Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060062.t1 | AES73226.1 | 80.2 | 374 | 58 | 2 | 1 | 358 | 56 | 429 | 3.00E-160 | 574.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060062.t1 | Q9S7T8 | 53.9 | 360 | 162 | 2 | 1 | 356 | 31 | 390 | 1.5e-107 | 391.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060062.t1 | G7J5R0 | 80.2 | 374 | 58 | 2 | 1 | 358 | 56 | 429 | 2.1e-160 | 574.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene065945 | MS.gene060062 | PPI |
| MS.gene060062 | MS.gene045585 | PPI |
| MS.gene060062 | MS.gene065944 | PPI |
| MS.gene006610 | MS.gene060062 | PPI |
| MS.gene031697 | MS.gene060062 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060062.t1 | MTR_3g101030 | 80.214 | 374 | 58 | 2 | 1 | 358 | 56 | 429 | 0.0 | 596 |
| MS.gene060062.t1 | MTR_3g101010 | 81.389 | 360 | 65 | 1 | 1 | 358 | 30 | 389 | 0.0 | 568 |
| MS.gene060062.t1 | MTR_3g101050 | 77.500 | 360 | 60 | 6 | 1 | 357 | 56 | 397 | 0.0 | 528 |
| MS.gene060062.t1 | MTR_3g018740 | 70.195 | 359 | 102 | 2 | 1 | 356 | 30 | 386 | 3.21e-176 | 494 |
| MS.gene060062.t1 | MTR_8g027395 | 68.611 | 360 | 107 | 2 | 1 | 358 | 42 | 397 | 5.90e-175 | 492 |
| MS.gene060062.t1 | MTR_4g045707 | 68.889 | 360 | 108 | 3 | 1 | 358 | 31 | 388 | 2.49e-172 | 485 |
| MS.gene060062.t1 | MTR_4g088525 | 66.017 | 359 | 116 | 2 | 1 | 357 | 14 | 368 | 1.16e-166 | 469 |
| MS.gene060062.t1 | MTR_8g461160 | 66.944 | 360 | 115 | 2 | 1 | 356 | 33 | 392 | 2.23e-166 | 470 |
| MS.gene060062.t1 | MTR_8g027420 | 66.389 | 360 | 104 | 4 | 1 | 358 | 31 | 375 | 6.55e-165 | 466 |
| MS.gene060062.t1 | MTR_3g101180 | 65.301 | 366 | 117 | 3 | 1 | 356 | 33 | 398 | 2.18e-162 | 460 |
| MS.gene060062.t1 | MTR_7g451890 | 63.536 | 362 | 128 | 2 | 1 | 358 | 41 | 402 | 1.39e-159 | 453 |
| MS.gene060062.t1 | MTR_3g048000 | 63.788 | 359 | 107 | 4 | 1 | 356 | 52 | 390 | 2.14e-159 | 452 |
| MS.gene060062.t1 | MTR_2g046030 | 64.641 | 362 | 117 | 4 | 1 | 356 | 30 | 386 | 7.01e-158 | 448 |
| MS.gene060062.t1 | MTR_2g045980 | 64.365 | 362 | 118 | 4 | 1 | 356 | 30 | 386 | 5.35e-157 | 446 |
| MS.gene060062.t1 | MTR_7g047780 | 63.812 | 362 | 127 | 2 | 1 | 358 | 41 | 402 | 1.08e-156 | 446 |
| MS.gene060062.t1 | MTR_7g050810 | 62.295 | 366 | 126 | 3 | 1 | 358 | 43 | 404 | 2.87e-156 | 445 |
| MS.gene060062.t1 | MTR_4g088535 | 64.789 | 355 | 103 | 4 | 1 | 353 | 32 | 366 | 1.95e-154 | 439 |
| MS.gene060062.t1 | MTR_3g101130 | 61.838 | 359 | 134 | 2 | 1 | 358 | 33 | 389 | 2.76e-154 | 439 |
| MS.gene060062.t1 | MTR_7g050750 | 62.155 | 362 | 133 | 2 | 1 | 358 | 35 | 396 | 8.11e-154 | 438 |
| MS.gene060062.t1 | MTR_3g015620 | 60.665 | 361 | 114 | 5 | 1 | 356 | 41 | 378 | 5.04e-142 | 407 |
| MS.gene060062.t1 | MTR_3g100995 | 75.294 | 255 | 62 | 1 | 104 | 358 | 11 | 264 | 8.58e-140 | 397 |
| MS.gene060062.t1 | MTR_3g102920 | 58.889 | 360 | 108 | 4 | 1 | 356 | 85 | 408 | 9.58e-133 | 385 |
| MS.gene060062.t1 | MTR_3g101200 | 56.425 | 358 | 131 | 4 | 1 | 356 | 56 | 390 | 1.14e-124 | 364 |
| MS.gene060062.t1 | MTR_3g101190 | 53.889 | 360 | 101 | 3 | 1 | 358 | 16 | 312 | 1.17e-122 | 356 |
| MS.gene060062.t1 | MTR_3g018747 | 68.846 | 260 | 63 | 3 | 100 | 356 | 9 | 253 | 4.80e-122 | 352 |
| MS.gene060062.t1 | MTR_3g100010 | 58.491 | 318 | 84 | 2 | 1 | 285 | 42 | 344 | 3.99e-117 | 343 |
| MS.gene060062.t1 | MTR_7g050830 | 55.749 | 287 | 96 | 2 | 1 | 267 | 43 | 318 | 4.31e-104 | 309 |
| MS.gene060062.t1 | MTR_3g015760 | 60.073 | 273 | 107 | 2 | 85 | 356 | 8 | 279 | 7.82e-100 | 296 |
| MS.gene060062.t1 | MTR_3g111160 | 68.571 | 210 | 61 | 2 | 152 | 358 | 13 | 220 | 1.04e-91 | 274 |
| MS.gene060062.t1 | MTR_3g101110 | 60.251 | 239 | 63 | 4 | 100 | 332 | 68 | 280 | 1.92e-87 | 265 |
| MS.gene060062.t1 | MTR_3g100520 | 60.811 | 222 | 70 | 3 | 141 | 358 | 1 | 209 | 2.23e-87 | 262 |
| MS.gene060062.t1 | MTR_3g099970 | 66.667 | 195 | 48 | 2 | 100 | 293 | 20 | 198 | 6.45e-85 | 256 |
| MS.gene060062.t1 | MTR_3g114310 | 42.933 | 375 | 192 | 11 | 1 | 358 | 41 | 410 | 7.61e-84 | 261 |
| MS.gene060062.t1 | MTR_2g046410 | 64.532 | 203 | 64 | 3 | 160 | 356 | 147 | 347 | 1.17e-80 | 250 |
| MS.gene060062.t1 | MTR_3g101020 | 66.486 | 185 | 37 | 2 | 174 | 358 | 1 | 160 | 1.92e-77 | 235 |
| MS.gene060062.t1 | MTR_3g101150 | 62.025 | 158 | 54 | 2 | 206 | 357 | 1 | 158 | 1.41e-60 | 192 |
| MS.gene060062.t1 | MTR_3g102870 | 57.764 | 161 | 66 | 1 | 163 | 321 | 1 | 161 | 1.08e-57 | 185 |
| MS.gene060062.t1 | MTR_3g111150 | 58.442 | 154 | 40 | 1 | 1 | 154 | 24 | 153 | 3.85e-54 | 176 |
| MS.gene060062.t1 | MTR_3g100990 | 56.800 | 125 | 53 | 1 | 1 | 125 | 30 | 153 | 9.71e-36 | 136 |
| MS.gene060062.t1 | MTR_4g093550 | 69.492 | 59 | 18 | 0 | 1 | 59 | 31 | 89 | 3.62e-19 | 81.6 |
| MS.gene060062.t1 | MTR_6g046890 | 67.164 | 67 | 19 | 1 | 1 | 67 | 24 | 87 | 2.30e-18 | 80.9 |
| MS.gene060062.t1 | MTR_3g101140 | 61.538 | 65 | 24 | 1 | 295 | 358 | 52 | 116 | 1.85e-16 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060062.t1 | AT1G47710 | 53.889 | 360 | 162 | 2 | 1 | 356 | 31 | 390 | 2.10e-138 | 399 |
| MS.gene060062.t1 | AT1G47710 | 53.889 | 360 | 162 | 2 | 1 | 356 | 58 | 417 | 1.22e-137 | 398 |
| MS.gene060062.t1 | AT3G45220 | 49.454 | 366 | 168 | 5 | 1 | 355 | 31 | 390 | 1.13e-118 | 349 |
| MS.gene060062.t1 | AT2G25240 | 49.030 | 361 | 169 | 6 | 1 | 355 | 31 | 382 | 6.25e-113 | 334 |
| MS.gene060062.t1 | AT2G26390 | 48.077 | 364 | 171 | 6 | 1 | 355 | 32 | 386 | 3.20e-111 | 330 |
| MS.gene060062.t1 | AT1G62170 | 43.094 | 362 | 179 | 4 | 2 | 357 | 93 | 433 | 8.93e-96 | 291 |
| MS.gene060062.t1 | AT2G14540 | 45.983 | 361 | 167 | 5 | 1 | 355 | 59 | 397 | 3.54e-94 | 287 |
| MS.gene060062.t1 | AT2G35580 | 42.458 | 358 | 181 | 7 | 4 | 355 | 33 | 371 | 1.17e-89 | 274 |
| MS.gene060062.t1 | AT1G64030 | 43.767 | 361 | 177 | 6 | 1 | 355 | 31 | 371 | 5.74e-89 | 273 |
| MS.gene060062.t1 | AT1G62170 | 39.494 | 395 | 179 | 5 | 2 | 357 | 93 | 466 | 9.77e-89 | 275 |
| MS.gene060062.t1 | AT1G64010 | 46.759 | 216 | 93 | 4 | 141 | 355 | 1 | 195 | 1.41e-60 | 193 |
| MS.gene060062.t1 | AT1G64010 | 46.766 | 201 | 85 | 4 | 156 | 355 | 2 | 181 | 1.75e-54 | 177 |
| MS.gene060062.t1 | AT1G62160 | 40.110 | 182 | 86 | 4 | 178 | 357 | 60 | 220 | 1.90e-35 | 129 |
| MS.gene060062.t1 | AT1G63280 | 52.174 | 115 | 51 | 2 | 100 | 212 | 8 | 120 | 1.31e-32 | 118 |
| MS.gene060062.t1 | AT1G51330 | 49.550 | 111 | 53 | 2 | 99 | 206 | 30 | 140 | 2.63e-24 | 99.0 |
Find 82 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAATGCGCTGTACTTTAA+AGG | 0.166787 | 7.4:-72365753 | MS.gene060062:CDS |
| TGACCAATGAAGTGAATTTA+TGG | 0.210594 | 7.4:-72365854 | MS.gene060062:CDS |
| TTATCTTCACCTTGCTTATA+AGG | 0.268250 | 7.4:+72365585 | None:intergenic |
| CAATGGAGGTCTTACTAAAA+TGG | 0.273021 | 7.4:-72365349 | MS.gene060062:CDS |
| CCAAAGTTCAATATTTCATT+TGG | 0.296966 | 7.4:-72365423 | MS.gene060062:CDS |
| CAGGTGCTCAATCCTCTTGC+TGG | 0.306550 | 7.4:-72365114 | MS.gene060062:CDS |
| GTTGAGTTGATCGGTGGATT+TGG | 0.319346 | 7.4:+72366211 | None:intergenic |
| CAAATGAAATATTGAACTTT+GGG | 0.323605 | 7.4:+72365424 | None:intergenic |
| GCCAACTTTGCTTGAGAAGC+TGG | 0.324647 | 7.4:-72365514 | MS.gene060062:CDS |
| ACTGAAACAATCATCTTTGT+TGG | 0.329190 | 7.4:-72365138 | MS.gene060062:CDS |
| GGCTTCCGAATCTGAGTTAC+TGG | 0.338294 | 7.4:-72365493 | MS.gene060062:CDS |
| AGCCCATAAATTCACTTCAT+TGG | 0.342189 | 7.4:+72365851 | None:intergenic |
| TATCTTTCGTCGATGGTGTA+TGG | 0.345495 | 7.4:-72366124 | MS.gene060062:CDS |
| AAGTGGAAGTAGGTGACTTT+AGG | 0.367192 | 7.4:-72365449 | MS.gene060062:CDS |
| TTCCTTCCAAATGCAAAAGA+TGG | 0.367541 | 7.4:-72365540 | MS.gene060062:CDS |
| CCAAATGAAATATTGAACTT+TGG | 0.376715 | 7.4:+72365423 | None:intergenic |
| TGCGGTGGCTGCAACAGCTT+CGG | 0.384988 | 7.4:+72365254 | None:intergenic |
| ATTCAAAAGGTGAAAATCAT+AGG | 0.391490 | 7.4:+72365692 | None:intergenic |
| GAAAGAAGGTTGAAGAGAAA+GGG | 0.417612 | 7.4:+72366091 | None:intergenic |
| TGAAAGAAGGTTGAAGAGAA+AGG | 0.419511 | 7.4:+72366090 | None:intergenic |
| GACACAATTCCTTTGAAAGA+AGG | 0.426001 | 7.4:+72366077 | None:intergenic |
| ATTAAAGAACTTCTTCCTCT+AGG | 0.427888 | 7.4:-72365807 | MS.gene060062:CDS |
| TTTGAATGGAAACTCAGTTA+AGG | 0.440673 | 7.4:-72365676 | MS.gene060062:CDS |
| TAACTGAGTTTCCATTCAAA+AGG | 0.441115 | 7.4:+72365679 | None:intergenic |
| AACAATCATCTTTGTTGGAC+AGG | 0.442686 | 7.4:-72365133 | MS.gene060062:CDS |
| TCTCTAATCATAAACAAGAA+AGG | 0.443816 | 7.4:+72365168 | None:intergenic |
| TTAAAGAACTTCTTCCTCTA+GGG | 0.444956 | 7.4:-72365806 | MS.gene060062:CDS |
| CAAGCTTCCTCTTGATAAAG+TGG | 0.447424 | 7.4:-72365466 | MS.gene060062:CDS |
| TTTATTGACGTAAATGAAGA+AGG | 0.449783 | 7.4:-72365279 | MS.gene060062:CDS |
| CTCTAATCATAAACAAGAAA+GGG | 0.468439 | 7.4:+72365169 | None:intergenic |
| ATCATCGCTGCTGGCTCCGA+GGG | 0.472440 | 7.4:-72366269 | MS.gene060062:CDS |
| TCTCTTCAACCTTCTTTCAA+AGG | 0.474212 | 7.4:-72366086 | MS.gene060062:CDS |
| GTGTTCCAGTAACTCAGATT+CGG | 0.474362 | 7.4:+72365488 | None:intergenic |
| TCCTTCCAAATGCAAAAGAT+GGG | 0.485174 | 7.4:-72365539 | MS.gene060062:CDS |
| GCCAGCTTCTCAAGCAAAGT+TGG | 0.489801 | 7.4:+72365513 | None:intergenic |
| ATCTTTCGTCGATGGTGTAT+GGG | 0.491547 | 7.4:-72366123 | MS.gene060062:CDS |
| GATAGATGAGGCCCGCCTGC+GGG | 0.493469 | 7.4:+72366143 | None:intergenic |
| GTGCTAAGCATCATCGCTGC+TGG | 0.494658 | 7.4:-72366278 | MS.gene060062:CDS |
| TTGAGAAGTTGTTGTTGTGT+GGG | 0.494908 | 7.4:+72366245 | None:intergenic |
| GACCAATGAAGTGAATTTAT+GGG | 0.495263 | 7.4:-72365853 | MS.gene060062:CDS |
| GTTGATCGGTGGATTTGGAT+TGG | 0.496620 | 7.4:+72366216 | None:intergenic |
| CTTCACCTTGCTTATAAGGA+AGG | 0.497179 | 7.4:+72365589 | None:intergenic |
| AGGTGCTCAATCCTCTTGCT+GGG | 0.503743 | 7.4:-72365113 | MS.gene060062:CDS |
| TTGTTGTTGTGTGGGGCCCT+CGG | 0.506763 | 7.4:+72366253 | None:intergenic |
| GTTGAGAAGTTGTTGTTGTG+TGG | 0.516014 | 7.4:+72366244 | None:intergenic |
| TGCAGTCACTAGCAGTGGCA+TGG | 0.521843 | 7.4:-72365226 | MS.gene060062:CDS |
| GCTACAAAGTCTAGTCGAGT+TGG | 0.522053 | 7.4:+72365198 | None:intergenic |
| AGCACAACTTGTAGTGAAAG+TGG | 0.525473 | 7.4:+72366296 | None:intergenic |
| GCAGTCACTAGCAGTGGCAT+GGG | 0.532869 | 7.4:-72365225 | MS.gene060062:CDS |
| CTTGGCCTTCCTTATAAGCA+AGG | 0.532934 | 7.4:-72365594 | MS.gene060062:CDS |
| CATCATCGCTGCTGGCTCCG+AGG | 0.533411 | 7.4:-72366270 | MS.gene060062:CDS |
| CGCTGTACTTTAAAGGAGAG+TGG | 0.534492 | 7.4:-72365746 | MS.gene060062:CDS |
| GATCGGTGGATTTGGATTGG+AGG | 0.535140 | 7.4:+72366219 | None:intergenic |
| AATGACGGAGACGAGGATAG+AGG | 0.536198 | 7.4:+72366181 | None:intergenic |
| GGAGACGAGGATAGAGGCGA+AGG | 0.536431 | 7.4:+72366187 | None:intergenic |
| TCTGATATGCTGAAGGAGCT+AGG | 0.542423 | 7.4:-72365390 | MS.gene060062:CDS |
| AAAACGGTGCTCCCGCAGGC+GGG | 0.550168 | 7.4:-72366154 | MS.gene060062:CDS |
| CTACAAAACGGTGCTCCCGC+AGG | 0.550410 | 7.4:-72366158 | MS.gene060062:CDS |
| CCTACTTCCACTTTATCAAG+AGG | 0.564451 | 7.4:+72365459 | None:intergenic |
| CCTCATCTATCTTTCGTCGA+TGG | 0.565945 | 7.4:-72366131 | MS.gene060062:CDS |
| CCTCTTGATAAAGTGGAAGT+AGG | 0.566916 | 7.4:-72365459 | MS.gene060062:CDS |
| TTCTGTCGATTTCAAGAACA+AGG | 0.572001 | 7.4:-72366030 | MS.gene060062:intron |
| GTCTCCGTCATTCTACAAAA+CGG | 0.572969 | 7.4:-72366170 | MS.gene060062:CDS |
| TGAGAAGTTGTTGTTGTGTG+GGG | 0.577961 | 7.4:+72366246 | None:intergenic |
| GTAAGACCTCCATTGGTGAA+AGG | 0.579413 | 7.4:+72365357 | None:intergenic |
| CACTAAAATCACCCAGCAAG+AGG | 0.587700 | 7.4:+72365102 | None:intergenic |
| CAAAACGGTGCTCCCGCAGG+CGG | 0.589050 | 7.4:-72366155 | MS.gene060062:CDS |
| TTTGTAGAATGACGGAGACG+AGG | 0.590002 | 7.4:+72366174 | None:intergenic |
| GGCGAAGGAGTTGAGTTGAT+CGG | 0.602516 | 7.4:+72366202 | None:intergenic |
| TGAAACTTCTGATATGCTGA+AGG | 0.602682 | 7.4:-72365397 | MS.gene060062:CDS |
| AGATAGATGAGGCCCGCCTG+CGG | 0.604970 | 7.4:+72366142 | None:intergenic |
| AGAACTTCTTCCTCTAGGGT+CGG | 0.613652 | 7.4:-72365802 | MS.gene060062:CDS |
| TTTCGTCGATGGTGTATGGG+TGG | 0.629419 | 7.4:-72366120 | MS.gene060062:CDS |
| TGGGCTGAAAGAGAGACAAA+CGG | 0.636800 | 7.4:-72365834 | MS.gene060062:CDS |
| AGTGACTGCATCAGATGCGG+TGG | 0.649976 | 7.4:+72365239 | None:intergenic |
| TCTGATGCAGTCACTAGCAG+TGG | 0.651539 | 7.4:-72365231 | MS.gene060062:CDS |
| GGTCGGTCGACAACTTAACT+CGG | 0.659941 | 7.4:-72365785 | MS.gene060062:CDS |
| GAAGGAGTTGAGTTGATCGG+TGG | 0.668064 | 7.4:+72366205 | None:intergenic |
| GCTAGTGACTGCATCAGATG+CGG | 0.677841 | 7.4:+72365236 | None:intergenic |
| TATGCTGAAGGAGCTAGGCG+TGG | 0.693931 | 7.4:-72365385 | MS.gene060062:CDS |
| CCATCGACGAAAGATAGATG+AGG | 0.714591 | 7.4:+72366131 | None:intergenic |
| AAGTTGTCGACCGACCCTAG+AGG | 0.749625 | 7.4:+72365792 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGATTTTAAATTTTGATA+TGG | - | chr7.4:72365523-72365542 | MS.gene060062:CDS | 10.0% |
| !! | TACAAAAATTTAACAAAATC+AGG | + | chr7.4:72365462-72365481 | None:intergenic | 15.0% |
| !! | CAAATGAAATATTGAACTTT+GGG | + | chr7.4:72365997-72366016 | None:intergenic | 20.0% |
| !!! | AAATTTTGATATGGTTTGAA+AGG | - | chr7.4:72365532-72365551 | MS.gene060062:CDS | 20.0% |
| ! | ATTCAAAAGGTGAAAATCAT+AGG | + | chr7.4:72365729-72365748 | None:intergenic | 25.0% |
| ! | CCAAAGTTCAATATTTCATT+TGG | - | chr7.4:72365995-72366014 | MS.gene060062:intron | 25.0% |
| ! | CCAAATGAAATATTGAACTT+TGG | + | chr7.4:72365998-72366017 | None:intergenic | 25.0% |
| ! | CTCTAATCATAAACAAGAAA+GGG | + | chr7.4:72366252-72366271 | None:intergenic | 25.0% |
| ! | TCTCTAATCATAAACAAGAA+AGG | + | chr7.4:72366253-72366272 | None:intergenic | 25.0% |
| ! | TTTATTGACGTAAATGAAGA+AGG | - | chr7.4:72366139-72366158 | MS.gene060062:CDS | 25.0% |
| !! | AAGTATTTTGTAGTGAAAAG+AGG | + | chr7.4:72365431-72365450 | None:intergenic | 25.0% |
| !! | AGTATTTTGTAGTGAAAAGA+GGG | + | chr7.4:72365430-72365449 | None:intergenic | 25.0% |
| !! | TATGATTTTCACCTTTTGAA+TGG | - | chr7.4:72365728-72365747 | MS.gene060062:CDS | 25.0% |
| !!! | GAATGATAATTTTGATGCTT+CGG | - | chr7.4:72365694-72365713 | MS.gene060062:CDS | 25.0% |
| !!! | GAATGATTTTAGAAATGCAT+AGG | + | chr7.4:72366111-72366130 | None:intergenic | 25.0% |
| !!! | TTCGATGATTTTAAAGTTCT+TGG | - | chr7.4:72365806-72365825 | MS.gene060062:CDS | 25.0% |
| ACTGAAACAATCATCTTTGT+TGG | - | chr7.4:72366280-72366299 | MS.gene060062:CDS | 30.0% | |
| ATTAAAGAACTTCTTCCTCT+AGG | - | chr7.4:72365611-72365630 | MS.gene060062:CDS | 30.0% | |
| GACCAATGAAGTGAATTTAT+GGG | - | chr7.4:72365565-72365584 | MS.gene060062:CDS | 30.0% | |
| TAACTGAGTTTCCATTCAAA+AGG | + | chr7.4:72365742-72365761 | None:intergenic | 30.0% | |
| TGACCAATGAAGTGAATTTA+TGG | - | chr7.4:72365564-72365583 | MS.gene060062:CDS | 30.0% | |
| TTAAAGAACTTCTTCCTCTA+GGG | - | chr7.4:72365612-72365631 | MS.gene060062:CDS | 30.0% | |
| TTATCTTCACCTTGCTTATA+AGG | + | chr7.4:72365836-72365855 | None:intergenic | 30.0% | |
| TTTGAATGGAAACTCAGTTA+AGG | - | chr7.4:72365742-72365761 | MS.gene060062:CDS | 30.0% | |
| ! | GTATTTTGTAGTGAAAAGAG+GGG | + | chr7.4:72365429-72365448 | None:intergenic | 30.0% |
| AACAATCATCTTTGTTGGAC+AGG | - | chr7.4:72366285-72366304 | MS.gene060062:CDS | 35.0% | |
| AGCCCATAAATTCACTTCAT+TGG | + | chr7.4:72365570-72365589 | None:intergenic | 35.0% | |
| CAATGGAGGTCTTACTAAAA+TGG | - | chr7.4:72366069-72366088 | MS.gene060062:CDS | 35.0% | |
| GAAAGAAGGTTGAAGAGAAA+GGG | + | chr7.4:72365330-72365349 | None:intergenic | 35.0% | |
| TCCTTCCAAATGCAAAAGAT+GGG | - | chr7.4:72365879-72365898 | MS.gene060062:intron | 35.0% | |
| TCTCTTCAACCTTCTTTCAA+AGG | - | chr7.4:72365332-72365351 | MS.gene060062:CDS | 35.0% | |
| TGAAACTTCTGATATGCTGA+AGG | - | chr7.4:72366021-72366040 | MS.gene060062:intron | 35.0% | |
| TGAAAGAAGGTTGAAGAGAA+AGG | + | chr7.4:72365331-72365350 | None:intergenic | 35.0% | |
| TTCCTTCCAAATGCAAAAGA+TGG | - | chr7.4:72365878-72365897 | MS.gene060062:intron | 35.0% | |
| ! | GACACAATTCCTTTGAAAGA+AGG | + | chr7.4:72365344-72365363 | None:intergenic | 35.0% |
| ! | TTGAGAAGTTGTTGTTGTGT+GGG | + | chr7.4:72365176-72365195 | None:intergenic | 35.0% |
| !! | CATTTTAGTAAGACCTCCAT+TGG | + | chr7.4:72366071-72366090 | None:intergenic | 35.0% |
| !! | TTCTGTCGATTTCAAGAACA+AGG | - | chr7.4:72365388-72365407 | MS.gene060062:CDS | 35.0% |
| AAGTGGAAGTAGGTGACTTT+AGG | - | chr7.4:72365969-72365988 | MS.gene060062:intron | 40.0% | |
| AGCACAACTTGTAGTGAAAG+TGG | + | chr7.4:72365125-72365144 | None:intergenic | 40.0% | |
| ATCTTTCGTCGATGGTGTAT+GGG | - | chr7.4:72365295-72365314 | MS.gene060062:CDS | 40.0% | |
| CAAGCTTCCTCTTGATAAAG+TGG | - | chr7.4:72365952-72365971 | MS.gene060062:intron | 40.0% | |
| CCTACTTCCACTTTATCAAG+AGG | + | chr7.4:72365962-72365981 | None:intergenic | 40.0% | |
| CCTCTTGATAAAGTGGAAGT+AGG | - | chr7.4:72365959-72365978 | MS.gene060062:intron | 40.0% | |
| CTTCACCTTGCTTATAAGGA+AGG | + | chr7.4:72365832-72365851 | None:intergenic | 40.0% | |
| GCTAATGCGCTGTACTTTAA+AGG | - | chr7.4:72365665-72365684 | MS.gene060062:CDS | 40.0% | |
| GTCTCCGTCATTCTACAAAA+CGG | - | chr7.4:72365248-72365267 | MS.gene060062:CDS | 40.0% | |
| GTGTTCCAGTAACTCAGATT+CGG | + | chr7.4:72365933-72365952 | None:intergenic | 40.0% | |
| TATCTTTCGTCGATGGTGTA+TGG | - | chr7.4:72365294-72365313 | MS.gene060062:CDS | 40.0% | |
| ! | AGCACCGTTTTGTAGAATGA+CGG | + | chr7.4:72365255-72365274 | None:intergenic | 40.0% |
| ! | GTTGAGAAGTTGTTGTTGTG+TGG | + | chr7.4:72365177-72365196 | None:intergenic | 40.0% |
| ! | GTTTTACCTTTCACCAATGG+AGG | - | chr7.4:72366055-72366074 | MS.gene060062:CDS | 40.0% |
| ! | TGAGAAGTTGTTGTTGTGTG+GGG | + | chr7.4:72365175-72365194 | None:intergenic | 40.0% |
| !! | GTGGTTTTACCTTTCACCAA+TGG | - | chr7.4:72366052-72366071 | MS.gene060062:CDS | 40.0% |
| CCATCGACGAAAGATAGATG+AGG | + | chr7.4:72365290-72365309 | None:intergenic | 45.0% | |
| CCTCATCTATCTTTCGTCGA+TGG | - | chr7.4:72365287-72365306 | MS.gene060062:CDS | 45.0% | |
| GCTACAAAGTCTAGTCGAGT+TGG | + | chr7.4:72366223-72366242 | None:intergenic | 45.0% | |
| GTAAGACCTCCATTGGTGAA+AGG | + | chr7.4:72366064-72366083 | None:intergenic | 45.0% | |
| TCTGATATGCTGAAGGAGCT+AGG | - | chr7.4:72366028-72366047 | MS.gene060062:intron | 45.0% | |
| TGGGCTGAAAGAGAGACAAA+CGG | - | chr7.4:72365584-72365603 | MS.gene060062:CDS | 45.0% | |
| ! | CGCTGTACTTTAAAGGAGAG+TGG | - | chr7.4:72365672-72365691 | MS.gene060062:CDS | 45.0% |
| ! | CTTGGCCTTCCTTATAAGCA+AGG | - | chr7.4:72365824-72365843 | MS.gene060062:CDS | 45.0% |
| ! | GCCCATCTTTTGCATTTGGA+AGG | + | chr7.4:72365883-72365902 | None:intergenic | 45.0% |
| ! | GTTGATCGGTGGATTTGGAT+TGG | + | chr7.4:72365205-72365224 | None:intergenic | 45.0% |
| ! | TTTGTAGAATGACGGAGACG+AGG | + | chr7.4:72365247-72365266 | None:intergenic | 45.0% |
| !! | AGAACTTCTTCCTCTAGGGT+CGG | - | chr7.4:72365616-72365635 | MS.gene060062:CDS | 45.0% |
| !! | GTTGAGTTGATCGGTGGATT+TGG | + | chr7.4:72365210-72365229 | None:intergenic | 45.0% |
| AGGTGCTCAATCCTCTTGCT+GGG | - | chr7.4:72366305-72366324 | MS.gene060062:CDS | 50.0% | |
| GCCAACTTTGCTTGAGAAGC+TGG | - | chr7.4:72365904-72365923 | MS.gene060062:intron | 50.0% | |
| GCCAGCTTCTCAAGCAAAGT+TGG | + | chr7.4:72365908-72365927 | None:intergenic | 50.0% | |
| GCTAGTGACTGCATCAGATG+CGG | + | chr7.4:72366185-72366204 | None:intergenic | 50.0% | |
| GGCTTCCGAATCTGAGTTAC+TGG | - | chr7.4:72365925-72365944 | MS.gene060062:intron | 50.0% | |
| GGTCGGTCGACAACTTAACT+CGG | - | chr7.4:72365633-72365652 | MS.gene060062:CDS | 50.0% | |
| TCTGATGCAGTCACTAGCAG+TGG | - | chr7.4:72366187-72366206 | MS.gene060062:CDS | 50.0% | |
| TTTCGTCGATGGTGTATGGG+TGG | - | chr7.4:72365298-72365317 | MS.gene060062:CDS | 50.0% | |
| ! | AATGACGGAGACGAGGATAG+AGG | + | chr7.4:72365240-72365259 | None:intergenic | 50.0% |
| ! | GATCGGTGGATTTGGATTGG+AGG | + | chr7.4:72365202-72365221 | None:intergenic | 50.0% |
| ! | GGCAGCCCATCTTTTGCATT+TGG | + | chr7.4:72365887-72365906 | None:intergenic | 50.0% |
| !! | GAAGGAGTTGAGTTGATCGG+TGG | + | chr7.4:72365216-72365235 | None:intergenic | 50.0% |
| !! | GGCGAAGGAGTTGAGTTGAT+CGG | + | chr7.4:72365219-72365238 | None:intergenic | 50.0% |
| AAGTTGTCGACCGACCCTAG+AGG | + | chr7.4:72365629-72365648 | None:intergenic | 55.0% | |
| AGTGACTGCATCAGATGCGG+TGG | + | chr7.4:72366182-72366201 | None:intergenic | 55.0% | |
| CAGGTGCTCAATCCTCTTGC+TGG | - | chr7.4:72366304-72366323 | MS.gene060062:CDS | 55.0% | |
| GCAGTCACTAGCAGTGGCAT+GGG | - | chr7.4:72366193-72366212 | MS.gene060062:CDS | 55.0% | |
| GTGCTAAGCATCATCGCTGC+TGG | - | chr7.4:72365140-72365159 | MS.gene060062:CDS | 55.0% | |
| TATGCTGAAGGAGCTAGGCG+TGG | - | chr7.4:72366033-72366052 | MS.gene060062:CDS | 55.0% | |
| TGCAGTCACTAGCAGTGGCA+TGG | - | chr7.4:72366192-72366211 | MS.gene060062:CDS | 55.0% | |
| ! | TTGTTGTTGTGTGGGGCCCT+CGG | + | chr7.4:72365168-72365187 | None:intergenic | 55.0% |
| AGATAGATGAGGCCCGCCTG+CGG | + | chr7.4:72365279-72365298 | None:intergenic | 60.0% | |
| CTACAAAACGGTGCTCCCGC+AGG | - | chr7.4:72365260-72365279 | MS.gene060062:CDS | 60.0% | |
| GGAGACGAGGATAGAGGCGA+AGG | + | chr7.4:72365234-72365253 | None:intergenic | 60.0% | |
| TGCGGTGGCTGCAACAGCTT+CGG | + | chr7.4:72366167-72366186 | None:intergenic | 60.0% | |
| !! | ATCATCGCTGCTGGCTCCGA+GGG | - | chr7.4:72365149-72365168 | MS.gene060062:CDS | 60.0% |
| AAAACGGTGCTCCCGCAGGC+GGG | - | chr7.4:72365264-72365283 | MS.gene060062:CDS | 65.0% | |
| CAAAACGGTGCTCCCGCAGG+CGG | - | chr7.4:72365263-72365282 | MS.gene060062:CDS | 65.0% | |
| GATAGATGAGGCCCGCCTGC+GGG | + | chr7.4:72365278-72365297 | None:intergenic | 65.0% | |
| !! | CATCATCGCTGCTGGCTCCG+AGG | - | chr7.4:72365148-72365167 | MS.gene060062:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 72365110 | 72366330 | 72365110 | ID=MS.gene060062 |
| chr7.4 | mRNA | 72365110 | 72366330 | 72365110 | ID=MS.gene060062.t1;Parent=MS.gene060062 |
| chr7.4 | exon | 72366031 | 72366330 | 72366031 | ID=MS.gene060062.t1.exon1;Parent=MS.gene060062.t1 |
| chr7.4 | CDS | 72366031 | 72366330 | 72366031 | ID=cds.MS.gene060062.t1;Parent=MS.gene060062.t1 |
| chr7.4 | exon | 72365110 | 72365886 | 72365110 | ID=MS.gene060062.t1.exon2;Parent=MS.gene060062.t1 |
| chr7.4 | CDS | 72365110 | 72365886 | 72365110 | ID=cds.MS.gene060062.t1;Parent=MS.gene060062.t1 |
| Gene Sequence |
| Protein sequence |
