AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060406

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060406.t1 MTR_2g036600 95.238 567 17 1 1 557 1 567 0.0 1127
MS.gene060406.t1 MTR_4g127770 76.281 527 103 3 47 557 534 1054 0.0 843
MS.gene060406.t1 MTR_4g127770 74.312 436 97 2 101 524 102 534 0.0 672
MS.gene060406.t1 MTR_4g127770 67.059 85 24 2 443 524 4 87 2.52e-24 108
MS.gene060406.t1 MTR_2g036600 94.537 421 13 1 147 557 6 426 0.0 827
MS.gene060406.t1 MTR_4g127790 80.523 344 67 0 218 561 26 369 0.0 600
MS.gene060406.t1 MTR_8g007295 36.204 511 271 10 76 557 67 551 1.31e-99 315
MS.gene060406.t1 MTR_8g007295 34.286 420 239 8 76 484 67 460 1.61e-73 243
MS.gene060406.t1 MTR_2g021780 38.583 127 69 2 53 179 27 144 1.26e-18 83.6
MS.gene060406.t1 MTR_2g061670 38.938 113 51 3 484 588 33 135 3.78e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060406.t1 AT3G11710 75.365 548 124 2 20 557 38 584 0.0 829
MS.gene060406.t1 AT3G13490 37.524 517 259 13 76 557 88 575 3.67e-99 315
MS.gene060406.t1 AT4G26870 23.899 477 301 16 107 557 63 503 1.99e-18 89.4
MS.gene060406.t1 AT3G30805 87.879 33 4 0 525 557 71 103 9.66e-15 72.8
MS.gene060406.t1 AT4G33760 26.286 175 126 3 201 373 32 205 2.38e-11 67.0
MS.gene060406.t1 AT4G33760 26.286 175 126 3 201 373 168 341 3.52e-11 66.6

Find 164 sgRNAs with CRISPR-Local

Find 411 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCTGTAAATGATTTAAT+TGG 0.109263 2.1:+53665158 None:intergenic
GCCAAAGGACTCATTATTTC+TGG 0.125485 2.1:+53665789 None:intergenic
ATGAAATTGGGAAACAATTT+AGG 0.153537 2.1:-53667446 MS.gene060406:CDS
CTGAACCGTGTTTATGAAAT+TGG 0.173994 2.1:-53667459 MS.gene060406:CDS
GGATAAGAGAATTACCTTTC+TGG 0.195126 2.1:+53671303 None:intergenic
CCAACTGCTGGTTGGGGTTT+GGG 0.197534 2.1:-53665359 MS.gene060406:intron
ACCAACTGCTGGTTGGGGTT+TGG 0.235019 2.1:-53665360 MS.gene060406:CDS
TCTGGAGAAGCTTGATTTCT+TGG 0.244277 2.1:-53667707 MS.gene060406:CDS
GTCCCAATTAAATCATTTAC+AGG 0.260995 2.1:-53665161 MS.gene060406:CDS
TTCAGCGCTCGTCAAGTCTT+TGG 0.273924 2.1:+53666982 None:intergenic
AGACAGCACCACAAAAGTTT+TGG 0.284056 2.1:+53668829 None:intergenic
GCAGAGAATTTGTGTGGATA+TGG 0.310269 2.1:+53670311 None:intergenic
AACAAACGCGCAGTTGTTTC+AGG 0.313133 2.1:+53666905 None:intergenic
TGATGATGGTTTCAAGGTTC+AGG 0.319939 2.1:-53670050 MS.gene060406:CDS
AGTGTATGCTTCGGGATTCC+TGG 0.320278 2.1:+53668730 None:intergenic
TTTGCCACCAACTGCTGGTT+GGG 0.328326 2.1:-53665366 MS.gene060406:CDS
CCCGCGGCGGGAGCGGTGAC+CGG 0.332532 2.1:+53671525 None:intergenic
CACGACATCTTGAGGTTTCA+TGG 0.333865 2.1:+53665183 None:intergenic
CAAGGACTACAATGACTTAA+TGG 0.333941 2.1:-53667361 MS.gene060406:CDS
TGGTTTCAAGGTTCAGGTTA+TGG 0.336276 2.1:-53670044 MS.gene060406:CDS
TAGATACCGGTTACGCCATT+TGG 0.338665 2.1:-53667803 MS.gene060406:CDS
GAAGCGTGAACAAAAGAAAA+AGG 0.344883 2.1:-53671365 MS.gene060406:CDS
GTTGGCATCACAGGGTTTCC+AGG 0.345455 2.1:-53669347 MS.gene060406:intron
TCGACTTTACTCCACCATTC+AGG 0.346664 2.1:-53667138 MS.gene060406:intron
CAGAGGTTCGAGAAATATTC+AGG 0.351833 2.1:-53667765 MS.gene060406:CDS
GGAGTAAAGTCGATTTCAAT+AGG 0.352799 2.1:+53667148 None:intergenic
TCAGCGCTCGTCAAGTCTTT+GGG 0.360897 2.1:+53666983 None:intergenic
CCTTCATGATGATGGTTTCA+AGG 0.372840 2.1:-53670056 MS.gene060406:CDS
TCTTTCAGAGTGTATGCTTC+GGG 0.379888 2.1:+53668722 None:intergenic
TAGGAAAGTGTGGGCAGGTT+AGG 0.380144 2.1:-53665076 MS.gene060406:CDS
CCAAAGGACTCATTATTTCT+GGG 0.380628 2.1:+53665790 None:intergenic
GTCTTTCAGAGTGTATGCTT+CGG 0.386185 2.1:+53668721 None:intergenic
TGAAACAACTGCGCGTTTGT+TGG 0.389362 2.1:-53666903 MS.gene060406:CDS
TGTTTAACTGCAGCAATACT+TGG 0.390068 2.1:-53670381 MS.gene060406:intron
CTTATGGTTTCGCCCGCGGC+GGG 0.395285 2.1:+53671513 None:intergenic
TCAAATCCAAATGGCGTAAC+CGG 0.406882 2.1:+53667797 None:intergenic
AACCTGTAAATGATTTAATT+GGG 0.410484 2.1:+53665159 None:intergenic
TGCAGCAATACTTGGAGAAC+AGG 0.411482 2.1:-53670373 MS.gene060406:intron
GTATCTCTTATGCAGTAAAT+CGG 0.414978 2.1:-53669426 MS.gene060406:intron
AACTCACAGGTAGTAAATTC+AGG 0.416154 2.1:+53667396 None:intergenic
CTAAAATCATTTCTTACGTT+AGG 0.416749 2.1:-53667735 MS.gene060406:CDS
GGAGAAGCTTGATTTCTTGG+AGG 0.421470 2.1:-53667704 MS.gene060406:intron
CCGGTCACCGCTCCCGCCGC+GGG 0.426816 2.1:-53671525 MS.gene060406:CDS
TGAACCGTGTTTATGAAATT+GGG 0.431634 2.1:-53667458 MS.gene060406:CDS
GGTTTCGCCCGCGGCGGGAG+CGG 0.431701 2.1:+53671518 None:intergenic
TCCGGTCACCGCTCCCGCCG+CGG 0.435107 2.1:-53671526 MS.gene060406:CDS
AGCTGCTGATGAGGAAGATA+TGG 0.435435 2.1:-53670499 MS.gene060406:CDS
GGTGATATTGTTGGCATCAC+AGG 0.435627 2.1:-53669356 MS.gene060406:CDS
CTTGTTATATTGCAGCTTGT+GGG 0.438111 2.1:-53665861 MS.gene060406:intron
GCATCTCAGGATCGGCAATC+AGG 0.444447 2.1:-53665443 MS.gene060406:intron
AACTGCGCGTTTGTTGGATA+AGG 0.447988 2.1:-53666897 MS.gene060406:intron
CAGAGAATTTGTGTGGATAT+GGG 0.448925 2.1:+53670312 None:intergenic
CCAGCAATCATGTTCATCAT+AGG 0.449515 2.1:+53667588 None:intergenic
TGACGATGAAGCAATGGCCT+TGG 0.459867 2.1:-53665420 MS.gene060406:CDS
TAACCTGCCCACACTTTCCT+AGG 0.465584 2.1:+53665078 None:intergenic
TAAGTATCTTGCAACTGAAA+AGG 0.466073 2.1:-53670348 MS.gene060406:CDS
AAATCGGACTTAAATGAGGC+TGG 0.466601 2.1:-53669410 MS.gene060406:CDS
AGGACAGAGAAGAAGAAAAG+AGG 0.469524 2.1:-53671345 MS.gene060406:CDS
AATCTTTGCCGTTGTACCAC+AGG 0.473425 2.1:+53665586 None:intergenic
ATCATGCACAAACGTTCCTC+TGG 0.476919 2.1:-53670100 MS.gene060406:CDS
CGCGCAGTTGTTTCAGGAGG+GGG 0.478600 2.1:+53666911 None:intergenic
TGCTTGGTACTAACTTTCCT+AGG 0.478899 2.1:-53665095 MS.gene060406:CDS
CCTATGATGAACATGATTGC+TGG 0.480055 2.1:-53667588 MS.gene060406:CDS
TCTTCCTCATCAGCAGCTGC+AGG 0.483241 2.1:+53670504 None:intergenic
TCGGAAGGAGGTTGTTCCAT+TGG 0.483881 2.1:+53671552 None:intergenic
ACAACCTCCTTCCGATCCTC+CGG 0.483944 2.1:-53671544 MS.gene060406:CDS
CCCAGAAATAATGAGTCCTT+TGG 0.485249 2.1:-53665790 MS.gene060406:CDS
TGGGAAACAATTTAGGAATG+AGG 0.485543 2.1:-53667439 MS.gene060406:CDS
ACATCTTGAGGTTTCATGGC+AGG 0.488702 2.1:+53665187 None:intergenic
CTTGCAACTGAAAAGGAAGA+AGG 0.491377 2.1:-53670341 MS.gene060406:CDS
AACTTCTTGAGATAGAGTTC+TGG 0.492412 2.1:+53667495 None:intergenic
GGGTGGTTTATGATGAATGT+AGG 0.493995 2.1:+53665810 None:intergenic
AGAAAAGAGGAGAAAGGACG+AGG 0.495374 2.1:-53671332 MS.gene060406:CDS
TGAGTTCTACATGGCTTACA+AGG 0.497849 2.1:-53667379 MS.gene060406:CDS
TGAAGCTAATCAATATCTAA+AGG 0.499766 2.1:-53666963 MS.gene060406:CDS
TACTACCTGTGAGTTCTACA+TGG 0.502707 2.1:-53667388 MS.gene060406:CDS
ACAATTCAAAACGTTCAGTC+AGG 0.503303 2.1:+53665742 None:intergenic
ATATTGTCTAATAGTAATAG+TGG 0.503546 2.1:+53670289 None:intergenic
AGAAGGATTGACATGATTGA+AGG 0.506536 2.1:-53667034 MS.gene060406:CDS
GTTTAATCTACATGACTGCT+TGG 0.507455 2.1:-53665111 MS.gene060406:CDS
AGAAGAAGAAAAGAGGAGAA+AGG 0.512295 2.1:-53671338 MS.gene060406:CDS
CAAACCTGCAGCTGCTGATG+AGG 0.516125 2.1:-53670508 MS.gene060406:CDS
TTGTTATATTGCAGCTTGTG+GGG 0.518871 2.1:-53665860 MS.gene060406:intron
TATGGTTTGCCACCAACTGC+TGG 0.519190 2.1:-53665371 MS.gene060406:CDS
GGGAAACAATTTAGGAATGA+GGG 0.523505 2.1:-53667438 MS.gene060406:CDS
GATGTCTCTGTATCTTTGAC+TGG 0.523700 2.1:-53670224 MS.gene060406:intron
TATTAAGCATCAAATCCAAA+TGG 0.524059 2.1:+53667788 None:intergenic
GTGATATTGTTGGCATCACA+GGG 0.528568 2.1:-53669355 MS.gene060406:CDS
TCAAAACGTTCAGTCAGGCC+TGG 0.531441 2.1:+53665747 None:intergenic
TCTTATAGGAAACTAGATAC+CGG 0.534162 2.1:-53667816 MS.gene060406:intron
GGGAGCGGTGACCGGAGGAT+CGG 0.535162 2.1:+53671533 None:intergenic
TTGCCACCAACTGCTGGTTG+GGG 0.535671 2.1:-53665365 MS.gene060406:CDS
TTTGATTTCGTACTTCAAGC+AGG 0.536453 2.1:+53666937 None:intergenic
AATATGAAGGTTTAAGTGAC+GGG 0.538203 2.1:-53670259 MS.gene060406:CDS
GTTTGCCACCAACTGCTGGT+TGG 0.542444 2.1:-53665367 MS.gene060406:CDS
TTTGCTTATGGTTTCGCCCG+CGG 0.542525 2.1:+53671509 None:intergenic
GCGGTGACCGGAGGATCGGA+AGG 0.543144 2.1:+53671537 None:intergenic
TTGCAACTGAAAAGGAAGAA+GGG 0.547876 2.1:-53670340 MS.gene060406:CDS
TATCTCAAGAAGTTGATTGT+CGG 0.550557 2.1:-53667486 MS.gene060406:CDS
CACCACGCTTCACATTAGAA+TGG 0.550558 2.1:+53669375 None:intergenic
TTAATTGCCCAGGCAAAAGC+AGG 0.551126 2.1:-53668874 MS.gene060406:intron
CATCTTGAGGTTTCATGGCA+GGG 0.551240 2.1:+53665188 None:intergenic
TTCGAGAAATATTCAGGACT+AGG 0.551672 2.1:-53667759 MS.gene060406:CDS
GATCTGTGCCACTTTGCCAA+AGG 0.552477 2.1:+53665774 None:intergenic
ATTGTCTGCATATGATGCCT+AGG 0.553922 2.1:-53668805 MS.gene060406:CDS
TACTATTAGACAATATATCA+AGG 0.555912 2.1:-53670282 MS.gene060406:CDS
CAATATATCAAGGAATATGA+AGG 0.556142 2.1:-53670272 MS.gene060406:CDS
GTGAAGCGTGGTGATATTGT+TGG 0.556325 2.1:-53669365 MS.gene060406:CDS
AATCGGACTTAAATGAGGCT+GGG 0.558767 2.1:-53669409 MS.gene060406:CDS
TATGGTGTATGAACTTACAA+AGG 0.559124 2.1:-53667215 MS.gene060406:CDS
AAACCCCAACCAGCAGTTGG+TGG 0.560727 2.1:+53665362 None:intergenic
TGCCCAGGCAAAAGCAGGAA+GGG 0.562692 2.1:-53668869 MS.gene060406:intron
AAAATCAAGTATCATGCAGA+TGG 0.563651 2.1:-53667184 MS.gene060406:CDS
GAGTAAAGTCGATTTCAATA+GGG 0.569876 2.1:+53667149 None:intergenic
TGTGCAAAATGTTTCGTCCA+AGG 0.570692 2.1:+53665403 None:intergenic
TAATGAGTCCTTTGGCAAAG+TGG 0.571666 2.1:-53665782 MS.gene060406:CDS
AATTGGGACACGACATCTTG+AGG 0.573397 2.1:+53665175 None:intergenic
ATCTTTGCCGTTGTACCACA+GGG 0.576007 2.1:+53665587 None:intergenic
ATGGTGTATGAACTTACAAA+GGG 0.577118 2.1:-53667214 MS.gene060406:CDS
GATTGAAGGACTAGAGGAGA+TGG 0.578488 2.1:-53667020 MS.gene060406:CDS
AACGCGCAGTTGTTTCAGGA+GGG 0.582229 2.1:+53666909 None:intergenic
TTTCCTAGGAAAGTGTGGGC+AGG 0.584303 2.1:-53665081 MS.gene060406:CDS
GCCCAGGCAAAAGCAGGAAG+GGG 0.585020 2.1:-53668868 MS.gene060406:intron
CCCAGGCAAAAGCAGGAAGG+GGG 0.588849 2.1:-53668867 MS.gene060406:intron
GGATTTGATGCTTAATACAG+AGG 0.589305 2.1:-53667782 MS.gene060406:CDS
CCCAAACCCCAACCAGCAGT+TGG 0.589937 2.1:+53665359 None:intergenic
ATCAGGTGACGATGAAGCAA+TGG 0.591898 2.1:-53665426 MS.gene060406:CDS
GTTTCCCAATTTCATAAACA+CGG 0.593044 2.1:+53667454 None:intergenic
GCTTATGGTTTCGCCCGCGG+CGG 0.594753 2.1:+53671512 None:intergenic
GAATATGAAGGTTTAAGTGA+CGG 0.594956 2.1:-53670260 MS.gene060406:CDS
CTAACTTTCCTAGGAAAGTG+TGG 0.595042 2.1:-53665086 MS.gene060406:CDS
GTAAGCCATGTAGAACTCAC+AGG 0.595094 2.1:+53667383 None:intergenic
TAGGCTGCTGAAATGAGAAG+TGG 0.596500 2.1:-53670540 MS.gene060406:CDS
ATGCACACAACACACCTGAA+TGG 0.598541 2.1:+53667124 None:intergenic
CAGTAAATCGGACTTAAATG+AGG 0.600372 2.1:-53669414 MS.gene060406:CDS
ATTGTTTATCAACAAACATG+AGG 0.601110 2.1:-53665724 MS.gene060406:intron
TTGCCCAGGCAAAAGCAGGA+AGG 0.601542 2.1:-53668870 MS.gene060406:intron
CAACAATGGGTACCTCGCAT+CGG 0.602104 2.1:+53670021 None:intergenic
CACACAACACACCTGAATGG+TGG 0.605501 2.1:+53667127 None:intergenic
CTCAAGAAGTTGATTGTCGG+TGG 0.605521 2.1:-53667483 MS.gene060406:CDS
GCGGCGGGAGCGGTGACCGG+AGG 0.606172 2.1:+53671528 None:intergenic
CCTTGAAACCATCATCATGA+AGG 0.608043 2.1:+53670056 None:intergenic
AAGATTTGCTGATCAACTCA+AGG 0.608986 2.1:-53665569 MS.gene060406:intron
TGAATGACCCTGTGGTACAA+CGG 0.609536 2.1:-53665594 MS.gene060406:CDS
AAAGACGAGCTTTGCACCAG+AGG 0.612017 2.1:+53670084 None:intergenic
AAACGCGCAGTTGTTTCAGG+AGG 0.613190 2.1:+53666908 None:intergenic
TCATTATGATGAGTTACGAA+TGG 0.615836 2.1:+53667549 None:intergenic
TGACATGATTGAAGGACTAG+AGG 0.616183 2.1:-53667026 MS.gene060406:CDS
GAAGGACTAGAGGAGATGGC+AGG 0.616562 2.1:-53667016 MS.gene060406:CDS
TTCAGGTTATGGCCGATGCG+AGG 0.639844 2.1:-53670033 MS.gene060406:intron
ACGCGCAGTTGTTTCAGGAG+GGG 0.645803 2.1:+53666910 None:intergenic
TGAGGAAGATATGGATCCAA+CGG 0.647707 2.1:-53670490 MS.gene060406:intron
GTCCATTCTAATGTGAAGCG+TGG 0.650854 2.1:-53669377 MS.gene060406:CDS
TAACTTTCCTAGGAAAGTGT+GGG 0.654622 2.1:-53665085 MS.gene060406:CDS
GTGACCGGAGGATCGGAAGG+AGG 0.658624 2.1:+53671540 None:intergenic
ATAGTGGCAGAGAATTTGTG+TGG 0.661712 2.1:+53670305 None:intergenic
AAGGACTCATTATTTCTGGG+TGG 0.663368 2.1:+53665793 None:intergenic
ATGATGAACATGATTGCTGG+TGG 0.667461 2.1:-53667585 MS.gene060406:CDS
AAGTGGCACAGATCAAAACC+AGG 0.673243 2.1:-53665765 MS.gene060406:CDS
AGCATACACTCTGAAAGACC+AGG 0.674383 2.1:-53668717 MS.gene060406:intron
TCATGCAGATGGTCTTGACA+AGG 0.674921 2.1:-53667173 MS.gene060406:CDS
TCAAGTCTTTGGGAATACTG+AGG 0.686954 2.1:+53666993 None:intergenic
ATAACAGAGAACATGTTGAG+CGG 0.725018 2.1:-53667336 MS.gene060406:intron
CACTGAATTGAATGACCCTG+TGG 0.748793 2.1:-53665602 MS.gene060406:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGAAAAATTATTACAT+AGG - chr2.1:53668366-53668385 MS.gene060406:intron 10.0%
!! ATTTATGATTTAAAAATTAG+AGG - chr2.1:53670551-53670570 MS.gene060406:intron 10.0%
!! CTTAATATGTAAAAAAAAAT+TGG + chr2.1:53666820-53666839 None:intergenic 10.0%
!! TAATATGTAAAAAAAAATTG+GGG + chr2.1:53666818-53666837 None:intergenic 10.0%
!! TTATTATTTCATAGAAAATA+TGG + chr2.1:53671123-53671142 None:intergenic 10.0%
!!! CAATTTTTTTTTACATATTA+AGG - chr2.1:53666818-53666837 MS.gene060406:intron 10.0%
!!! GAATTATAATATCATTTTAA+AGG - chr2.1:53667703-53667722 MS.gene060406:intron 10.0%
!!! GATGAAAATATATTTTATAA+GGG + chr2.1:53666898-53666917 None:intergenic 10.0%
!!! GTTTAAAACAAAAAAAAAAA+AGG + chr2.1:53665196-53665215 None:intergenic 10.0%
!!! TAGAATACAATATTTTATAT+CGG + chr2.1:53666647-53666666 None:intergenic 10.0%
!!! TATATAAAACATAAATTTTC+AGG + chr2.1:53666033-53666052 None:intergenic 10.0%
!!! TATGTAATAATTTTTCATTT+TGG + chr2.1:53668367-53668386 None:intergenic 10.0%
!!! TCTATTCTTAAAATTTTATT+TGG + chr2.1:53670581-53670600 None:intergenic 10.0%
!!! TGATGAAAATATATTTTATA+AGG + chr2.1:53666899-53666918 None:intergenic 10.0%
!! AAAAAAATCAATCATATCAA+AGG + chr2.1:53670472-53670491 None:intergenic 15.0%
!! AAAAATTTCTATGAGAATAA+AGG - chr2.1:53670131-53670150 MS.gene060406:intron 15.0%
!! AAAATTTCTATGAGAATAAA+GGG - chr2.1:53670132-53670151 MS.gene060406:intron 15.0%
!! AACATTAAAAACTAAAGTTA+TGG + chr2.1:53670506-53670525 None:intergenic 15.0%
!! ACATTAAAAACTAAAGTTAT+GGG + chr2.1:53670505-53670524 None:intergenic 15.0%
!! CAAAAAAAATATATCATTCA+TGG - chr2.1:53670648-53670667 MS.gene060406:intron 15.0%
!! TACATCAAATAGAAAAATAT+TGG + chr2.1:53667647-53667666 None:intergenic 15.0%
!! TTATTTAAATCCTACTAATT+GGG - chr2.1:53667621-53667640 MS.gene060406:intron 15.0%
!! TTTATTTAAATCCTACTAAT+TGG - chr2.1:53667620-53667639 MS.gene060406:intron 15.0%
!!! AAAAATGTACATTTCATTTT+AGG - chr2.1:53668704-53668723 MS.gene060406:intron 15.0%
!!! ATAATCAAGTTTTACATAAA+AGG + chr2.1:53669804-53669823 None:intergenic 15.0%
!!! ATCATTTTGAAATATTGATT+TGG - chr2.1:53669538-53669557 MS.gene060406:intron 15.0%
!!! CATGAATGATATATTTTTTT+TGG + chr2.1:53670650-53670669 None:intergenic 15.0%
!!! TAAAATTTTAAGAATAGACT+TGG - chr2.1:53670583-53670602 MS.gene060406:intron 15.0%
!!! TAATCAAGTTTTACATAAAA+GGG + chr2.1:53669803-53669822 None:intergenic 15.0%
!!! TTCTTTTTCAAATTTATAGT+TGG - chr2.1:53668129-53668148 MS.gene060406:intron 15.0%
!! AAACCTGTAAATGATTTAAT+TGG + chr2.1:53671455-53671474 None:intergenic 20.0%
!! AACCTGTAAATGATTTAATT+GGG + chr2.1:53671454-53671473 None:intergenic 20.0%
!! AACTAATATATTTAAACTCG+AGG - chr2.1:53668439-53668458 MS.gene060406:intron 20.0%
!! AGGAAAAAAAAAAACTATCA+AGG + chr2.1:53670408-53670427 None:intergenic 20.0%
!! ATATAGAAGAAATAACATGT+TGG + chr2.1:53666176-53666195 None:intergenic 20.0%
!! ATATTGTCTAATAGTAATAG+TGG + chr2.1:53666324-53666343 None:intergenic 20.0%
!! ATGTAATGTAAACAATTGTT+AGG - chr2.1:53665602-53665621 MS.gene060406:CDS 20.0%
!! CTTTGACATAACAATAAATA+AGG - chr2.1:53667362-53667381 MS.gene060406:CDS 20.0%
!! GATACTATCTTATTAAATGT+TGG - chr2.1:53668000-53668019 MS.gene060406:intron 20.0%
!! TACACATAAAATTCATTAAC+AGG + chr2.1:53670215-53670234 None:intergenic 20.0%
!! TACTATTAGACAATATATCA+AGG - chr2.1:53666328-53666347 MS.gene060406:intron 20.0%
!! TTAAATATATAACAAAAGCC+AGG + chr2.1:53668212-53668231 None:intergenic 20.0%
!! TTAGAAATGTATTAACTCTT+TGG - chr2.1:53667412-53667431 MS.gene060406:CDS 20.0%
!!! AACAAGTTCTTATTTTAAGA+TGG - chr2.1:53666935-53666954 MS.gene060406:CDS 20.0%
!!! ACAAGTTCTTATTTTAAGAT+GGG - chr2.1:53666936-53666955 MS.gene060406:CDS 20.0%
!!! ACCTTTTTAAGCTTAAATTT+TGG + chr2.1:53666717-53666736 None:intergenic 20.0%
!!! ACTCAATTATCTTTTCTTAT+AGG - chr2.1:53668780-53668799 MS.gene060406:intron 20.0%
!!! CCTTTTTAAGCTTAAATTTT+GGG + chr2.1:53666716-53666735 None:intergenic 20.0%
!!! GTTTTTGTTTTTGAATTTAG+TGG - chr2.1:53666432-53666451 MS.gene060406:intron 20.0%
!!! TAATATGTTTTCTGTATTTC+AGG - chr2.1:53666483-53666502 MS.gene060406:intron 20.0%
!!! TACAATAGCACAATTTTTTT+GGG - chr2.1:53669841-53669860 MS.gene060406:intron 20.0%
!!! TATAACGTCAATACTTTTTT+AGG - chr2.1:53666051-53666070 MS.gene060406:intron 20.0%
!!! TATTCATATTCTAGAGTTTT+AGG - chr2.1:53669890-53669909 MS.gene060406:intron 20.0%
!!! TGATTTTATTCTTTGCATTT+TGG - chr2.1:53665394-53665413 MS.gene060406:CDS 20.0%
!!! TGTTACTTAGTTTCAAAATT+TGG - chr2.1:53667574-53667593 MS.gene060406:CDS 20.0%
!!! TTACAATAGCACAATTTTTT+TGG - chr2.1:53669840-53669859 MS.gene060406:intron 20.0%
!!! TTTTCTATTTGATGTATACT+TGG - chr2.1:53667651-53667670 MS.gene060406:intron 20.0%
!!! TTTTTGTGTATTGAAAGATA+AGG - chr2.1:53668566-53668585 MS.gene060406:intron 20.0%
!!! TTTTTTTTTAACAATAGGCT+TGG - chr2.1:53665896-53665915 MS.gene060406:intron 20.0%
! AAAATTGAAGGAAACAACAA+TGG + chr2.1:53666606-53666625 None:intergenic 25.0%
! AAACAAAATAATAAGAGTCC+TGG + chr2.1:53667308-53667327 None:intergenic 25.0%
! AAAGAATTACAGACTTCATA+TGG + chr2.1:53667346-53667365 None:intergenic 25.0%
! AAATTGAAGGAAACAACAAT+GGG + chr2.1:53666605-53666624 None:intergenic 25.0%
! AAGGTAAATAAATGCACATA+AGG + chr2.1:53668165-53668184 None:intergenic 25.0%
! ACATATTAACATATTAGACC+AGG - chr2.1:53669932-53669951 MS.gene060406:intron 25.0%
! ACTTAGTTTCAAAATTTGGA+GGG - chr2.1:53667578-53667597 MS.gene060406:CDS 25.0%
! ATATCAAATGACTTTAGCAT+GGG - chr2.1:53668498-53668517 MS.gene060406:intron 25.0%
! ATATGATATCTGAATCTGAT+TGG - chr2.1:53665794-53665813 MS.gene060406:CDS 25.0%
! ATGAAATTGGGAAACAATTT+AGG - chr2.1:53669164-53669183 MS.gene060406:intron 25.0%
! ATTGTTTATCAACAAACATG+AGG - chr2.1:53670886-53670905 MS.gene060406:intron 25.0%
! CAATATATCAAGGAATATGA+AGG - chr2.1:53666338-53666357 MS.gene060406:intron 25.0%
! CCCAAAATTTAAGCTTAAAA+AGG - chr2.1:53666713-53666732 MS.gene060406:intron 25.0%
! CTAAAATCATTTCTTACGTT+AGG - chr2.1:53668875-53668894 MS.gene060406:intron 25.0%
! CTCTACATATGTAAAATTGA+AGG + chr2.1:53666618-53666637 None:intergenic 25.0%
! GAAGATTTGTAAATCTAGTA+AGG - chr2.1:53665664-53665683 MS.gene060406:intron 25.0%
! GAATTACCACTTATATTTAG+TGG + chr2.1:53670253-53670272 None:intergenic 25.0%
! GGATTGTTTATTATTACAGA+AGG - chr2.1:53669559-53669578 MS.gene060406:intron 25.0%
! TAAACAGTTGTCTTTGTAAA+TGG - chr2.1:53670031-53670050 MS.gene060406:intron 25.0%
! TACTTAGTTTCAAAATTTGG+AGG - chr2.1:53667577-53667596 MS.gene060406:CDS 25.0%
! TATTAAGCATCAAATCCAAA+TGG + chr2.1:53668825-53668844 None:intergenic 25.0%
! TCTTTCATGTATAATTTAGC+AGG - chr2.1:53667146-53667165 MS.gene060406:CDS 25.0%
! TGAAGCTAATCAATATCTAA+AGG - chr2.1:53669647-53669666 MS.gene060406:intron 25.0%
! TGATGTAAACAATTGATCAA+TGG - chr2.1:53665932-53665951 MS.gene060406:intron 25.0%
! TTATGTGCATTTATTTACCT+TGG - chr2.1:53668164-53668183 MS.gene060406:intron 25.0%
! TTCAGGAATTGAAATCAATA+AGG + chr2.1:53666016-53666035 None:intergenic 25.0%
! TTTACAAAGACAACTGTTTA+CGG + chr2.1:53670031-53670050 None:intergenic 25.0%
!! AAAATTGTGCTATTGTAACA+AGG + chr2.1:53669838-53669857 None:intergenic 25.0%
!! CTTATAATTTTCTGTCCTTT+TGG - chr2.1:53671379-53671398 MS.gene060406:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+TGG + chr2.1:53665735-53665754 None:intergenic 25.0%
!! TGTATTAACTCTTTGGAAAT+AGG - chr2.1:53667419-53667438 MS.gene060406:CDS 25.0%
!!! ATAATCTAACCTTTGATTTG+CGG - chr2.1:53665465-53665484 MS.gene060406:intron 25.0%
!!! ATCTGCATGTTCATTTTTTT+TGG - chr2.1:53671350-53671369 MS.gene060406:CDS 25.0%
!!! ATGAACTGTTTTTTGTTACT+TGG - chr2.1:53666204-53666223 MS.gene060406:intron 25.0%
!!! ATTCTAGAGTTTTAGGTATA+TGG - chr2.1:53669897-53669916 MS.gene060406:intron 25.0%
!!! CTAACATAGAAGTATTTGTT+TGG - chr2.1:53667027-53667046 MS.gene060406:CDS 25.0%
!!! TCCAAATTTTCAAGATGTTT+TGG - chr2.1:53667055-53667074 MS.gene060406:intron 25.0%
!!! TGAACTGTTTTTTGTTACTT+GGG - chr2.1:53666205-53666224 MS.gene060406:intron 25.0%
!!! TGCTATAGTTTTGTGAATTT+AGG - chr2.1:53668252-53668271 MS.gene060406:intron 25.0%
!!! TTAGTTTTCTGTGTTATGTT+TGG - chr2.1:53669969-53669988 MS.gene060406:intron 25.0%
AAAAACTTAACCCACTAAGT+GGG + chr2.1:53665853-53665872 None:intergenic 30.0%
AAAAAGGAGAAATTCAACGA+TGG + chr2.1:53665180-53665199 None:intergenic 30.0%
AAAATATTGGCCCAATTAGT+AGG + chr2.1:53667634-53667653 None:intergenic 30.0%
AAAATCAAGTATCATGCAGA+TGG - chr2.1:53669426-53669445 MS.gene060406:intron 30.0%
AAACTATTCTATCTTCAGAC+TGG - chr2.1:53667485-53667504 MS.gene060406:CDS 30.0%
AAATGTAGAGATTAACGAGT+TGG - chr2.1:53665765-53665784 MS.gene060406:CDS 30.0%
AAATTAAGTGAAGTCCTATC+AGG - chr2.1:53667445-53667464 MS.gene060406:CDS 30.0%
AACTATTCTATCTTCAGACT+GGG - chr2.1:53667486-53667505 MS.gene060406:CDS 30.0%
AAGTAACAAAAACAGTGATC+AGG + chr2.1:53670969-53670988 None:intergenic 30.0%
AATATGAAGGTTTAAGTGAC+GGG - chr2.1:53666351-53666370 MS.gene060406:intron 30.0%
AATGTAGAGATTAACGAGTT+GGG - chr2.1:53665766-53665785 MS.gene060406:CDS 30.0%
ACAAACATGAGGTAATATCA+TGG - chr2.1:53670897-53670916 MS.gene060406:intron 30.0%
AGATGGTGAAAACTTGATTT+AGG - chr2.1:53665639-53665658 MS.gene060406:intron 30.0%
ATAACATGTTGGAAACATTG+CGG + chr2.1:53666165-53666184 None:intergenic 30.0%
ATGAAATAGTTATCGATGAG+AGG - chr2.1:53669996-53670015 MS.gene060406:intron 30.0%
ATGGTGTATGAACTTACAAA+GGG - chr2.1:53669396-53669415 MS.gene060406:CDS 30.0%
CCATCTTTAGATATCATTCA+TGG - chr2.1:53670617-53670636 MS.gene060406:intron 30.0%
CCATGAATGATATCTAAAGA+TGG + chr2.1:53670620-53670639 None:intergenic 30.0%
GAATATGAAGGTTTAAGTGA+CGG - chr2.1:53666350-53666369 MS.gene060406:intron 30.0%
GAGAAATAAGAAATTCACGA+AGG + chr2.1:53670428-53670447 None:intergenic 30.0%
GATATCAAATGACTTTAGCA+TGG - chr2.1:53668497-53668516 MS.gene060406:intron 30.0%
GATGGTGAAAACTTGATTTA+GGG - chr2.1:53665640-53665659 MS.gene060406:intron 30.0%
GCCAAAACATCTTGAAAATT+TGG + chr2.1:53667059-53667078 None:intergenic 30.0%
GTATCTCTTATGCAGTAAAT+CGG - chr2.1:53667184-53667203 MS.gene060406:CDS 30.0%
GTCCCAATTAAATCATTTAC+AGG - chr2.1:53671449-53671468 MS.gene060406:intron 30.0%
GTTTCCCAATTTCATAAACA+CGG + chr2.1:53669159-53669178 None:intergenic 30.0%
TAAATTTAAGCACGAATCGA+AGG + chr2.1:53665344-53665363 None:intergenic 30.0%
TAAGTATCTTGCAACTGAAA+AGG - chr2.1:53666262-53666281 MS.gene060406:intron 30.0%
TACTTTGAGTATCCTTATGT+TGG - chr2.1:53668938-53668957 MS.gene060406:intron 30.0%
TATACATAGCAGAATAATGC+TGG + chr2.1:53668603-53668622 None:intergenic 30.0%
TATCTTAGAGGGTTATAATG+AGG - chr2.1:53667975-53667994 MS.gene060406:intron 30.0%
TATGGTGTATGAACTTACAA+AGG - chr2.1:53669395-53669414 MS.gene060406:CDS 30.0%
TCAAGTTATTGCAAAAGCTA+GGG - chr2.1:53670364-53670383 MS.gene060406:CDS 30.0%
TCATTATGATGAGTTACGAA+TGG + chr2.1:53669064-53669083 None:intergenic 30.0%
TCTTACAGATAGATACATGA+AGG + chr2.1:53670328-53670347 None:intergenic 30.0%
TCTTATAGGAAACTAGATAC+CGG - chr2.1:53668794-53668813 MS.gene060406:CDS 30.0%
TGAACCGTGTTTATGAAATT+GGG - chr2.1:53669152-53669171 MS.gene060406:intron 30.0%
TTGAAACCATTGAATAGGTA+TGG - chr2.1:53669377-53669396 MS.gene060406:CDS 30.0%
TTGTGTATTGAAAGATAAGG+TGG - chr2.1:53668569-53668588 MS.gene060406:intron 30.0%
! AAGTTTTCACCATCTTTTCT+AGG + chr2.1:53665634-53665653 None:intergenic 30.0%
! ATATCGTTTTCATTTTCTCC+TGG - chr2.1:53669738-53669757 MS.gene060406:intron 30.0%
! CTTTTGCCACTAAATATAAG+TGG - chr2.1:53670244-53670263 MS.gene060406:CDS 30.0%
! GACTGATTCACAAAATATCA+AGG - chr2.1:53671298-53671317 MS.gene060406:intron 30.0%
! GAGTAAAGTCGATTTCAATA+GGG + chr2.1:53669464-53669483 None:intergenic 30.0%
! TATCTCAAGAAGTTGATTGT+CGG - chr2.1:53669124-53669143 MS.gene060406:intron 30.0%
! TATTTTCCCCAAAACTTTTG+TGG - chr2.1:53667773-53667792 MS.gene060406:CDS 30.0%
! TTCAAGTTATTGCAAAAGCT+AGG - chr2.1:53670363-53670382 MS.gene060406:CDS 30.0%
! TTTTATGACCTTCATGATGA+TGG - chr2.1:53666546-53666565 MS.gene060406:intron 30.0%
! TTTTGATAAACCTTTCTCTG+TGG - chr2.1:53668632-53668651 MS.gene060406:intron 30.0%
!! TAACCCTCTAAGATAGTATA+TGG + chr2.1:53667970-53667989 None:intergenic 30.0%
!! TAATCTAACCTTTGATTTGC+GGG - chr2.1:53665466-53665485 MS.gene060406:intron 30.0%
!!! TTTTTTAACAATAGGCTTGG+TGG - chr2.1:53665899-53665918 MS.gene060406:intron 30.0%
AAAACTTAACCCACTAAGTG+GGG + chr2.1:53665852-53665871 None:intergenic 35.0%
AAACATTGCGGTGAAAAAAG+GGG + chr2.1:53666153-53666172 None:intergenic 35.0%
AAAGTAGGTGAATGAATGGA+AGG + chr2.1:53668981-53669000 None:intergenic 35.0%
AAATAGTTATCGATGAGAGG+AGG - chr2.1:53669999-53670018 MS.gene060406:intron 35.0%
AACTCACAGGTAGTAAATTC+AGG + chr2.1:53669217-53669236 None:intergenic 35.0%
AACTTCTTGAGATAGAGTTC+TGG + chr2.1:53669118-53669137 None:intergenic 35.0%
AAGCTTCAGAATTGCAATAC+AGG + chr2.1:53668524-53668543 None:intergenic 35.0%
AATGGAAGGAAAGAAATCAC+AGG + chr2.1:53668967-53668986 None:intergenic 35.0%
ACAATTCAAAACGTTCAGTC+AGG + chr2.1:53670871-53670890 None:intergenic 35.0%
ACTATGCAAACTATCCTGAT+AGG + chr2.1:53667462-53667481 None:intergenic 35.0%
AGAAGAAGAAAAGAGGAGAA+AGG - chr2.1:53665272-53665291 MS.gene060406:intron 35.0%
AGAAGGATTGACATGATTGA+AGG - chr2.1:53669576-53669595 MS.gene060406:intron 35.0%
AGAATAGACTTGGAGTTGAA+TGG - chr2.1:53670593-53670612 MS.gene060406:intron 35.0%
ATAACAGAGAACATGTTGAG+CGG - chr2.1:53669274-53669293 MS.gene060406:intron 35.0%
ATCTAAATGCTATCCACCAT+AGG + chr2.1:53668044-53668063 None:intergenic 35.0%
ATGGAAGGAAAGAAATCACA+GGG + chr2.1:53668966-53668985 None:intergenic 35.0%
ATTATACCCAAACAAAAGCC+AGG + chr2.1:53669759-53669778 None:intergenic 35.0%
CAAGGACTACAATGACTTAA+TGG - chr2.1:53669249-53669268 MS.gene060406:intron 35.0%
CAGAGAATTTGTGTGGATAT+GGG + chr2.1:53666301-53666320 None:intergenic 35.0%
CAGTAAATCGGACTTAAATG+AGG - chr2.1:53667196-53667215 MS.gene060406:CDS 35.0%
CAGTCAATAACATAGTCAAC+CGG + chr2.1:53671283-53671302 None:intergenic 35.0%
CATACACCATACCTATTCAA+TGG + chr2.1:53669386-53669405 None:intergenic 35.0%
CTGAACCGTGTTTATGAAAT+TGG - chr2.1:53669151-53669170 MS.gene060406:intron 35.0%
CTGCCATATACTATCTTAGA+GGG - chr2.1:53667964-53667983 MS.gene060406:intron 35.0%
GAAAAACTTAACCCACTAAG+TGG + chr2.1:53665854-53665873 None:intergenic 35.0%
GAAACATTGCGGTGAAAAAA+GGG + chr2.1:53666154-53666173 None:intergenic 35.0%
GAAGCGTGAACAAAAGAAAA+AGG - chr2.1:53665245-53665264 MS.gene060406:intron 35.0%
GAATCGAAGGTTTCGATAAA+TGG + chr2.1:53665331-53665350 None:intergenic 35.0%
GCAATTCATGCTATAATACC+TGG + chr2.1:53667914-53667933 None:intergenic 35.0%
GGATAAGAGAATTACCTTTC+TGG + chr2.1:53665310-53665329 None:intergenic 35.0%
GGATTTGATGCTTAATACAG+AGG - chr2.1:53668828-53668847 MS.gene060406:CDS 35.0%
GGGAAACAATTTAGGAATGA+GGG - chr2.1:53669172-53669191 MS.gene060406:intron 35.0%
GGTGGATAGCATTTAGATTA+GGG - chr2.1:53668046-53668065 MS.gene060406:intron 35.0%
GTTTAATCTACATGACTGCT+TGG - chr2.1:53671499-53671518 MS.gene060406:intron 35.0%
GTTTGCAATTGTCTCATGAA+TGG + chr2.1:53667526-53667545 None:intergenic 35.0%
TAAATTTCCCCGCAAATCAA+AGG + chr2.1:53665477-53665496 None:intergenic 35.0%
TCGTGTTGAAACCATTGAAT+AGG - chr2.1:53669372-53669391 MS.gene060406:CDS 35.0%
TCTAAATGCTATCCACCATA+GGG + chr2.1:53668043-53668062 None:intergenic 35.0%
TCTATGTTAGTCAAACACCA+AGG + chr2.1:53667017-53667036 None:intergenic 35.0%
TCTGCCATATACTATCTTAG+AGG - chr2.1:53667963-53667982 MS.gene060406:intron 35.0%
TGGAAAAGTAGGTGAATGAA+TGG + chr2.1:53668985-53669004 None:intergenic 35.0%
TGGGAAACAATTTAGGAATG+AGG - chr2.1:53669171-53669190 MS.gene060406:intron 35.0%
TGTACTTCTTTCCTGTATCT+GGG - chr2.1:53670300-53670319 MS.gene060406:CDS 35.0%
TGTTTAACTGCAGCAATACT+TGG - chr2.1:53666229-53666248 MS.gene060406:intron 35.0%
TTAGCGATGAGAAAGAGATT+CGG + chr2.1:53665138-53665157 None:intergenic 35.0%
TTCGAGAAATATTCAGGACT+AGG - chr2.1:53668851-53668870 MS.gene060406:CDS 35.0%
TTGCAACTGAAAAGGAAGAA+GGG - chr2.1:53666270-53666289 MS.gene060406:intron 35.0%
TTGTTATATTGCAGCTTGTG+GGG - chr2.1:53670750-53670769 MS.gene060406:intron 35.0%
! CACTGACTATAAAGAATCCA+AGG + chr2.1:53668184-53668203 None:intergenic 35.0%
! CCAAAGGACTCATTATTTCT+GGG + chr2.1:53670823-53670842 None:intergenic 35.0%
! CTTGTTATATTGCAGCTTGT+GGG - chr2.1:53670749-53670768 MS.gene060406:intron 35.0%
! GGAGTAAAGTCGATTTCAAT+AGG + chr2.1:53669465-53669484 None:intergenic 35.0%
! TAACTTTCCTAGGAAAGTGT+GGG - chr2.1:53671525-53671544 MS.gene060406:CDS 35.0%
! TCTTGTTATATTGCAGCTTG+TGG - chr2.1:53670748-53670767 MS.gene060406:intron 35.0%
! TGGTGGATAGCATTTAGATT+AGG - chr2.1:53668045-53668064 MS.gene060406:intron 35.0%
! TTCTTACGTTAGGAGTTTTC+TGG - chr2.1:53668885-53668904 MS.gene060406:intron 35.0%
! TTTGATTTCGTACTTCAAGC+AGG + chr2.1:53669676-53669695 None:intergenic 35.0%
!! AAGATTTGCTGATCAACTCA+AGG - chr2.1:53671041-53671060 MS.gene060406:intron 35.0%
!! AATCTAACCTTTGATTTGCG+GGG - chr2.1:53665467-53665486 MS.gene060406:intron 35.0%
!! ATTTTCTCCTGGCTTTTGTT+TGG - chr2.1:53669749-53669768 MS.gene060406:intron 35.0%
!! TTTTCCTTGTTTAATTGCCC+AGG - chr2.1:53667726-53667745 MS.gene060406:CDS 35.0%
!! TTTTCTCCTGGCTTTTGTTT+GGG - chr2.1:53669750-53669769 MS.gene060406:intron 35.0%
!! TTTTCTGTCCTTTTGGTTAC+AGG - chr2.1:53671386-53671405 MS.gene060406:intron 35.0%
!!! TTCACCATCTTTTCTAGGAT+AGG + chr2.1:53665629-53665648 None:intergenic 35.0%
!!! TTTGGTTTGTTTTGCATCTC+AGG - chr2.1:53671154-53671173 MS.gene060406:intron 35.0%
!!! TTTGTTTTGCATCTCAGGAT+CGG - chr2.1:53671159-53671178 MS.gene060406:intron 35.0%
AAAATATGGCCAACAGCTTG+AGG + chr2.1:53671109-53671128 None:intergenic 40.0%
AAATCGGACTTAAATGAGGC+TGG - chr2.1:53667200-53667219 MS.gene060406:CDS 40.0%
AAGAACCTCCTGTAACCAAA+AGG + chr2.1:53671397-53671416 None:intergenic 40.0%
AAGCAAACACATAGCAACGA+AGG + chr2.1:53666683-53666702 None:intergenic 40.0%
AAGGAGAAATTCAACGATGG+TGG + chr2.1:53665177-53665196 None:intergenic 40.0%
AATCACAGGGATCCAACATA+AGG + chr2.1:53668953-53668972 None:intergenic 40.0%
AATCGGACTTAAATGAGGCT+GGG - chr2.1:53667201-53667220 MS.gene060406:CDS 40.0%
ACTTGTCAGGTACTTAGTGA+AGG - chr2.1:53668283-53668302 MS.gene060406:intron 40.0%
AGATTTGACTCCTGTTACCT+TGG - chr2.1:53666997-53667016 MS.gene060406:CDS 40.0%
AGGACAGAGAAGAAGAAAAG+AGG - chr2.1:53665265-53665284 MS.gene060406:intron 40.0%
AGGACCTATCCTAGAAAAGA+TGG - chr2.1:53665622-53665641 MS.gene060406:intron 40.0%
AGTAAGGAGAGTAGATCAGA+TGG - chr2.1:53665680-53665699 MS.gene060406:intron 40.0%
AGTATATAGCACCACAAACC+TGG + chr2.1:53667284-53667303 None:intergenic 40.0%
ATAGTGGCAGAGAATTTGTG+TGG + chr2.1:53666308-53666327 None:intergenic 40.0%
ATGATGAACATGATTGCTGG+TGG - chr2.1:53669025-53669044 MS.gene060406:intron 40.0%
ATGGGGTAGTGAATTACTAG+AGG - chr2.1:53665699-53665718 MS.gene060406:intron 40.0%
ATTACCTATCCTCAAGCTGT+TGG - chr2.1:53671097-53671116 MS.gene060406:intron 40.0%
ATTGTCTGCATATGATGCCT+AGG - chr2.1:53667805-53667824 MS.gene060406:CDS 40.0%
CAGAGGTTCGAGAAATATTC+AGG - chr2.1:53668845-53668864 MS.gene060406:CDS 40.0%
CCAGCAATCATGTTCATCAT+AGG + chr2.1:53669025-53669044 None:intergenic 40.0%
CCCAGAAATAATGAGTCCTT+TGG - chr2.1:53670820-53670839 MS.gene060406:intron 40.0%
CCTATGATGAACATGATTGC+TGG - chr2.1:53669022-53669041 MS.gene060406:intron 40.0%
CCTTGAAACCATCATCATGA+AGG + chr2.1:53666557-53666576 None:intergenic 40.0%
CTAAATGCTATCCACCATAG+GGG + chr2.1:53668042-53668061 None:intergenic 40.0%
CTAACTTTCCTAGGAAAGTG+TGG - chr2.1:53671524-53671543 MS.gene060406:CDS 40.0%
CTAATGCTGAAATCTTCTCC+TGG + chr2.1:53669953-53669972 None:intergenic 40.0%
CTGAATCTGATTGGACGTTA+TGG - chr2.1:53665803-53665822 MS.gene060406:CDS 40.0%
CTGTACTTCTTTCCTGTATC+TGG - chr2.1:53670299-53670318 MS.gene060406:CDS 40.0%
CTTGCAACTGAAAAGGAAGA+AGG - chr2.1:53666269-53666288 MS.gene060406:intron 40.0%
GATGTCTCTGTATCTTTGAC+TGG - chr2.1:53666386-53666405 MS.gene060406:intron 40.0%
GCAGAGAATTTGTGTGGATA+TGG + chr2.1:53666302-53666321 None:intergenic 40.0%
GCCAAAGGACTCATTATTTC+TGG + chr2.1:53670824-53670843 None:intergenic 40.0%
GGAAACATTGCGGTGAAAAA+AGG + chr2.1:53666155-53666174 None:intergenic 40.0%
GGGTGGTTTATGATGAATGT+AGG + chr2.1:53670803-53670822 None:intergenic 40.0%
GTAAGGAGAGTAGATCAGAT+GGG - chr2.1:53665681-53665700 MS.gene060406:intron 40.0%
GTAATTTAGCACATCGAAGC+AGG + chr2.1:53671082-53671101 None:intergenic 40.0%
GTCTTTCAGAGTGTATGCTT+CGG + chr2.1:53667892-53667911 None:intergenic 40.0%
GTGATATTGTTGGCATCACA+GGG - chr2.1:53667255-53667274 MS.gene060406:intron 40.0%
TAAATGCTATCCACCATAGG+GGG + chr2.1:53668041-53668060 None:intergenic 40.0%
TAAGGAGAGTAGATCAGATG+GGG - chr2.1:53665682-53665701 MS.gene060406:intron 40.0%
TAATGAGTCCTTTGGCAAAG+TGG - chr2.1:53670828-53670847 MS.gene060406:intron 40.0%
TACTACCTGTGAGTTCTACA+TGG - chr2.1:53669222-53669241 MS.gene060406:intron 40.0%
TAGCGATGAGAAAGAGATTC+GGG + chr2.1:53665137-53665156 None:intergenic 40.0%
TAGTCAAACACCAAGGTAAC+AGG + chr2.1:53667010-53667029 None:intergenic 40.0%
TAGTGAATTACTAGAGGCAG+AGG - chr2.1:53665705-53665724 MS.gene060406:intron 40.0%
TCAAATCCAAATGGCGTAAC+CGG + chr2.1:53668816-53668835 None:intergenic 40.0%
TCTGGAGAAGCTTGATTTCT+TGG - chr2.1:53668903-53668922 MS.gene060406:intron 40.0%
TCTTTCAGAGTGTATGCTTC+GGG + chr2.1:53667891-53667910 None:intergenic 40.0%
TGACATGATTGAAGGACTAG+AGG - chr2.1:53669584-53669603 MS.gene060406:intron 40.0%
TGAGGAAGATATGGATCCAA+CGG - chr2.1:53666120-53666139 MS.gene060406:intron 40.0%
TGAGTTCTACATGGCTTACA+AGG - chr2.1:53669231-53669250 MS.gene060406:intron 40.0%
TGCTTGGTACTAACTTTCCT+AGG - chr2.1:53671515-53671534 MS.gene060406:CDS 40.0%
TGTGCAAAATGTTTCGTCCA+AGG + chr2.1:53671210-53671229 None:intergenic 40.0%
TGTGCATCATTTGTCACTGA+TGG - chr2.1:53669502-53669521 MS.gene060406:intron 40.0%
TTTGCCTGGGCAATTAAACA+AGG + chr2.1:53667733-53667752 None:intergenic 40.0%
! AAATTCAACGATGGTGGTGA+TGG + chr2.1:53665171-53665190 None:intergenic 40.0%
! ACAGCACCACAAAAGTTTTG+GGG + chr2.1:53667782-53667801 None:intergenic 40.0%
! AGACAGCACCACAAAAGTTT+TGG + chr2.1:53667784-53667803 None:intergenic 40.0%
! CGAAACATTTTGCACAGCTT+TGG - chr2.1:53671214-53671233 MS.gene060406:intron 40.0%
! GACAGCACCACAAAAGTTTT+GGG + chr2.1:53667783-53667802 None:intergenic 40.0%
! TCAAGTCTTTGGGAATACTG+AGG + chr2.1:53669620-53669639 None:intergenic 40.0%
! TGGTTTCAAGGTTCAGGTTA+TGG - chr2.1:53666566-53666585 MS.gene060406:intron 40.0%
! TTGTCTCATGAATGGTAACG+AGG + chr2.1:53667518-53667537 None:intergenic 40.0%
!! AAGGACTCATTATTTCTGGG+TGG + chr2.1:53670820-53670839 None:intergenic 40.0%
!! CCTTCATGATGATGGTTTCA+AGG - chr2.1:53666554-53666573 MS.gene060406:intron 40.0%
!! TGATGATGGTTTCAAGGTTC+AGG - chr2.1:53666560-53666579 MS.gene060406:intron 40.0%
!! TTAACAATAGGCTTGGTGGT+TGG - chr2.1:53665903-53665922 MS.gene060406:intron 40.0%
!! TTGTGGTGCTATATACTTCC+AGG - chr2.1:53667287-53667306 MS.gene060406:intron 40.0%
!!! GGGGAGTTACTTTTTGCTTA+TGG + chr2.1:53665116-53665135 None:intergenic 40.0%
!!! TTTTGCACAGCTTTGGAGTA+TGG - chr2.1:53671221-53671240 MS.gene060406:intron 40.0%
AAGTGGCACAGATCAAAACC+AGG - chr2.1:53670845-53670864 MS.gene060406:intron 45.0%
AATCTTTGCCGTTGTACCAC+AGG + chr2.1:53671027-53671046 None:intergenic 45.0%
AATTGGGACACGACATCTTG+AGG + chr2.1:53671438-53671457 None:intergenic 45.0%
AATTTACCTTCCCCCTATGG+TGG - chr2.1:53668028-53668047 MS.gene060406:intron 45.0%
ACATCTTGAGGTTTCATGGC+AGG + chr2.1:53671426-53671445 None:intergenic 45.0%
ACATGAAGGAACCCAGATAC+AGG + chr2.1:53670314-53670333 None:intergenic 45.0%
AGAAAAGAGGAGAAAGGACG+AGG - chr2.1:53665278-53665297 MS.gene060406:intron 45.0%
AGCGATGAGAAAGAGATTCG+GGG + chr2.1:53665136-53665155 None:intergenic 45.0%
AGCTGCTGATGAGGAAGATA+TGG - chr2.1:53666111-53666130 MS.gene060406:intron 45.0%
ATCAGGTGACGATGAAGCAA+TGG - chr2.1:53671184-53671203 MS.gene060406:intron 45.0%
ATCATGCACAAACGTTCCTC+TGG - chr2.1:53666510-53666529 MS.gene060406:intron 45.0%
ATCTTTGCCGTTGTACCACA+GGG + chr2.1:53671026-53671045 None:intergenic 45.0%
ATGCACACAACACACCTGAA+TGG + chr2.1:53669489-53669508 None:intergenic 45.0%
CACCACGCTTCACATTAGAA+TGG + chr2.1:53667238-53667257 None:intergenic 45.0%
CACGACATCTTGAGGTTTCA+TGG + chr2.1:53671430-53671449 None:intergenic 45.0%
CACTGAATTGAATGACCCTG+TGG - chr2.1:53671008-53671027 MS.gene060406:intron 45.0%
CATAGGTGTTTCAACCTGAG+TGG + chr2.1:53669008-53669027 None:intergenic 45.0%
CATCTTGAGGTTTCATGGCA+GGG + chr2.1:53671425-53671444 None:intergenic 45.0%
CTATGAGAATAAAGGGCAGC+TGG - chr2.1:53670139-53670158 MS.gene060406:intron 45.0%
GATTGAAGGACTAGAGGAGA+TGG - chr2.1:53669590-53669609 MS.gene060406:intron 45.0%
GGAGAAGCTTGATTTCTTGG+AGG - chr2.1:53668906-53668925 MS.gene060406:intron 45.0%
GGTGATATTGTTGGCATCAC+AGG - chr2.1:53667254-53667273 MS.gene060406:intron 45.0%
GTAAGCCATGTAGAACTCAC+AGG + chr2.1:53669230-53669249 None:intergenic 45.0%
GTATCAGCAGAGCTCTTAAC+TGG + chr2.1:53670089-53670108 None:intergenic 45.0%
GTCCATTCTAATGTGAAGCG+TGG - chr2.1:53667233-53667252 MS.gene060406:intron 45.0%
GTGAAGCGTGGTGATATTGT+TGG - chr2.1:53667245-53667264 MS.gene060406:intron 45.0%
TAGGCTGCTGAAATGAGAAG+TGG - chr2.1:53666070-53666089 MS.gene060406:intron 45.0%
TCGACTTTACTCCACCATTC+AGG - chr2.1:53669472-53669491 MS.gene060406:intron 45.0%
TGAAACAACTGCGCGTTTGT+TGG - chr2.1:53669707-53669726 MS.gene060406:intron 45.0%
TGAATGACCCTGTGGTACAA+CGG - chr2.1:53671016-53671035 MS.gene060406:intron 45.0%
TGCAATTTACCTTCCCCCTA+TGG - chr2.1:53668025-53668044 MS.gene060406:intron 45.0%
TGCAGCAATACTTGGAGAAC+AGG - chr2.1:53666237-53666256 MS.gene060406:intron 45.0%
TGTTCAGCATCCACAGAGAA+AGG + chr2.1:53668645-53668664 None:intergenic 45.0%
TTAATTGCCCAGGCAAAAGC+AGG - chr2.1:53667736-53667755 MS.gene060406:CDS 45.0%
TTAGGAAGCTGCAACTTGTC+AGG - chr2.1:53668270-53668289 MS.gene060406:intron 45.0%
TTGAGCGGTGAGCATTTACT+AGG - chr2.1:53669289-53669308 MS.gene060406:intron 45.0%
TTTATAGTCAGTGCGCTACC+TGG - chr2.1:53668191-53668210 MS.gene060406:intron 45.0%
! AACAAACGCGCAGTTGTTTC+AGG + chr2.1:53669708-53669727 None:intergenic 45.0%
! AACCTGAGTGGTGGAAAAGT+AGG + chr2.1:53668996-53669015 None:intergenic 45.0%
! AACTGCGCGTTTGTTGGATA+AGG - chr2.1:53669713-53669732 MS.gene060406:intron 45.0%
! AGCATACACTCTGAAAGACC+AGG - chr2.1:53667893-53667912 MS.gene060406:intron 45.0%
! CATTTTCTCCACGCTACATG+GGG + chr2.1:53670714-53670733 None:intergenic 45.0%
! CTCAAGAAGTTGATTGTCGG+TGG - chr2.1:53669127-53669146 MS.gene060406:intron 45.0%
! GCATTTTCTCCACGCTACAT+GGG + chr2.1:53670715-53670734 None:intergenic 45.0%
! TAGATACCGGTTACGCCATT+TGG - chr2.1:53668807-53668826 MS.gene060406:CDS 45.0%
! TCATGCAGATGGTCTTGACA+AGG - chr2.1:53669437-53669456 MS.gene060406:intron 45.0%
! TGCATTTTCTCCACGCTACA+TGG + chr2.1:53670716-53670735 None:intergenic 45.0%
! TGCTGCTGCTGATAATGCAT+GGG - chr2.1:53667845-53667864 MS.gene060406:intron 45.0%
!! TCTGTCCTTTTGGTTACAGG+AGG - chr2.1:53671389-53671408 MS.gene060406:intron 45.0%
!! TTGGACGTTATGGTGTCGTT+TGG - chr2.1:53665813-53665832 MS.gene060406:CDS 45.0%
!! TTAATATGTAAAAAAAAATT+GGG + chr2.1:53666819-53666838 None:intergenic 5.0%
!!! ATAATAATAGTAATTTTTTT+TGG - chr2.1:53671136-53671155 MS.gene060406:intron 5.0%
!!! GTATTTAATTTTTTAAATTT+CGG - chr2.1:53665498-53665517 MS.gene060406:intron 5.0%
!!! TAATGAAAATATATTTTATA+AGG + chr2.1:53666861-53666880 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTAACAAT+AGG - chr2.1:53665891-53665910 MS.gene060406:intron 5.0%
AAAAAGGGGAGTCACACCGT+TGG + chr2.1:53666139-53666158 None:intergenic 50.0%
AAAGACGAGCTTTGCACCAG+AGG + chr2.1:53666529-53666548 None:intergenic 50.0%
AGGTGTTTCAACCTGAGTGG+TGG + chr2.1:53669005-53669024 None:intergenic 50.0%
AGTGTATGCTTCGGGATTCC+TGG + chr2.1:53667883-53667902 None:intergenic 50.0%
ATGGCCAACAGCTTGAGGAT+AGG + chr2.1:53671104-53671123 None:intergenic 50.0%
CAACAATGGGTACCTCGCAT+CGG + chr2.1:53666592-53666611 None:intergenic 50.0%
CACACAACACACCTGAATGG+TGG + chr2.1:53669486-53669505 None:intergenic 50.0%
CTTAACCCACTAAGTGGGGT+CGG + chr2.1:53665848-53665867 None:intergenic 50.0%
GCGATGAGAAAGAGATTCGG+GGG + chr2.1:53665135-53665154 None:intergenic 50.0%
GGACGAGGAAAAAGCCAGAA+AGG - chr2.1:53665293-53665312 MS.gene060406:intron 50.0%
TAACCTGCCCACACTTTCCT+AGG + chr2.1:53671535-53671554 None:intergenic 50.0%
TCAAAACGTTCAGTCAGGCC+TGG + chr2.1:53670866-53670885 None:intergenic 50.0%
TCACAGGGTTTCCAGGTTTG+TGG - chr2.1:53667270-53667289 MS.gene060406:intron 50.0%
TCAGCGCTCGTCAAGTCTTT+GGG + chr2.1:53669630-53669649 None:intergenic 50.0%
TGACGATGAAGCAATGGCCT+TGG - chr2.1:53671190-53671209 MS.gene060406:intron 50.0%
TTCAGCGCTCGTCAAGTCTT+TGG + chr2.1:53669631-53669650 None:intergenic 50.0%
TTTGCTTATGGTTTCGCCCG+CGG + chr2.1:53665104-53665123 None:intergenic 50.0%
! AAACGCGCAGTTGTTTCAGG+AGG + chr2.1:53669705-53669724 None:intergenic 50.0%
! AACGCGCAGTTGTTTCAGGA+GGG + chr2.1:53669704-53669723 None:intergenic 50.0%
! CTGCTGCTGCTGATAATGCA+TGG - chr2.1:53667844-53667863 MS.gene060406:intron 50.0%
! GCAGCAGCAGATTTTTGCCT+AGG + chr2.1:53667825-53667844 None:intergenic 50.0%
! GCTGATAATGCATGGGTACC+AGG - chr2.1:53667852-53667871 MS.gene060406:intron 50.0%
! TAGGAAAGTGTGGGCAGGTT+AGG - chr2.1:53671534-53671553 MS.gene060406:CDS 50.0%
! TATGGTTTGCCACCAACTGC+TGG - chr2.1:53671239-53671258 MS.gene060406:intron 50.0%
! TTTCCTAGGAAAGTGTGGGC+AGG - chr2.1:53671529-53671548 MS.gene060406:CDS 50.0%
! TTTGCCACCAACTGCTGGTT+GGG - chr2.1:53671244-53671263 MS.gene060406:intron 50.0%
!! CACCTACTTTTCCACCACTC+AGG - chr2.1:53668991-53669010 MS.gene060406:intron 50.0%
!! GATCTGTGCCACTTTGCCAA+AGG + chr2.1:53670839-53670858 None:intergenic 50.0%
!! GTTGGGGTTTGGGTATTGAC+CGG - chr2.1:53671261-53671280 MS.gene060406:intron 50.0%
AAACCCCAACCAGCAGTTGG+TGG + chr2.1:53671251-53671270 None:intergenic 55.0%
ACAACCTCCTTCCGATCCTC+CGG - chr2.1:53665066-53665085 MS.gene060406:CDS 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr2.1:53665840-53665859 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr2.1:53665839-53665858 MS.gene060406:CDS 55.0%
CAAACCTGCAGCTGCTGATG+AGG - chr2.1:53666102-53666121 MS.gene060406:intron 55.0%
CATGGGTACCAGGAAAGACC+AGG - chr2.1:53667862-53667881 MS.gene060406:intron 55.0%
GAAGGACTAGAGGAGATGGC+AGG - chr2.1:53669594-53669613 MS.gene060406:intron 55.0%
GCATCTCAGGATCGGCAATC+AGG - chr2.1:53671167-53671186 MS.gene060406:intron 55.0%
GTAGCAAACCCCATGTAGCG+TGG - chr2.1:53670703-53670722 MS.gene060406:intron 55.0%
GTTGGCATCACAGGGTTTCC+AGG - chr2.1:53667263-53667282 MS.gene060406:intron 55.0%
GTTTGCCACCAACTGCTGGT+TGG - chr2.1:53671243-53671262 MS.gene060406:intron 55.0%
TCTTCCTCATCAGCAGCTGC+AGG + chr2.1:53666109-53666128 None:intergenic 55.0%
TGCCCAGGCAAAAGCAGGAA+GGG - chr2.1:53667741-53667760 MS.gene060406:CDS 55.0%
TGCTATCCACCATAGGGGGA+AGG + chr2.1:53668037-53668056 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr2.1:53665840-53665859 MS.gene060406:CDS 55.0%
TTGCCCAGGCAAAAGCAGGA+AGG - chr2.1:53667740-53667759 MS.gene060406:CDS 55.0%
! ACCAACTGCTGGTTGGGGTT+TGG - chr2.1:53671250-53671269 MS.gene060406:intron 55.0%
! ACGCGCAGTTGTTTCAGGAG+GGG + chr2.1:53669703-53669722 None:intergenic 55.0%
! CCAACTGCTGGTTGGGGTTT+GGG - chr2.1:53671251-53671270 MS.gene060406:intron 55.0%
! TCGGGATTCCTGGTCTTTCC+TGG + chr2.1:53667873-53667892 None:intergenic 55.0%
! TTCAGGTTATGGCCGATGCG+AGG - chr2.1:53666577-53666596 MS.gene060406:intron 55.0%
! TTGCCACCAACTGCTGGTTG+GGG - chr2.1:53671245-53671264 MS.gene060406:intron 55.0%
!! GCAGCTTGTGGGGCACTTTT+TGG - chr2.1:53670760-53670779 MS.gene060406:intron 55.0%
!! GCTTGTGGGGCACTTTTTGG+AGG - chr2.1:53670763-53670782 MS.gene060406:intron 55.0%
CCCAAACCCCAACCAGCAGT+TGG + chr2.1:53671254-53671273 None:intergenic 60.0%
CCCAGGCAAAAGCAGGAAGG+GGG - chr2.1:53667743-53667762 MS.gene060406:CDS 60.0%
GCCCAGGCAAAAGCAGGAAG+GGG - chr2.1:53667742-53667761 MS.gene060406:CDS 60.0%
! CGCGCAGTTGTTTCAGGAGG+GGG + chr2.1:53669702-53669721 None:intergenic 60.0%
!! CCCCCTTCCTGCTTTTGCCT+GGG + chr2.1:53667746-53667765 None:intergenic 60.0%
!! TCCCCCTTCCTGCTTTTGCC+TGG + chr2.1:53667747-53667766 None:intergenic 60.0%
CTTATGGTTTCGCCCGCGGC+GGG + chr2.1:53665100-53665119 None:intergenic 65.0%
GCTTATGGTTTCGCCCGCGG+CGG + chr2.1:53665101-53665120 None:intergenic 65.0%
GTGACCGGAGGATCGGAAGG+AGG + chr2.1:53665073-53665092 None:intergenic 65.0%
GCGGTGACCGGAGGATCGGA+AGG + chr2.1:53665076-53665095 None:intergenic 70.0%
GGGAGCGGTGACCGGAGGAT+CGG + chr2.1:53665080-53665099 None:intergenic 70.0%
! GGTTTCGCCCGCGGCGGGAG+CGG + chr2.1:53665095-53665114 None:intergenic 80.0%
! TCCGGTCACCGCTCCCGCCG+CGG - chr2.1:53665084-53665103 MS.gene060406:CDS 80.0%
! CCCGCGGCGGGAGCGGTGAC+CGG + chr2.1:53665088-53665107 None:intergenic 85.0%
! CCGGTCACCGCTCCCGCCGC+GGG - chr2.1:53665085-53665104 MS.gene060406:CDS 85.0%
! GCGGCGGGAGCGGTGACCGG+AGG + chr2.1:53665085-53665104 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 53665061 53671571 53665061 ID=MS.gene060406
chr2.1 mRNA 53665061 53671571 53665061 ID=MS.gene060406.t1;Parent=MS.gene060406
chr2.1 exon 53671507 53671571 53671507 ID=MS.gene060406.t1.exon1;Parent=MS.gene060406.t1
chr2.1 CDS 53671507 53671571 53671507 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53671318 53671393 53671318 ID=MS.gene060406.t1.exon2;Parent=MS.gene060406.t1
chr2.1 CDS 53671318 53671393 53671318 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53670491 53670559 53670491 ID=MS.gene060406.t1.exon3;Parent=MS.gene060406.t1
chr2.1 CDS 53670491 53670559 53670491 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53670225 53670390 53670225 ID=MS.gene060406.t1.exon4;Parent=MS.gene060406.t1
chr2.1 CDS 53670225 53670390 53670225 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53670034 53670127 53670034 ID=MS.gene060406.t1.exon5;Parent=MS.gene060406.t1
chr2.1 CDS 53670034 53670127 53670034 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53669348 53669433 53669348 ID=MS.gene060406.t1.exon6;Parent=MS.gene060406.t1
chr2.1 CDS 53669348 53669433 53669348 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53668784 53668884 53668784 ID=MS.gene060406.t1.exon7;Parent=MS.gene060406.t1
chr2.1 CDS 53668784 53668884 53668784 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53668718 53668753 53668718 ID=MS.gene060406.t1.exon8;Parent=MS.gene060406.t1
chr2.1 CDS 53668718 53668753 53668718 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53667705 53667830 53667705 ID=MS.gene060406.t1.exon9;Parent=MS.gene060406.t1
chr2.1 CDS 53667705 53667830 53667705 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53667337 53667619 53667337 ID=MS.gene060406.t1.exon10;Parent=MS.gene060406.t1
chr2.1 CDS 53667337 53667619 53667337 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53667139 53667238 53667139 ID=MS.gene060406.t1.exon11;Parent=MS.gene060406.t1
chr2.1 CDS 53667139 53667238 53667139 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53666898 53667054 53666898 ID=MS.gene060406.t1.exon12;Parent=MS.gene060406.t1
chr2.1 CDS 53666898 53667054 53666898 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53665725 53665868 53665725 ID=MS.gene060406.t1.exon13;Parent=MS.gene060406.t1
chr2.1 CDS 53665725 53665868 53665725 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53665570 53665638 53665570 ID=MS.gene060406.t1.exon14;Parent=MS.gene060406.t1
chr2.1 CDS 53665570 53665638 53665570 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53665360 53665456 53665360 ID=MS.gene060406.t1.exon15;Parent=MS.gene060406.t1
chr2.1 CDS 53665360 53665456 53665360 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
chr2.1 exon 53665061 53665224 53665061 ID=MS.gene060406.t1.exon16;Parent=MS.gene060406.t1
chr2.1 CDS 53665061 53665224 53665061 ID=cds.MS.gene060406.t1;Parent=MS.gene060406.t1
Gene Sequence

>MS.gene060406

ATGGAACAACCTCCTTCCGATCCTCCGGTCACCGCTCCCGCCGCGGGCGAAACCATAAGCAAAAAGTAACTCCCCCGAATCTCTTTCTCATCGCTAAATCGATTTCACCATCACCACCATCGTTGAATTTCTCCTTTTTTTTTTTTGTTTTAAACTTTTATTGTTAATTTGTTTACAGTGCACTGAAGCGTGAACAAAAGAAAAAGGACAGAGAAGAAGAAAAGAGGAGAAAGGACGAGGAAAAAGCCAGAAAGGTAATTCTCTTATCCATTTATCGAAACCTTCGATTCGTGCTTAAATTTATTCATTGTTTTGTTAAATTTAACTTCTGTGTGATTTTATTCTTTGCATTTTGGTTTCAATTTCTGAAAATTTATTTTATTTTATATGTAACTAAACAATTGATAATCTAACCTTTGATTTGCGGGGAAATTTATGTATTTAATTTTTTAAATTTCGGTTTATAAATTTTTTAGTAGAACTCTGATTTTTGTTATTTGAATATTGATTTCTTTCTGACAATTTTTATTTTATTTTACATATGTAATGTAAACAATTGTTAGGACCTATCCTAGAAAAGATGGTGAAAACTTGATTTAGGGAGAAGATTTGTAAATCTAGTAAGGAGAGTAGATCAGATGGGGTAGTGAATTACTAGAGGCAGAGGAAGACCAAGAAAAACTATAAGAGAAACTACTAAGAAAAAATGTAGAGATTAACGAGTTGGGTAGAGATATGATATCTGAATCTGATTGGACGTTATGGTGTCGTTTGGTCCATGTAGCCGACCCCACTTAGTGGGTTAAGTTTTTCTTTTTTGTTTTTGTTTTTTTTTTTTTTTTTTAACAATAGGCTTGGTGGTTGGTTTTTGTGATGTAAACAATTGATCAATGGTTAAATTTATATATTTAGTTTCTGCATGTTTTGATATAATTTTGTGATTTTATTCTTTCCTTATTGATTTCAATTCCTGAAAATTTATGTTTTATATATAACGTCAATACTTTTTTAGGCTGCTGAAATGAGAAGTGGCAAAGAGAACAAACCTGCAGCTGCTGATGAGGAAGATATGGATCCAACGGTGTGACTCCCCTTTTTTCACCGCAATGTTTCCAACATGTTATTTCTTCTATATAATGTTTGATGAACTGTTTTTTGTTACTTGGGTTGTTTAACTGCAGCAATACTTGGAGAACAGGCTTAAGTATCTTGCAACTGAAAAGGAAGAAGGGAGAAACCCATATCCACACAAATTCTCTGCCACTATTACTATTAGACAATATATCAAGGAATATGAAGGTTTAAGTGACGGGCAACATCGTGACGATGTCTCTGTATCTTTGACTGGTAATCATGAGTTTATTTGTTGATGTTTTTGTTTTTGAATTTAGTGGTTGCTCGTGTTGATATATTTGTTGTTTCTAATATGTTTTCTGTATTTCAGGCAAAATCATGCACAAACGTTCCTCTGGTGCAAAGCTCGTCTTTTATGACCTTCATGATGATGGTTTCAAGGTTCAGGTTATGGCCGATGCGAGGTACCCATTGTTGTTTCCTTCAATTTTACATATGTAGAGATGATGCCGATATAAAATATTGTATTCTATTAAGTTATTAGACCTTCGTTGCTATGTGTTTGCTTTTTGAATAAGCCCAAAATTTAAGCTTAAAAAGGTGATTTTATGATGTGTCTTTTTTTCAAGAATTTTTTCACAATTACATGTATGTTTATGTGAAAAGTTCAAACAGTTTTTCCCCAATTTTTTTTTACATATTAAGGATTTCTTGAAACAGATACCTTATAAAATATATTTTCATTAAGCTTGAAACAAATCCCTTATAAAATATATTTTCATCAAGAATATGCAGAAACAAACAAGTTCTTATTTTAAGATGGGTCTTATTGATTGTAATGTCAAATAACAGCGTTATTTTGAGATTTGACTCCTGTTACCTTGGTGTTTGACTAACATAGAAGTATTTGTTTGGCTTTTTCCAAATTTTCAAGATGTTTTGGCATTTTAATTTTTTCTTGAATGTATTTTTTTCTTCTTATTTTAGAGAATACATTTTTTTTTTTTTAATTCTTTCATGTATAATTTAGCAGGACAGAAACAACTAATGTATCTCTTATGCAGTAAATCGGACTTAAATGAGGCTGGGTTTGACAAAGTCCATTCTAATGTGAAGCGTGGTGATATTGTTGGCATCACAGGGTTTCCAGGTTTGTGGTGCTATATACTTCCAGGACTCTTATTATTTTGTTTAACTTTGTCTTTCTTCCATATGAAGTCTGTAATTCTTTGACATAACAATAAATAAGGACAATAATATTTTTTTATTTTTTTATTTTAGAAATGTATTAACTCTTTGGAAATAGGAGCAAATTAAGTGAAGTCCTATCAGGATAGTTTGCATAGTATTAAACTATTCTATCTTCAGACTGGGAACATGCCTCGTTACCATTCATGAGACAATTGCAAACTATTTTAAGCAGACATATCACTTCAAAGTGTTACTTAGTTTCAAAATTTGGAGGGCATATTAGTTGCAGTTACATTTATTTAAATCCTACTAATTGGGCCAATATTTTTCTATTTGATGTATACTTGGATGTATTCTATTCTATAGCATTACATTCTGAATTATAATATCATTTTAAAGGTTTTCCTTGTTTAATTGCCCAGGCAAAAGCAGGAAGGGGGAGCTTAGTATTTTCCCCAAAACTTTTGTGGTGCTGTCTCATTGTCTGCATATGATGCCTAGGCAAAAATCTGCTGCTGCTGCTGCTGCTGATAATGCATGGGTACCAGGAAAGACCAGGAATCCCGAAGCATACACTCTGAAAGACCAGGTATTATAGCATGAATTGCAGTCTGATAGATGCTTTCACTGCTTTAAGTCTGCCATATACTATCTTAGAGGGTTATAATGAGGAAGATACTATCTTATTAAATGTTGGATTGCAATTTACCTTCCCCCTATGGTGGATAGCATTTAGATTAGGGAATGAATTGAGATATATATTTATTTGTTATCATTCACTTTTTCTTGTGTGCATTGTGTTTTTCTTTTTCAAATTTATAGTTGGTACTTGATGTCCTTATGTGCATTTATTTACCTTGGATTCTTTATAGTCAGTGCGCTACCTGGCTTTTGTTATATATTTAATTTAATTTATTTATATTTTATGCTATAGTTTTGTGAATTTAGGAAGCTGCAACTTGTCAGGTACTTAGTGAAGGATTGATTAAATTGATTTCTTTGAATCATTTATTTGCTTGCAGCTTTCTAACTGCATTACCAAAATGAAAAATTATTACATAGGCTTGCAGTGCTCATACAATCTTTTTGCAAATTAATTTCAACTCAAAATGAAACTAATATATTTAAACTCGAGGCTAAAGTGAATCATACTGTTAAGTAAGTGCGAATTGATATCAAATGACTTTAGCATGGGCCTGTATTGCAATTCTGAAGCTTGCATCTTTATTTTTATGTTCATTTTTTGTGTATTGAAAGATAAGGTGGAACTGTCTCCAGCATTATTCTGCTATGTATAATATACATGTTTTGATAAACCTTTCTCTGTGGATGCTGAACAAAAAGTTATCTTTTGCATTATCAATTGTTTTCTTTCTTTAAAAATGTACATTTCATTTTAGGTACTGATAATAATTTGATTTATTCAATAGATTATCTTCTCTTATTATTTTTTGACTCAATTATCTTTTCTTATAGGAAACTAGATACCGGTTACGCCATTTGGATTTGATGCTTAATACAGAGGTTCGAGAAATATTCAGGACTAGGTCTAAAATCATTTCTTACGTTAGGAGTTTTCTGGAGAAGCTTGATTTCTTGGAGGTTTGTTCTGTACTTTGAGTATCCTTATGTTGGATCCCTGTGATTTCTTTCCTTCCATTCATTCACCTACTTTTCCACCACTCAGGTTGAAACACCTATGATGAACATGATTGCTGGTGGAGCTGCTGCTCGTCCATTCGTAACTCATCATAATGATCTTAACATGAGATTATTCATGAGAATTGCTCCAGAACTCTATCTCAAGAAGTTGATTGTCGGTGGTCTGAACCGTGTTTATGAAATTGGGAAACAATTTAGGAATGAGGGCATAGATTTGACTCATAATCCTGAATTTACTACCTGTGAGTTCTACATGGCTTACAAGGACTACAATGACTTAATGGAGATAACAGAGAACATGTTGAGCGGTGAGCATTTACTAGGTCTTTAATTGTCACGTTATTTCTCTTTCATGTATTTTATTTTAATGTCAAGTCATTACTTTCGTGTTGAAACCATTGAATAGGTATGGTGTATGAACTTACAAAGGGCAGCTATAAAATCAAGTATCATGCAGATGGTCTTGACAAGGACCCTATTGAAATCGACTTTACTCCACCATTCAGGTGTGTTGTGTGCATCATTTGTCACTGATGGTCATTAACATTTCATCATTTTGAAATATTGATTTGGATTGTTTATTATTACAGAAGGATTGACATGATTGAAGGACTAGAGGAGATGGCAGGCCTCAGTATTCCCAAAGACTTGACGAGCGCTGAAGCTAATCAATATCTAAAGGATGCCTGCTTGAAGTACGAAATCAAATGTCCCCCTCCTGAAACAACTGCGCGTTTGTTGGATAAGGTAATATCGTTTTCATTTTCTCCTGGCTTTTGTTTGGGTATAATGTAACTTTTTTTTATTAGTTACCCTTTTATGTAAAACTTGATTATAATTTTTTTTTCCTTGTTACAATAGCACAATTTTTTTGGGCTGTTTATCAATGTCATTTTCTATGTTATTCATATTCTAGAGTTTTAGGTATATGGTTAAGATAATTAACATATTAACATATTAGACCAGGAGAAGATTTCAGCATTAGTTTTCTGTGTTATGTTTGGTAGAATGAAATAGTTATCGATGAGAGGAGGACAAAACCGTAAACAGTTGTCTTTGTAAATGGACAACTAGTATTGCAGTATTTAACTTTGTTTTCCAGTTAAGAGCTCTGCTGATACTAACTAGTCAATGTTATGTAACAAAAATTTCTATGAGAATAAAGGGCAGCTGGTTTATTCAAGCTTAAGCAAGTCTTGTCTACTACTCTTTTGTACTTCTTTTCCTGTTAATGAATTTTATGTGTAGCACTTGCTCTTTTGCCACTAAATATAAGTGGTAATTCAGTTAAAATGTGTGCACTTCTAGTTGCTGTACTTCTTTCCTGTATCTGGGTTCCTTCATGTATCTATCTGTAAGATACATGATTGCTTTCTTCAAGTTATTGCAAAAGCTAGGGTAGAATCAGATAGTGAAACCTTGATAGTTTTTTTTTTTCCTTCGTGAATTTCTTATTTCTCTACTAAGTTAACATGTTTATACCTTTGATATGATTGATTTTTTTTTTTTTTTTGCCCATAACTTTAGTTTTTAATGTTTACTTTTATGTATTAATCAAGTTAGATTTATGATTTAAAAATTAGAGGAAAACCAAATAAAATTTTAAGAATAGACTTGGAGTTGAATGGTCCATCTTTAGATATCATTCATGGCACACTACCAAAAAAAATATATCATTCATGGCAAGAAATTTTTGCATTCTGTGATTCATGAAAGTAGCAAACCCCATGTAGCGTGGAGAAAATGCATTTAATTGTTGTTCTTGTTATATTGCAGCTTGTGGGGCACTTTTTGGAGGAAACATGTGTCAATCCTACATTCATCATAAACCACCCAGAAATAATGAGTCCTTTGGCAAAGTGGCACAGATCAAAACCAGGCCTGACTGAACGTTTTGAATTGTTTATCAACAAACATGAGGTAATATCATGGCTTTAAGTGATTATTCTTTAAAAATTATGAATTCACGCATCTGAATCCTGATCACTGTTTTTGTTACTTTTCAGCTTGCTAACGCGTACACTGAATTGAATGACCCTGTGGTACAACGGCAAAGATTTGCTGATCAACTCAAGGTAATAAGATATGATACCTGCTTCGATGTGCTAAATTACCTATCCTCAAGCTGTTGGCCATATTTTCTATGAAATAATAATAGTAATTTTTTTTGGTTTGTTTTGCATCTCAGGATCGGCAATCAGGTGACGATGAAGCAATGGCCTTGGACGAAACATTTTGCACAGCTTTGGAGTATGGTTTGCCACCAACTGCTGGTTGGGGTTTGGGTATTGACCGGTTGACTATGTTATTGACTGATTCACAAAATATCAAGGTTTGTTCTCTTTTCTCTCTGTCTCTATCAATCTGCATGTTCATTTTTTTTGGAAATATCTTATAATTTTCTGTCCTTTTGGTTACAGGAGGTTCTTCTCTTCCCTGCCATGAAACCTCAAGATGTCGTGTCCCAATTAAATCATTTACAGGTTTGTTCTGCTTCAAGTCAATAAACATGTTTAATCTACATGACTGCTTGGTACTAACTTTCCTAGGAAAGTGTGGGCAGGTTAGGTTCTTGATGAATTAA
Protein sequence

>MS.gene060406.t1

MEQPPSDPPVTAPAAGETISKNALKREQKKKDREEEKRRKDEEKARKAAEMRSGKENKPAAADEEDMDPTQYLENRLKYLATEKEEGRNPYPHKFSATITIRQYIKEYEGLSDGQHRDDVSVSLTGKIMHKRSSGAKLVFYDLHDDGFKVQVMADASKSDLNEAGFDKVHSNVKRGDIVGITGFPGKSRKGELSIFPKTFVVLSHCLHMMPRQKSAAAATRNPEAYTLKDQETRYRLRHLDLMLNTEVREIFRTRSKIISYVRSFLEKLDFLEVETPMMNMIAGGAAARPFVTHHNDLNMRLFMRIAPELYLKKLIVGGLNRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYKDYNDLMEITENMLSGMVYELTKGSYKIKYHADGLDKDPIEIDFTPPFRRIDMIEGLEEMAGLSIPKDLTSAEANQYLKDACLKYEIKCPPPETTARLLDKLVGHFLEETCVNPTFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELANAYTELNDPVVQRQRFADQLKDRQSGDDEAMALDETFCTALEYGLPPTAGWGLGGSSLPCHETSRCRVPIKSFTGLFCFKSINMFNLHDCLVLTFLGKCGQVRFLMN