Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060945.t1 | KEH38509.1 | 71 | 977 | 66 | 3 | 1 | 760 | 544 | 1520 | 0.00E+00 | 1290.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060945.t1 | Q9T048 | 30.1 | 166 | 113 | 3 | 4 | 167 | 552 | 716 | 2.3e-09 | 65.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060945.t1 | A0A072V8Z2 | 71.0 | 977 | 66 | 3 | 1 | 760 | 544 | 1520 | 0.0e+00 | 1290.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene060945 | MS.gene060947 | 0.892725 | 1.22E-74 | -1.69E-46 |
MS.gene060945 | MS.gene060950 | 0.924099 | 1.11E-89 | -1.69E-46 |
MS.gene060945 | MS.gene56644 | 0.865634 | 5.12E-65 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene060945.t1 | MTR_2g072820 | 69.412 | 850 | 124 | 13 | 1 | 715 | 544 | 1392 | 0.0 | 1068 |
MS.gene060945.t1 | MTR_2g072820 | 61.146 | 157 | 38 | 5 | 620 | 760 | 1371 | 1520 | 2.48e-45 | 176 |
MS.gene060945.t1 | MTR_2g072020 | 60.438 | 685 | 152 | 9 | 2 | 574 | 547 | 1224 | 0.0 | 746 |
MS.gene060945.t1 | MTR_2g072020 | 33.257 | 436 | 236 | 9 | 294 | 682 | 988 | 1415 | 7.93e-47 | 181 |
MS.gene060945.t1 | MTR_2g072020 | 50.968 | 155 | 55 | 3 | 621 | 760 | 1437 | 1585 | 1.74e-34 | 142 |
MS.gene060945.t1 | MTR_2g071890 | 63.243 | 555 | 136 | 7 | 227 | 715 | 845 | 1397 | 0.0 | 649 |
MS.gene060945.t1 | MTR_2g071890 | 38.186 | 783 | 366 | 21 | 1 | 730 | 519 | 1236 | 3.38e-130 | 422 |
MS.gene060945.t1 | MTR_2g071890 | 56.000 | 150 | 45 | 3 | 621 | 755 | 1377 | 1520 | 6.35e-39 | 156 |
MS.gene060945.t1 | MTR_2g072110 | 52.221 | 653 | 183 | 12 | 227 | 760 | 868 | 1510 | 0.0 | 587 |
MS.gene060945.t1 | MTR_2g072110 | 47.005 | 551 | 222 | 12 | 1 | 526 | 546 | 1051 | 7.58e-118 | 388 |
MS.gene060945.t1 | MTR_2g072110 | 57.221 | 547 | 157 | 7 | 227 | 714 | 868 | 1396 | 0.0 | 569 |
MS.gene060945.t1 | MTR_2g072110 | 47.005 | 551 | 222 | 12 | 1 | 526 | 546 | 1051 | 1.27e-117 | 388 |
MS.gene060945.t1 | MTR_2g072110 | 59.483 | 116 | 32 | 1 | 660 | 760 | 1434 | 1549 | 7.41e-35 | 143 |
MS.gene060945.t1 | MTR_2g071980 | 55.826 | 575 | 172 | 8 | 229 | 737 | 850 | 1408 | 0.0 | 566 |
MS.gene060945.t1 | MTR_2g071980 | 36.304 | 763 | 358 | 23 | 1 | 730 | 546 | 1213 | 3.86e-99 | 335 |
MS.gene060945.t1 | MTR_2g071980 | 46.497 | 157 | 60 | 5 | 620 | 760 | 1353 | 1501 | 8.20e-27 | 118 |
MS.gene060945.t1 | MTR_2g072030 | 56.923 | 520 | 165 | 6 | 227 | 689 | 874 | 1391 | 1.42e-167 | 523 |
MS.gene060945.t1 | MTR_2g072030 | 45.109 | 552 | 237 | 9 | 1 | 527 | 549 | 1059 | 3.21e-119 | 392 |
MS.gene060945.t1 | MTR_2g072030 | 70.000 | 90 | 27 | 0 | 671 | 760 | 1468 | 1557 | 1.52e-34 | 142 |
MS.gene060945.t1 | MTR_2g072030 | 28.736 | 348 | 205 | 14 | 229 | 556 | 1195 | 1519 | 1.14e-12 | 72.4 |
MS.gene060945.t1 | MTR_2g072080 | 57.684 | 475 | 168 | 4 | 227 | 682 | 841 | 1301 | 3.01e-163 | 510 |
MS.gene060945.t1 | MTR_2g072080 | 45.699 | 558 | 242 | 11 | 1 | 540 | 515 | 1029 | 3.33e-123 | 402 |
MS.gene060945.t1 | MTR_2g072080 | 43.709 | 151 | 62 | 5 | 627 | 759 | 1328 | 1473 | 2.45e-20 | 97.4 |
MS.gene060945.t1 | MTR_2g071960 | 50.248 | 605 | 178 | 10 | 229 | 737 | 721 | 1298 | 7.41e-163 | 507 |
MS.gene060945.t1 | MTR_2g071960 | 39.254 | 777 | 355 | 23 | 1 | 730 | 397 | 1103 | 3.09e-126 | 409 |
MS.gene060945.t1 | MTR_2g071960 | 46.497 | 157 | 60 | 5 | 620 | 760 | 1243 | 1391 | 9.97e-27 | 117 |
MS.gene060945.t1 | MTR_2g072090 | 53.484 | 531 | 146 | 6 | 229 | 685 | 851 | 1354 | 2.66e-162 | 506 |
MS.gene060945.t1 | MTR_2g072090 | 39.226 | 775 | 354 | 23 | 3 | 730 | 529 | 1233 | 4.69e-126 | 409 |
MS.gene060945.t1 | MTR_2g071850 | 50.248 | 605 | 178 | 10 | 229 | 737 | 851 | 1428 | 3.32e-162 | 508 |
MS.gene060945.t1 | MTR_2g071850 | 38.839 | 775 | 357 | 23 | 3 | 730 | 529 | 1233 | 3.50e-124 | 405 |
MS.gene060945.t1 | MTR_2g071850 | 46.497 | 157 | 60 | 5 | 620 | 760 | 1373 | 1521 | 8.39e-27 | 118 |
MS.gene060945.t1 | MTR_2g071870 | 50.248 | 605 | 178 | 10 | 229 | 737 | 851 | 1428 | 4.81e-162 | 508 |
MS.gene060945.t1 | MTR_2g071870 | 39.226 | 775 | 354 | 23 | 3 | 730 | 529 | 1233 | 4.73e-125 | 408 |
MS.gene060945.t1 | MTR_2g071870 | 45.946 | 148 | 57 | 4 | 622 | 754 | 1376 | 1515 | 1.66e-25 | 114 |
MS.gene060945.t1 | MTR_2g072150 | 55.650 | 469 | 136 | 7 | 227 | 637 | 872 | 1326 | 8.91e-152 | 476 |
MS.gene060945.t1 | MTR_2g072150 | 38.789 | 776 | 347 | 23 | 1 | 723 | 546 | 1246 | 4.12e-122 | 397 |
MS.gene060945.t1 | MTR_2g071860 | 49.320 | 515 | 186 | 8 | 227 | 682 | 410 | 908 | 1.22e-135 | 431 |
MS.gene060945.t1 | MTR_2g071860 | 39.922 | 769 | 347 | 21 | 1 | 723 | 84 | 783 | 2.16e-130 | 416 |
MS.gene060945.t1 | MTR_2g071860 | 43.151 | 146 | 60 | 5 | 627 | 754 | 935 | 1075 | 1.44e-18 | 91.3 |
MS.gene060945.t1 | MTR_2g071860 | 28.065 | 367 | 203 | 16 | 221 | 556 | 705 | 1041 | 5.06e-13 | 73.6 |
MS.gene060945.t1 | MTR_2g071900 | 49.402 | 502 | 203 | 10 | 3 | 500 | 525 | 979 | 1.31e-125 | 400 |
MS.gene060945.t1 | MTR_2g071900 | 55.135 | 185 | 61 | 3 | 229 | 407 | 847 | 1015 | 3.94e-45 | 175 |
MS.gene060945.t1 | MTR_2g071940 | 50.000 | 488 | 195 | 9 | 3 | 488 | 529 | 969 | 1.64e-125 | 399 |
MS.gene060945.t1 | MTR_2g071950 | 78.947 | 228 | 48 | 0 | 1 | 228 | 84 | 311 | 7.71e-121 | 367 |
MS.gene060945.t1 | MTR_2g071920 | 77.778 | 225 | 50 | 0 | 1 | 225 | 63 | 287 | 7.19e-116 | 352 |
MS.gene060945.t1 | MTR_2g071910 | 77.193 | 228 | 52 | 0 | 1 | 228 | 214 | 441 | 1.61e-114 | 355 |
MS.gene060945.t1 | MTR_2g071970 | 77.193 | 228 | 52 | 0 | 1 | 228 | 214 | 441 | 1.61e-114 | 355 |
MS.gene060945.t1 | MTR_2g071880 | 80.660 | 212 | 41 | 0 | 1 | 212 | 187 | 398 | 5.06e-103 | 327 |
MS.gene060945.t1 | MTR_1g044020 | 34.126 | 715 | 375 | 21 | 41 | 682 | 423 | 1114 | 1.31e-95 | 327 |
MS.gene060945.t1 | MTR_1g044020 | 28.926 | 484 | 278 | 13 | 226 | 678 | 1181 | 1629 | 1.22e-43 | 171 |
MS.gene060945.t1 | MTR_1g044020 | 30.545 | 514 | 285 | 18 | 226 | 712 | 2205 | 2673 | 1.71e-43 | 171 |
MS.gene060945.t1 | MTR_1g044020 | 28.118 | 473 | 281 | 13 | 227 | 678 | 1701 | 2135 | 5.91e-37 | 150 |
MS.gene060945.t1 | MTR_1g044020 | 24.738 | 477 | 261 | 16 | 302 | 751 | 1896 | 2301 | 3.41e-15 | 80.9 |
MS.gene060945.t1 | MTR_1g044020 | 25.918 | 463 | 263 | 20 | 313 | 748 | 862 | 1271 | 1.08e-13 | 75.9 |
MS.gene060945.t1 | MTR_1g037010 | 31.774 | 919 | 439 | 32 | 1 | 748 | 545 | 1446 | 6.03e-93 | 319 |
MS.gene060945.t1 | MTR_1g037010 | 30.426 | 493 | 281 | 17 | 245 | 712 | 1369 | 1824 | 2.50e-44 | 173 |
MS.gene060945.t1 | MTR_1g037250 | 31.006 | 845 | 455 | 28 | 1 | 748 | 551 | 1364 | 5.59e-88 | 304 |
MS.gene060945.t1 | MTR_1g037250 | 30.285 | 492 | 286 | 14 | 245 | 712 | 1287 | 1745 | 8.51e-46 | 177 |
MS.gene060945.t1 | MTR_3g013790 | 31.000 | 800 | 429 | 27 | 2 | 749 | 538 | 1266 | 3.78e-82 | 286 |
MS.gene060945.t1 | MTR_3g013790 | 32.136 | 557 | 306 | 14 | 2 | 538 | 538 | 1042 | 9.46e-62 | 225 |
MS.gene060945.t1 | MTR_1g037130 | 28.358 | 670 | 321 | 23 | 226 | 748 | 863 | 1520 | 1.03e-54 | 205 |
MS.gene060945.t1 | MTR_1g037130 | 27.771 | 767 | 428 | 26 | 1 | 732 | 545 | 1220 | 1.59e-51 | 195 |
MS.gene060945.t1 | MTR_1g037130 | 30.144 | 418 | 231 | 10 | 315 | 682 | 1657 | 2063 | 2.96e-40 | 160 |
MS.gene060945.t1 | MTR_1g037130 | 23.573 | 543 | 325 | 21 | 226 | 717 | 1430 | 1933 | 3.65e-15 | 80.5 |
MS.gene060945.t1 | MTR_1g037130 | 24.330 | 448 | 283 | 17 | 313 | 748 | 1817 | 2220 | 3.09e-14 | 77.8 |
MS.gene060945.t1 | MTR_6g464050 | 27.357 | 753 | 443 | 23 | 1 | 717 | 1162 | 1846 | 9.51e-52 | 196 |
MS.gene060945.t1 | MTR_6g464050 | 23.729 | 472 | 261 | 17 | 313 | 748 | 1730 | 2138 | 1.00e-12 | 72.8 |
MS.gene060945.t1 | MTR_0068s0080 | 28.178 | 763 | 425 | 26 | 1 | 717 | 542 | 1227 | 1.33e-51 | 196 |
MS.gene060945.t1 | MTR_0068s0080 | 31.323 | 514 | 284 | 15 | 226 | 682 | 860 | 1361 | 5.90e-47 | 181 |
MS.gene060945.t1 | MTR_0006s0230 | 28.806 | 670 | 318 | 24 | 226 | 748 | 834 | 1491 | 5.41e-51 | 194 |
MS.gene060945.t1 | MTR_0006s0230 | 29.088 | 636 | 345 | 20 | 1 | 559 | 516 | 1122 | 6.20e-47 | 181 |
MS.gene060945.t1 | MTR_0006s0230 | 30.144 | 418 | 231 | 10 | 315 | 682 | 1628 | 2034 | 4.36e-40 | 160 |
MS.gene060945.t1 | MTR_0006s0230 | 23.573 | 543 | 325 | 21 | 226 | 717 | 1401 | 1904 | 2.82e-15 | 80.9 |
MS.gene060945.t1 | MTR_0006s0230 | 24.330 | 448 | 283 | 17 | 313 | 748 | 1788 | 2191 | 9.86e-15 | 79.3 |
MS.gene060945.t1 | MTR_2g089975 | 28.026 | 760 | 430 | 24 | 1 | 717 | 545 | 1230 | 6.53e-51 | 194 |
MS.gene060945.t1 | MTR_2g089975 | 30.042 | 476 | 285 | 12 | 226 | 678 | 1431 | 1881 | 1.64e-47 | 183 |
MS.gene060945.t1 | MTR_2g089975 | 29.609 | 537 | 308 | 16 | 226 | 706 | 863 | 1385 | 7.09e-44 | 172 |
MS.gene060945.t1 | MTR_2g089975 | 29.191 | 507 | 293 | 13 | 243 | 719 | 1965 | 2435 | 2.15e-43 | 171 |
MS.gene060945.t1 | MTR_2g089975 | 29.691 | 485 | 269 | 15 | 245 | 712 | 2512 | 2941 | 2.71e-43 | 170 |
MS.gene060945.t1 | MTR_2g089975 | 23.889 | 540 | 306 | 19 | 290 | 748 | 1006 | 1521 | 9.35e-14 | 76.3 |
MS.gene060945.t1 | MTR_1g036800 | 27.406 | 748 | 451 | 21 | 1 | 717 | 542 | 1228 | 1.01e-50 | 192 |
MS.gene060945.t1 | MTR_1g036800 | 31.335 | 517 | 280 | 16 | 226 | 682 | 861 | 1362 | 5.49e-45 | 175 |
MS.gene060945.t1 | MTR_1g442750 | 29.951 | 611 | 338 | 21 | 1 | 585 | 510 | 1056 | 1.10e-50 | 193 |
MS.gene060945.t1 | MTR_1g442750 | 29.725 | 545 | 317 | 21 | 226 | 750 | 1365 | 1863 | 2.52e-47 | 182 |
MS.gene060945.t1 | MTR_1g442750 | 31.294 | 425 | 228 | 11 | 292 | 712 | 1864 | 2228 | 1.25e-41 | 165 |
MS.gene060945.t1 | MTR_1g442750 | 28.350 | 515 | 266 | 17 | 226 | 682 | 829 | 1298 | 1.50e-32 | 136 |
MS.gene060945.t1 | MTR_0068s0080 | 27.850 | 772 | 425 | 27 | 1 | 717 | 542 | 1236 | 1.72e-49 | 189 |
MS.gene060945.t1 | MTR_0068s0080 | 28.947 | 532 | 282 | 19 | 226 | 682 | 860 | 1370 | 1.75e-35 | 145 |
MS.gene060945.t1 | MTR_1g050402 | 26.562 | 768 | 471 | 24 | 1 | 735 | 563 | 1270 | 8.33e-49 | 187 |
MS.gene060945.t1 | MTR_1g050402 | 28.546 | 557 | 303 | 18 | 226 | 718 | 881 | 1406 | 1.94e-34 | 142 |
MS.gene060945.t1 | MTR_1g050402 | 27.451 | 561 | 317 | 20 | 198 | 732 | 1424 | 1920 | 9.67e-27 | 118 |
MS.gene060945.t1 | MTR_1g036880 | 28.367 | 490 | 281 | 13 | 297 | 757 | 38 | 486 | 2.60e-48 | 178 |
MS.gene060945.t1 | MTR_8g059345 | 31.115 | 511 | 285 | 14 | 226 | 682 | 861 | 1358 | 6.96e-48 | 184 |
MS.gene060945.t1 | MTR_8g059345 | 26.753 | 770 | 427 | 26 | 1 | 717 | 543 | 1228 | 4.31e-44 | 172 |
MS.gene060945.t1 | MTR_0069s0080 | 27.731 | 595 | 320 | 14 | 226 | 750 | 956 | 1510 | 3.58e-47 | 182 |
MS.gene060945.t1 | MTR_0069s0080 | 28.675 | 415 | 244 | 8 | 291 | 692 | 11 | 386 | 4.98e-39 | 157 |
MS.gene060945.t1 | MTR_0069s0080 | 31.804 | 327 | 205 | 5 | 390 | 712 | 596 | 908 | 1.13e-36 | 149 |
MS.gene060945.t1 | MTR_1g036750 | 29.088 | 636 | 345 | 20 | 1 | 559 | 516 | 1122 | 7.85e-47 | 181 |
MS.gene060945.t1 | MTR_1g036750 | 31.262 | 515 | 282 | 15 | 226 | 682 | 834 | 1334 | 7.92e-47 | 181 |
MS.gene060945.t1 | MTR_1g036750 | 28.373 | 504 | 300 | 12 | 245 | 719 | 1414 | 1885 | 7.05e-45 | 175 |
MS.gene060945.t1 | MTR_1g036750 | 27.485 | 513 | 302 | 12 | 227 | 712 | 1923 | 2392 | 5.43e-43 | 169 |
MS.gene060945.t1 | MTR_6g463150 | 28.489 | 523 | 284 | 15 | 245 | 749 | 1436 | 1886 | 9.47e-46 | 177 |
MS.gene060945.t1 | MTR_6g463150 | 26.364 | 770 | 434 | 27 | 1 | 732 | 543 | 1217 | 1.96e-44 | 174 |
MS.gene060945.t1 | MTR_6g463150 | 30.214 | 513 | 286 | 15 | 233 | 691 | 869 | 1363 | 2.13e-43 | 170 |
MS.gene060945.t1 | MTR_0006s0240 | 27.150 | 593 | 362 | 20 | 198 | 750 | 1371 | 1933 | 1.40e-45 | 177 |
MS.gene060945.t1 | MTR_0006s0240 | 27.992 | 518 | 293 | 14 | 227 | 712 | 1843 | 2312 | 3.74e-43 | 170 |
MS.gene060945.t1 | MTR_0006s0240 | 27.415 | 766 | 427 | 27 | 1 | 717 | 512 | 1197 | 6.10e-43 | 169 |
MS.gene060945.t1 | MTR_0006s0240 | 29.787 | 517 | 288 | 16 | 226 | 682 | 830 | 1331 | 3.04e-39 | 157 |
MS.gene060945.t1 | MTR_1g041550 | 29.843 | 573 | 283 | 19 | 1 | 490 | 546 | 1082 | 1.67e-45 | 177 |
MS.gene060945.t1 | MTR_1g041550 | 28.431 | 510 | 301 | 12 | 227 | 712 | 1940 | 2409 | 2.01e-44 | 174 |
MS.gene060945.t1 | MTR_1g041550 | 28.908 | 467 | 290 | 11 | 245 | 689 | 1431 | 1877 | 4.71e-44 | 172 |
MS.gene060945.t1 | MTR_1g041550 | 28.225 | 659 | 323 | 25 | 226 | 748 | 864 | 1508 | 4.86e-40 | 160 |
MS.gene060945.t1 | MTR_0069s0040 | 26.753 | 770 | 427 | 25 | 1 | 717 | 545 | 1230 | 1.08e-44 | 174 |
MS.gene060945.t1 | MTR_0069s0040 | 30.739 | 514 | 283 | 15 | 228 | 682 | 866 | 1365 | 3.91e-44 | 172 |
MS.gene060945.t1 | MTR_0069s0040 | 23.640 | 478 | 258 | 20 | 311 | 748 | 1112 | 1522 | 3.78e-13 | 73.9 |
MS.gene060945.t1 | MTR_1g051585 | 30.485 | 515 | 288 | 15 | 226 | 682 | 863 | 1365 | 1.23e-44 | 174 |
MS.gene060945.t1 | MTR_1g051585 | 26.330 | 752 | 453 | 22 | 1 | 717 | 545 | 1230 | 2.02e-43 | 170 |
MS.gene060945.t1 | MTR_1g051585 | 29.574 | 399 | 232 | 9 | 292 | 682 | 1509 | 1866 | 2.36e-39 | 158 |
MS.gene060945.t1 | MTR_1g051585 | 23.861 | 461 | 294 | 18 | 302 | 748 | 1606 | 2023 | 2.26e-14 | 78.2 |
MS.gene060945.t1 | MTR_8g059275 | 28.660 | 485 | 297 | 11 | 227 | 689 | 970 | 1427 | 2.83e-44 | 173 |
MS.gene060945.t1 | MTR_8g059275 | 28.261 | 506 | 300 | 11 | 227 | 712 | 1490 | 1952 | 4.37e-43 | 169 |
MS.gene060945.t1 | MTR_8g059275 | 28.539 | 438 | 268 | 9 | 227 | 644 | 450 | 862 | 5.48e-40 | 160 |
MS.gene060945.t1 | MTR_8g059275 | 29.942 | 344 | 220 | 5 | 354 | 689 | 57 | 387 | 1.75e-37 | 152 |
MS.gene060945.t1 | MTR_8g059275 | 23.887 | 494 | 260 | 21 | 302 | 750 | 1158 | 1580 | 8.19e-11 | 66.6 |
MS.gene060945.t1 | MTR_8g059275 | 28.660 | 485 | 297 | 11 | 227 | 689 | 450 | 907 | 3.42e-44 | 173 |
MS.gene060945.t1 | MTR_8g059275 | 28.660 | 485 | 297 | 11 | 227 | 689 | 1362 | 1819 | 3.42e-44 | 173 |
MS.gene060945.t1 | MTR_8g059275 | 28.150 | 508 | 302 | 11 | 227 | 714 | 1882 | 2346 | 5.35e-43 | 169 |
MS.gene060945.t1 | MTR_8g059275 | 28.029 | 421 | 268 | 7 | 231 | 644 | 862 | 1254 | 1.20e-37 | 152 |
MS.gene060945.t1 | MTR_8g059275 | 29.942 | 344 | 220 | 5 | 354 | 689 | 57 | 387 | 1.71e-37 | 152 |
MS.gene060945.t1 | MTR_8g059275 | 28.660 | 485 | 297 | 11 | 227 | 689 | 450 | 907 | 3.64e-44 | 172 |
MS.gene060945.t1 | MTR_8g059275 | 28.261 | 506 | 300 | 11 | 227 | 712 | 1362 | 1824 | 5.13e-43 | 169 |
MS.gene060945.t1 | MTR_8g059275 | 28.205 | 468 | 297 | 9 | 231 | 689 | 862 | 1299 | 5.45e-42 | 166 |
MS.gene060945.t1 | MTR_8g059275 | 29.942 | 344 | 220 | 5 | 354 | 689 | 57 | 387 | 1.66e-37 | 152 |
MS.gene060945.t1 | MTR_6g464030 | 30.372 | 484 | 267 | 14 | 245 | 712 | 322 | 751 | 3.80e-44 | 171 |
MS.gene060945.t1 | MTR_6g464030 | 31.222 | 221 | 142 | 3 | 477 | 689 | 1 | 219 | 1.71e-24 | 110 |
MS.gene060945.t1 | MTR_1g037150 | 26.981 | 593 | 363 | 20 | 198 | 750 | 1392 | 1954 | 4.73e-44 | 172 |
MS.gene060945.t1 | MTR_1g037150 | 27.546 | 766 | 426 | 27 | 1 | 717 | 533 | 1218 | 6.07e-44 | 172 |
MS.gene060945.t1 | MTR_1g037150 | 29.787 | 517 | 288 | 16 | 226 | 682 | 851 | 1352 | 1.72e-39 | 158 |
MS.gene060945.t1 | MTR_0006s0080 | 28.200 | 539 | 323 | 16 | 198 | 712 | 1227 | 1725 | 1.17e-43 | 171 |
MS.gene060945.t1 | MTR_0006s0080 | 28.230 | 418 | 243 | 9 | 315 | 682 | 777 | 1187 | 1.93e-35 | 145 |
MS.gene060945.t1 | MTR_0006s0080 | 23.718 | 468 | 281 | 17 | 311 | 754 | 935 | 1350 | 1.12e-12 | 72.4 |
MS.gene060945.t1 | MTR_8g059385 | 30.244 | 410 | 234 | 11 | 296 | 694 | 9 | 377 | 1.32e-43 | 162 |
MS.gene060945.t1 | MTR_8g059275 | 28.261 | 506 | 300 | 11 | 227 | 712 | 1494 | 1956 | 3.86e-43 | 169 |
MS.gene060945.t1 | MTR_8g059275 | 28.630 | 489 | 296 | 12 | 227 | 689 | 970 | 1431 | 6.65e-43 | 169 |
MS.gene060945.t1 | MTR_8g059275 | 28.539 | 438 | 268 | 9 | 227 | 644 | 450 | 862 | 4.80e-40 | 160 |
MS.gene060945.t1 | MTR_8g059275 | 29.942 | 344 | 220 | 5 | 354 | 689 | 57 | 387 | 1.62e-37 | 152 |
MS.gene060945.t1 | MTR_0006s0250 | 30.649 | 385 | 237 | 11 | 391 | 750 | 72 | 451 | 8.81e-43 | 162 |
MS.gene060945.t1 | MTR_0012s0150 | 30.485 | 515 | 287 | 15 | 226 | 682 | 612 | 1113 | 2.17e-42 | 167 |
MS.gene060945.t1 | MTR_0012s0150 | 26.350 | 759 | 442 | 24 | 1 | 717 | 296 | 979 | 3.85e-40 | 160 |
MS.gene060945.t1 | MTR_0012s0150 | 28.214 | 280 | 166 | 9 | 245 | 510 | 1193 | 1451 | 1.21e-20 | 98.2 |
MS.gene060945.t1 | MTR_0006s0160 | 29.833 | 419 | 254 | 10 | 245 | 641 | 507 | 907 | 1.64e-41 | 163 |
MS.gene060945.t1 | MTR_0006s0160 | 28.979 | 421 | 226 | 11 | 315 | 682 | 27 | 427 | 7.27e-38 | 152 |
MS.gene060945.t1 | MTR_1g036820 | 30.093 | 432 | 262 | 13 | 344 | 750 | 47 | 463 | 2.40e-41 | 162 |
MS.gene060945.t1 | MTR_1g051625 | 29.060 | 351 | 226 | 4 | 342 | 682 | 30 | 367 | 3.73e-41 | 162 |
MS.gene060945.t1 | MTR_1g051625 | 29.375 | 480 | 279 | 13 | 239 | 689 | 443 | 891 | 1.84e-40 | 160 |
MS.gene060945.t1 | MTR_1g051625 | 23.671 | 583 | 320 | 26 | 243 | 757 | 529 | 1054 | 8.83e-11 | 66.2 |
MS.gene060945.t1 | MTR_0406s0030 | 27.848 | 553 | 316 | 16 | 1 | 527 | 470 | 965 | 1.01e-40 | 161 |
MS.gene060945.t1 | MTR_0406s0030 | 32.550 | 298 | 159 | 12 | 227 | 497 | 789 | 1071 | 3.11e-23 | 106 |
MS.gene060945.t1 | MTR_0460s0010 | 29.695 | 394 | 228 | 9 | 297 | 682 | 1 | 353 | 1.16e-40 | 160 |
MS.gene060945.t1 | MTR_0460s0010 | 28.986 | 345 | 207 | 10 | 226 | 556 | 420 | 740 | 5.25e-32 | 133 |
MS.gene060945.t1 | MTR_0460s0010 | 23.861 | 461 | 294 | 18 | 302 | 748 | 93 | 510 | 9.83e-15 | 78.6 |
MS.gene060945.t1 | MTR_1514s0010 | 42.795 | 229 | 122 | 5 | 1 | 228 | 311 | 531 | 8.51e-40 | 155 |
MS.gene060945.t1 | MTR_4g025470 | 26.562 | 640 | 339 | 16 | 226 | 749 | 847 | 1471 | 2.07e-38 | 155 |
MS.gene060945.t1 | MTR_4g025470 | 24.223 | 772 | 428 | 31 | 1 | 717 | 534 | 1203 | 2.28e-23 | 107 |
MS.gene060945.t1 | MTR_2g072100 | 69.697 | 99 | 30 | 0 | 574 | 672 | 142 | 240 | 8.19e-37 | 139 |
MS.gene060945.t1 | MTR_0006s0300 | 29.398 | 415 | 228 | 9 | 328 | 682 | 3 | 412 | 2.60e-36 | 145 |
MS.gene060945.t1 | MTR_8g028520 | 27.510 | 498 | 308 | 11 | 33 | 522 | 596 | 1048 | 3.09e-36 | 148 |
MS.gene060945.t1 | MTR_8g028520 | 26.869 | 428 | 243 | 13 | 283 | 674 | 934 | 1327 | 3.96e-25 | 112 |
MS.gene060945.t1 | MTR_8g028520 | 27.154 | 383 | 221 | 14 | 215 | 568 | 1384 | 1737 | 2.17e-21 | 100 |
MS.gene060945.t1 | MTR_8g059395 | 30.612 | 343 | 190 | 8 | 391 | 719 | 2 | 310 | 1.95e-34 | 135 |
MS.gene060945.t1 | MTR_4g025430 | 28.511 | 470 | 269 | 13 | 226 | 647 | 807 | 1257 | 1.00e-33 | 140 |
MS.gene060945.t1 | MTR_4g025430 | 26.336 | 767 | 425 | 37 | 1 | 717 | 494 | 1170 | 3.51e-26 | 116 |
MS.gene060945.t1 | MTR_1g050395 | 29.560 | 477 | 285 | 15 | 226 | 678 | 128 | 577 | 2.34e-33 | 137 |
MS.gene060945.t1 | MTR_8g028500 | 29.974 | 387 | 205 | 11 | 226 | 555 | 840 | 1217 | 2.64e-33 | 139 |
MS.gene060945.t1 | MTR_8g028500 | 25.606 | 660 | 346 | 26 | 204 | 750 | 1381 | 2008 | 3.49e-23 | 106 |
MS.gene060945.t1 | MTR_8g028500 | 25.500 | 400 | 228 | 11 | 202 | 556 | 1889 | 2263 | 3.63e-22 | 103 |
MS.gene060945.t1 | MTR_8g028500 | 22.446 | 744 | 417 | 29 | 47 | 726 | 575 | 1222 | 5.02e-13 | 73.6 |
MS.gene060945.t1 | MTR_1g006975 | 25.305 | 573 | 339 | 16 | 1 | 549 | 558 | 1065 | 2.53e-30 | 129 |
MS.gene060945.t1 | MTR_1g036870 | 43.316 | 187 | 97 | 5 | 44 | 228 | 4 | 183 | 3.65e-30 | 125 |
MS.gene060945.t1 | MTR_8g059405 | 31.273 | 275 | 149 | 3 | 425 | 685 | 129 | 377 | 6.06e-30 | 123 |
MS.gene060945.t1 | MTR_1g036520 | 28.233 | 464 | 285 | 13 | 226 | 658 | 442 | 888 | 1.24e-29 | 126 |
MS.gene060945.t1 | MTR_8g059325 | 31.414 | 191 | 120 | 2 | 344 | 534 | 22 | 201 | 1.14e-27 | 111 |
MS.gene060945.t1 | MTR_2g071930 | 57.282 | 103 | 34 | 2 | 227 | 329 | 2 | 94 | 1.96e-27 | 108 |
MS.gene060945.t1 | MTR_2g071930 | 65.517 | 58 | 20 | 0 | 494 | 551 | 94 | 151 | 6.38e-18 | 81.6 |
MS.gene060945.t1 | MTR_0006s0290 | 26.261 | 476 | 247 | 14 | 293 | 750 | 10 | 399 | 1.06e-26 | 114 |
MS.gene060945.t1 | MTR_7g088640 | 25.133 | 565 | 348 | 15 | 1 | 549 | 558 | 1063 | 1.21e-25 | 114 |
MS.gene060945.t1 | MTR_7g088640 | 24.000 | 625 | 329 | 24 | 244 | 750 | 1229 | 1825 | 4.61e-16 | 83.6 |
MS.gene060945.t1 | MTR_0006s0020 | 27.574 | 272 | 166 | 7 | 506 | 749 | 4 | 272 | 1.57e-23 | 102 |
MS.gene060945.t1 | MTR_7g088290 | 26.740 | 546 | 328 | 19 | 30 | 550 | 586 | 1084 | 3.06e-22 | 103 |
MS.gene060945.t1 | MTR_7g088290 | 25.846 | 325 | 200 | 11 | 226 | 536 | 1325 | 1622 | 5.52e-12 | 70.1 |
MS.gene060945.t1 | MTR_7g088650 | 25.059 | 427 | 268 | 13 | 1 | 406 | 303 | 698 | 3.31e-22 | 103 |
MS.gene060945.t1 | MTR_7g088650 | 26.923 | 208 | 137 | 5 | 362 | 559 | 530 | 732 | 8.68e-11 | 66.2 |
MS.gene060945.t1 | MTR_1g044095 | 29.132 | 357 | 173 | 11 | 211 | 532 | 773 | 1084 | 7.15e-22 | 102 |
MS.gene060945.t1 | MTR_1g044095 | 21.491 | 805 | 404 | 28 | 64 | 754 | 194 | 884 | 3.84e-15 | 80.5 |
MS.gene060945.t1 | MTR_1g044095 | 26.055 | 403 | 240 | 18 | 358 | 729 | 121 | 496 | 1.14e-12 | 72.4 |
MS.gene060945.t1 | MTR_1g036580 | 31.579 | 247 | 139 | 7 | 537 | 754 | 86 | 331 | 1.79e-20 | 94.0 |
MS.gene060945.t1 | MTR_0783s0010 | 29.503 | 322 | 161 | 13 | 491 | 748 | 3 | 322 | 1.75e-18 | 87.8 |
MS.gene060945.t1 | MTR_0602s0010 | 29.268 | 369 | 178 | 15 | 444 | 748 | 2 | 351 | 3.38e-18 | 87.4 |
MS.gene060945.t1 | MTR_5g036460 | 25.545 | 505 | 263 | 19 | 344 | 751 | 874 | 1362 | 6.16e-18 | 89.7 |
MS.gene060945.t1 | MTR_5g036460 | 26.316 | 418 | 222 | 14 | 30 | 373 | 623 | 1028 | 1.44e-15 | 82.0 |
MS.gene060945.t1 | MTR_0069s0090 | 31.188 | 202 | 118 | 4 | 519 | 712 | 6 | 194 | 1.31e-17 | 85.9 |
MS.gene060945.t1 | MTR_0069s0090 | 41.379 | 87 | 44 | 3 | 669 | 754 | 263 | 343 | 1.61e-11 | 67.0 |
MS.gene060945.t1 | MTR_7g088120 | 25.849 | 383 | 202 | 12 | 1 | 370 | 409 | 722 | 1.48e-17 | 87.8 |
MS.gene060945.t1 | MTR_1g050230 | 25.926 | 270 | 155 | 7 | 241 | 491 | 165 | 408 | 3.77e-17 | 85.1 |
MS.gene060945.t1 | MTR_3g055210 | 22.920 | 589 | 337 | 16 | 19 | 549 | 568 | 1097 | 6.69e-17 | 85.9 |
MS.gene060945.t1 | MTR_3g053200 | 24.694 | 409 | 220 | 10 | 20 | 407 | 574 | 915 | 8.20e-16 | 82.4 |
MS.gene060945.t1 | MTR_1g072480 | 45.570 | 79 | 43 | 0 | 392 | 470 | 111 | 189 | 2.74e-14 | 72.8 |
MS.gene060945.t1 | MTR_3g053180 | 42.105 | 95 | 55 | 0 | 20 | 114 | 574 | 668 | 4.45e-12 | 70.5 |
MS.gene060945.t1 | MTR_3g053180 | 42.105 | 95 | 55 | 0 | 20 | 114 | 574 | 668 | 4.87e-12 | 70.1 |
MS.gene060945.t1 | MTR_5g085400 | 25.130 | 386 | 187 | 13 | 1 | 373 | 533 | 829 | 5.53e-12 | 70.1 |
MS.gene060945.t1 | MTR_0043s0110 | 42.056 | 107 | 59 | 1 | 4 | 107 | 547 | 653 | 9.80e-12 | 68.9 |
MS.gene060945.t1 | MTR_8g059295 | 41.379 | 87 | 48 | 2 | 665 | 748 | 168 | 254 | 1.17e-11 | 66.2 |
MS.gene060945.t1 | MTR_0069s0050 | 26.923 | 286 | 136 | 13 | 469 | 748 | 164 | 382 | 1.73e-11 | 67.4 |
MS.gene060945.t1 | MTR_3g466580 | 25.935 | 401 | 219 | 14 | 19 | 407 | 567 | 901 | 3.86e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 131 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTAGTTGCCCTATTTCTTT+TGG | 0.168264 | 2.3:-24588009 | None:intergenic |
AATGAGCTCCCAAAAGAAAT+AGG | 0.204943 | 2.3:+24588000 | MS.gene060945:CDS |
CTAAAGGTCGTTAATTTATA+TGG | 0.222664 | 2.3:+24587829 | MS.gene060945:CDS |
AAACTCAAAGAAGTTAATTC+TGG | 0.236173 | 2.3:-24589980 | None:intergenic |
TACCATTGCTGAAGCAAATA+TGG | 0.261697 | 2.3:+24589756 | MS.gene060945:CDS |
TAGAATGGTTTCTGAGATAA+AGG | 0.313700 | 2.3:-24589344 | None:intergenic |
TCTCGGTAATATAGAGTCTT+TGG | 0.321700 | 2.3:-24590112 | None:intergenic |
TTGAGAAGACTAGTACTTAC+TGG | 0.329515 | 2.3:+24591158 | MS.gene060945:CDS |
CTGTGGGATGACAAACTTCC+GGG | 0.362290 | 2.3:+24589149 | MS.gene060945:CDS |
ACATGTACTTCTATGAGCTT+TGG | 0.363207 | 2.3:-24591627 | None:intergenic |
TTCGAAGTTCTGTCAAATCT+TGG | 0.364231 | 2.3:-24590003 | None:intergenic |
TGATATGTGGAGATGGTCTT+TGG | 0.367918 | 2.3:+24588311 | MS.gene060945:CDS |
CAAAGAGATGGTGGTGGAAA+AGG | 0.375614 | 2.3:-24587865 | None:intergenic |
AGCTGTCTAATATCAATTCT+AGG | 0.375842 | 2.3:+24589123 | MS.gene060945:CDS |
CTTGTAAACCTGCAGTATCT+TGG | 0.377040 | 2.3:+24589260 | MS.gene060945:CDS |
TATCCACCTGGAATATCTTA+AGG | 0.383551 | 2.3:+24591061 | MS.gene060945:CDS |
CTTCCATGTTCAGTTCATAA+AGG | 0.384308 | 2.3:-24588482 | None:intergenic |
CATTAAAATCAGATCTTTCA+AGG | 0.387777 | 2.3:-24587981 | None:intergenic |
GAAAGATACAACATATTTGT+TGG | 0.389965 | 2.3:+24588288 | MS.gene060945:CDS |
AAAGAGATGGTGGTGGAAAA+GGG | 0.391009 | 2.3:-24587864 | None:intergenic |
TGCAAAGACCTGCAAGTCCT+TGG | 0.391930 | 2.3:-24588259 | None:intergenic |
TCAAACGTGAAGCTGTCATT+AGG | 0.403906 | 2.3:-24589788 | None:intergenic |
TTCTCAGAGATTTCCTTGAA+TGG | 0.408124 | 2.3:+24591098 | MS.gene060945:CDS |
TTGTAAACCTGCAGTATCTT+GGG | 0.408562 | 2.3:+24589261 | MS.gene060945:CDS |
ACTGTGGGATGACAAACTTC+CGG | 0.408747 | 2.3:+24589148 | MS.gene060945:CDS |
AGATGGTCTTTGGAATGGTC+TGG | 0.413658 | 2.3:+24588321 | MS.gene060945:CDS |
ATTCTTCTATATAAAGCTCT+TGG | 0.422107 | 2.3:-24589895 | None:intergenic |
CATAGCTGTTTCAAAATGTC+CGG | 0.424193 | 2.3:-24591132 | None:intergenic |
GAGGAGATATTTGTTTCAGA+TGG | 0.428358 | 2.3:+24589305 | MS.gene060945:CDS |
ATCATATCATTGGAGTTGTC+TGG | 0.430188 | 2.3:+24587901 | MS.gene060945:CDS |
ACATCCAGATCTCTCAAAAC+TGG | 0.430575 | 2.3:-24590058 | None:intergenic |
ATGAGCTCCCAAAAGAAATA+GGG | 0.435478 | 2.3:+24588001 | MS.gene060945:CDS |
TATTGTAGCACAGGATGAAA+TGG | 0.441162 | 2.3:+24589931 | MS.gene060945:CDS |
GCAAAGACCTGCAAGTCCTT+GGG | 0.442392 | 2.3:-24588258 | None:intergenic |
CCAGGTGGATAAATCTTTGA+AGG | 0.443214 | 2.3:-24591049 | None:intergenic |
GGTACAAATGCTTCCATTCA+AGG | 0.443775 | 2.3:-24591111 | None:intergenic |
TATTTCAAGCTTAACGTGCT+TGG | 0.447058 | 2.3:+24588092 | MS.gene060945:CDS |
CTTCAAGAATACTTAAGCTC+AGG | 0.455862 | 2.3:+24588358 | MS.gene060945:CDS |
TAGACAGCTTCAAGAGTTCA+AGG | 0.457890 | 2.3:-24589109 | None:intergenic |
TGCTTTCCTTGACATCCCAT+TGG | 0.458316 | 2.3:-24588143 | None:intergenic |
ATACGCATTCTCATCCTTAG+TGG | 0.458606 | 2.3:+24589229 | MS.gene060945:CDS |
TACAAGTTCTCTAGCCACTA+AGG | 0.463813 | 2.3:-24589243 | None:intergenic |
CTCACCTCATCATTATAGAA+TGG | 0.464297 | 2.3:-24589359 | None:intergenic |
AAGAAAATTCGTAGCTAAAA+CGG | 0.472281 | 2.3:+24591698 | MS.gene060945:CDS |
ATGACACCTTAAGATATTCC+AGG | 0.474635 | 2.3:-24591067 | None:intergenic |
AACTCAAAGAAGTTAATTCT+GGG | 0.474698 | 2.3:-24589979 | None:intergenic |
GGGGAATTGCTTTATCCAAT+GGG | 0.474995 | 2.3:+24588128 | MS.gene060945:CDS |
TGGGGAATTGCTTTATCCAA+TGG | 0.476261 | 2.3:+24588127 | MS.gene060945:CDS |
AAATCTCAGTCTTGAGCAGT+TGG | 0.477675 | 2.3:-24588055 | None:intergenic |
AATTCTGGGAAAATAAGTAT+TGG | 0.477871 | 2.3:-24589965 | None:intergenic |
ATGATGGAAACTTTCTCTTA+CGG | 0.491751 | 2.3:+24591591 | MS.gene060945:CDS |
AAGTTTGGTGAAAATTATGA+TGG | 0.494272 | 2.3:+24588944 | MS.gene060945:CDS |
ACATATTTGTTGGTGATATG+TGG | 0.499391 | 2.3:+24588298 | MS.gene060945:CDS |
TGTAATAGATTGTCCCATGA+TGG | 0.504391 | 2.3:+24591575 | MS.gene060945:CDS |
AGTTCAAGAGAACGCAACTT+GGG | 0.506478 | 2.3:-24588857 | None:intergenic |
GAACTTCGAAGCTTCTACTA+CGG | 0.509686 | 2.3:+24590016 | MS.gene060945:CDS |
GCTCATAGAAGTACATGTAA+AGG | 0.513370 | 2.3:+24591632 | MS.gene060945:CDS |
TACTAATCCCAAGATACTGC+AGG | 0.513862 | 2.3:-24589268 | None:intergenic |
AGGAACAAGATGAATGGCAT+TGG | 0.522189 | 2.3:+24591652 | MS.gene060945:CDS |
CTCCGGGATGAGAGAGCTAA+AGG | 0.524166 | 2.3:+24587813 | None:intergenic |
ATGCAAGTCTAGAAGAGCTA+AGG | 0.524717 | 2.3:+24588181 | MS.gene060945:CDS |
AAGCTTGAAATAAGATTCGC+AGG | 0.525220 | 2.3:-24588081 | None:intergenic |
TTCAAATACAACTTCTAGTG+TGG | 0.528370 | 2.3:-24589657 | None:intergenic |
CCTTCAAAGATTTATCCACC+TGG | 0.528424 | 2.3:+24591049 | MS.gene060945:CDS |
CGTAGAGATTATTGTAGCAC+AGG | 0.528659 | 2.3:+24589922 | MS.gene060945:CDS |
TAGTGTTAGACAGACGCGGC+TGG | 0.528716 | 2.3:+24589700 | MS.gene060945:CDS |
AAGTTCAAGAGAACGCAACT+TGG | 0.529656 | 2.3:-24588858 | None:intergenic |
ATTCTTGCATTCAAAACTTG+AGG | 0.531449 | 2.3:+24589174 | MS.gene060945:CDS |
TAGTAACTGTCAAATGTTAG+AGG | 0.532091 | 2.3:+24589286 | MS.gene060945:CDS |
CAGCTTCAAGAGTTCAAGGT+AGG | 0.532138 | 2.3:-24589105 | None:intergenic |
CTTTATGAACTGAACATGGA+AGG | 0.532154 | 2.3:+24588483 | MS.gene060945:CDS |
CTTTATCCAATGGGATGTCA+AGG | 0.533124 | 2.3:+24588137 | MS.gene060945:CDS |
TCTCTCTACATATAAACTCA+AGG | 0.535984 | 2.3:-24591190 | None:intergenic |
TACTTAAGCTCAGGGACAGT+AGG | 0.536423 | 2.3:+24588367 | MS.gene060945:CDS |
ACAAATAAGTTCTGCAGCTG+TGG | 0.539167 | 2.3:-24591555 | None:intergenic |
CTCCATATTTGCTTCAGCAA+TGG | 0.539578 | 2.3:-24589758 | None:intergenic |
AGGAAAGCAAAGATCAAAGC+AGG | 0.540875 | 2.3:+24588157 | MS.gene060945:CDS |
TTGAATGGAAGCATTTGTAC+CGG | 0.544043 | 2.3:+24591113 | MS.gene060945:CDS |
CTACTACGGATTTCATACCT+TGG | 0.545282 | 2.3:+24590030 | MS.gene060945:CDS |
TCTCAAAACTGGACAATCCA+AGG | 0.549115 | 2.3:-24590047 | None:intergenic |
GGAGTTGTCTGGATGTGTGT+TGG | 0.551000 | 2.3:+24587912 | MS.gene060945:CDS |
TTCAAGAATACTTAAGCTCA+GGG | 0.553953 | 2.3:+24588359 | MS.gene060945:CDS |
TAAGAGAAAGTTTCCATCAT+GGG | 0.555923 | 2.3:-24591588 | None:intergenic |
TGTGGCCTTAGTTGATGAAA+AGG | 0.556660 | 2.3:+24588982 | MS.gene060945:CDS |
AGCTCTTTAGCCACAGAGAA+GGG | 0.558215 | 2.3:-24589863 | None:intergenic |
AAGAGATGGTGGTGGAAAAG+GGG | 0.561724 | 2.3:-24587863 | None:intergenic |
AAGCTCTTTAGCCACAGAGA+AGG | 0.561866 | 2.3:-24589864 | None:intergenic |
GGAGCTTATTCTGAATTGCA+AGG | 0.563928 | 2.3:+24590917 | MS.gene060945:CDS |
ATTCAAGGAAATCTCTGAGA+AGG | 0.564049 | 2.3:-24591096 | None:intergenic |
ATGTAAAGGAACAAGATGAA+TGG | 0.567465 | 2.3:+24591646 | MS.gene060945:CDS |
TATCAACTGGGACACTGTCT+CGG | 0.567994 | 2.3:-24590129 | None:intergenic |
AAGTTGACCGTTGCATAACA+TGG | 0.571167 | 2.3:-24590946 | None:intergenic |
GTAAGAGAAAGTTTCCATCA+TGG | 0.573483 | 2.3:-24591589 | None:intergenic |
TATCAATTCTAGGAAACTGT+GGG | 0.578265 | 2.3:+24589133 | MS.gene060945:CDS |
AATCTTTGAAGGAAACCAGA+TGG | 0.580028 | 2.3:-24591038 | None:intergenic |
CTTATCAGCTGTCAATGACA+TGG | 0.580631 | 2.3:-24588912 | None:intergenic |
TTTCCTTTATGAACTGAACA+TGG | 0.580781 | 2.3:+24588479 | MS.gene060945:CDS |
TGCTGAAGCAAATATGGAGT+GGG | 0.580832 | 2.3:+24589762 | MS.gene060945:CDS |
TCAAATACAACTTCTAGTGT+GGG | 0.581463 | 2.3:-24589656 | None:intergenic |
AGCTTCAAGAGTTCAAGGTA+GGG | 0.583937 | 2.3:-24589104 | None:intergenic |
TGCTTGGAAGAGTTGTACAT+GGG | 0.594438 | 2.3:+24588108 | MS.gene060945:CDS |
CATAGTTGAGCAAGAATCTG+AGG | 0.594697 | 2.3:+24588805 | MS.gene060945:CDS |
CAGAATAAGCTCCCTTGCGG+TGG | 0.596460 | 2.3:-24590907 | None:intergenic |
GTGCTTGGAAGAGTTGTACA+TGG | 0.599894 | 2.3:+24588107 | MS.gene060945:CDS |
ATATCAATTCTAGGAAACTG+TGG | 0.600203 | 2.3:+24589132 | MS.gene060945:CDS |
TTGTTGGTGATATGTGGAGA+TGG | 0.601290 | 2.3:+24588304 | MS.gene060945:CDS |
TGTGGAGATGGTCTTTGGAA+TGG | 0.603597 | 2.3:+24588316 | MS.gene060945:CDS |
CAGTAACTTTCAATATGCAG+AGG | 0.603982 | 2.3:-24589814 | None:intergenic |
TTTCTTGTTGAATTCAGCTG+AGG | 0.609149 | 2.3:+24588422 | MS.gene060945:CDS |
GTCAAGAGACAAAGAGATGG+TGG | 0.609507 | 2.3:-24587874 | None:intergenic |
ACTAAGGATGAGAATGCGTA+TGG | 0.617029 | 2.3:-24589227 | None:intergenic |
AATGGTTTCTGAGATAAAGG+AGG | 0.617617 | 2.3:-24589341 | None:intergenic |
TTGCTGAAGCAAATATGGAG+TGG | 0.618978 | 2.3:+24589761 | MS.gene060945:CDS |
TTTGTCAAGAGACAAAGAGA+TGG | 0.622519 | 2.3:-24587877 | None:intergenic |
AAGAGACAAAGAGATGGTGG+TGG | 0.629527 | 2.3:-24587871 | None:intergenic |
CAAGATGAATGGCATTGGAA+TGG | 0.630124 | 2.3:+24591657 | MS.gene060945:CDS |
GAAGTTGTATTTGAAACACA+AGG | 0.636930 | 2.3:+24589665 | MS.gene060945:CDS |
GTTCAAGAGAACGCAACTTG+GGG | 0.642637 | 2.3:-24588856 | None:intergenic |
GAACAGAAACTAATGAGACT+AGG | 0.643138 | 2.3:-24588890 | None:intergenic |
GAAACCATTCTATAATGATG+AGG | 0.643536 | 2.3:+24589355 | MS.gene060945:CDS |
GAGCTTTATATAGAAGAATG+TGG | 0.643823 | 2.3:+24589899 | MS.gene060945:CDS |
TCGCGTCATGAAAACATCGT+AGG | 0.647254 | 2.3:-24591004 | None:intergenic |
TGGTCTTTGGAATGGTCTGG+AGG | 0.647768 | 2.3:+24588324 | MS.gene060945:CDS |
GATGTCACCATGTTATGCAA+CGG | 0.655108 | 2.3:+24590939 | MS.gene060945:CDS |
CAAATAGTGTTAGACAGACG+CGG | 0.656290 | 2.3:+24589696 | MS.gene060945:CDS |
GCTTGGAAGAGTTGTACATG+GGG | 0.686916 | 2.3:+24588109 | MS.gene060945:CDS |
ATTCAGAATAAGCTCCCTTG+CGG | 0.701268 | 2.3:-24590910 | None:intergenic |
ACACCTTAAGATATTCCAGG+TGG | 0.715915 | 2.3:-24591064 | None:intergenic |
AGTTTGACAATCGACAAATG+TGG | 0.727515 | 2.3:+24589197 | MS.gene060945:CDS |
TGGTACACAGTGCATACCTG+TGG | 0.766778 | 2.3:+24588964 | MS.gene060945:CDS |
TATATGTAGAGAGAAATCTG+AGG | 0.780386 | 2.3:+24591199 | MS.gene060945:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTATCAAGATTTTATTT+TGG | - | chr2.3:24589065-24589084 | None:intergenic | 10.0% |
!!! | TATTATCAAGATTTTATTTT+GGG | - | chr2.3:24589064-24589083 | None:intergenic | 10.0% |
!! | TACAAAAACTTAGAAAATTA+TGG | + | chr2.3:24591384-24591403 | MS.gene060945:intron | 15.0% |
!! | TCTTCAAAATATTGAAATAT+TGG | + | chr2.3:24591232-24591251 | MS.gene060945:intron | 15.0% |
!! | TTTATATCATAAGAATTCAT+AGG | - | chr2.3:24590642-24590661 | None:intergenic | 15.0% |
!!! | ATAATATTTTGTTATAGGTT+GGG | + | chr2.3:24589078-24589097 | MS.gene060945:intron | 15.0% |
!!! | ATTTTCTTATAGTACTATTA+AGG | - | chr2.3:24591686-24591705 | None:intergenic | 15.0% |
!!! | TCTTGATAATATTTTGTTAT+AGG | + | chr2.3:24589073-24589092 | MS.gene060945:intron | 15.0% |
!! | AAGACTCTATTTAAAAAATC+TGG | - | chr2.3:24590443-24590462 | None:intergenic | 20.0% |
!!! | AGATTTTTTAAATAGAGTCT+TGG | + | chr2.3:24590442-24590461 | MS.gene060945:intron | 20.0% |
!!! | ATAAAGAAGTATTCAATATG+TGG | - | chr2.3:24590207-24590226 | None:intergenic | 20.0% |
!!! | ATTTCAATATTTTGAAGAAC+CGG | - | chr2.3:24591230-24591249 | None:intergenic | 20.0% |
!!! | GATAATATTTTGTTATAGGT+TGG | + | chr2.3:24589077-24589096 | MS.gene060945:intron | 20.0% |
!!! | TAAAAATGACATTTTTTGTG+CGG | - | chr2.3:24590248-24590267 | None:intergenic | 20.0% |
!!! | TAAAGAAGTATTCAATATGT+GGG | - | chr2.3:24590206-24590225 | None:intergenic | 20.0% |
! | AAACAAAATCTAAGTGTTAG+TGG | + | chr2.3:24590305-24590324 | MS.gene060945:intron | 25.0% |
! | AAACTCAAAGAAGTTAATTC+TGG | - | chr2.3:24589983-24590002 | None:intergenic | 25.0% |
! | AACTCAAAGAAGTTAATTCT+GGG | - | chr2.3:24589982-24590001 | None:intergenic | 25.0% |
! | AAGAAAATTCGTAGCTAAAA+CGG | + | chr2.3:24591698-24591717 | MS.gene060945:CDS | 25.0% |
! | AAGTTAATTGCACTAGTTAA+TGG | - | chr2.3:24589405-24589424 | None:intergenic | 25.0% |
! | AATGTATTAAGCACATAAGA+TGG | - | chr2.3:24589602-24589621 | None:intergenic | 25.0% |
! | ACAAAACAACAATATGAGAA+TGG | - | chr2.3:24591770-24591789 | None:intergenic | 25.0% |
! | ATAGCCATTGAAATATCATT+TGG | - | chr2.3:24590506-24590525 | None:intergenic | 25.0% |
! | ATTCTTCTATATAAAGCTCT+TGG | - | chr2.3:24589898-24589917 | None:intergenic | 25.0% |
! | CAATCATAATTCGAATGTTA+CGG | + | chr2.3:24591741-24591760 | MS.gene060945:intron | 25.0% |
! | CATTAAAATCAGATCTTTCA+AGG | - | chr2.3:24587984-24588003 | None:intergenic | 25.0% |
! | CATTGAAATATCATTTGGTA+GGG | - | chr2.3:24590501-24590520 | None:intergenic | 25.0% |
! | CTAAAGGTCGTTAATTTATA+TGG | + | chr2.3:24587829-24587848 | MS.gene060945:CDS | 25.0% |
! | CTTGACAAAAATCATATCAT+TGG | + | chr2.3:24587891-24587910 | MS.gene060945:CDS | 25.0% |
! | GAAAGATACAACATATTTGT+TGG | + | chr2.3:24588288-24588307 | MS.gene060945:CDS | 25.0% |
! | TAGTTTGGTAAAGATTGAAT+TGG | - | chr2.3:24588666-24588685 | None:intergenic | 25.0% |
! | TATTCAATGAGGAGTTTAAA+AGG | + | chr2.3:24590331-24590350 | MS.gene060945:intron | 25.0% |
! | TATTGTAACATTGAATGTCT+AGG | + | chr2.3:24590579-24590598 | MS.gene060945:intron | 25.0% |
!! | AAGTTTGGTGAAAATTATGA+TGG | + | chr2.3:24588944-24588963 | MS.gene060945:CDS | 25.0% |
!! | AATTCTGGGAAAATAAGTAT+TGG | - | chr2.3:24589968-24589987 | None:intergenic | 25.0% |
!! | CAAGCATTTTTCTTTATCAT+GGG | + | chr2.3:24588394-24588413 | MS.gene060945:CDS | 25.0% |
!! | TCAAGCATTTTTCTTTATCA+TGG | + | chr2.3:24588393-24588412 | MS.gene060945:CDS | 25.0% |
!! | TTCAGTTTGCATAATGATTT+TGG | - | chr2.3:24589536-24589555 | None:intergenic | 25.0% |
!!! | ACAAGTTGAAGAATTTGTTA+TGG | + | chr2.3:24588711-24588730 | MS.gene060945:intron | 25.0% |
!!! | ATTTTTATTTCGTGAAGTTG+AGG | - | chr2.3:24588758-24588777 | None:intergenic | 25.0% |
!!! | CTAAAATCTTTTGAAGTCAA+AGG | + | chr2.3:24588683-24588702 | MS.gene060945:intron | 25.0% |
!!! | CTTTGCTATTTGTCTTTTTA+AGG | + | chr2.3:24589029-24589048 | MS.gene060945:intron | 25.0% |
!!! | GACTTCAAAAGATTTTAGTT+TGG | - | chr2.3:24588681-24588700 | None:intergenic | 25.0% |
AATCTAGAAGAAATATGTCG+TGG | + | chr2.3:24588633-24588652 | MS.gene060945:intron | 30.0% | |
AGAAGGGAAAAACATGATTA+AGG | - | chr2.3:24589850-24589869 | None:intergenic | 30.0% | |
AGCTGTCTAATATCAATTCT+AGG | + | chr2.3:24589123-24589142 | MS.gene060945:CDS | 30.0% | |
ATGTAAAGGAACAAGATGAA+TGG | + | chr2.3:24591646-24591665 | MS.gene060945:CDS | 30.0% | |
ATTCTTGCATTCAAAACTTG+AGG | + | chr2.3:24589174-24589193 | MS.gene060945:CDS | 30.0% | |
CCATTGAAATATCATTTGGT+AGG | - | chr2.3:24590502-24590521 | None:intergenic | 30.0% | |
CCTACCAAATGATATTTCAA+TGG | + | chr2.3:24590499-24590518 | MS.gene060945:intron | 30.0% | |
CGTAACATTCGAATTATGAT+TGG | - | chr2.3:24591743-24591762 | None:intergenic | 30.0% | |
CTAGTTAATGGTTAAAGAGT+TGG | - | chr2.3:24589393-24589412 | None:intergenic | 30.0% | |
GAAACCATTCTATAATGATG+AGG | + | chr2.3:24589355-24589374 | MS.gene060945:CDS | 30.0% | |
GATAAGTGTCTCAAAAAGTT+TGG | + | chr2.3:24588929-24588948 | MS.gene060945:CDS | 30.0% | |
GCTTAATACATTACAGAATC+TGG | + | chr2.3:24589610-24589629 | MS.gene060945:intron | 30.0% | |
GTAAAGATTGAATTGGAACT+GGG | - | chr2.3:24588659-24588678 | None:intergenic | 30.0% | |
GTAGGTTATATTTCCAAACT+TGG | + | chr2.3:24589451-24589470 | MS.gene060945:intron | 30.0% | |
TAAGAGAAAGTTTCCATCAT+GGG | - | chr2.3:24591591-24591610 | None:intergenic | 30.0% | |
TAGTAACTGTCAAATGTTAG+AGG | + | chr2.3:24589286-24589305 | MS.gene060945:CDS | 30.0% | |
TATATGTAGAGAGAAATCTG+AGG | + | chr2.3:24591199-24591218 | MS.gene060945:CDS | 30.0% | |
TCAAATACAACTTCTAGTGT+GGG | - | chr2.3:24589659-24589678 | None:intergenic | 30.0% | |
TCTCTCTACATATAAACTCA+AGG | - | chr2.3:24591193-24591212 | None:intergenic | 30.0% | |
TGTCTAGGAAACAATCTAAT+AGG | + | chr2.3:24590594-24590613 | MS.gene060945:intron | 30.0% | |
TTCAAATACAACTTCTAGTG+TGG | - | chr2.3:24589660-24589679 | None:intergenic | 30.0% | |
TTCAAGAATACTTAAGCTCA+GGG | + | chr2.3:24588359-24588378 | MS.gene060945:CDS | 30.0% | |
TTGAGGAAGGTTTATAACAA+GGG | - | chr2.3:24588741-24588760 | None:intergenic | 30.0% | |
TTGCAAAAACTTCTTAGCAT+TGG | - | chr2.3:24591513-24591532 | None:intergenic | 30.0% | |
TTTCCTTTATGAACTGAACA+TGG | + | chr2.3:24588479-24588498 | MS.gene060945:CDS | 30.0% | |
! | AAGTCTTGTAGAGTTCAATT+GGG | + | chr2.3:24590412-24590431 | MS.gene060945:intron | 30.0% |
! | AATGCTAAGAAGTTTTTGCA+AGG | + | chr2.3:24591512-24591531 | MS.gene060945:CDS | 30.0% |
! | ATATCAATTCTAGGAAACTG+TGG | + | chr2.3:24589132-24589151 | MS.gene060945:CDS | 30.0% |
! | ATGATGGAAACTTTCTCTTA+CGG | + | chr2.3:24591591-24591610 | MS.gene060945:CDS | 30.0% |
! | ATGCTAAGAAGTTTTTGCAA+GGG | + | chr2.3:24591513-24591532 | MS.gene060945:CDS | 30.0% |
! | GAAGTTGTATTTGAAACACA+AGG | + | chr2.3:24589665-24589684 | MS.gene060945:CDS | 30.0% |
! | GAGCTTTATATAGAAGAATG+TGG | + | chr2.3:24589899-24589918 | MS.gene060945:CDS | 30.0% |
! | TAAGTCTTGTAGAGTTCAAT+TGG | + | chr2.3:24590411-24590430 | MS.gene060945:intron | 30.0% |
! | TATCAATTCTAGGAAACTGT+GGG | + | chr2.3:24589133-24589152 | MS.gene060945:CDS | 30.0% |
! | TATTGAAAGAGTTGATCAAG+TGG | + | chr2.3:24590523-24590542 | MS.gene060945:intron | 30.0% |
! | TTTCACCTTTTCATCAACTA+AGG | - | chr2.3:24588990-24589009 | None:intergenic | 30.0% |
! | TTTCTTGTTTGTGAATATCC+AGG | + | chr2.3:24591790-24591809 | MS.gene060945:intron | 30.0% |
!! | ACATATTTGTTGGTGATATG+TGG | + | chr2.3:24588298-24588317 | MS.gene060945:CDS | 30.0% |
!! | TAGAATGGTTTCTGAGATAA+AGG | - | chr2.3:24589347-24589366 | None:intergenic | 30.0% |
!! | TTAGTTGCCCTATTTCTTTT+GGG | - | chr2.3:24588011-24588030 | None:intergenic | 30.0% |
!! | TTTAGTTGCCCTATTTCTTT+TGG | - | chr2.3:24588012-24588031 | None:intergenic | 30.0% |
!!! | TCAAGTTTTGAATGCAAGAA+TGG | - | chr2.3:24589175-24589194 | None:intergenic | 30.0% |
AAGCTTGAAATAAGATTCGC+AGG | - | chr2.3:24588084-24588103 | None:intergenic | 35.0% | |
AATGAGCTCCCAAAAGAAAT+AGG | + | chr2.3:24588000-24588019 | MS.gene060945:CDS | 35.0% | |
ACATGTACTTCTATGAGCTT+TGG | - | chr2.3:24591630-24591649 | None:intergenic | 35.0% | |
AGTTTGACAATCGACAAATG+TGG | + | chr2.3:24589197-24589216 | MS.gene060945:CDS | 35.0% | |
ATCATATCATTGGAGTTGTC+TGG | + | chr2.3:24587901-24587920 | MS.gene060945:CDS | 35.0% | |
ATGACACCTTAAGATATTCC+AGG | - | chr2.3:24591070-24591089 | None:intergenic | 35.0% | |
ATGAGCTCCCAAAAGAAATA+GGG | + | chr2.3:24588001-24588020 | MS.gene060945:CDS | 35.0% | |
ATTACCAATGTCTCCAAGTT+TGG | - | chr2.3:24589467-24589486 | None:intergenic | 35.0% | |
ATTTCCAAACTTGGAGACAT+TGG | + | chr2.3:24589460-24589479 | MS.gene060945:intron | 35.0% | |
CAGTAACTTTCAATATGCAG+AGG | - | chr2.3:24589817-24589836 | None:intergenic | 35.0% | |
CTACAATCAGTGATAGACTT+AGG | - | chr2.3:24589435-24589454 | None:intergenic | 35.0% | |
CTCACCTCATCATTATAGAA+TGG | - | chr2.3:24589362-24589381 | None:intergenic | 35.0% | |
CTTCAAGAATACTTAAGCTC+AGG | + | chr2.3:24588358-24588377 | MS.gene060945:CDS | 35.0% | |
CTTCCATGTTCAGTTCATAA+AGG | - | chr2.3:24588485-24588504 | None:intergenic | 35.0% | |
CTTTATGAACTGAACATGGA+AGG | + | chr2.3:24588483-24588502 | MS.gene060945:CDS | 35.0% | |
GAACAGAAACTAATGAGACT+AGG | - | chr2.3:24588893-24588912 | None:intergenic | 35.0% | |
GAGGAGATATTTGTTTCAGA+TGG | + | chr2.3:24589305-24589324 | MS.gene060945:CDS | 35.0% | |
GGTAAAGATTGAATTGGAAC+TGG | - | chr2.3:24588660-24588679 | None:intergenic | 35.0% | |
GTAAGAGAAAGTTTCCATCA+TGG | - | chr2.3:24591592-24591611 | None:intergenic | 35.0% | |
GTTGAGGAAGGTTTATAACA+AGG | - | chr2.3:24588742-24588761 | None:intergenic | 35.0% | |
TACCATTGCTGAAGCAAATA+TGG | + | chr2.3:24589756-24589775 | MS.gene060945:CDS | 35.0% | |
TATAAGCATGGAACCAAACT+TGG | - | chr2.3:24590781-24590800 | None:intergenic | 35.0% | |
TATCCACCTGGAATATCTTA+AGG | + | chr2.3:24591061-24591080 | MS.gene060945:CDS | 35.0% | |
TATTGTAGCACAGGATGAAA+TGG | + | chr2.3:24589931-24589950 | MS.gene060945:CDS | 35.0% | |
TATTTCAAGCTTAACGTGCT+TGG | + | chr2.3:24588092-24588111 | MS.gene060945:CDS | 35.0% | |
TCTCGGTAATATAGAGTCTT+TGG | - | chr2.3:24590115-24590134 | None:intergenic | 35.0% | |
TGACTTCAAATGTTCCATGT+GGG | - | chr2.3:24589492-24589511 | None:intergenic | 35.0% | |
TGATCAAGTGGACAAGTAAT+AGG | + | chr2.3:24590535-24590554 | MS.gene060945:intron | 35.0% | |
TGTAATAGATTGTCCCATGA+TGG | + | chr2.3:24591575-24591594 | MS.gene060945:CDS | 35.0% | |
TTATTTCGTGAAGTTGAGGA+AGG | - | chr2.3:24588754-24588773 | None:intergenic | 35.0% | |
TTCGAAGTTCTGTCAAATCT+TGG | - | chr2.3:24590006-24590025 | None:intergenic | 35.0% | |
TTCTCAGAGATTTCCTTGAA+TGG | + | chr2.3:24591098-24591117 | MS.gene060945:CDS | 35.0% | |
TTCTCGAACAACATTGAAGA+TGG | - | chr2.3:24591293-24591312 | None:intergenic | 35.0% | |
TTGAGAAGACTAGTACTTAC+TGG | + | chr2.3:24591158-24591177 | MS.gene060945:CDS | 35.0% | |
TTGTAAACCTGCAGTATCTT+GGG | + | chr2.3:24589261-24589280 | MS.gene060945:CDS | 35.0% | |
TTTCTTGTTGAATTCAGCTG+AGG | + | chr2.3:24588422-24588441 | MS.gene060945:CDS | 35.0% | |
TTTGTCAAGAGACAAAGAGA+TGG | - | chr2.3:24587880-24587899 | None:intergenic | 35.0% | |
! | AATCTTTGAAGGAAACCAGA+TGG | - | chr2.3:24591041-24591060 | None:intergenic | 35.0% |
! | ACCTTTTCAATTGAGAGAAG+GGG | - | chr2.3:24590160-24590179 | None:intergenic | 35.0% |
! | ATTCAAGGAAATCTCTGAGA+AGG | - | chr2.3:24591099-24591118 | None:intergenic | 35.0% |
! | CACCTTTTCAATTGAGAGAA+GGG | - | chr2.3:24590161-24590180 | None:intergenic | 35.0% |
! | CATAGCTGTTTCAAAATGTC+CGG | - | chr2.3:24591135-24591154 | None:intergenic | 35.0% |
! | CTAAGTCTATCACTGATTGT+AGG | + | chr2.3:24589433-24589452 | MS.gene060945:intron | 35.0% |
! | CTTTTGTGCACATATAAGCA+TGG | - | chr2.3:24590793-24590812 | None:intergenic | 35.0% |
! | GCTCATAGAAGTACATGTAA+AGG | + | chr2.3:24591632-24591651 | MS.gene060945:CDS | 35.0% |
! | GTTAGTGGATCTATTCAATG+AGG | + | chr2.3:24590320-24590339 | MS.gene060945:intron | 35.0% |
! | TGGAACATTTGAAGTCAGTA+TGG | + | chr2.3:24589495-24589514 | MS.gene060945:intron | 35.0% |
!! | AATGGTTTCTGAGATAAAGG+AGG | - | chr2.3:24589344-24589363 | None:intergenic | 35.0% |
!! | TTGAATGGAAGCATTTGTAC+CGG | + | chr2.3:24591113-24591132 | MS.gene060945:CDS | 35.0% |
AAATCTCAGTCTTGAGCAGT+TGG | - | chr2.3:24588058-24588077 | None:intergenic | 40.0% | |
AAGAGCCAAAGTCTCTAAGT+TGG | - | chr2.3:24588601-24588620 | None:intergenic | 40.0% | |
AAGTTCAAGAGAACGCAACT+TGG | - | chr2.3:24588861-24588880 | None:intergenic | 40.0% | |
AAGTTGACCGTTGCATAACA+TGG | - | chr2.3:24590949-24590968 | None:intergenic | 40.0% | |
ACAAATAAGTTCTGCAGCTG+TGG | - | chr2.3:24591558-24591577 | None:intergenic | 40.0% | |
ACACCTTAAGATATTCCAGG+TGG | - | chr2.3:24591067-24591086 | None:intergenic | 40.0% | |
ACATCCAGATCTCTCAAAAC+TGG | - | chr2.3:24590061-24590080 | None:intergenic | 40.0% | |
ACTAAGGATGAGAATGCGTA+TGG | - | chr2.3:24589230-24589249 | None:intergenic | 40.0% | |
AGAGCCAAAGTCTCTAAGTT+GGG | - | chr2.3:24588600-24588619 | None:intergenic | 40.0% | |
AGCTTCAAGAGTTCAAGGTA+GGG | - | chr2.3:24589107-24589126 | None:intergenic | 40.0% | |
AGGAAAGCAAAGATCAAAGC+AGG | + | chr2.3:24588157-24588176 | MS.gene060945:CDS | 40.0% | |
AGGAACAAGATGAATGGCAT+TGG | + | chr2.3:24591652-24591671 | MS.gene060945:CDS | 40.0% | |
AGTTCAAGAGAACGCAACTT+GGG | - | chr2.3:24588860-24588879 | None:intergenic | 40.0% | |
ATACGCATTCTCATCCTTAG+TGG | + | chr2.3:24589229-24589248 | MS.gene060945:CDS | 40.0% | |
ATGCAAGTCTAGAAGAGCTA+AGG | + | chr2.3:24588181-24588200 | MS.gene060945:CDS | 40.0% | |
ATGTGCAAGTGCTTTAGTTG+AGG | - | chr2.3:24588513-24588532 | None:intergenic | 40.0% | |
ATTCAGAATAAGCTCCCTTG+CGG | - | chr2.3:24590913-24590932 | None:intergenic | 40.0% | |
CAAATAGTGTTAGACAGACG+CGG | + | chr2.3:24589696-24589715 | MS.gene060945:CDS | 40.0% | |
CATAGTTGAGCAAGAATCTG+AGG | + | chr2.3:24588805-24588824 | MS.gene060945:CDS | 40.0% | |
CCAGGTGGATAAATCTTTGA+AGG | - | chr2.3:24591052-24591071 | None:intergenic | 40.0% | |
CCTTCAAAGATTTATCCACC+TGG | + | chr2.3:24591049-24591068 | MS.gene060945:CDS | 40.0% | |
CGTAGAGATTATTGTAGCAC+AGG | + | chr2.3:24589922-24589941 | MS.gene060945:CDS | 40.0% | |
CTACTACGGATTTCATACCT+TGG | + | chr2.3:24590030-24590049 | MS.gene060945:CDS | 40.0% | |
CTCCATATTTGCTTCAGCAA+TGG | - | chr2.3:24589761-24589780 | None:intergenic | 40.0% | |
CTGACTTCAAATGTTCCATG+TGG | - | chr2.3:24589493-24589512 | None:intergenic | 40.0% | |
CTTATCAGCTGTCAATGACA+TGG | - | chr2.3:24588915-24588934 | None:intergenic | 40.0% | |
CTTGTAAACCTGCAGTATCT+TGG | + | chr2.3:24589260-24589279 | MS.gene060945:CDS | 40.0% | |
CTTTATCCAATGGGATGTCA+AGG | + | chr2.3:24588137-24588156 | MS.gene060945:CDS | 40.0% | |
GAACTTCGAAGCTTCTACTA+CGG | + | chr2.3:24590016-24590035 | MS.gene060945:CDS | 40.0% | |
GATGTCACCATGTTATGCAA+CGG | + | chr2.3:24590939-24590958 | MS.gene060945:CDS | 40.0% | |
GCGACTGAAAAATTTCCATC+TGG | + | chr2.3:24591023-24591042 | MS.gene060945:CDS | 40.0% | |
GGAGCTTATTCTGAATTGCA+AGG | + | chr2.3:24590917-24590936 | MS.gene060945:CDS | 40.0% | |
GGGGAATTGCTTTATCCAAT+GGG | + | chr2.3:24588128-24588147 | MS.gene060945:CDS | 40.0% | |
GGTACAAATGCTTCCATTCA+AGG | - | chr2.3:24591114-24591133 | None:intergenic | 40.0% | |
GTCTTGTATCAGTCCAAGTT+TGG | + | chr2.3:24590765-24590784 | MS.gene060945:intron | 40.0% | |
TACAAGTTCTCTAGCCACTA+AGG | - | chr2.3:24589246-24589265 | None:intergenic | 40.0% | |
TACTAATCCCAAGATACTGC+AGG | - | chr2.3:24589271-24589290 | None:intergenic | 40.0% | |
TAGACAGCTTCAAGAGTTCA+AGG | - | chr2.3:24589112-24589131 | None:intergenic | 40.0% | |
TCAAACGTGAAGCTGTCATT+AGG | - | chr2.3:24589791-24589810 | None:intergenic | 40.0% | |
TCTCAAAACTGGACAATCCA+AGG | - | chr2.3:24590050-24590069 | None:intergenic | 40.0% | |
TGATATGTGGAGATGGTCTT+TGG | + | chr2.3:24588311-24588330 | MS.gene060945:CDS | 40.0% | |
TGCTGAAGCAAATATGGAGT+GGG | + | chr2.3:24589762-24589781 | MS.gene060945:CDS | 40.0% | |
TGCTTGGAAGAGTTGTACAT+GGG | + | chr2.3:24588108-24588127 | MS.gene060945:CDS | 40.0% | |
TGGGGAATTGCTTTATCCAA+TGG | + | chr2.3:24588127-24588146 | MS.gene060945:CDS | 40.0% | |
TTGCTGAAGCAAATATGGAG+TGG | + | chr2.3:24589761-24589780 | MS.gene060945:CDS | 40.0% | |
TTTCCCCAACTTAGAGACTT+TGG | + | chr2.3:24588593-24588612 | MS.gene060945:intron | 40.0% | |
! | AATTTAGAGCAGTTGGAGGT+GGG | + | chr2.3:24591311-24591330 | MS.gene060945:intron | 40.0% |
! | AGTTTTTGCAAGGGAAGACA+TGG | + | chr2.3:24591522-24591541 | MS.gene060945:CDS | 40.0% |
! | ATAGATTTTCACCACCGCAA+GGG | + | chr2.3:24590896-24590915 | MS.gene060945:intron | 40.0% |
! | CAAGATGAATGGCATTGGAA+TGG | + | chr2.3:24591657-24591676 | MS.gene060945:CDS | 40.0% |
! | CCTTTTCAATTGAGAGAAGG+GGG | - | chr2.3:24590159-24590178 | None:intergenic | 40.0% |
! | GACATTGGTAATATCCCACA+TGG | + | chr2.3:24589475-24589494 | MS.gene060945:intron | 40.0% |
! | GCACCTTTTCAATTGAGAGA+AGG | - | chr2.3:24590162-24590181 | None:intergenic | 40.0% |
! | GTTCGAGAATTTAGAGCAGT+TGG | + | chr2.3:24591304-24591323 | MS.gene060945:intron | 40.0% |
! | TCATGTTTTTCCCTTCTCTG+TGG | + | chr2.3:24589853-24589872 | MS.gene060945:CDS | 40.0% |
! | TTTTCATCAACTAAGGCCAC+AGG | - | chr2.3:24588983-24589002 | None:intergenic | 40.0% |
! | TTTTGAATGCAAGAATGGCC+CGG | - | chr2.3:24589170-24589189 | None:intergenic | 40.0% |
!! | AAAGAGATGGTGGTGGAAAA+GGG | - | chr2.3:24587867-24587886 | None:intergenic | 40.0% |
!! | TGTGGCCTTAGTTGATGAAA+AGG | + | chr2.3:24588982-24589001 | MS.gene060945:CDS | 40.0% |
!! | TTGTTGGTGATATGTGGAGA+TGG | + | chr2.3:24588304-24588323 | MS.gene060945:CDS | 40.0% |
!!! | TTGTCCAGTTTTGAGAGATC+TGG | + | chr2.3:24590054-24590073 | MS.gene060945:CDS | 40.0% |
AAGCTCTTTAGCCACAGAGA+AGG | - | chr2.3:24589867-24589886 | None:intergenic | 45.0% | |
ACTGTGGGATGACAAACTTC+CGG | + | chr2.3:24589148-24589167 | MS.gene060945:CDS | 45.0% | |
AGCTCTTTAGCCACAGAGAA+GGG | - | chr2.3:24589866-24589885 | None:intergenic | 45.0% | |
CAGCTTCAAGAGTTCAAGGT+AGG | - | chr2.3:24589108-24589127 | None:intergenic | 45.0% | |
CCCCCTTCTCTCAATTGAAA+AGG | + | chr2.3:24590156-24590175 | MS.gene060945:CDS | 45.0% | |
GAGCCAAAGTCTCTAAGTTG+GGG | - | chr2.3:24588599-24588618 | None:intergenic | 45.0% | |
GCTTGGAAGAGTTGTACATG+GGG | + | chr2.3:24588109-24588128 | MS.gene060945:CDS | 45.0% | |
GTCAAGAGACAAAGAGATGG+TGG | - | chr2.3:24587877-24587896 | None:intergenic | 45.0% | |
GTGCTTGGAAGAGTTGTACA+TGG | + | chr2.3:24588107-24588126 | MS.gene060945:CDS | 45.0% | |
GTTCAAGAGAACGCAACTTG+GGG | - | chr2.3:24588859-24588878 | None:intergenic | 45.0% | |
TACTTAAGCTCAGGGACAGT+AGG | + | chr2.3:24588367-24588386 | MS.gene060945:CDS | 45.0% | |
TATCAACTGGGACACTGTCT+CGG | - | chr2.3:24590132-24590151 | None:intergenic | 45.0% | |
TCGCGTCATGAAAACATCGT+AGG | - | chr2.3:24591007-24591026 | None:intergenic | 45.0% | |
TGCTTTCCTTGACATCCCAT+TGG | - | chr2.3:24588146-24588165 | None:intergenic | 45.0% | |
! | AAGAGACAAAGAGATGGTGG+TGG | - | chr2.3:24587874-24587893 | None:intergenic | 45.0% |
! | AGAGAAATCTGAGGTGCAAC+CGG | + | chr2.3:24591208-24591227 | MS.gene060945:intron | 45.0% |
! | AGATGCTTCAGTTTTGCCCA+AGG | + | chr2.3:24588242-24588261 | MS.gene060945:CDS | 45.0% |
! | CATAGATTTTCACCACCGCA+AGG | + | chr2.3:24590895-24590914 | MS.gene060945:intron | 45.0% |
! | CGAGAATTTAGAGCAGTTGG+AGG | + | chr2.3:24591307-24591326 | MS.gene060945:intron | 45.0% |
! | GAATTTAGAGCAGTTGGAGG+TGG | + | chr2.3:24591310-24591329 | MS.gene060945:intron | 45.0% |
! | TGTGGAGATGGTCTTTGGAA+TGG | + | chr2.3:24588316-24588335 | MS.gene060945:CDS | 45.0% |
!! | AAGAGATGGTGGTGGAAAAG+GGG | - | chr2.3:24587866-24587885 | None:intergenic | 45.0% |
!! | AGATGGTCTTTGGAATGGTC+TGG | + | chr2.3:24588321-24588340 | MS.gene060945:CDS | 45.0% |
!! | CAAAGAGATGGTGGTGGAAA+AGG | - | chr2.3:24587868-24587887 | None:intergenic | 45.0% |
CTGTGGGATGACAAACTTCC+GGG | + | chr2.3:24589149-24589168 | MS.gene060945:CDS | 50.0% | |
GCAAAGACCTGCAAGTCCTT+GGG | - | chr2.3:24588261-24588280 | None:intergenic | 50.0% | |
GGAGTTGTCTGGATGTGTGT+TGG | + | chr2.3:24587912-24587931 | MS.gene060945:CDS | 50.0% | |
TGCAAAGACCTGCAAGTCCT+TGG | - | chr2.3:24588262-24588281 | None:intergenic | 50.0% | |
TGGTACACAGTGCATACCTG+TGG | + | chr2.3:24588964-24588983 | MS.gene060945:CDS | 50.0% | |
! | AGAAGGGGGAGTGTATCAAC+TGG | - | chr2.3:24590145-24590164 | None:intergenic | 50.0% |
! | AGTTTTGCCCAAGGACTTGC+AGG | + | chr2.3:24588251-24588270 | MS.gene060945:CDS | 50.0% |
! | GAAGGGGGAGTGTATCAACT+GGG | - | chr2.3:24590144-24590163 | None:intergenic | 50.0% |
! | GTCTCTAAGTTGGGGAAAGC+AGG | - | chr2.3:24588591-24588610 | None:intergenic | 50.0% |
!! | TGGTCTTTGGAATGGTCTGG+AGG | + | chr2.3:24588324-24588343 | MS.gene060945:CDS | 50.0% |
CAGAATAAGCTCCCTTGCGG+TGG | - | chr2.3:24590910-24590929 | None:intergenic | 55.0% | |
GGTGGGTGATTGTGCTGGAT+TGG | + | chr2.3:24591328-24591347 | MS.gene060945:intron | 55.0% | |
TAGTGTTAGACAGACGCGGC+TGG | + | chr2.3:24589700-24589719 | MS.gene060945:CDS | 55.0% | |
TTGGAGGTGGGTGATTGTGC+TGG | + | chr2.3:24591323-24591342 | MS.gene060945:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 24587820 | 24591829 | 24587820 | ID=MS.gene060945 |
chr2.3 | mRNA | 24587820 | 24591829 | 24587820 | ID=MS.gene060945.t1;Parent=MS.gene060945 |
chr2.3 | exon | 24587820 | 24588504 | 24587820 | ID=MS.gene060945.t1.exon1;Parent=MS.gene060945.t1 |
chr2.3 | CDS | 24587820 | 24588504 | 24587820 | ID=cds.MS.gene060945.t1;Parent=MS.gene060945.t1 |
chr2.3 | exon | 24588801 | 24589003 | 24588801 | ID=MS.gene060945.t1.exon2;Parent=MS.gene060945.t1 |
chr2.3 | CDS | 24588801 | 24589003 | 24588801 | ID=cds.MS.gene060945.t1;Parent=MS.gene060945.t1 |
chr2.3 | exon | 24589095 | 24589376 | 24589095 | ID=MS.gene060945.t1.exon3;Parent=MS.gene060945.t1 |
chr2.3 | CDS | 24589095 | 24589376 | 24589095 | ID=cds.MS.gene060945.t1;Parent=MS.gene060945.t1 |
chr2.3 | exon | 24589626 | 24590177 | 24589626 | ID=MS.gene060945.t1.exon4;Parent=MS.gene060945.t1 |
chr2.3 | CDS | 24589626 | 24590177 | 24589626 | ID=cds.MS.gene060945.t1;Parent=MS.gene060945.t1 |
chr2.3 | exon | 24590900 | 24591220 | 24590900 | ID=MS.gene060945.t1.exon5;Parent=MS.gene060945.t1 |
chr2.3 | CDS | 24590900 | 24591220 | 24590900 | ID=cds.MS.gene060945.t1;Parent=MS.gene060945.t1 |
chr2.3 | exon | 24591498 | 24591719 | 24591498 | ID=MS.gene060945.t1.exon6;Parent=MS.gene060945.t1 |
chr2.3 | CDS | 24591498 | 24591719 | 24591498 | ID=cds.MS.gene060945.t1;Parent=MS.gene060945.t1 |
chr2.3 | exon | 24591812 | 24591829 | 24591812 | ID=MS.gene060945.t1.exon7;Parent=MS.gene060945.t1 |
chr2.3 | CDS | 24591812 | 24591829 | 24591812 | ID=cds.MS.gene060945.t1;Parent=MS.gene060945.t1 |
Gene Sequence |
Protein sequence |