Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059972.t1 | XP_003608904.1 | 97.9 | 574 | 9 | 2 | 1 | 572 | 1 | 573 | 3.70E-197 | 698 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059972.t1 | Q9STM4 | 61.3 | 282 | 99 | 6 | 229 | 501 | 107 | 387 | 1.5e-53 | 212.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059972.t1 | G7JMP1 | 97.9 | 574 | 9 | 2 | 1 | 572 | 1 | 573 | 2.7e-197 | 698.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene059972.t1 | TF | C3H |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene059972 | MS.gene48289 | 0.961928 | 2.83E-120 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059972.t1 | MTR_4g104260 | 96.690 | 574 | 16 | 2 | 1 | 572 | 1 | 573 | 0.0 | 1141 |
MS.gene059972.t1 | MTR_3g075190 | 54.383 | 559 | 185 | 16 | 21 | 568 | 12 | 511 | 0.0 | 555 |
MS.gene059972.t1 | MTR_7g079840 | 37.701 | 374 | 186 | 12 | 229 | 571 | 17 | 374 | 1.56e-68 | 227 |
MS.gene059972.t1 | MTR_7g079840 | 37.701 | 374 | 186 | 12 | 229 | 571 | 27 | 384 | 1.78e-68 | 228 |
MS.gene059972.t1 | MTR_5g085200 | 38.272 | 324 | 164 | 13 | 229 | 536 | 44 | 347 | 9.23e-65 | 218 |
MS.gene059972.t1 | MTR_4g119280 | 36.193 | 373 | 157 | 14 | 229 | 532 | 43 | 403 | 1.32e-58 | 204 |
MS.gene059972.t1 | MTR_4g119280 | 40.777 | 103 | 53 | 1 | 457 | 559 | 88 | 182 | 9.58e-19 | 90.1 |
MS.gene059972.t1 | MTR_2g019740 | 34.097 | 349 | 179 | 11 | 229 | 536 | 44 | 382 | 8.36e-51 | 182 |
MS.gene059972.t1 | MTR_1g088875 | 33.750 | 320 | 165 | 13 | 222 | 508 | 39 | 344 | 4.48e-48 | 171 |
MS.gene059972.t1 | MTR_1g088875 | 41.880 | 117 | 65 | 1 | 457 | 570 | 91 | 207 | 1.05e-21 | 97.1 |
MS.gene059972.t1 | MTR_1g088875 | 33.540 | 322 | 167 | 13 | 222 | 510 | 39 | 346 | 1.29e-47 | 170 |
MS.gene059972.t1 | MTR_1g088875 | 41.880 | 117 | 65 | 1 | 457 | 570 | 91 | 207 | 9.42e-22 | 97.4 |
MS.gene059972.t1 | MTR_1g088875 | 33.542 | 319 | 165 | 13 | 222 | 507 | 39 | 343 | 2.93e-47 | 169 |
MS.gene059972.t1 | MTR_1g088875 | 41.880 | 117 | 65 | 1 | 457 | 570 | 91 | 207 | 9.43e-22 | 97.4 |
MS.gene059972.t1 | MTR_4g119280 | 34.770 | 348 | 146 | 14 | 229 | 507 | 43 | 378 | 8.14e-47 | 169 |
MS.gene059972.t1 | MTR_4g119280 | 40.777 | 103 | 53 | 1 | 457 | 559 | 88 | 182 | 4.19e-19 | 89.7 |
MS.gene059972.t1 | MTR_8g446930 | 30.904 | 343 | 140 | 10 | 229 | 532 | 40 | 324 | 4.04e-45 | 163 |
MS.gene059972.t1 | MTR_8g446930 | 35.714 | 168 | 65 | 4 | 229 | 353 | 159 | 326 | 3.17e-25 | 107 |
MS.gene059972.t1 | MTR_8g446930 | 43.617 | 94 | 48 | 1 | 440 | 533 | 23 | 111 | 6.42e-18 | 85.9 |
MS.gene059972.t1 | MTR_8g446930 | 30.641 | 359 | 152 | 10 | 213 | 532 | 174 | 474 | 1.26e-44 | 166 |
MS.gene059972.t1 | MTR_8g446930 | 35.714 | 168 | 65 | 4 | 229 | 353 | 309 | 476 | 1.12e-24 | 108 |
MS.gene059972.t1 | MTR_8g446930 | 48.780 | 82 | 37 | 1 | 452 | 533 | 185 | 261 | 1.63e-17 | 86.3 |
MS.gene059972.t1 | MTR_7g005460 | 76.316 | 38 | 9 | 0 | 90 | 127 | 48 | 85 | 4.73e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059972.t1 | AT3G48440 | 58.610 | 331 | 125 | 7 | 210 | 531 | 90 | 417 | 2.97e-134 | 399 |
MS.gene059972.t1 | AT3G48440 | 47.561 | 82 | 36 | 3 | 228 | 307 | 342 | 418 | 1.45e-14 | 76.6 |
MS.gene059972.t1 | AT3G48440 | 29.268 | 164 | 62 | 5 | 456 | 571 | 106 | 263 | 2.19e-12 | 69.7 |
MS.gene059972.t1 | AT5G63260 | 54.121 | 364 | 149 | 8 | 212 | 566 | 79 | 433 | 4.14e-124 | 372 |
MS.gene059972.t1 | AT5G63260 | 52.116 | 378 | 151 | 8 | 212 | 566 | 79 | 449 | 1.42e-122 | 369 |
MS.gene059972.t1 | AT3G02830 | 42.059 | 340 | 137 | 12 | 226 | 532 | 14 | 326 | 4.96e-72 | 236 |
MS.gene059972.t1 | AT3G02830 | 44.118 | 102 | 56 | 1 | 457 | 557 | 62 | 163 | 1.27e-21 | 97.4 |
MS.gene059972.t1 | AT3G02830 | 42.059 | 340 | 137 | 12 | 226 | 532 | 34 | 346 | 5.53e-72 | 236 |
MS.gene059972.t1 | AT3G02830 | 44.118 | 102 | 56 | 1 | 457 | 557 | 82 | 183 | 1.66e-21 | 97.4 |
MS.gene059972.t1 | AT5G16540 | 40.909 | 308 | 147 | 9 | 229 | 532 | 18 | 294 | 2.59e-66 | 220 |
MS.gene059972.t1 | AT5G16540 | 39.474 | 114 | 56 | 1 | 457 | 557 | 63 | 176 | 3.45e-19 | 89.7 |
MS.gene059972.t1 | AT5G16540 | 41.250 | 80 | 42 | 2 | 228 | 306 | 62 | 137 | 4.56e-12 | 68.2 |
MS.gene059972.t1 | AT5G16540 | 40.909 | 308 | 147 | 9 | 229 | 532 | 39 | 315 | 3.44e-66 | 220 |
MS.gene059972.t1 | AT5G16540 | 39.474 | 114 | 56 | 1 | 457 | 557 | 84 | 197 | 3.78e-19 | 90.1 |
MS.gene059972.t1 | AT5G16540 | 41.250 | 80 | 42 | 2 | 228 | 306 | 83 | 158 | 4.45e-12 | 68.6 |
MS.gene059972.t1 | AT3G06410 | 38.872 | 337 | 163 | 11 | 229 | 531 | 51 | 378 | 4.31e-64 | 217 |
MS.gene059972.t1 | AT3G06410 | 49.367 | 79 | 38 | 1 | 456 | 532 | 96 | 174 | 2.03e-17 | 85.5 |
MS.gene059972.t1 | AT3G06410 | 41.772 | 79 | 46 | 0 | 455 | 533 | 49 | 127 | 3.64e-15 | 78.6 |
MS.gene059972.t1 | AT3G06410 | 33.333 | 93 | 58 | 2 | 215 | 306 | 289 | 378 | 1.88e-11 | 67.0 |
MS.gene059972.t1 | AT2G47850 | 39.420 | 345 | 159 | 14 | 225 | 536 | 38 | 365 | 3.72e-63 | 215 |
MS.gene059972.t1 | AT2G47850 | 39.420 | 345 | 159 | 14 | 225 | 536 | 38 | 365 | 3.72e-63 | 215 |
MS.gene059972.t1 | AT5G18550 | 37.764 | 331 | 170 | 10 | 229 | 531 | 48 | 370 | 1.31e-62 | 213 |
MS.gene059972.t1 | AT5G18550 | 40.179 | 112 | 50 | 2 | 457 | 551 | 94 | 205 | 6.05e-18 | 87.4 |
MS.gene059972.t1 | AT5G18550 | 44.872 | 78 | 43 | 0 | 455 | 532 | 46 | 123 | 6.95e-17 | 84.0 |
MS.gene059972.t1 | AT5G18550 | 37.764 | 331 | 170 | 10 | 229 | 531 | 48 | 370 | 1.97e-62 | 213 |
MS.gene059972.t1 | AT5G18550 | 40.179 | 112 | 50 | 2 | 457 | 551 | 94 | 205 | 7.43e-18 | 87.0 |
MS.gene059972.t1 | AT5G18550 | 44.304 | 79 | 44 | 0 | 455 | 533 | 46 | 124 | 8.13e-17 | 83.6 |
MS.gene059972.t1 | AT5G18550 | 38.066 | 331 | 169 | 10 | 229 | 531 | 16 | 338 | 3.12e-62 | 211 |
MS.gene059972.t1 | AT5G18550 | 40.179 | 112 | 50 | 2 | 457 | 551 | 62 | 173 | 1.13e-17 | 86.3 |
MS.gene059972.t1 | AT5G18550 | 44.304 | 79 | 44 | 0 | 455 | 533 | 14 | 92 | 1.29e-16 | 82.8 |
MS.gene059972.t1 | AT5G16540 | 39.935 | 308 | 143 | 11 | 229 | 532 | 39 | 308 | 3.31e-59 | 201 |
MS.gene059972.t1 | AT5G16540 | 39.474 | 114 | 56 | 1 | 457 | 557 | 84 | 197 | 2.79e-19 | 90.5 |
MS.gene059972.t1 | AT5G16540 | 41.250 | 80 | 42 | 2 | 228 | 306 | 83 | 158 | 4.63e-12 | 68.2 |
MS.gene059972.t1 | AT1G04990 | 36.000 | 325 | 170 | 11 | 229 | 543 | 44 | 340 | 3.74e-59 | 202 |
MS.gene059972.t1 | AT1G04990 | 36.000 | 325 | 170 | 11 | 229 | 543 | 44 | 340 | 3.74e-59 | 202 |
MS.gene059972.t1 | AT1G04990 | 36.000 | 325 | 170 | 11 | 229 | 543 | 44 | 340 | 3.74e-59 | 202 |
MS.gene059972.t1 | AT5G18550 | 35.542 | 332 | 163 | 11 | 229 | 531 | 48 | 357 | 3.47e-56 | 196 |
MS.gene059972.t1 | AT5G18550 | 40.179 | 112 | 50 | 2 | 457 | 551 | 94 | 205 | 5.34e-18 | 87.4 |
MS.gene059972.t1 | AT5G18550 | 44.872 | 78 | 43 | 0 | 455 | 532 | 46 | 123 | 6.34e-17 | 84.0 |
MS.gene059972.t1 | AT2G32930 | 34.234 | 333 | 184 | 10 | 229 | 547 | 14 | 325 | 5.60e-54 | 189 |
MS.gene059972.t1 | AT2G32930 | 34.234 | 333 | 184 | 10 | 229 | 547 | 41 | 352 | 6.60e-54 | 190 |
MS.gene059972.t1 | AT5G16540 | 38.516 | 283 | 139 | 9 | 229 | 507 | 18 | 269 | 3.65e-51 | 177 |
MS.gene059972.t1 | AT5G16540 | 39.474 | 114 | 56 | 1 | 457 | 557 | 63 | 176 | 1.32e-19 | 89.4 |
MS.gene059972.t1 | AT5G16540 | 41.250 | 80 | 42 | 2 | 228 | 306 | 62 | 137 | 2.87e-12 | 67.8 |
MS.gene059972.t1 | AT1G04990 | 33.846 | 325 | 157 | 12 | 229 | 543 | 44 | 320 | 1.98e-50 | 178 |
MS.gene059972.t1 | AT2G32930 | 33.934 | 333 | 181 | 11 | 229 | 547 | 41 | 348 | 1.99e-50 | 180 |
MS.gene059972.t1 | AT2G47850 | 35.455 | 330 | 167 | 12 | 225 | 536 | 38 | 339 | 6.21e-47 | 171 |
MS.gene059972.t1 | AT3G12680 | 30.588 | 340 | 140 | 9 | 228 | 532 | 221 | 499 | 2.04e-44 | 165 |
MS.gene059972.t1 | AT3G12680 | 33.939 | 165 | 69 | 3 | 229 | 353 | 337 | 501 | 7.26e-24 | 105 |
MS.gene059972.t1 | AT3G12680 | 30.380 | 237 | 98 | 5 | 323 | 533 | 172 | 367 | 1.25e-22 | 102 |
MS.gene059972.t1 | AT3G12680 | 30.732 | 205 | 81 | 6 | 208 | 351 | 242 | 446 | 4.83e-22 | 100 |
MS.gene059972.t1 | AT1G04990 | 35.926 | 270 | 141 | 10 | 284 | 543 | 12 | 259 | 4.67e-44 | 159 |
MS.gene059972.t1 | AT1G04990 | 41.333 | 75 | 42 | 1 | 279 | 351 | 178 | 252 | 3.22e-11 | 65.5 |
MS.gene059972.t1 | AT2G47850 | 40.637 | 251 | 105 | 12 | 317 | 536 | 6 | 243 | 1.18e-39 | 148 |
MS.gene059972.t1 | AT2G47850 | 41.463 | 82 | 46 | 1 | 272 | 351 | 158 | 239 | 2.33e-16 | 81.3 |
MS.gene059972.t1 | AT2G47850 | 40.244 | 82 | 44 | 2 | 229 | 309 | 164 | 241 | 2.53e-12 | 68.9 |
MS.gene059972.t1 | AT1G04990 | 33.333 | 270 | 128 | 11 | 284 | 543 | 12 | 239 | 1.81e-35 | 135 |
MS.gene059972.t1 | AT1G48195 | 64.935 | 77 | 27 | 0 | 455 | 531 | 4 | 80 | 9.84e-33 | 120 |
MS.gene059972.t1 | AT1G48195 | 43.836 | 73 | 39 | 1 | 280 | 350 | 8 | 80 | 7.46e-14 | 67.4 |
Find 174 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTTATGGAATTTGCAAATT+TGG | 0.102331 | 8.1:+20186773 | MS.gene059972:CDS |
TCAGGTTCACCAGGCCTTTC+TGG | 0.111248 | 8.1:-20186385 | None:intergenic |
TGCAGTTTCTTCATTAAAAC+TGG | 0.219867 | 8.1:+20186409 | MS.gene059972:CDS |
GCTGGTTATGGTGCTGAATA+TGG | 0.227407 | 8.1:+20183913 | MS.gene059972:CDS |
ATTAGGGGAAGTGCGCTTTC+TGG | 0.242070 | 8.1:-20186818 | None:intergenic |
GAAAATAAATAACCTGGTTT+TGG | 0.252801 | 8.1:-20184110 | None:intergenic |
GTCTGGCCCGCGTTCTCTTC+TGG | 0.256661 | 8.1:-20184943 | None:intergenic |
ATCCATTCCAATCAGAAGTT+TGG | 0.261285 | 8.1:-20186043 | None:intergenic |
AGAGCCAGTGCGCATGTAAT+AGG | 0.276877 | 8.1:-20185814 | None:intergenic |
AACTTTGCAACCCGATTCTT+TGG | 0.276880 | 8.1:-20186469 | None:intergenic |
CGCACTGGCTCTTGTAAGTT+TGG | 0.291837 | 8.1:+20185825 | MS.gene059972:CDS |
GATGGTGGTGGTGCTGGTTA+TGG | 0.294963 | 8.1:+20183901 | MS.gene059972:CDS |
AGAAAGTTAAGTTCTGAAAT+TGG | 0.306141 | 8.1:-20185660 | None:intergenic |
GGTGGTGATGGTGGTGGTGC+TGG | 0.307134 | 8.1:+20183895 | MS.gene059972:CDS |
GAGCCAGTGCGCATGTAATA+GGG | 0.307860 | 8.1:-20185813 | None:intergenic |
TCCATTCCAATCAGAAGTTT+GGG | 0.314436 | 8.1:-20186042 | None:intergenic |
TAAACATTTGTTTCAATTGT+TGG | 0.327844 | 8.1:-20186325 | None:intergenic |
AAGACTGGGAGTTGCAAGTT+TGG | 0.332151 | 8.1:+20184048 | MS.gene059972:CDS |
GTTATGGAATTTGCAAATTT+GGG | 0.333323 | 8.1:+20186774 | MS.gene059972:CDS |
CTGAAATTGATGATAAAGTT+TGG | 0.348600 | 8.1:+20183590 | MS.gene059972:CDS |
GCAAATTTAATCACCCCATT+AGG | 0.348706 | 8.1:+20184079 | MS.gene059972:CDS |
TGGGGTTATGGTGGTGGTGA+TGG | 0.352887 | 8.1:+20183883 | MS.gene059972:CDS |
GACTACAAATGCAGGCTGTT+AGG | 0.359180 | 8.1:+20184896 | MS.gene059972:intron |
GGTTATGGTGGTGGTGATGG+TGG | 0.363462 | 8.1:+20183886 | MS.gene059972:CDS |
TTCTGATTGGAATGGATATC+AGG | 0.365728 | 8.1:+20186049 | MS.gene059972:CDS |
AGGTCTGGAGGCTGTAAGTT+TGG | 0.366141 | 8.1:+20185597 | MS.gene059972:CDS |
AATGAACAATCTTCAGCTTC+AGG | 0.368842 | 8.1:-20184018 | None:intergenic |
ATTTCAGAACTTAACTTTCT+CGG | 0.371138 | 8.1:+20185663 | MS.gene059972:CDS |
TTAATGAAGAAACTGCATTC+AGG | 0.373181 | 8.1:-20186403 | None:intergenic |
GTCCGAGTCCAGGCATCATT+AGG | 0.374587 | 8.1:-20186835 | None:intergenic |
GATGGTTATGGTGACGGTTA+TGG | 0.377832 | 8.1:+20183937 | MS.gene059972:CDS |
TGGTAGAGATGCTGATGATT+GGG | 0.379055 | 8.1:+20183864 | MS.gene059972:CDS |
TGCTCGCACTATAGTCGTTA+TGG | 0.385570 | 8.1:+20186758 | MS.gene059972:CDS |
TCCGAGTCCAGGCATCATTA+GGG | 0.386170 | 8.1:-20186834 | None:intergenic |
GTGGTAGAGATGCTGATGAT+TGG | 0.386802 | 8.1:+20183863 | MS.gene059972:CDS |
TTAGGGGAAGTGCGCTTTCT+GGG | 0.387787 | 8.1:-20186817 | None:intergenic |
GATGCTGATGATTGGGGTTA+TGG | 0.395182 | 8.1:+20183871 | MS.gene059972:CDS |
GCTGAATATGGGGATGGTTA+TGG | 0.402292 | 8.1:+20183925 | MS.gene059972:CDS |
ACTACAAATGCAGGCTGTTA+GGG | 0.405099 | 8.1:+20184897 | MS.gene059972:intron |
TTGCTCCCCAAACTTCTGAT+TGG | 0.407376 | 8.1:+20186036 | MS.gene059972:CDS |
AGAACCCAGTTGGGGTTCTT+CGG | 0.410763 | 8.1:-20183368 | None:intergenic |
TCAGCTAATGCTCAGGTGGC+TGG | 0.413776 | 8.1:+20186875 | MS.gene059972:CDS |
TATGGTGGTGGTGATGGTGG+TGG | 0.414901 | 8.1:+20183889 | MS.gene059972:CDS |
CTGGTTATGGTGCTGAATAT+GGG | 0.415399 | 8.1:+20183914 | MS.gene059972:CDS |
AATGCTCAGGTGGCTGGGAT+GGG | 0.415592 | 8.1:+20186881 | MS.gene059972:CDS |
AATTTCACCATCCAAAGAAT+CGG | 0.420180 | 8.1:+20186458 | MS.gene059972:CDS |
CAACGCCGAAGAACCCCAAC+TGG | 0.420728 | 8.1:+20183363 | MS.gene059972:CDS |
GAACTCATCAATTCCCTTTG+AGG | 0.425644 | 8.1:+20183995 | MS.gene059972:CDS |
AGATGAAGAAGAATCTGTTA+AGG | 0.426506 | 8.1:+20183732 | MS.gene059972:CDS |
TCATGAGAAGTTGGATTTGA+AGG | 0.428949 | 8.1:+20183486 | MS.gene059972:CDS |
TAATGCTCAGGTGGCTGGGA+TGG | 0.429440 | 8.1:+20186880 | MS.gene059972:CDS |
TTGAACCTCAGAACCCAGTT+GGG | 0.440942 | 8.1:-20183377 | None:intergenic |
GGAGGATCTGATCCTCAATC+AGG | 0.446882 | 8.1:+20185888 | MS.gene059972:CDS |
ATAAGTTGTACCAGACGAAT+AGG | 0.451170 | 8.1:-20185690 | None:intergenic |
AAACATTTGTTTCAATTGTT+GGG | 0.452056 | 8.1:-20186324 | None:intergenic |
GATGATTGGGGTTATGGTGG+TGG | 0.453539 | 8.1:+20183877 | MS.gene059972:CDS |
CGTTTGAAGTGTTTCCAGAA+AGG | 0.459964 | 8.1:+20186371 | MS.gene059972:CDS |
TGGCAGTATTATCAAAGGTC+TGG | 0.460554 | 8.1:+20185582 | MS.gene059972:intron |
TCAGATCCTCCGACAGTTGT+AGG | 0.460793 | 8.1:-20185876 | None:intergenic |
TCTCGGCTTACCTATTCGTC+TGG | 0.469076 | 8.1:+20185680 | MS.gene059972:CDS |
CAGTTGGGGTTCTTCGGCGT+TGG | 0.469787 | 8.1:-20183362 | None:intergenic |
TCTTCAGCTTCAGGCCTCAA+AGG | 0.471838 | 8.1:-20184009 | None:intergenic |
GAAGAAAGGGTTGATGTTGA+TGG | 0.473079 | 8.1:+20183781 | MS.gene059972:CDS |
CCTCCGACAGTTGTAGGATC+AGG | 0.473817 | 8.1:-20185870 | None:intergenic |
TGAGTAGGCGTAGGCATCAA+TGG | 0.474024 | 8.1:-20186008 | None:intergenic |
ATTTCACCATCCAAAGAATC+GGG | 0.474319 | 8.1:+20186459 | MS.gene059972:CDS |
GATGAAGAAGAATCTGTTAA+GGG | 0.476242 | 8.1:+20183733 | MS.gene059972:CDS |
CTTTCTGGAAACACTTCAAA+CGG | 0.476293 | 8.1:-20186370 | None:intergenic |
GCTCAGGTGGCTGGGATGGG+TGG | 0.478265 | 8.1:+20186884 | MS.gene059972:CDS |
GCTGATGATTGGGGTTATGG+TGG | 0.488921 | 8.1:+20183874 | MS.gene059972:CDS |
CCTCAATCAGGGTATGGTAA+TGG | 0.491280 | 8.1:+20185900 | MS.gene059972:CDS |
TGAAGTAGTTTCCGATGAAA+GGG | 0.495898 | 8.1:+20183564 | MS.gene059972:CDS |
CAATAACCTTGCATTCTGTC+TGG | 0.497455 | 8.1:-20184960 | None:intergenic |
GTGAAGTAGTTTCCGATGAA+AGG | 0.497509 | 8.1:+20183563 | MS.gene059972:CDS |
ATTTGTTGAGGGTGAAGAAA+GGG | 0.497561 | 8.1:+20183768 | MS.gene059972:CDS |
CATGATCCTCTCTGATAAGT+AGG | 0.504294 | 8.1:-20186272 | None:intergenic |
AATTTCAGCACCCCTTTCAT+CGG | 0.505143 | 8.1:-20183575 | None:intergenic |
GATTTGAAGGTTGAAGATGA+AGG | 0.507972 | 8.1:+20183499 | MS.gene059972:CDS |
AGAATCTCTGAAGGGTGAAA+AGG | 0.509352 | 8.1:+20183708 | MS.gene059972:CDS |
CTTCAGCTTCAGGCCTCAAA+GGG | 0.509655 | 8.1:-20184008 | None:intergenic |
AAGGTTGGGATACTAATAGT+TGG | 0.510691 | 8.1:+20183812 | MS.gene059972:CDS |
AAGGCAGGCCCTTGTCACTA+AGG | 0.511305 | 8.1:-20186504 | None:intergenic |
CAGCTAATGCTCAGGTGGCT+GGG | 0.512237 | 8.1:+20186876 | MS.gene059972:CDS |
CCCCTAATGATGCCTGGACT+CGG | 0.513603 | 8.1:+20186833 | MS.gene059972:CDS |
TTGCAACCCGATTCTTTGGA+TGG | 0.514387 | 8.1:-20186465 | None:intergenic |
TATGGTGACGGTTATGGCTA+TGG | 0.516935 | 8.1:+20183943 | MS.gene059972:CDS |
TGTAAGTACAACCACTCAAG+AGG | 0.517355 | 8.1:+20185627 | MS.gene059972:CDS |
TGAACGAGTTGGAGATGAAA+GGG | 0.517944 | 8.1:+20183627 | MS.gene059972:CDS |
AACTTACAGGTCTCAAAGGC+AGG | 0.518963 | 8.1:-20186519 | None:intergenic |
TGATGGAGACAGCAAAGGTT+GGG | 0.522384 | 8.1:+20183798 | MS.gene059972:CDS |
GTAGGCATCAATGGAGCAAA+AGG | 0.524117 | 8.1:-20185999 | None:intergenic |
TGCAAACTCAGCTAATGCTC+AGG | 0.524400 | 8.1:+20186868 | MS.gene059972:CDS |
AATTTGTTGAGGGTGAAGAA+AGG | 0.527651 | 8.1:+20183767 | MS.gene059972:CDS |
TAGGATTGTTGTCCGAGTCC+AGG | 0.528151 | 8.1:-20186845 | None:intergenic |
TTCATGACATAAGTAGAAGA+TGG | 0.528240 | 8.1:-20186298 | None:intergenic |
CCCCAAACTTCTGATTGGAA+TGG | 0.532005 | 8.1:+20186041 | MS.gene059972:CDS |
AATTTAATCACCCCATTAGG+AGG | 0.533115 | 8.1:+20184082 | MS.gene059972:CDS |
GAAGAAGACCATGAGGCGAC+AGG | 0.533137 | 8.1:-20185957 | None:intergenic |
TTGATGGAGACAGCAAAGGT+TGG | 0.534457 | 8.1:+20183797 | MS.gene059972:CDS |
ACCGTCAGATCTCAATCAAA+CGG | 0.540872 | 8.1:+20183429 | MS.gene059972:CDS |
GGTGGAGAATGATGATCAAC+TGG | 0.542231 | 8.1:-20183409 | None:intergenic |
TGATACACCTCGTAGTGAAA+CGG | 0.547266 | 8.1:-20185928 | None:intergenic |
TCTGATCCTCAATCAGGGTA+TGG | 0.550275 | 8.1:+20185894 | MS.gene059972:CDS |
CACAACAACCTGTCGCCTCA+TGG | 0.551262 | 8.1:+20185949 | MS.gene059972:CDS |
TTTAACGATGGTGAACGAGT+TGG | 0.552952 | 8.1:+20183616 | MS.gene059972:CDS |
GTGAACGAGTTGGAGATGAA+AGG | 0.554304 | 8.1:+20183626 | MS.gene059972:CDS |
CCATTACCATACCCTGATTG+AGG | 0.554709 | 8.1:-20185900 | None:intergenic |
GCACTTCCCCTAATGATGCC+TGG | 0.554943 | 8.1:+20186827 | MS.gene059972:CDS |
TGTGGAGCTTCATGAGAAGT+TGG | 0.556036 | 8.1:+20183477 | MS.gene059972:CDS |
ATCCTCTCTGATAAGTAGGC+AGG | 0.557199 | 8.1:-20186268 | None:intergenic |
TGGTATGGCAGTATTATCAA+AGG | 0.558128 | 8.1:+20185577 | MS.gene059972:intron |
GTAAGTTTGGATCGAACTGT+AGG | 0.559636 | 8.1:+20185838 | MS.gene059972:CDS |
AGAAGAACCAGAAGAGAACG+CGG | 0.561387 | 8.1:+20184936 | MS.gene059972:CDS |
CAATCAGGGTATGGTAATGG+AGG | 0.562537 | 8.1:+20185903 | MS.gene059972:CDS |
AAAGTTTCGAACTTTAACGA+TGG | 0.565585 | 8.1:+20183541 | MS.gene059972:CDS |
AAAGTTTGGAACTTTAACGA+TGG | 0.565585 | 8.1:+20183604 | MS.gene059972:CDS |
CATCCTGATCCTACAACTGT+CGG | 0.566670 | 8.1:+20185867 | MS.gene059972:CDS |
AAGGAAGAGAAAAGCAGCGA+TGG | 0.568512 | 8.1:+20183973 | MS.gene059972:CDS |
GTTGAACCTCAGAACCCAGT+TGG | 0.568812 | 8.1:-20183378 | None:intergenic |
GAGAATGTGAATGAAGAGCT+TGG | 0.570679 | 8.1:+20183838 | MS.gene059972:CDS |
GTGCTGTGAACCCTCTTGAG+TGG | 0.572535 | 8.1:-20185638 | None:intergenic |
GCAGTTTCTTCATTAAAACT+GGG | 0.573129 | 8.1:+20186410 | MS.gene059972:CDS |
TGCCCCTATTACATGCGCAC+TGG | 0.574720 | 8.1:+20185810 | MS.gene059972:CDS |
GGGTGGTCAAATCTACAAGC+TGG | 0.574834 | 8.1:-20186797 | None:intergenic |
GAAAATGAAGAATTTGTTGA+GGG | 0.575745 | 8.1:+20183757 | MS.gene059972:CDS |
CGCGGGCCAGACAGAATGCA+AGG | 0.576542 | 8.1:+20184954 | MS.gene059972:CDS |
GTGAATGAAGAGCTTGGTGG+TGG | 0.580195 | 8.1:+20183844 | MS.gene059972:CDS |
CCCTTGTCACTAAGGTTGCA+AGG | 0.581869 | 8.1:-20186496 | None:intergenic |
AAACTGCATTCAGGTTCACC+AGG | 0.584269 | 8.1:-20186394 | None:intergenic |
GGTAGAGATGCTGATGATTG+GGG | 0.586505 | 8.1:+20183865 | MS.gene059972:CDS |
TGGTTATGGTGCTGAATATG+GGG | 0.591645 | 8.1:+20183915 | MS.gene059972:CDS |
ACCGTTTGATTGAGATCTGA+CGG | 0.592753 | 8.1:-20183430 | None:intergenic |
GAAGAACCAGAAGAGAACGC+GGG | 0.593025 | 8.1:+20184937 | MS.gene059972:CDS |
AATGCAGGCTGTTAGGGAGA+AGG | 0.594662 | 8.1:+20184903 | MS.gene059972:intron |
GAATGATGATGAACTTGCTG+TGG | 0.596550 | 8.1:+20183459 | MS.gene059972:CDS |
AGCATTAGCTGAGTTTGCAT+AGG | 0.596874 | 8.1:-20186864 | None:intergenic |
AGCCAGTGCGCATGTAATAG+GGG | 0.597843 | 8.1:-20185812 | None:intergenic |
TCCTTGCAACCTTAGTGACA+AGG | 0.599462 | 8.1:+20186495 | MS.gene059972:CDS |
TATAGTGCGAGCAGACACTC+TGG | 0.602814 | 8.1:-20186748 | None:intergenic |
CAGTTTCTTCATTAAAACTG+GGG | 0.603026 | 8.1:+20186411 | MS.gene059972:CDS |
TATGGGGATGGTTATGGTGA+CGG | 0.603183 | 8.1:+20183931 | MS.gene059972:CDS |
TTTGATGATGGCGAACGAGT+TGG | 0.603613 | 8.1:+20183679 | MS.gene059972:CDS |
GCATAACTTACAGGTCTCAA+AGG | 0.605332 | 8.1:-20186523 | None:intergenic |
AGAACCCCAACTGGGTTCTG+AGG | 0.606153 | 8.1:+20183372 | MS.gene059972:CDS |
GAAGTGTTTCCAGAAAGGCC+TGG | 0.609811 | 8.1:+20186376 | MS.gene059972:CDS |
TGGGGAGCAAGTCCTTGAGT+AGG | 0.610371 | 8.1:-20186023 | None:intergenic |
TGGTGATGAAGAATCTCTGA+AGG | 0.613878 | 8.1:+20183699 | MS.gene059972:CDS |
CAGTATTATCAAAGGTCTGG+AGG | 0.614088 | 8.1:+20185585 | MS.gene059972:intron |
TATGGTGCTGAATATGGGGA+TGG | 0.616633 | 8.1:+20183919 | MS.gene059972:CDS |
TGAACCTCAGAACCCAGTTG+GGG | 0.617408 | 8.1:-20183376 | None:intergenic |
TTATGGCTATGGTGATGAGA+AGG | 0.619525 | 8.1:+20183954 | MS.gene059972:CDS |
GCAAGTCCTTGAGTAGGCGT+AGG | 0.625756 | 8.1:-20186017 | None:intergenic |
AAACTCAGCTAATGCTCAGG+TGG | 0.626361 | 8.1:+20186871 | MS.gene059972:CDS |
TGAAAATGAAGAATTTGTTG+AGG | 0.627596 | 8.1:+20183756 | MS.gene059972:CDS |
TTGATGCCTACGCCTACTCA+AGG | 0.631915 | 8.1:+20186011 | MS.gene059972:CDS |
GAGGATCTGATCCTCAATCA+GGG | 0.641104 | 8.1:+20185889 | MS.gene059972:CDS |
CCGAGTCCAGGCATCATTAG+GGG | 0.648980 | 8.1:-20186833 | None:intergenic |
GGGGAAGTGCGCTTTCTGGG+TGG | 0.653467 | 8.1:-20186814 | None:intergenic |
AATCAGGGTATGGTAATGGA+GGG | 0.653641 | 8.1:+20185904 | MS.gene059972:CDS |
CCTTGCAACCTTAGTGACAA+GGG | 0.655446 | 8.1:+20186496 | MS.gene059972:CDS |
GAAGTAGTTTCCGATGAAAG+GGG | 0.663972 | 8.1:+20183565 | MS.gene059972:CDS |
AACGCCGAAGAACCCCAACT+GGG | 0.666568 | 8.1:+20183364 | MS.gene059972:CDS |
GTAAGTACAACCACTCAAGA+GGG | 0.671707 | 8.1:+20185628 | MS.gene059972:CDS |
CTTTCTTGAAGAAGACCATG+AGG | 0.682349 | 8.1:-20185964 | None:intergenic |
GGAGGGTCCGTTTCACTACG+AGG | 0.682956 | 8.1:+20185921 | MS.gene059972:CDS |
GATGTTGATGGAGACAGCAA+AGG | 0.687704 | 8.1:+20183793 | MS.gene059972:CDS |
CCATTCCAATCAGAAGTTTG+GGG | 0.688247 | 8.1:-20186041 | None:intergenic |
CACCTGCCTACTTATCAGAG+AGG | 0.690749 | 8.1:+20186266 | MS.gene059972:CDS |
CCTGATCCTACAACTGTCGG+AGG | 0.708304 | 8.1:+20185870 | MS.gene059972:CDS |
GAACGAGTTGGAGATGAAAG+GGG | 0.725208 | 8.1:+20183628 | MS.gene059972:CDS |
AATGTGAATGAAGAGCTTGG+TGG | 0.733698 | 8.1:+20183841 | MS.gene059972:CDS |
GTTTGATTGAGATCTGACGG+TGG | 0.735022 | 8.1:-20183427 | None:intergenic |
GGTGATGAAGAATCTCTGAA+GGG | 0.735452 | 8.1:+20183700 | MS.gene059972:CDS |
TTGTCACTAAGGTTGCAAGG+AGG | 0.772375 | 8.1:-20186493 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATTGATTTTTATCTTT+TGG | + | chr8.1:20185557-20185576 | MS.gene059972:intron | 10.0% |
!!! | AAATATTCTTTTCTTTGTTT+TGG | + | chr8.1:20184867-20184886 | MS.gene059972:intron | 15.0% |
!! | AAAAATCACAATTCAACATT+AGG | - | chr8.1:20184365-20184384 | None:intergenic | 20.0% |
!! | AAACATTTGTTTCAATTGTT+GGG | - | chr8.1:20186327-20186346 | None:intergenic | 20.0% |
!! | ATTCCTTGATTAATAATTAC+TGG | + | chr8.1:20185299-20185318 | MS.gene059972:intron | 20.0% |
!! | GATATTATATATCTTCTCAA+TGG | - | chr8.1:20185718-20185737 | None:intergenic | 20.0% |
!! | TAAACATTTGTTTCAATTGT+TGG | - | chr8.1:20186328-20186347 | None:intergenic | 20.0% |
!!! | AGTTTTTTTTTGAAGTAGAT+TGG | + | chr8.1:20186681-20186700 | MS.gene059972:intron | 20.0% |
!!! | ATCTTTAAAAGATAATTGAC+AGG | + | chr8.1:20186567-20186586 | MS.gene059972:intron | 20.0% |
!!! | CCATTTTTTCAAATTATTAC+GGG | - | chr8.1:20184469-20184488 | None:intergenic | 20.0% |
!!! | GCCATTTTTTCAAATTATTA+CGG | - | chr8.1:20184470-20184489 | None:intergenic | 20.0% |
!!! | TAATGTTGAATTGTGATTTT+TGG | + | chr8.1:20184364-20184383 | MS.gene059972:intron | 20.0% |
!!! | TCTTTAAAAGATAATTGACA+GGG | + | chr8.1:20186568-20186587 | MS.gene059972:intron | 20.0% |
!!! | TTAAAATGTTTTGTGTTACA+GGG | + | chr8.1:20185777-20185796 | MS.gene059972:intron | 20.0% |
!!! | TTGATTTTTATCTTTTGGTA+TGG | + | chr8.1:20185562-20185581 | MS.gene059972:intron | 20.0% |
!!! | TTTAAAATGTTTTGTGTTAC+AGG | + | chr8.1:20185776-20185795 | MS.gene059972:intron | 20.0% |
!!! | TTTTATTTGTCTTTAAATCC+AGG | + | chr8.1:20186724-20186743 | MS.gene059972:intron | 20.0% |
! | AATAAACTCTAGTAACTACT+AGG | - | chr8.1:20186602-20186621 | None:intergenic | 25.0% |
! | ACTAGGAATATAACTAAAGT+CGG | - | chr8.1:20184681-20184700 | None:intergenic | 25.0% |
! | AGCAAGGATAATATTGATAA+TGG | + | chr8.1:20185493-20185512 | MS.gene059972:intron | 25.0% |
! | ATTTCAGAACTTAACTTTCT+CGG | + | chr8.1:20185663-20185682 | MS.gene059972:CDS | 25.0% |
! | CCCGTAATAATTTGAAAAAA+TGG | + | chr8.1:20184466-20184485 | MS.gene059972:intron | 25.0% |
! | GAAAGAGAAAATAAATAACC+TGG | - | chr8.1:20184119-20184138 | None:intergenic | 25.0% |
! | GGAAATGAAAAAAACATGTT+AGG | - | chr8.1:20185135-20185154 | None:intergenic | 25.0% |
! | GTTATGGAATTTGCAAATTT+GGG | + | chr8.1:20186774-20186793 | MS.gene059972:CDS | 25.0% |
! | TAAGATCGCATAATAGAAAA+TGG | - | chr8.1:20186157-20186176 | None:intergenic | 25.0% |
! | TATGGCATTGTTGAAATTTA+AGG | + | chr8.1:20184212-20184231 | MS.gene059972:intron | 25.0% |
! | TTATCAATATTATCCTTGCT+AGG | - | chr8.1:20185493-20185512 | None:intergenic | 25.0% |
!! | CTGAAATTGATGATAAAGTT+TGG | + | chr8.1:20183590-20183609 | MS.gene059972:CDS | 25.0% |
!! | GAAAATAAATAACCTGGTTT+TGG | - | chr8.1:20184113-20184132 | None:intergenic | 25.0% |
!! | GTTCATTTTATATGAAGACT+GGG | + | chr8.1:20184034-20184053 | MS.gene059972:CDS | 25.0% |
!! | TGTTCATTTTATATGAAGAC+TGG | + | chr8.1:20184033-20184052 | MS.gene059972:CDS | 25.0% |
!!! | AAAGTTTTGAACTTTGATGA+TGG | + | chr8.1:20183667-20183686 | MS.gene059972:CDS | 25.0% |
!!! | AGAAAGTTAAGTTCTGAAAT+TGG | - | chr8.1:20185663-20185682 | None:intergenic | 25.0% |
!!! | CTGAATGTAGTATTTTTGAT+TGG | + | chr8.1:20184300-20184319 | MS.gene059972:intron | 25.0% |
!!! | GAAAATGAAGAATTTGTTGA+GGG | + | chr8.1:20183757-20183776 | MS.gene059972:CDS | 25.0% |
!!! | TGAAAATGAAGAATTTGTTG+AGG | + | chr8.1:20183756-20183775 | MS.gene059972:CDS | 25.0% |
AAAAAATAATCCTTGCCAGA+TGG | - | chr8.1:20186101-20186120 | None:intergenic | 30.0% | |
AAAACTTGTAAGAGTTCAGT+TGG | - | chr8.1:20186211-20186230 | None:intergenic | 30.0% | |
AAAGTTTCGAACTTTAACGA+TGG | + | chr8.1:20183541-20183560 | MS.gene059972:CDS | 30.0% | |
AATAACTGTTGCATCTTTGT+TGG | + | chr8.1:20184333-20184352 | MS.gene059972:intron | 30.0% | |
AATATGTAACTCATGGAACA+GGG | - | chr8.1:20186185-20186204 | None:intergenic | 30.0% | |
AATTTCACCATCCAAAGAAT+CGG | + | chr8.1:20186458-20186477 | MS.gene059972:CDS | 30.0% | |
ACAGACAAGTCAAATTGATT+AGG | - | chr8.1:20186234-20186253 | None:intergenic | 30.0% | |
ACATAGCAAACATGTTCTAT+TGG | + | chr8.1:20184803-20184822 | MS.gene059972:intron | 30.0% | |
AGAACTAACTAATCAAGCAA+TGG | - | chr8.1:20184657-20184676 | None:intergenic | 30.0% | |
AGATGAAGAAGAATCTGTTA+AGG | + | chr8.1:20183732-20183751 | MS.gene059972:CDS | 30.0% | |
ATAAACGATCTATGACCTTA+AGG | - | chr8.1:20185166-20185185 | None:intergenic | 30.0% | |
ATATAGTAGAAGATCTCACT+AGG | - | chr8.1:20184698-20184717 | None:intergenic | 30.0% | |
CAGCCAGTAATTATTAATCA+AGG | - | chr8.1:20185305-20185324 | None:intergenic | 30.0% | |
CAGTTTCTTCATTAAAACTG+GGG | + | chr8.1:20186411-20186430 | MS.gene059972:CDS | 30.0% | |
CGTTATGGAATTTGCAAATT+TGG | + | chr8.1:20186773-20186792 | MS.gene059972:CDS | 30.0% | |
GATCGTTTATGTTCAATCTT+AGG | + | chr8.1:20185176-20185195 | MS.gene059972:intron | 30.0% | |
GATGAAGAAGAATCTGTTAA+GGG | + | chr8.1:20183733-20183752 | MS.gene059972:CDS | 30.0% | |
GCAGTTTCTTCATTAAAACT+GGG | + | chr8.1:20186410-20186429 | MS.gene059972:CDS | 30.0% | |
TAGTGAGATCTTCTACTATA+TGG | + | chr8.1:20184697-20184716 | MS.gene059972:intron | 30.0% | |
TCAACAATGCCATATCTAAA+GGG | - | chr8.1:20184206-20184225 | None:intergenic | 30.0% | |
TGCAGTTTCTTCATTAAAAC+TGG | + | chr8.1:20186409-20186428 | MS.gene059972:CDS | 30.0% | |
TTAATGAAGAAACTGCATTC+AGG | - | chr8.1:20186406-20186425 | None:intergenic | 30.0% | |
TTCAACAATGCCATATCTAA+AGG | - | chr8.1:20184207-20184226 | None:intergenic | 30.0% | |
TTCATGACATAAGTAGAAGA+TGG | - | chr8.1:20186301-20186320 | None:intergenic | 30.0% | |
TTGGTAGAATATGTAACTCA+TGG | - | chr8.1:20186192-20186211 | None:intergenic | 30.0% | |
TTTATTATGCTTTCCTAGCA+AGG | + | chr8.1:20185477-20185496 | MS.gene059972:intron | 30.0% | |
! | AAAGTTTGGAACTTTAACGA+TGG | + | chr8.1:20183604-20183623 | MS.gene059972:CDS | 30.0% |
! | ACTTTTACTTGTAGTACCAA+GGG | + | chr8.1:20185228-20185247 | MS.gene059972:intron | 30.0% |
! | AGAGAAAGTTTTACTTTAGG+AGG | + | chr8.1:20184752-20184771 | MS.gene059972:intron | 30.0% |
! | GGAAGAGAAAGTTTTACTTT+AGG | + | chr8.1:20184749-20184768 | MS.gene059972:intron | 30.0% |
! | GGATTAATAGATGTCACTTA+TGG | + | chr8.1:20185329-20185348 | MS.gene059972:intron | 30.0% |
! | TTAATAATTACTGGCTGCTT+AGG | + | chr8.1:20185308-20185327 | MS.gene059972:intron | 30.0% |
! | TTAGTATGATTAGTCGTATG+AGG | + | chr8.1:20186640-20186659 | MS.gene059972:intron | 30.0% |
!! | ACAAAAACAAAGGGTATTTG+GGG | - | chr8.1:20184261-20184280 | None:intergenic | 30.0% |
!! | CACAAAAACAAAGGGTATTT+GGG | - | chr8.1:20184262-20184281 | None:intergenic | 30.0% |
!! | GAGAAAGTTTTACTTTAGGA+GGG | + | chr8.1:20184753-20184772 | MS.gene059972:intron | 30.0% |
!! | GTATTTTTGATTGGAAGAAC+TGG | + | chr8.1:20184309-20184328 | MS.gene059972:intron | 30.0% |
!! | TAATCAATTTGACTTGTCTG+TGG | + | chr8.1:20186233-20186252 | MS.gene059972:intron | 30.0% |
!!! | TGCCTTTAAAATGTCTGTTT+TGG | + | chr8.1:20184612-20184631 | MS.gene059972:intron | 30.0% |
!!! | TGGTTGTTTGGTTTTTACAA+TGG | + | chr8.1:20185423-20185442 | MS.gene059972:intron | 30.0% |
!!! | TTCTATTGGCTTTTATGACT+GGG | + | chr8.1:20184817-20184836 | MS.gene059972:intron | 30.0% |
!!! | TTTTGGTTTTTCCTCCTAAT+GGG | - | chr8.1:20184096-20184115 | None:intergenic | 30.0% |
AAAACAGCAGCATAACTTAC+AGG | - | chr8.1:20186535-20186554 | None:intergenic | 35.0% | |
AAGGTTGGGATACTAATAGT+TGG | + | chr8.1:20183812-20183831 | MS.gene059972:CDS | 35.0% | |
AATGAACAATCTTCAGCTTC+AGG | - | chr8.1:20184021-20184040 | None:intergenic | 35.0% | |
AATGTCCACCACAAAAACAA+AGG | - | chr8.1:20184271-20184290 | None:intergenic | 35.0% | |
AATTTAATCACCCCATTAGG+AGG | + | chr8.1:20184082-20184101 | MS.gene059972:CDS | 35.0% | |
ATAAGTTGTACCAGACGAAT+AGG | - | chr8.1:20185693-20185712 | None:intergenic | 35.0% | |
ATATGTAACTCATGGAACAG+GGG | - | chr8.1:20186184-20186203 | None:intergenic | 35.0% | |
ATCCATTCCAATCAGAAGTT+TGG | - | chr8.1:20186046-20186065 | None:intergenic | 35.0% | |
ATCTTCTACTATATGGCGTA+AGG | + | chr8.1:20184704-20184723 | MS.gene059972:intron | 35.0% | |
ATGTCCACCACAAAAACAAA+GGG | - | chr8.1:20184270-20184289 | None:intergenic | 35.0% | |
ATTCAATACCAAAAGCCATC+TGG | + | chr8.1:20186083-20186102 | MS.gene059972:intron | 35.0% | |
ATTTCACCATCCAAAGAATC+GGG | + | chr8.1:20186459-20186478 | MS.gene059972:CDS | 35.0% | |
CTGATGAATCCCTTTAGATA+TGG | + | chr8.1:20184194-20184213 | MS.gene059972:intron | 35.0% | |
CTTCGCTAGGGTTATAAAAA+TGG | + | chr8.1:20184728-20184747 | MS.gene059972:intron | 35.0% | |
GAATATGTAACTCATGGAAC+AGG | - | chr8.1:20186186-20186205 | None:intergenic | 35.0% | |
GATTTGAAGGTTGAAGATGA+AGG | + | chr8.1:20183499-20183518 | MS.gene059972:CDS | 35.0% | |
GCAAATTTAATCACCCCATT+AGG | + | chr8.1:20184079-20184098 | MS.gene059972:CDS | 35.0% | |
TATGAGGCTACTAAGTAGAT+TGG | + | chr8.1:20186656-20186675 | MS.gene059972:intron | 35.0% | |
TATGTGCTTCAAAGATTGCA+AGG | - | chr8.1:20184404-20184423 | None:intergenic | 35.0% | |
TCATGAGAAGTTGGATTTGA+AGG | + | chr8.1:20183486-20183505 | MS.gene059972:CDS | 35.0% | |
TCCATTCCAATCAGAAGTTT+GGG | - | chr8.1:20186045-20186064 | None:intergenic | 35.0% | |
TGAAGTAGTTTCCGATGAAA+GGG | + | chr8.1:20183564-20183583 | MS.gene059972:CDS | 35.0% | |
TGGTATGGCAGTATTATCAA+AGG | + | chr8.1:20185577-20185596 | MS.gene059972:intron | 35.0% | |
TTACTATCACACTATCACTC+TGG | + | chr8.1:20185027-20185046 | MS.gene059972:intron | 35.0% | |
TTCTGATTGGAATGGATATC+AGG | + | chr8.1:20186049-20186068 | MS.gene059972:CDS | 35.0% | |
! | ACGACTTCTATTAGAAGTGT+CGG | + | chr8.1:20184565-20184584 | MS.gene059972:intron | 35.0% |
! | ATTTGTTGAGGGTGAAGAAA+GGG | + | chr8.1:20183768-20183787 | MS.gene059972:CDS | 35.0% |
! | CACTTTTACTTGTAGTACCA+AGG | + | chr8.1:20185227-20185246 | MS.gene059972:intron | 35.0% |
! | CTTTCTGGAAACACTTCAAA+CGG | - | chr8.1:20186373-20186392 | None:intergenic | 35.0% |
! | CTTTTACTTGTAGTACCAAG+GGG | + | chr8.1:20185229-20185248 | MS.gene059972:intron | 35.0% |
! | GGCCAAAACAGACATTTTAA+AGG | - | chr8.1:20184617-20184636 | None:intergenic | 35.0% |
! | TGATAGTGTTAGTGTCATGT+CGG | + | chr8.1:20184511-20184530 | MS.gene059972:intron | 35.0% |
!! | AATTTGTTGAGGGTGAAGAA+AGG | + | chr8.1:20183767-20183786 | MS.gene059972:CDS | 35.0% |
!! | CAATCTTTGAAGCACATACA+CGG | + | chr8.1:20184406-20184425 | MS.gene059972:intron | 35.0% |
!! | CCACAAAAACAAAGGGTATT+TGG | - | chr8.1:20184263-20184282 | None:intergenic | 35.0% |
!!! | AATACCCTTTGTTTTTGTGG+TGG | + | chr8.1:20184263-20184282 | MS.gene059972:intron | 35.0% |
!!! | CCAAATACCCTTTGTTTTTG+TGG | + | chr8.1:20184260-20184279 | MS.gene059972:intron | 35.0% |
!!! | GTTCTATTGGCTTTTATGAC+TGG | + | chr8.1:20184816-20184835 | MS.gene059972:intron | 35.0% |
!!! | GTTTTGGTTTTTCCTCCTAA+TGG | - | chr8.1:20184097-20184116 | None:intergenic | 35.0% |
!!! | TTTGGTTTTTCCTCCTAATG+GGG | - | chr8.1:20184095-20184114 | None:intergenic | 35.0% |
AACTTTGCAACCCGATTCTT+TGG | - | chr8.1:20186472-20186491 | None:intergenic | 40.0% | |
AATGTGAATGAAGAGCTTGG+TGG | + | chr8.1:20183841-20183860 | MS.gene059972:CDS | 40.0% | |
AATTTCAGCACCCCTTTCAT+CGG | - | chr8.1:20183578-20183597 | None:intergenic | 40.0% | |
ACCGTCAGATCTCAATCAAA+CGG | + | chr8.1:20183429-20183448 | MS.gene059972:CDS | 40.0% | |
ACCGTTTGATTGAGATCTGA+CGG | - | chr8.1:20183433-20183452 | None:intergenic | 40.0% | |
ACTACAAATGCAGGCTGTTA+GGG | + | chr8.1:20184897-20184916 | MS.gene059972:intron | 40.0% | |
AGCATTAGCTGAGTTTGCAT+AGG | - | chr8.1:20186867-20186886 | None:intergenic | 40.0% | |
AGGAAGCAAACATGGTTGTT+TGG | + | chr8.1:20185411-20185430 | MS.gene059972:intron | 40.0% | |
ATAAACCTTGCACACAGTCA+CGG | - | chr8.1:20185098-20185117 | None:intergenic | 40.0% | |
ATGGCACAGACAAAAAACAG+AGG | - | chr8.1:20184638-20184657 | None:intergenic | 40.0% | |
CAATAACCTTGCATTCTGTC+TGG | - | chr8.1:20184963-20184982 | None:intergenic | 40.0% | |
CAGTATTATCAAAGGTCTGG+AGG | + | chr8.1:20185585-20185604 | MS.gene059972:intron | 40.0% | |
CATGATCCTCTCTGATAAGT+AGG | - | chr8.1:20186275-20186294 | None:intergenic | 40.0% | |
CATTTCCTTGTGTCACCTTA+AGG | + | chr8.1:20185148-20185167 | MS.gene059972:intron | 40.0% | |
CCATTCCAATCAGAAGTTTG+GGG | - | chr8.1:20186044-20186063 | None:intergenic | 40.0% | |
CTTTCTTGAAGAAGACCATG+AGG | - | chr8.1:20185967-20185986 | None:intergenic | 40.0% | |
GAACTCATCAATTCCCTTTG+AGG | + | chr8.1:20183995-20184014 | MS.gene059972:CDS | 40.0% | |
GAAGTAGTTTCCGATGAAAG+GGG | + | chr8.1:20183565-20183584 | MS.gene059972:CDS | 40.0% | |
GAGAATGTGAATGAAGAGCT+TGG | + | chr8.1:20183838-20183857 | MS.gene059972:CDS | 40.0% | |
GCATAACTTACAGGTCTCAA+AGG | - | chr8.1:20186526-20186545 | None:intergenic | 40.0% | |
GGTGATGAAGAATCTCTGAA+GGG | + | chr8.1:20183700-20183719 | MS.gene059972:CDS | 40.0% | |
GTAAGTACAACCACTCAAGA+GGG | + | chr8.1:20185628-20185647 | MS.gene059972:CDS | 40.0% | |
GTAAGTTTGGATCGAACTGT+AGG | + | chr8.1:20185838-20185857 | MS.gene059972:CDS | 40.0% | |
GTGAAGTAGTTTCCGATGAA+AGG | + | chr8.1:20183563-20183582 | MS.gene059972:CDS | 40.0% | |
GTGTCAGACACTAACATTGT+CGG | + | chr8.1:20184533-20184552 | MS.gene059972:intron | 40.0% | |
TAGGAGGAAAAACCAAAACC+AGG | + | chr8.1:20184098-20184117 | MS.gene059972:CDS | 40.0% | |
TATGACCTTAAGGTGACACA+AGG | - | chr8.1:20185156-20185175 | None:intergenic | 40.0% | |
TATGTCCTACTCTTTAACCC+AGG | - | chr8.1:20185256-20185275 | None:intergenic | 40.0% | |
TGATACACCTCGTAGTGAAA+CGG | - | chr8.1:20185931-20185950 | None:intergenic | 40.0% | |
TGGCAGTATTATCAAAGGTC+TGG | + | chr8.1:20185582-20185601 | MS.gene059972:intron | 40.0% | |
TGGTAGAGATGCTGATGATT+GGG | + | chr8.1:20183864-20183883 | MS.gene059972:CDS | 40.0% | |
TGTAAGTACAACCACTCAAG+AGG | + | chr8.1:20185627-20185646 | MS.gene059972:CDS | 40.0% | |
TTATGGACACTCTGATTCTC+AGG | + | chr8.1:20185346-20185365 | MS.gene059972:intron | 40.0% | |
TTTAACGATGGTGAACGAGT+TGG | + | chr8.1:20183616-20183635 | MS.gene059972:CDS | 40.0% | |
! | AGAATCTCTGAAGGGTGAAA+AGG | + | chr8.1:20183708-20183727 | MS.gene059972:CDS | 40.0% |
! | CGTTTGAAGTGTTTCCAGAA+AGG | + | chr8.1:20186371-20186390 | MS.gene059972:CDS | 40.0% |
! | CTGGTTATGGTGCTGAATAT+GGG | + | chr8.1:20183914-20183933 | MS.gene059972:CDS | 40.0% |
! | GACTTGTCTGTGGTTTGTAA+AGG | + | chr8.1:20186243-20186262 | MS.gene059972:intron | 40.0% |
! | GTAAAAGTGCAGAACAACGT+CGG | - | chr8.1:20185216-20185235 | None:intergenic | 40.0% |
! | TGAACGAGTTGGAGATGAAA+GGG | + | chr8.1:20183627-20183646 | MS.gene059972:CDS | 40.0% |
! | TGGTGATGAAGAATCTCTGA+AGG | + | chr8.1:20183699-20183718 | MS.gene059972:CDS | 40.0% |
! | TGGTTATGGTGCTGAATATG+GGG | + | chr8.1:20183915-20183934 | MS.gene059972:CDS | 40.0% |
! | TTATGGCTATGGTGATGAGA+AGG | + | chr8.1:20183954-20183973 | MS.gene059972:CDS | 40.0% |
! | TTTACTTTAGGAGGGACAGT+AGG | + | chr8.1:20184761-20184780 | MS.gene059972:intron | 40.0% |
!! | AATCAGGGTATGGTAATGGA+GGG | + | chr8.1:20185904-20185923 | MS.gene059972:CDS | 40.0% |
!! | GAAGAAAGGGTTGATGTTGA+TGG | + | chr8.1:20183781-20183800 | MS.gene059972:CDS | 40.0% |
!! | GAATGATGATGAACTTGCTG+TGG | + | chr8.1:20183459-20183478 | MS.gene059972:CDS | 40.0% |
!!! | GGTGTTTTGACTACAAATGC+AGG | + | chr8.1:20184888-20184907 | MS.gene059972:intron | 40.0% |
!!! | TGCTGCTGTTTTTGCTTCTA+TGG | + | chr8.1:20186543-20186562 | MS.gene059972:intron | 40.0% |
AAACTCAGCTAATGCTCAGG+TGG | + | chr8.1:20186871-20186890 | MS.gene059972:CDS | 45.0% | |
AACTTACAGGTCTCAAAGGC+AGG | - | chr8.1:20186522-20186541 | None:intergenic | 45.0% | |
AAGACTGGGAGTTGCAAGTT+TGG | + | chr8.1:20184048-20184067 | MS.gene059972:CDS | 45.0% | |
AAGGAAGAGAAAAGCAGCGA+TGG | + | chr8.1:20183973-20183992 | MS.gene059972:CDS | 45.0% | |
ACGAACAGAGGAAGCAAACA+TGG | + | chr8.1:20185403-20185422 | MS.gene059972:intron | 45.0% | |
AGAAGAACCAGAAGAGAACG+CGG | + | chr8.1:20184936-20184955 | MS.gene059972:CDS | 45.0% | |
ATACCAAAAGCCATCTGGCA+AGG | + | chr8.1:20186088-20186107 | MS.gene059972:intron | 45.0% | |
ATCCTCTCTGATAAGTAGGC+AGG | - | chr8.1:20186271-20186290 | None:intergenic | 45.0% | |
ATGTTTGCTTCCTCTGTTCG+TGG | - | chr8.1:20185404-20185423 | None:intergenic | 45.0% | |
CATCCTGATCCTACAACTGT+CGG | + | chr8.1:20185867-20185886 | MS.gene059972:CDS | 45.0% | |
CCATTACCATACCCTGATTG+AGG | - | chr8.1:20185903-20185922 | None:intergenic | 45.0% | |
CCCCAAACTTCTGATTGGAA+TGG | + | chr8.1:20186041-20186060 | MS.gene059972:CDS | 45.0% | |
CCTCAATCAGGGTATGGTAA+TGG | + | chr8.1:20185900-20185919 | MS.gene059972:CDS | 45.0% | |
CCTTGCAACCTTAGTGACAA+GGG | + | chr8.1:20186496-20186515 | MS.gene059972:CDS | 45.0% | |
GACTACAAATGCAGGCTGTT+AGG | + | chr8.1:20184896-20184915 | MS.gene059972:intron | 45.0% | |
GAGGATCTGATCCTCAATCA+GGG | + | chr8.1:20185889-20185908 | MS.gene059972:CDS | 45.0% | |
GATGCTGATGATTGGGGTTA+TGG | + | chr8.1:20183871-20183890 | MS.gene059972:CDS | 45.0% | |
GCTGAATATGGGGATGGTTA+TGG | + | chr8.1:20183925-20183944 | MS.gene059972:CDS | 45.0% | |
GGTAGAGATGCTGATGATTG+GGG | + | chr8.1:20183865-20183884 | MS.gene059972:CDS | 45.0% | |
GGTGGAGAATGATGATCAAC+TGG | - | chr8.1:20183412-20183431 | None:intergenic | 45.0% | |
GTAGGCATCAATGGAGCAAA+AGG | - | chr8.1:20186002-20186021 | None:intergenic | 45.0% | |
GTGGTAGAGATGCTGATGAT+TGG | + | chr8.1:20183863-20183882 | MS.gene059972:CDS | 45.0% | |
GTTTGATTGAGATCTGACGG+TGG | - | chr8.1:20183430-20183449 | None:intergenic | 45.0% | |
TAAACCTTGCACACAGTCAC+GGG | - | chr8.1:20185097-20185116 | None:intergenic | 45.0% | |
TATGGGGATGGTTATGGTGA+CGG | + | chr8.1:20183931-20183950 | MS.gene059972:CDS | 45.0% | |
TCCTTGCAACCTTAGTGACA+AGG | + | chr8.1:20186495-20186514 | MS.gene059972:CDS | 45.0% | |
TCTGATCCTCAATCAGGGTA+TGG | + | chr8.1:20185894-20185913 | MS.gene059972:CDS | 45.0% | |
TGATGGAGACAGCAAAGGTT+GGG | + | chr8.1:20183798-20183817 | MS.gene059972:CDS | 45.0% | |
TGCAAACTCAGCTAATGCTC+AGG | + | chr8.1:20186868-20186887 | MS.gene059972:CDS | 45.0% | |
TGCTCGCACTATAGTCGTTA+TGG | + | chr8.1:20186758-20186777 | MS.gene059972:CDS | 45.0% | |
TGTGGAGCTTCATGAGAAGT+TGG | + | chr8.1:20183477-20183496 | MS.gene059972:CDS | 45.0% | |
TTGAACCTCAGAACCCAGTT+GGG | - | chr8.1:20183380-20183399 | None:intergenic | 45.0% | |
TTGATGGAGACAGCAAAGGT+TGG | + | chr8.1:20183797-20183816 | MS.gene059972:CDS | 45.0% | |
TTGCAACCCGATTCTTTGGA+TGG | - | chr8.1:20186468-20186487 | None:intergenic | 45.0% | |
TTGCTCCCCAAACTTCTGAT+TGG | + | chr8.1:20186036-20186055 | MS.gene059972:CDS | 45.0% | |
TTGTCACTAAGGTTGCAAGG+AGG | - | chr8.1:20186496-20186515 | None:intergenic | 45.0% | |
! | AAACTGCATTCAGGTTCACC+AGG | - | chr8.1:20186397-20186416 | None:intergenic | 45.0% |
! | AATCCTTGCCAGATGGCTTT+TGG | - | chr8.1:20186094-20186113 | None:intergenic | 45.0% |
! | GAACGAGTTGGAGATGAAAG+GGG | + | chr8.1:20183628-20183647 | MS.gene059972:CDS | 45.0% |
! | GATGTTGATGGAGACAGCAA+AGG | + | chr8.1:20183793-20183812 | MS.gene059972:CDS | 45.0% |
! | GCTGGTTATGGTGCTGAATA+TGG | + | chr8.1:20183913-20183932 | MS.gene059972:CDS | 45.0% |
! | GTGAACGAGTTGGAGATGAA+AGG | + | chr8.1:20183626-20183645 | MS.gene059972:CDS | 45.0% |
! | TATGGTGCTGAATATGGGGA+TGG | + | chr8.1:20183919-20183938 | MS.gene059972:CDS | 45.0% |
!! | CAAACGGCATCTGCTTTTGA+TGG | - | chr8.1:20186357-20186376 | None:intergenic | 45.0% |
!! | CAAAGGGTATTTGGGGCAAA+AGG | - | chr8.1:20184254-20184273 | None:intergenic | 45.0% |
!! | CAATCAGGGTATGGTAATGG+AGG | + | chr8.1:20185903-20185922 | MS.gene059972:CDS | 45.0% |
!! | GATGGTTATGGTGACGGTTA+TGG | + | chr8.1:20183937-20183956 | MS.gene059972:CDS | 45.0% |
!! | TATGGTGACGGTTATGGCTA+TGG | + | chr8.1:20183943-20183962 | MS.gene059972:CDS | 45.0% |
!! | TTTGATGATGGCGAACGAGT+TGG | + | chr8.1:20183679-20183698 | MS.gene059972:CDS | 45.0% |
AAACCTTGCACACAGTCACG+GGG | - | chr8.1:20185096-20185115 | None:intergenic | 50.0% | |
AATGCAGGCTGTTAGGGAGA+AGG | + | chr8.1:20184903-20184922 | MS.gene059972:intron | 50.0% | |
AGAACCCAGTTGGGGTTCTT+CGG | - | chr8.1:20183371-20183390 | None:intergenic | 50.0% | |
AGAGCCAGTGCGCATGTAAT+AGG | - | chr8.1:20185817-20185836 | None:intergenic | 50.0% | |
AGCCAGTGCGCATGTAATAG+GGG | - | chr8.1:20185815-20185834 | None:intergenic | 50.0% | |
AGGTCTGGAGGCTGTAAGTT+TGG | + | chr8.1:20185597-20185616 | MS.gene059972:CDS | 50.0% | |
ATGGCGTAAGGACTTCGCTA+GGG | + | chr8.1:20184716-20184735 | MS.gene059972:intron | 50.0% | |
CACCTGCCTACTTATCAGAG+AGG | + | chr8.1:20186266-20186285 | MS.gene059972:CDS | 50.0% | |
CCCTTGTCACTAAGGTTGCA+AGG | - | chr8.1:20186499-20186518 | None:intergenic | 50.0% | |
CTTCAGCTTCAGGCCTCAAA+GGG | - | chr8.1:20184011-20184030 | None:intergenic | 50.0% | |
GAAGAACCAGAAGAGAACGC+GGG | + | chr8.1:20184937-20184956 | MS.gene059972:CDS | 50.0% | |
GAGCCAGTGCGCATGTAATA+GGG | - | chr8.1:20185816-20185835 | None:intergenic | 50.0% | |
GATGATTGGGGTTATGGTGG+TGG | + | chr8.1:20183877-20183896 | MS.gene059972:CDS | 50.0% | |
GCTGATGATTGGGGTTATGG+TGG | + | chr8.1:20183874-20183893 | MS.gene059972:CDS | 50.0% | |
GGAGGATCTGATCCTCAATC+AGG | + | chr8.1:20185888-20185907 | MS.gene059972:CDS | 50.0% | |
GGCATTGCGATTTGCAAGCT+TGG | - | chr8.1:20184596-20184615 | None:intergenic | 50.0% | |
GGGTGGTCAAATCTACAAGC+TGG | - | chr8.1:20186800-20186819 | None:intergenic | 50.0% | |
GTTGAACCTCAGAACCCAGT+TGG | - | chr8.1:20183381-20183400 | None:intergenic | 50.0% | |
TAGGATTGTTGTCCGAGTCC+AGG | - | chr8.1:20186848-20186867 | None:intergenic | 50.0% | |
TATAGTGCGAGCAGACACTC+TGG | - | chr8.1:20186751-20186770 | None:intergenic | 50.0% | |
TATGGCGTAAGGACTTCGCT+AGG | + | chr8.1:20184715-20184734 | MS.gene059972:intron | 50.0% | |
TCAGATCCTCCGACAGTTGT+AGG | - | chr8.1:20185879-20185898 | None:intergenic | 50.0% | |
TCCGAGTCCAGGCATCATTA+GGG | - | chr8.1:20186837-20186856 | None:intergenic | 50.0% | |
TCTCGGCTTACCTATTCGTC+TGG | + | chr8.1:20185680-20185699 | MS.gene059972:CDS | 50.0% | |
TCTTCAGCTTCAGGCCTCAA+AGG | - | chr8.1:20184012-20184031 | None:intergenic | 50.0% | |
TGAACCTCAGAACCCAGTTG+GGG | - | chr8.1:20183379-20183398 | None:intergenic | 50.0% | |
TGAGTAGGCGTAGGCATCAA+TGG | - | chr8.1:20186011-20186030 | None:intergenic | 50.0% | |
TGTACATGAGCCACGAACAG+AGG | + | chr8.1:20185391-20185410 | MS.gene059972:intron | 50.0% | |
TTGATGCCTACGCCTACTCA+AGG | + | chr8.1:20186011-20186030 | MS.gene059972:CDS | 50.0% | |
TTGTAGTACCAAGGGGACCT+GGG | + | chr8.1:20185236-20185255 | MS.gene059972:intron | 50.0% | |
! | ATTAGGGGAAGTGCGCTTTC+TGG | - | chr8.1:20186821-20186840 | None:intergenic | 50.0% |
! | GAAGTGTTTCCAGAAAGGCC+TGG | + | chr8.1:20186376-20186395 | MS.gene059972:CDS | 50.0% |
! | GTGAATGAAGAGCTTGGTGG+TGG | + | chr8.1:20183844-20183863 | MS.gene059972:CDS | 50.0% |
! | TTAGGGGAAGTGCGCTTTCT+GGG | - | chr8.1:20186820-20186839 | None:intergenic | 50.0% |
!! | CGCACTGGCTCTTGTAAGTT+TGG | + | chr8.1:20185825-20185844 | MS.gene059972:CDS | 50.0% |
AACGCCGAAGAACCCCAACT+GGG | + | chr8.1:20183364-20183383 | MS.gene059972:CDS | 55.0% | |
AAGGCAGGCCCTTGTCACTA+AGG | - | chr8.1:20186507-20186526 | None:intergenic | 55.0% | |
AATGCTCAGGTGGCTGGGAT+GGG | + | chr8.1:20186881-20186900 | MS.gene059972:CDS | 55.0% | |
AGAACCCCAACTGGGTTCTG+AGG | + | chr8.1:20183372-20183391 | MS.gene059972:CDS | 55.0% | |
CACAACAACCTGTCGCCTCA+TGG | + | chr8.1:20185949-20185968 | MS.gene059972:CDS | 55.0% | |
CAGCTAATGCTCAGGTGGCT+GGG | + | chr8.1:20186876-20186895 | MS.gene059972:CDS | 55.0% | |
CCCCTAATGATGCCTGGACT+CGG | + | chr8.1:20186833-20186852 | MS.gene059972:CDS | 55.0% | |
CCGAGTCCAGGCATCATTAG+GGG | - | chr8.1:20186836-20186855 | None:intergenic | 55.0% | |
CCTCCGACAGTTGTAGGATC+AGG | - | chr8.1:20185873-20185892 | None:intergenic | 55.0% | |
CCTGATCCTACAACTGTCGG+AGG | + | chr8.1:20185870-20185889 | MS.gene059972:CDS | 55.0% | |
CTCTTTAACCCAGGTCCCCT+TGG | - | chr8.1:20185247-20185266 | None:intergenic | 55.0% | |
CTTGTAGTACCAAGGGGACC+TGG | + | chr8.1:20185235-20185254 | MS.gene059972:intron | 55.0% | |
GAAGAAGACCATGAGGCGAC+AGG | - | chr8.1:20185960-20185979 | None:intergenic | 55.0% | |
GCAAGTCCTTGAGTAGGCGT+AGG | - | chr8.1:20186020-20186039 | None:intergenic | 55.0% | |
GCACTTCCCCTAATGATGCC+TGG | + | chr8.1:20186827-20186846 | MS.gene059972:CDS | 55.0% | |
GGGGACCTGGGTTAAAGAGT+AGG | + | chr8.1:20185248-20185267 | MS.gene059972:intron | 55.0% | |
GTCCGAGTCCAGGCATCATT+AGG | - | chr8.1:20186838-20186857 | None:intergenic | 55.0% | |
GTGCTGTGAACCCTCTTGAG+TGG | - | chr8.1:20185641-20185660 | None:intergenic | 55.0% | |
TAATGCTCAGGTGGCTGGGA+TGG | + | chr8.1:20186880-20186899 | MS.gene059972:CDS | 55.0% | |
TCAGCTAATGCTCAGGTGGC+TGG | + | chr8.1:20186875-20186894 | MS.gene059972:CDS | 55.0% | |
TCAGGTTCACCAGGCCTTTC+TGG | - | chr8.1:20186388-20186407 | None:intergenic | 55.0% | |
TGCCCCTATTACATGCGCAC+TGG | + | chr8.1:20185810-20185829 | MS.gene059972:CDS | 55.0% | |
TGGGGAGCAAGTCCTTGAGT+AGG | - | chr8.1:20186026-20186045 | None:intergenic | 55.0% | |
!! | GATGGTGGTGGTGCTGGTTA+TGG | + | chr8.1:20183901-20183920 | MS.gene059972:CDS | 55.0% |
!! | GGTTATGGTGGTGGTGATGG+TGG | + | chr8.1:20183886-20183905 | MS.gene059972:CDS | 55.0% |
!! | TATGGTGGTGGTGATGGTGG+TGG | + | chr8.1:20183889-20183908 | MS.gene059972:CDS | 55.0% |
!! | TGGGGTTATGGTGGTGGTGA+TGG | + | chr8.1:20183883-20183902 | MS.gene059972:CDS | 55.0% |
CAACGCCGAAGAACCCCAAC+TGG | + | chr8.1:20183363-20183382 | MS.gene059972:CDS | 60.0% | |
CAGTTGGGGTTCTTCGGCGT+TGG | - | chr8.1:20183365-20183384 | None:intergenic | 60.0% | |
GGAGGGTCCGTTTCACTACG+AGG | + | chr8.1:20185921-20185940 | MS.gene059972:CDS | 60.0% | |
GTTCCCCGTGACTGTGTGCA+AGG | + | chr8.1:20185090-20185109 | MS.gene059972:intron | 60.0% | |
CGCGGGCCAGACAGAATGCA+AGG | + | chr8.1:20184954-20184973 | MS.gene059972:CDS | 65.0% | |
GCGAGCAGACACTCTGGTCC+TGG | - | chr8.1:20186745-20186764 | None:intergenic | 65.0% | |
GTCTGGCCCGCGTTCTCTTC+TGG | - | chr8.1:20184946-20184965 | None:intergenic | 65.0% | |
! | GGGGAAGTGCGCTTTCTGGG+TGG | - | chr8.1:20186817-20186836 | None:intergenic | 65.0% |
!! | GGTGGTGATGGTGGTGGTGC+TGG | + | chr8.1:20183895-20183914 | MS.gene059972:CDS | 65.0% |
GCTCAGGTGGCTGGGATGGG+TGG | + | chr8.1:20186884-20186903 | MS.gene059972:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 20183322 | 20186943 | 20183322 | ID=MS.gene059972 |
chr8.1 | mRNA | 20183322 | 20186943 | 20183322 | ID=MS.gene059972.t1;Parent=MS.gene059972 |
chr8.1 | exon | 20183322 | 20184119 | 20183322 | ID=MS.gene059972.t1.exon1;Parent=MS.gene059972.t1 |
chr8.1 | CDS | 20183322 | 20184119 | 20183322 | ID=cds.MS.gene059972.t1;Parent=MS.gene059972.t1 |
chr8.1 | exon | 20184910 | 20184975 | 20184910 | ID=MS.gene059972.t1.exon2;Parent=MS.gene059972.t1 |
chr8.1 | CDS | 20184910 | 20184975 | 20184910 | ID=cds.MS.gene059972.t1;Parent=MS.gene059972.t1 |
chr8.1 | exon | 20185588 | 20185701 | 20185588 | ID=MS.gene059972.t1.exon3;Parent=MS.gene059972.t1 |
chr8.1 | CDS | 20185588 | 20185701 | 20185588 | ID=cds.MS.gene059972.t1;Parent=MS.gene059972.t1 |
chr8.1 | exon | 20185798 | 20186070 | 20185798 | ID=MS.gene059972.t1.exon4;Parent=MS.gene059972.t1 |
chr8.1 | CDS | 20185798 | 20186070 | 20185798 | ID=cds.MS.gene059972.t1;Parent=MS.gene059972.t1 |
chr8.1 | exon | 20186265 | 20186534 | 20186265 | ID=MS.gene059972.t1.exon5;Parent=MS.gene059972.t1 |
chr8.1 | CDS | 20186265 | 20186534 | 20186265 | ID=cds.MS.gene059972.t1;Parent=MS.gene059972.t1 |
chr8.1 | exon | 20186746 | 20186943 | 20186746 | ID=MS.gene059972.t1.exon6;Parent=MS.gene059972.t1 |
chr8.1 | CDS | 20186746 | 20186943 | 20186746 | ID=cds.MS.gene059972.t1;Parent=MS.gene059972.t1 |
Gene Sequence |
Protein sequence |