Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060474.t1 | KEH32095.1 | 100 | 323 | 0 | 0 | 1 | 323 | 1315 | 1637 | 1.40E-180 | 642.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060474.t1 | F4IVL6 | 88.2 | 323 | 38 | 0 | 1 | 323 | 1255 | 1577 | 1.1e-162 | 573.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060474.t1 | A0A072V1U6 | 100.0 | 323 | 0 | 0 | 1 | 323 | 1315 | 1637 | 9.9e-181 | 642.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056301 | MS.gene060474 | 0.812138 | 4.93E-51 | -1.69E-46 |
| MS.gene060474 | MS.gene87760 | 0.804517 | 2.08E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 75 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATGCAGGCCATTCTTTC+TGG | 0.085878 | 8.2:-15428814 | MS.gene060474:intron |
| TGTTCAACAATTGGCCAATT+TGG | 0.168946 | 8.2:+15428123 | None:intergenic |
| AGAAAGGTCCATGGGCTTTC+TGG | 0.271460 | 8.2:+15428053 | None:intergenic |
| AGAAATTTCTCCCTTCCTTC+AGG | 0.296508 | 8.2:+15427841 | None:intergenic |
| GGGTATGTCACTGGCGGCAT+GGG | 0.317065 | 8.2:+15428213 | None:intergenic |
| GGATCTAATCTACTTTCAAT+TGG | 0.331454 | 8.2:-15428673 | MS.gene060474:CDS |
| CTGACACTCCAGAGATAATA+TGG | 0.341468 | 8.2:-15428471 | MS.gene060474:CDS |
| TTGGCAAAACGTAGTGTTCT+TGG | 0.345038 | 8.2:-15428574 | MS.gene060474:CDS |
| ACTTTCTTCTTCGTTGCCTT+TGG | 0.347190 | 8.2:-15428593 | MS.gene060474:CDS |
| AGTACATACAGCAAAGATTC+AGG | 0.376135 | 8.2:+15428541 | None:intergenic |
| AATCATGGCTTTGGGATTGC+GGG | 0.390763 | 8.2:+15428741 | None:intergenic |
| TTGTGAGTCCATATTATCTC+TGG | 0.402051 | 8.2:+15428463 | None:intergenic |
| GAAAGCCTATGAGCGCCTTC+AGG | 0.402401 | 8.2:-15427809 | None:intergenic |
| AATTCTACATGTTCAACAAT+TGG | 0.405712 | 8.2:+15428114 | None:intergenic |
| CACCACCATGAAATGCTTGA+TGG | 0.412045 | 8.2:+15428626 | None:intergenic |
| GAATGCAGGCCATTCTTTCT+GGG | 0.413510 | 8.2:-15428813 | MS.gene060474:intron |
| GTATAGACGAATCATGGCTT+TGG | 0.413522 | 8.2:+15428732 | None:intergenic |
| TATAGACGAATCATGGCTTT+GGG | 0.421893 | 8.2:+15428733 | None:intergenic |
| CATGTCCATCAAGCATTTCA+TGG | 0.423122 | 8.2:-15428631 | MS.gene060474:CDS |
| AGGGTATGTCACTGGCGGCA+TGG | 0.424459 | 8.2:+15428212 | None:intergenic |
| GGCAGCTGCTGCTTTGCTAA+AGG | 0.440037 | 8.2:-15428773 | MS.gene060474:CDS |
| ATTGCTGCCGCAAACGCCGC+TGG | 0.442245 | 8.2:+15428505 | None:intergenic |
| CACATTTCATCTCTCAGCTC+AGG | 0.446231 | 8.2:+15428192 | None:intergenic |
| TGAATCTTTGCTGTATGTAC+TGG | 0.446920 | 8.2:-15428539 | MS.gene060474:CDS |
| TGCAAGCTTCTTCTTCAGAA+AGG | 0.457638 | 8.2:+15428037 | None:intergenic |
| TAGTGGTCCAGCGGCGTTTG+CGG | 0.461608 | 8.2:-15428512 | MS.gene060474:CDS |
| GATCTAATCTACTTTCAATT+GGG | 0.462201 | 8.2:-15428672 | MS.gene060474:CDS |
| GGCAGAAAATCTAATTCGTC+AGG | 0.467489 | 8.2:-15428434 | MS.gene060474:intron |
| AGCGGCGTTTGCGGCAGCAA+TGG | 0.468895 | 8.2:-15428503 | MS.gene060474:CDS |
| CAAGATCCTCGAGATATCCT+TGG | 0.474004 | 8.2:-15428016 | MS.gene060474:CDS |
| CATTCAGATTTAGATGATGC+TGG | 0.483869 | 8.2:-15429146 | None:intergenic |
| GTCTACCTGAAGGCGCTCAT+AGG | 0.488171 | 8.2:+15427804 | None:intergenic |
| GGTATGTCACTGGCGGCATG+GGG | 0.492414 | 8.2:+15428214 | None:intergenic |
| ACTTGGTTCCCCAGAAAGAA+TGG | 0.495021 | 8.2:+15428804 | None:intergenic |
| GCAGCTGCCTCAACAATACT+TGG | 0.512688 | 8.2:+15428787 | None:intergenic |
| TTCTTCTTCAGAAAGGTCCA+TGG | 0.513925 | 8.2:+15428044 | None:intergenic |
| TCTATTACCTGTGCAATATG+TGG | 0.516118 | 8.2:+15429065 | None:intergenic |
| TAATATGGACTCACAAAATG+AGG | 0.518395 | 8.2:-15428456 | MS.gene060474:CDS |
| TATCTCTGGAGTGTCAGAAT+CGG | 0.521637 | 8.2:+15428477 | None:intergenic |
| GCAAAACGTAGTGTTCTTGG+TGG | 0.525514 | 8.2:-15428571 | MS.gene060474:CDS |
| TCTTCTTCAGAAAGGTCCAT+GGG | 0.531199 | 8.2:+15428045 | None:intergenic |
| GTACATACAGCAAAGATTCA+GGG | 0.531919 | 8.2:+15428542 | None:intergenic |
| CTCAGCTCAGGGTATGTCAC+TGG | 0.536401 | 8.2:+15428204 | None:intergenic |
| TGCAGTCATTACTTGTAATG+TGG | 0.538551 | 8.2:-15428089 | MS.gene060474:CDS |
| CTGCTTTCCACATATTGCAC+AGG | 0.541843 | 8.2:-15429072 | MS.gene060474:intron |
| CATGAAATGCTTGATGGACA+TGG | 0.549713 | 8.2:+15428632 | None:intergenic |
| ATTGAAAGTAGATTAGATCC+AGG | 0.553385 | 8.2:+15428676 | None:intergenic |
| GAATCATGGCTTTGGGATTG+CGG | 0.566088 | 8.2:+15428740 | None:intergenic |
| GATCCTCGAGATATCCTTGG+AGG | 0.568182 | 8.2:-15428013 | MS.gene060474:CDS |
| GGTGTCACCGTTATTACCTC+AGG | 0.572542 | 8.2:-15428170 | MS.gene060474:CDS |
| GGTGCTGTATAGACGAATCA+TGG | 0.576535 | 8.2:+15428726 | None:intergenic |
| ATAGGTTCCTGAGGTAATAA+CGG | 0.576646 | 8.2:+15428163 | None:intergenic |
| AGCATTTCATGGTGGTGAAG+AGG | 0.578336 | 8.2:-15428620 | MS.gene060474:CDS |
| GAAAACGAATCTCATCACAT+AGG | 0.596688 | 8.2:+15428145 | None:intergenic |
| ACATTTCATCTCTCAGCTCA+GGG | 0.601986 | 8.2:+15428193 | None:intergenic |
| AATGCAGGCCATTCTTTCTG+GGG | 0.602751 | 8.2:-15428812 | MS.gene060474:intron |
| AGAGTTGACCAGAAAGCCCA+TGG | 0.608824 | 8.2:-15428061 | MS.gene060474:CDS |
| TAGTGCAAAATAAAATGCAC+CGG | 0.608870 | 8.2:+15428705 | None:intergenic |
| TGGGGAACCAAGTATTGTTG+AGG | 0.612177 | 8.2:-15428794 | MS.gene060474:CDS |
| ATCACTAGATACATCCTCCA+AGG | 0.615307 | 8.2:+15427999 | None:intergenic |
| ATGATTCGTCTATACAGCAC+CGG | 0.624788 | 8.2:-15428724 | MS.gene060474:CDS |
| GTATGTCACTGGCGGCATGG+GGG | 0.626026 | 8.2:+15428215 | None:intergenic |
| AATATGGACTCACAAAATGA+GGG | 0.632300 | 8.2:-15428455 | MS.gene060474:CDS |
| GAAGAAATCTTTCGAGACTG+CGG | 0.638338 | 8.2:-15427965 | MS.gene060474:CDS |
| CAATGCTGAGATAGTTTCTG+TGG | 0.649793 | 8.2:+15428258 | None:intergenic |
| AGCTCAGGGTATGTCACTGG+CGG | 0.660455 | 8.2:+15428207 | None:intergenic |
| TCTCATCACATAGGTTCCTG+AGG | 0.663091 | 8.2:+15428154 | None:intergenic |
| GGGCATAGTCATATAAAACA+TGG | 0.672186 | 8.2:+15428235 | None:intergenic |
| CATCCTCCAAGGATATCTCG+AGG | 0.672997 | 8.2:+15428010 | None:intergenic |
| ACTGGAGCGTAGTGGTCCAG+CGG | 0.680460 | 8.2:-15428521 | MS.gene060474:CDS |
| ATGAAATGCTTGATGGACAT+GGG | 0.681287 | 8.2:+15428633 | None:intergenic |
| CTGAGCTGAGAGATGAAATG+TGG | 0.705029 | 8.2:-15428191 | MS.gene060474:CDS |
| CTGTATGTACTGGAGCGTAG+TGG | 0.706182 | 8.2:-15428529 | MS.gene060474:CDS |
| GTCCATCAAGCATTTCATGG+TGG | 0.730617 | 8.2:-15428628 | MS.gene060474:CDS |
| GCAATATGTGGAAAGCAGCG+CGG | 0.753932 | 8.2:+15429077 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTGATTAATAATGATAA+AGG | + | chr8.2:15428027-15428046 | None:intergenic | 15.0% |
| !! | TGAAATGTGATAATATTATT+TGG | - | chr8.2:15428050-15428069 | MS.gene060474:CDS | 15.0% |
| !!! | CCAAATAACTTTTTTTTTTT+GGG | - | chr8.2:15428097-15428116 | MS.gene060474:CDS | 15.0% |
| !!! | TCAAATATTATTTTACTACA+TGG | + | chr8.2:15427928-15427947 | None:intergenic | 15.0% |
| !!! | TCCAAATAACTTTTTTTTTT+TGG | - | chr8.2:15428096-15428115 | MS.gene060474:CDS | 15.0% |
| !! | AATATCATATTAGAAAGTGA+GGG | + | chr8.2:15428599-15428618 | None:intergenic | 20.0% |
| !! | ATATTCTTACGAAAATTGAA+AGG | + | chr8.2:15428573-15428592 | None:intergenic | 20.0% |
| !! | CCCAAAAAAAAAAAGTTATT+TGG | + | chr8.2:15428100-15428119 | None:intergenic | 20.0% |
| !! | TATTCTTACGAAAATTGAAA+GGG | + | chr8.2:15428572-15428591 | None:intergenic | 20.0% |
| !!! | AATAACTTTTTTTTTTTGGG+CGG | - | chr8.2:15428100-15428119 | MS.gene060474:CDS | 20.0% |
| ! | AATTCTACATGTTCAACAAT+TGG | + | chr8.2:15428832-15428851 | None:intergenic | 25.0% |
| ! | CTAATATGATATTCACATCA+TGG | - | chr8.2:15428606-15428625 | MS.gene060474:CDS | 25.0% |
| ! | GAATATCATATTAGAAAGTG+AGG | + | chr8.2:15428600-15428619 | None:intergenic | 25.0% |
| ! | GATCTAATCTACTTTCAATT+GGG | - | chr8.2:15428271-15428290 | MS.gene060474:CDS | 25.0% |
| !! | GACAATATTCTTTTTACTCT+AGG | + | chr8.2:15427842-15427861 | None:intergenic | 25.0% |
| !!! | ATAACTTTTTTTTTTTGGGC+GGG | - | chr8.2:15428101-15428120 | MS.gene060474:CDS | 25.0% |
| AATATGGACTCACAAAATGA+GGG | - | chr8.2:15428488-15428507 | MS.gene060474:CDS | 30.0% | |
| ATGATTGTTTGCTCTTTATC+AGG | - | chr8.2:15428639-15428658 | MS.gene060474:CDS | 30.0% | |
| ATTGAAAGTAGATTAGATCC+AGG | + | chr8.2:15428270-15428289 | None:intergenic | 30.0% | |
| GGATCTAATCTACTTTCAAT+TGG | - | chr8.2:15428270-15428289 | MS.gene060474:CDS | 30.0% | |
| TAATATGGACTCACAAAATG+AGG | - | chr8.2:15428487-15428506 | MS.gene060474:CDS | 30.0% | |
| TAGTGCAAAATAAAATGCAC+CGG | + | chr8.2:15428241-15428260 | None:intergenic | 30.0% | |
| ! | ATGAGATTCGTTTTCCAAAT+TGG | - | chr8.2:15428806-15428825 | MS.gene060474:CDS | 30.0% |
| ! | GATATTTCATCGCAAGTTTT+CGG | + | chr8.2:15429068-15429087 | None:intergenic | 30.0% |
| !! | ATTCTTTTTACTCTAGGAGT+TGG | + | chr8.2:15427836-15427855 | None:intergenic | 30.0% |
| !!! | TAACTTTTTTTTTTTGGGCG+GGG | - | chr8.2:15428102-15428121 | MS.gene060474:CDS | 30.0% |
| AGTACATACAGCAAAGATTC+AGG | + | chr8.2:15428405-15428424 | None:intergenic | 35.0% | |
| ATAGGTTCCTGAGGTAATAA+CGG | + | chr8.2:15428783-15428802 | None:intergenic | 35.0% | |
| GAAAACGAATCTCATCACAT+AGG | + | chr8.2:15428801-15428820 | None:intergenic | 35.0% | |
| GGGCATAGTCATATAAAACA+TGG | + | chr8.2:15428711-15428730 | None:intergenic | 35.0% | |
| GTACATACAGCAAAGATTCA+GGG | + | chr8.2:15428404-15428423 | None:intergenic | 35.0% | |
| TATAGACGAATCATGGCTTT+GGG | + | chr8.2:15428213-15428232 | None:intergenic | 35.0% | |
| TCTATTACCTGTGCAATATG+TGG | + | chr8.2:15427881-15427900 | None:intergenic | 35.0% | |
| TGACAAAAATCCTGAAGGAA+GGG | - | chr8.2:15429092-15429111 | MS.gene060474:CDS | 35.0% | |
| TGCAGTCATTACTTGTAATG+TGG | - | chr8.2:15428854-15428873 | MS.gene060474:intron | 35.0% | |
| TGTTCAACAATTGGCCAATT+TGG | + | chr8.2:15428823-15428842 | None:intergenic | 35.0% | |
| TTGTGAGTCCATATTATCTC+TGG | + | chr8.2:15428483-15428502 | None:intergenic | 35.0% | |
| ! | ATGAAATGCTTGATGGACAT+GGG | + | chr8.2:15428313-15428332 | None:intergenic | 35.0% |
| ! | TGAATCTTTGCTGTATGTAC+TGG | - | chr8.2:15428404-15428423 | MS.gene060474:intron | 35.0% |
| !! | TATTTTGCACTAGCTTATCC+TGG | - | chr8.2:15428249-15428268 | MS.gene060474:CDS | 35.0% |
| !!! | AACTTTTTTTTTTTGGGCGG+GGG | - | chr8.2:15428103-15428122 | MS.gene060474:CDS | 35.0% |
| ACATTTCATCTCTCAGCTCA+GGG | + | chr8.2:15428753-15428772 | None:intergenic | 40.0% | |
| ACTTTCTTCTTCGTTGCCTT+TGG | - | chr8.2:15428350-15428369 | MS.gene060474:intron | 40.0% | |
| AGAAATTTCTCCCTTCCTTC+AGG | + | chr8.2:15429105-15429124 | None:intergenic | 40.0% | |
| ATCACTAGATACATCCTCCA+AGG | + | chr8.2:15428947-15428966 | None:intergenic | 40.0% | |
| ATGATTCGTCTATACAGCAC+CGG | - | chr8.2:15428219-15428238 | MS.gene060474:CDS | 40.0% | |
| CAATGCTGAGATAGTTTCTG+TGG | + | chr8.2:15428688-15428707 | None:intergenic | 40.0% | |
| CATCCTGACAAAAATCCTGA+AGG | - | chr8.2:15429087-15429106 | MS.gene060474:CDS | 40.0% | |
| CATGTCCATCAAGCATTTCA+TGG | - | chr8.2:15428312-15428331 | MS.gene060474:intron | 40.0% | |
| CTGACAAAAATCCTGAAGGA+AGG | - | chr8.2:15429091-15429110 | MS.gene060474:CDS | 40.0% | |
| CTGACACTCCAGAGATAATA+TGG | - | chr8.2:15428472-15428491 | MS.gene060474:CDS | 40.0% | |
| GAAGAAATCTTTCGAGACTG+CGG | - | chr8.2:15428978-15428997 | MS.gene060474:intron | 40.0% | |
| GGCAGAAAATCTAATTCGTC+AGG | - | chr8.2:15428509-15428528 | MS.gene060474:CDS | 40.0% | |
| GTATAGACGAATCATGGCTT+TGG | + | chr8.2:15428214-15428233 | None:intergenic | 40.0% | |
| TCTTCTTCAGAAAGGTCCAT+GGG | + | chr8.2:15428901-15428920 | None:intergenic | 40.0% | |
| TGCAAGCTTCTTCTTCAGAA+AGG | + | chr8.2:15428909-15428928 | None:intergenic | 40.0% | |
| TTCTTCTTCAGAAAGGTCCA+TGG | + | chr8.2:15428902-15428921 | None:intergenic | 40.0% | |
| TTGGCAAAACGTAGTGTTCT+TGG | - | chr8.2:15428369-15428388 | MS.gene060474:intron | 40.0% | |
| ! | AGAACACTACGTTTTGCCAA+AGG | + | chr8.2:15428369-15428388 | None:intergenic | 40.0% |
| ! | CATGAAATGCTTGATGGACA+TGG | + | chr8.2:15428314-15428333 | None:intergenic | 40.0% |
| ! | CTTCCTTCAGGATTTTTGTC+AGG | + | chr8.2:15429093-15429112 | None:intergenic | 40.0% |
| ! | TATCAGGTTTTGCAGCATCT+TGG | - | chr8.2:15428655-15428674 | MS.gene060474:CDS | 40.0% |
| !! | TATCTCTGGAGTGTCAGAAT+CGG | + | chr8.2:15428469-15428488 | None:intergenic | 40.0% |
| AATGCAGGCCATTCTTTCTG+GGG | - | chr8.2:15428131-15428150 | MS.gene060474:CDS | 45.0% | |
| ACTTGGTTCCCCAGAAAGAA+TGG | + | chr8.2:15428142-15428161 | None:intergenic | 45.0% | |
| CAAGATCCTCGAGATATCCT+TGG | - | chr8.2:15428927-15428946 | MS.gene060474:intron | 45.0% | |
| CACATTTCATCTCTCAGCTC+AGG | + | chr8.2:15428754-15428773 | None:intergenic | 45.0% | |
| CACCACCATGAAATGCTTGA+TGG | + | chr8.2:15428320-15428339 | None:intergenic | 45.0% | |
| CTGAGCTGAGAGATGAAATG+TGG | - | chr8.2:15428752-15428771 | MS.gene060474:CDS | 45.0% | |
| CTGCTTTCCACATATTGCAC+AGG | - | chr8.2:15427871-15427890 | MS.gene060474:CDS | 45.0% | |
| GAATGCAGGCCATTCTTTCT+GGG | - | chr8.2:15428130-15428149 | MS.gene060474:CDS | 45.0% | |
| GCAAAACGTAGTGTTCTTGG+TGG | - | chr8.2:15428372-15428391 | MS.gene060474:intron | 45.0% | |
| GTCCATCAAGCATTTCATGG+TGG | - | chr8.2:15428315-15428334 | MS.gene060474:intron | 45.0% | |
| TCTCATCACATAGGTTCCTG+AGG | + | chr8.2:15428792-15428811 | None:intergenic | 45.0% | |
| TGAATGCAGGCCATTCTTTC+TGG | - | chr8.2:15428129-15428148 | MS.gene060474:CDS | 45.0% | |
| ! | AGCATTTCATGGTGGTGAAG+AGG | - | chr8.2:15428323-15428342 | MS.gene060474:intron | 45.0% |
| ! | GGTGCTGTATAGACGAATCA+TGG | + | chr8.2:15428220-15428239 | None:intergenic | 45.0% |
| ! | TGGGGAACCAAGTATTGTTG+AGG | - | chr8.2:15428149-15428168 | MS.gene060474:CDS | 45.0% |
| !! | AATCATGGCTTTGGGATTGC+GGG | + | chr8.2:15428205-15428224 | None:intergenic | 45.0% |
| !! | GAATCATGGCTTTGGGATTG+CGG | + | chr8.2:15428206-15428225 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTGGGCGGGGG+CGG | - | chr8.2:15428106-15428125 | MS.gene060474:CDS | 45.0% |
| AGAAAGGTCCATGGGCTTTC+TGG | + | chr8.2:15428893-15428912 | None:intergenic | 50.0% | |
| AGAGTTGACCAGAAAGCCCA+TGG | - | chr8.2:15428882-15428901 | MS.gene060474:intron | 50.0% | |
| CATCCTCCAAGGATATCTCG+AGG | + | chr8.2:15428936-15428955 | None:intergenic | 50.0% | |
| CTGTATGTACTGGAGCGTAG+TGG | - | chr8.2:15428414-15428433 | MS.gene060474:intron | 50.0% | |
| GATCCTCGAGATATCCTTGG+AGG | - | chr8.2:15428930-15428949 | MS.gene060474:intron | 50.0% | |
| GCAATATGTGGAAAGCAGCG+CGG | + | chr8.2:15427869-15427888 | None:intergenic | 50.0% | |
| GCAGCTGCCTCAACAATACT+TGG | + | chr8.2:15428159-15428178 | None:intergenic | 50.0% | |
| ! | GGTGTCACCGTTATTACCTC+AGG | - | chr8.2:15428773-15428792 | MS.gene060474:CDS | 50.0% |
| AGCTCAGGGTATGTCACTGG+CGG | + | chr8.2:15428739-15428758 | None:intergenic | 55.0% | |
| CTCAGCTCAGGGTATGTCAC+TGG | + | chr8.2:15428742-15428761 | None:intergenic | 55.0% | |
| !! | GGCAGCTGCTGCTTTGCTAA+AGG | - | chr8.2:15428170-15428189 | MS.gene060474:CDS | 55.0% |
| ACTGGAGCGTAGTGGTCCAG+CGG | - | chr8.2:15428422-15428441 | MS.gene060474:intron | 60.0% | |
| AGGGTATGTCACTGGCGGCA+TGG | + | chr8.2:15428734-15428753 | None:intergenic | 60.0% | |
| GGGTATGTCACTGGCGGCAT+GGG | + | chr8.2:15428733-15428752 | None:intergenic | 60.0% | |
| GGTATGTCACTGGCGGCATG+GGG | + | chr8.2:15428732-15428751 | None:intergenic | 60.0% | |
| GTATGTCACTGGCGGCATGG+GGG | + | chr8.2:15428731-15428750 | None:intergenic | 60.0% | |
| TAGTGGTCCAGCGGCGTTTG+CGG | - | chr8.2:15428431-15428450 | MS.gene060474:intron | 60.0% | |
| AGCGGCGTTTGCGGCAGCAA+TGG | - | chr8.2:15428440-15428459 | MS.gene060474:CDS | 65.0% | |
| ATTGCTGCCGCAAACGCCGC+TGG | + | chr8.2:15428441-15428460 | None:intergenic | 65.0% | |
| TGGGCGGGGGCGGTGAATGC+AGG | - | chr8.2:15428116-15428135 | MS.gene060474:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 15427810 | 15429155 | 15427810 | ID=MS.gene060474 |
| chr8.2 | mRNA | 15427810 | 15429155 | 15427810 | ID=MS.gene060474.t1;Parent=MS.gene060474 |
| chr8.2 | exon | 15429073 | 15429155 | 15429073 | ID=MS.gene060474.t1.exon1;Parent=MS.gene060474.t1 |
| chr8.2 | CDS | 15429073 | 15429155 | 15429073 | ID=cds.MS.gene060474.t1;Parent=MS.gene060474.t1 |
| chr8.2 | exon | 15428435 | 15428827 | 15428435 | ID=MS.gene060474.t1.exon2;Parent=MS.gene060474.t1 |
| chr8.2 | CDS | 15428435 | 15428827 | 15428435 | ID=cds.MS.gene060474.t1;Parent=MS.gene060474.t1 |
| chr8.2 | exon | 15427810 | 15428304 | 15427810 | ID=MS.gene060474.t1.exon3;Parent=MS.gene060474.t1 |
| chr8.2 | CDS | 15427810 | 15428304 | 15427810 | ID=cds.MS.gene060474.t1;Parent=MS.gene060474.t1 |
| Gene Sequence |
| Protein sequence |
