGGCAAAAA+AGG | - | chr2.4:19103209-19103228 | None:intergenic | 35.0% | |
| TTGCTTTCATTCTTAAAGGC+AGG | - | chr2.4:19103218-19103237 | None:intergenic | 35.0% | |
| TTGTAGAAAACCACATGTGA+AGG | - | chr2.4:19102722-19102741 | None:intergenic | 35.0% | |
| ! | GGAGTAAATTTTGCATTTGC+TGG | + | chr2.4:19103257-19103276 | MS.gene059797:CDS | 35.0% |
| !! | AACCTTCTTTGCTTTTACAG+AGG | - | chr2.4:19103394-19103413 | None:intergenic | 35.0% |
| !! | TTCTTTGCTTTTACAGAGGA+GGG | - | chr2.4:19103390-19103409 | None:intergenic | 35.0% |
| AAAGTATGTTGTGGAGGATG+TGG | + | chr2.4:19104213-19104232 | MS.gene059797:CDS | 40.0% | |
| ATGCCTAACCCTATTCCTTA+TGG | + | chr2.4:19102841-19102860 | MS.gene059797:CDS | 40.0% | |
| CATTGAGCATTCAACTTGGA+TGG | + | chr2.4:19103345-19103364 | MS.gene059797:CDS | 40.0% | |
| CTCCTCTGTAAAAGCAAAGA+AGG | + | chr2.4:19103389-19103408 | MS.gene059797:CDS | 40.0% | |
| GAACCATAAGGAATAGGGTT+AGG | - | chr2.4:19102847-19102866 | None:intergenic | 40.0% | |
| GATCATTTCAATTGTAGCCG+AGG | + | chr2.4:19103172-19103191 | MS.gene059797:intron | 40.0% | |
| GGTGATTCAATAAGTGACAC+TGG | + | chr2.4:19102793-19102812 | MS.gene059797:CDS | 40.0% | |
| TAAGCTGCTTCAGTAAAGTG+AGG | - | chr2.4:19104294-19104313 | None:intergenic | 40.0% | |
| TAAGGAATAGGGTTAGGCAT+AGG | - | chr2.4:19102841-19102860 | None:intergenic | 40.0% | |
| TTCTTCATCACCTTCACATG+TGG | + | chr2.4:19102709-19102728 | MS.gene059797:CDS | 40.0% | |
| ! | GAAGGTTTTACCATAAGCAG+TGG | + | chr2.4:19103407-19103426 | MS.gene059797:intron | 40.0% |
| !! | AATAGCAAAAGGGCTAGTTG+AGG | + | chr2.4:19104320-19104339 | MS.gene059797:CDS | 40.0% |
| !! | ATAGCAAAAGGGCTAGTTGA+GGG | + | chr2.4:19104321-19104340 | MS.gene059797:CDS | 40.0% |
| !! | CTTCTTTGCTTTTACAGAGG+AGG | - | chr2.4:19103391-19103410 | None:intergenic | 40.0% |
| !! | TCTTTGCTTTTACAGAGGAG+GGG | - | chr2.4:19103389-19103408 | None:intergenic | 40.0% |
| AAAAGGCAACCCATATGCCT+CGG | - | chr2.4:19103192-19103211 | None:intergenic | 45.0% | |
| CAATTGTAGCCGAGGCATAT+GGG | + | chr2.4:19103180-19103199 | MS.gene059797:intron | 45.0% | |
| CACCACAACAATATGGTGAG+CGG | + | chr2.4:19104043-19104062 | MS.gene059797:intron | 45.0% | |
| CCATTTGACATACGTCCTGA+AGG | - | chr2.4:19102886-19102905 | None:intergenic | 45.0% | |
| CCTTCAGGACGTATGTCAAA+TGG | + | chr2.4:19102883-19102902 | MS.gene059797:intron | 45.0% | |
| GGAAATGCTGCGTTTGTCTA+CGG | + | chr2.4:19102814-19102833 | MS.gene059797:CDS | 45.0% | |
| TACCGCTCACCATATTGTTG+TGG | - | chr2.4:19104048-19104067 | None:intergenic | 45.0% | |
| TCAATTGTAGCCGAGGCATA+TGG | + | chr2.4:19103179-19103198 | MS.gene059797:intron | 45.0% | |
| TGCTAGGTGCTAATCGAAGA+AGG | + | chr2.4:19103778-19103797 | MS.gene059797:intron | 45.0% | |
| ! | CAGTGCTGGAACATTGACAT+CGG | + | chr2.4:19103843-19103862 | MS.gene059797:CDS | 45.0% |
| AGAAGGAGCTGTAGAGCTAG+TGG | + | chr2.4:19103795-19103814 | MS.gene059797:CDS | 50.0% | |
| ! | GTGCCTGGGAATTTTCCGAT+GGG | + | chr2.4:19103817-19103836 | MS.gene059797:CDS | 50.0% |
| ! | TGCCTGGGAATTTTCCGATG+GGG | + | chr2.4:19103818-19103837 | MS.gene059797:CDS | 50.0% |
| CACCCCATCGGAAAATTCCC+AGG | - | chr2.4:19103823-19103842 | None:intergenic | 55.0% | |
| CTGTAGAGCTAGTGGTGCCT+GGG | + | chr2.4:19103803-19103822 | MS.gene059797:CDS | 55.0% | |
| ! | GGTGCCTGGGAATTTTCCGA+TGG | + | chr2.4:19103816-19103835 | MS.gene059797:CDS | 55.0% |
| GCTGTAGAGCTAGTGGTGCC+TGG | + | chr2.4:19103802-19103821 | MS.gene059797:CDS | 60.0% | |
| GTTCCAGCACTGCACCCCAT+CGG | - | chr2.4:19103835-19103854 | None:intergenic | 60.0% | |
| TTTCCGATGGGGTGCAGTGC+TGG | + | chr2.4:19103829-19103848 | MS.gene059797:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 19102691 | 19104392 | 19102691 | ID=MS.gene059797 |
| chr2.4 | mRNA | 19102691 | 19104392 | 19102691 | ID=MS.gene059797.t1;Parent=MS.gene059797 |
| chr2.4 | exon | 19102691 | 19102892 | 19102691 | ID=MS.gene059797.t1.exon1;Parent=MS.gene059797.t1 |
| chr2.4 | CDS | 19102691 | 19102892 | 19102691 | ID=cds.MS.gene059797.t1;Parent=MS.gene059797.t1 |
| chr2.4 | exon | 19103189 | 19103410 | 19103189 | ID=MS.gene059797.t1.exon2;Parent=MS.gene059797.t1 |
| chr2.4 | CDS | 19103189 | 19103410 | 19103189 | ID=cds.MS.gene059797.t1;Parent=MS.gene059797.t1 |
| chr2.4 | exon | 19103514 | 19103659 | 19103514 | ID=MS.gene059797.t1.exon3;Parent=MS.gene059797.t1 |
| chr2.4 | CDS | 19103514 | 19103659 | 19103514 | ID=cds.MS.gene059797.t1;Parent=MS.gene059797.t1 |
| chr2.4 | exon | 19103784 | 19104057 | 19103784 | ID=MS.gene059797.t1.exon4;Parent=MS.gene059797.t1 |
| chr2.4 | CDS | 19103784 | 19104057 | 19103784 | ID=cds.MS.gene059797.t1;Parent=MS.gene059797.t1 |
| chr2.4 | exon | 19104190 | 19104392 | 19104190 | ID=MS.gene059797.t1.exon5;Parent=MS.gene059797.t1 |
| chr2.4 | CDS | 19104190 | 19104392 | 19104190 | ID=cds.MS.gene059797.t1;Parent=MS.gene059797.t1 |
| Gene Sequence |
| Protein sequence |
