Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061332.t1 | XP_003609844.1 | 94.8 | 652 | 33 | 1 | 1 | 652 | 1 | 651 | 0.00E+00 | 1213.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061332.t1 | Q9LJE5 | 37.1 | 560 | 276 | 15 | 7 | 503 | 62 | 608 | 2.4e-76 | 288.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061332.t1 | G7JQ12 | 94.8 | 652 | 33 | 1 | 1 | 652 | 1 | 651 | 0.0e+00 | 1213.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057682 | MS.gene061332 | 0.803231 | 3.85E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 149 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTCTCGGCTGTTAGTTAC+AGG | 0.207434 | 8.4:-11139993 | None:intergenic |
| ATTTCTTCTGTTCTGAATAT+TGG | 0.221213 | 8.4:+11140816 | MS.gene061332:CDS |
| TTTATCATGTGCCACTTTAC+AGG | 0.241019 | 8.4:-11139915 | None:intergenic |
| TAGAAGCGGTGATGTATTAT+TGG | 0.272352 | 8.4:+11139354 | MS.gene061332:CDS |
| GACTATGGATCTAATGCTAA+TGG | 0.294071 | 8.4:+11139274 | MS.gene061332:CDS |
| ATCATAGCACCTGGAATATA+AGG | 0.296402 | 8.4:-11138268 | None:intergenic |
| TTGATAGGCAGATGATGTTT+TGG | 0.300677 | 8.4:-11139409 | None:intergenic |
| TACCCTGCTCCCACCAATTA+CGG | 0.302628 | 8.4:+11137868 | MS.gene061332:CDS |
| TGTACAATAAAACCCGTAAT+TGG | 0.304533 | 8.4:-11137881 | None:intergenic |
| TCAATTGGTTCTGTATTAGA+TGG | 0.309724 | 8.4:-11140876 | None:intergenic |
| TTGCCTGCCTGTAGAGATCT+TGG | 0.313418 | 8.4:-11140987 | None:intergenic |
| TTAGCAATTTCATTGTCAAT+AGG | 0.315116 | 8.4:-11139511 | None:intergenic |
| AGAAAAGCTACTGGAAAATC+TGG | 0.315736 | 8.4:+11139652 | MS.gene061332:CDS |
| GTATATTACACACCTAACTA+TGG | 0.315879 | 8.4:+11138214 | MS.gene061332:CDS |
| GTTTCGTCTCTACCTGTCTT+GGG | 0.344280 | 8.4:-11140854 | None:intergenic |
| TTTATACTGATCAATATAAC+AGG | 0.344509 | 8.4:+11139479 | MS.gene061332:CDS |
| GAGCTGCCCCGTTGAGTAAT+GGG | 0.349853 | 8.4:+11139245 | MS.gene061332:CDS |
| ACTTCTGGCAGCAAGATAAA+TGG | 0.351298 | 8.4:+11139880 | MS.gene061332:CDS |
| CTCTACCTGTCTTGGGGTAA+TGG | 0.360665 | 8.4:-11140847 | None:intergenic |
| TAGCAATTTCATTGTCAATA+GGG | 0.363005 | 8.4:-11139510 | None:intergenic |
| GCTTCTGTCAATAGACTTGA+TGG | 0.366272 | 8.4:+11138436 | MS.gene061332:CDS |
| TATTATTGGGTGAACAAAAT+CGG | 0.371689 | 8.4:+11139368 | MS.gene061332:CDS |
| TCAATGCAAGTCAGAGTTAA+TGG | 0.373259 | 8.4:+11140915 | MS.gene061332:CDS |
| TATATTCCAGGTGCTATGAT+TGG | 0.373959 | 8.4:+11138271 | MS.gene061332:CDS |
| AATATAAGTTGGCGAAGAAA+TGG | 0.379570 | 8.4:-11138353 | None:intergenic |
| CCATACAATCCTTATATTCC+AGG | 0.381940 | 8.4:+11138259 | MS.gene061332:CDS |
| ACCCTGCTCCCACCAATTAC+GGG | 0.382161 | 8.4:+11137869 | MS.gene061332:CDS |
| CTCACCGTGTACTGAATATC+AGG | 0.385752 | 8.4:-11138082 | None:intergenic |
| TGTTGACATCAATAAGGATA+TGG | 0.386422 | 8.4:+11139857 | MS.gene061332:CDS |
| ATTGGAGTTGATGGTTCATT+TGG | 0.388143 | 8.4:+11138289 | MS.gene061332:CDS |
| CTCCTTTGAATTGATTATGA+TGG | 0.392180 | 8.4:-11139225 | None:intergenic |
| GCAAAGAAAGATTCGACAAA+TGG | 0.395866 | 8.4:+11138583 | MS.gene061332:CDS |
| TCAATAAGGATATGGACTTC+TGG | 0.398499 | 8.4:+11139865 | MS.gene061332:CDS |
| ATATAAGTTGGCGAAGAAAT+GGG | 0.400966 | 8.4:-11138352 | None:intergenic |
| AAGTTTCTAATGAAGGGTTT+TGG | 0.402265 | 8.4:+11140582 | MS.gene061332:CDS |
| GAAAACTAAGTTTCTAATGA+AGG | 0.407105 | 8.4:+11140575 | MS.gene061332:CDS |
| ACCGCTTCTATTTACATCAC+TGG | 0.408688 | 8.4:-11139341 | None:intergenic |
| CAGAAAACCCATTACTCAAC+GGG | 0.408797 | 8.4:-11139252 | None:intergenic |
| GGTTTCGTCTCTACCTGTCT+TGG | 0.414202 | 8.4:-11140855 | None:intergenic |
| TAAGGATTGTATGGATTGTA+TGG | 0.416713 | 8.4:-11138250 | None:intergenic |
| TGCTTCATCACCTTCCCATC+AGG | 0.416964 | 8.4:+11138636 | MS.gene061332:CDS |
| AACCCGTAATTGGTGGGAGC+AGG | 0.422335 | 8.4:-11137871 | None:intergenic |
| TGGTCCTGTTGACATCAATA+AGG | 0.423599 | 8.4:+11139851 | MS.gene061332:CDS |
| ATCTCCCGACTTTGCTGTAT+AGG | 0.424723 | 8.4:-11139434 | None:intergenic |
| TCCTTTGAATTGATTATGAT+GGG | 0.425302 | 8.4:-11139224 | None:intergenic |
| CACTACATCTGTGGATGAAA+AGG | 0.427457 | 8.4:+11140764 | MS.gene061332:CDS |
| ATCAGACAAGTTCCTTCCTC+AGG | 0.430873 | 8.4:+11138530 | MS.gene061332:CDS |
| CCTGGAATATAAGGATTGTA+TGG | 0.432058 | 8.4:-11138259 | None:intergenic |
| TTTGCTGTATAGGCTTTGAT+AGG | 0.432522 | 8.4:-11139424 | None:intergenic |
| TTTGCCAAAGCATTAGCTCT+TGG | 0.434436 | 8.4:-11138565 | None:intergenic |
| GGTGCTATGATTGGAGTTGA+TGG | 0.439110 | 8.4:+11138280 | MS.gene061332:CDS |
| ATTATTGGGTGAACAAAATC+GGG | 0.439439 | 8.4:+11139369 | MS.gene061332:CDS |
| CTGGGAGCAACATGAACCTT+TGG | 0.447906 | 8.4:-11139322 | None:intergenic |
| ATATCCTTATTGATGTCAAC+AGG | 0.450331 | 8.4:-11139855 | None:intergenic |
| GATAATGTATAGAAAGGGTC+TGG | 0.450752 | 8.4:+11140458 | MS.gene061332:intron |
| AGAAGCGGTGATGTATTATT+GGG | 0.451767 | 8.4:+11139355 | MS.gene061332:CDS |
| ATGTGCCTAAAATTTCCATT+TGG | 0.458334 | 8.4:-11139945 | None:intergenic |
| GGAGTTGATGGTTCATTTGG+AGG | 0.459454 | 8.4:+11138292 | MS.gene061332:CDS |
| AGCATTAGCTCTTGGCCCCT+CGG | 0.460855 | 8.4:-11138557 | None:intergenic |
| CCGACTGTGACAACATCAAT+TGG | 0.462977 | 8.4:-11140891 | None:intergenic |
| ATGATAAAAGATGTGCCAAA+TGG | 0.472322 | 8.4:+11139930 | MS.gene061332:CDS |
| AAATTAAGAAAACCACTGTT+AGG | 0.473007 | 8.4:-11138613 | None:intergenic |
| GATTTGAATCACCTGGTGAA+TGG | 0.474628 | 8.4:+11138026 | MS.gene061332:CDS |
| GACTGTGCAAATCCATAGTT+AGG | 0.475651 | 8.4:-11138226 | None:intergenic |
| ACTATGGATCTAATGCTAAT+GGG | 0.477126 | 8.4:+11139275 | MS.gene061332:CDS |
| AAAACATTATTCAGCTTTCG+AGG | 0.481363 | 8.4:-11140627 | None:intergenic |
| CCTCCTGCATGACCTTCTGT+CGG | 0.484140 | 8.4:-11140551 | None:intergenic |
| ATGGGGCAAAACATTTCCAT+TGG | 0.484243 | 8.4:-11139206 | None:intergenic |
| TTAGGTGTGTAATATACATA+AGG | 0.485977 | 8.4:-11138208 | None:intergenic |
| ACCGAAAAGAAAAGAAAGAT+AGG | 0.487885 | 8.4:-11139682 | None:intergenic |
| TGTGCAGATAATGTATAGAA+AGG | 0.489425 | 8.4:+11140452 | MS.gene061332:intron |
| ATTTGAATCACCTGGTGAAT+GGG | 0.489938 | 8.4:+11138027 | MS.gene061332:CDS |
| CCCCATCATAATCAATTCAA+AGG | 0.497677 | 8.4:+11139223 | MS.gene061332:CDS |
| AAAACTAAGTTTCTAATGAA+GGG | 0.499233 | 8.4:+11140576 | MS.gene061332:CDS |
| TTCATCCACAGATGTAGTGC+TGG | 0.503907 | 8.4:-11140760 | None:intergenic |
| CAAAGCCTATACAGCAAAGT+CGG | 0.507526 | 8.4:+11139429 | MS.gene061332:CDS |
| GAACTTGTCTGATTTGATGA+TGG | 0.508845 | 8.4:-11138520 | None:intergenic |
| GAACTATGATGAAAATTGTC+TGG | 0.512526 | 8.4:-11138388 | None:intergenic |
| TGTATACCTCTTGTGTGTCT+CGG | 0.513829 | 8.4:-11140007 | None:intergenic |
| GATGCTAGGAGAAAAGCTAC+TGG | 0.514734 | 8.4:+11139643 | MS.gene061332:CDS |
| GGGGCCAAGAGCTAATGCTT+TGG | 0.515241 | 8.4:+11138561 | MS.gene061332:CDS |
| ACTTGATCCAAGATCTCTAC+AGG | 0.515937 | 8.4:+11140980 | MS.gene061332:CDS |
| GCATTAGCTCTTGGCCCCTC+GGG | 0.520251 | 8.4:-11138556 | None:intergenic |
| CCGCTTCTATTTACATCACT+GGG | 0.521176 | 8.4:-11139340 | None:intergenic |
| TGAACAAGAGGAATATAAGT+TGG | 0.522275 | 8.4:-11138364 | None:intergenic |
| GGAGCTGCCCCGTTGAGTAA+TGG | 0.524236 | 8.4:+11139244 | MS.gene061332:CDS |
| GTCAATAGACTTGATGGAAG+AGG | 0.526422 | 8.4:+11138442 | MS.gene061332:CDS |
| TTTCGAGGTGGCGCCAACAC+TGG | 0.533894 | 8.4:-11140612 | None:intergenic |
| TCCTTCCTCAGGGTACCCGA+GGG | 0.534598 | 8.4:+11138541 | MS.gene061332:CDS |
| TTATCATGTGCCACTTTACA+GGG | 0.536336 | 8.4:-11139914 | None:intergenic |
| TTCCTTCCTCAGGGTACCCG+AGG | 0.539305 | 8.4:+11138540 | MS.gene061332:CDS |
| TGGTGGTCCTCCCATTCACC+AGG | 0.542526 | 8.4:-11138037 | None:intergenic |
| GTGCAGATAATGTATAGAAA+GGG | 0.542850 | 8.4:+11140453 | MS.gene061332:intron |
| ACCCGTAATTGGTGGGAGCA+GGG | 0.547180 | 8.4:-11137870 | None:intergenic |
| CTCTGATCAACAACAAACTC+AGG | 0.549896 | 8.4:-11137838 | None:intergenic |
| AAAGCCTATACAGCAAAGTC+GGG | 0.551116 | 8.4:+11139430 | MS.gene061332:CDS |
| TGTGGAGTTGCTGAGATGGT+TGG | 0.557085 | 8.4:+11139831 | MS.gene061332:CDS |
| GGGTAAGCTTATTACCTGAT+GGG | 0.560408 | 8.4:-11138650 | None:intergenic |
| ACAATAAAACCCGTAATTGG+TGG | 0.560985 | 8.4:-11137878 | None:intergenic |
| TGTAGAGATCTTGGATCAAG+TGG | 0.562297 | 8.4:-11140978 | None:intergenic |
| TGCAGTTTCTTGTTTCCATG+AGG | 0.563498 | 8.4:-11139607 | None:intergenic |
| AATTTAAAGACAGATGAACT+TGG | 0.563613 | 8.4:+11140678 | MS.gene061332:CDS |
| TGGCTAGGATTTGAATCACC+TGG | 0.564541 | 8.4:+11138019 | MS.gene061332:intron |
| AAATTGTCTGGTTGAACAAG+AGG | 0.565932 | 8.4:-11138376 | None:intergenic |
| TATAAGTTGGCGAAGAAATG+GGG | 0.569498 | 8.4:-11138351 | None:intergenic |
| GTGTGGTCATCAACACCTCA+TGG | 0.572729 | 8.4:+11139592 | MS.gene061332:CDS |
| ATCGGGGCCCTAGAATTAGT+AGG | 0.574334 | 8.4:+11139386 | MS.gene061332:CDS |
| CCAATTGATGTTGTCACAGT+CGG | 0.582496 | 8.4:+11140891 | MS.gene061332:CDS |
| GTGGGAGCTTCCCTGTAAAG+TGG | 0.586968 | 8.4:+11139904 | MS.gene061332:CDS |
| AACTCCACAAAATTGACCGC+TGG | 0.588632 | 8.4:-11139817 | None:intergenic |
| CCCAGTGATGTAAATAGAAG+CGG | 0.589037 | 8.4:+11139340 | MS.gene061332:CDS |
| AAGCTTATTACCTGATGGGA+AGG | 0.591653 | 8.4:-11138646 | None:intergenic |
| CAATAAAACCCGTAATTGGT+GGG | 0.592162 | 8.4:-11137877 | None:intergenic |
| AGTCACCATTACCCCAAGAC+AGG | 0.594914 | 8.4:+11140842 | MS.gene061332:CDS |
| CCCCTCGGGTACCCTGAGGA+AGG | 0.595318 | 8.4:-11138542 | None:intergenic |
| GATCCAAGATCTCTACAGGC+AGG | 0.595943 | 8.4:+11140984 | MS.gene061332:CDS |
| AAACCGACAGAAGGTCATGC+AGG | 0.599786 | 8.4:+11140548 | MS.gene061332:CDS |
| AATTGCTAAACTTCGACCAA+AGG | 0.600391 | 8.4:+11139306 | MS.gene061332:CDS |
| ACATACTTCAATTTCAAATG+CGG | 0.601687 | 8.4:+11140710 | MS.gene061332:CDS |
| AGATCTCTACAGGCAGGCAA+AGG | 0.607123 | 8.4:+11140990 | MS.gene061332:CDS |
| TTTCGTCTCTACCTGTCTTG+GGG | 0.609585 | 8.4:-11140853 | None:intergenic |
| TCAACTCCAATCATAGCACC+TGG | 0.611265 | 8.4:-11138277 | None:intergenic |
| GGCAGCAAGATAAATGGAGT+GGG | 0.612024 | 8.4:+11139886 | MS.gene061332:CDS |
| AGAGTGCTTATGAAGATGCT+AGG | 0.613434 | 8.4:+11139629 | MS.gene061332:CDS |
| TGAATCACCTGGTGAATGGG+AGG | 0.616103 | 8.4:+11138030 | MS.gene061332:CDS |
| TTCAAAGACATGTTTAACGA+AGG | 0.618250 | 8.4:+11137811 | None:intergenic |
| TTACTATGAAAACCGACAGA+AGG | 0.618618 | 8.4:+11140539 | MS.gene061332:CDS |
| CCTTTGAATTGATTATGATG+GGG | 0.619417 | 8.4:-11139223 | None:intergenic |
| TGTCACCAGCACTACATCTG+TGG | 0.635296 | 8.4:+11140755 | MS.gene061332:CDS |
| TGGCAGCAAGATAAATGGAG+TGG | 0.635971 | 8.4:+11139885 | MS.gene061332:CDS |
| TCAGACAAGTTCCTTCCTCA+GGG | 0.638045 | 8.4:+11138531 | MS.gene061332:CDS |
| TCAGAAAACCCATTACTCAA+CGG | 0.638768 | 8.4:-11139253 | None:intergenic |
| AATGGAAGTGTTCCTAACAG+TGG | 0.638957 | 8.4:+11138601 | MS.gene061332:CDS |
| TCAATGTAGGTTAATGCCAG+CGG | 0.649389 | 8.4:+11139801 | MS.gene061332:intron |
| ACATTATTCAGCTTTCGAGG+TGG | 0.659451 | 8.4:-11140624 | None:intergenic |
| AAAGCTACTGGAAAATCTGG+AGG | 0.667052 | 8.4:+11139655 | MS.gene061332:CDS |
| TGTTATAAAATCATACAGTG+AGG | 0.670580 | 8.4:+11139540 | MS.gene061332:CDS |
| GTAGAGATCTTGGATCAAGT+GGG | 0.673059 | 8.4:-11140977 | None:intergenic |
| TGGTCCTGATATTCAGTACA+CGG | 0.673378 | 8.4:+11138078 | MS.gene061332:CDS |
| TTGGCCCCTCGGGTACCCTG+AGG | 0.673523 | 8.4:-11138546 | None:intergenic |
| AAAGCATTAAATATAACGTG+TGG | 0.673580 | 8.4:+11139575 | MS.gene061332:CDS |
| TAACAGCCGAGACACACAAG+AGG | 0.680258 | 8.4:+11140001 | MS.gene061332:CDS |
| CCTTCCTCAGGGTACCCGAG+GGG | 0.684367 | 8.4:+11138542 | MS.gene061332:CDS |
| CCGACAGAAGGTCATGCAGG+AGG | 0.689597 | 8.4:+11140551 | MS.gene061332:CDS |
| TGAAAAGGTTGAGAATGATG+TGG | 0.715647 | 8.4:+11140779 | MS.gene061332:CDS |
| TTATTGGGTGAACAAAATCG+GGG | 0.719539 | 8.4:+11139370 | MS.gene061332:CDS |
| TTATACTGATCAATATAACA+GGG | 0.725652 | 8.4:+11139480 | MS.gene061332:CDS |
| TACTGATCAATATAACAGGG+AGG | 0.738774 | 8.4:+11139483 | MS.gene061332:CDS |
| AGAAAACCCATTACTCAACG+GGG | 0.769685 | 8.4:-11139251 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTATATACCTTTTAA+AGG | + | chr8.4:11140317-11140336 | MS.gene061332:intron | 15.0% |
| !! | AAAACTAAGTTTCTAATGAA+GGG | + | chr8.4:11140576-11140595 | MS.gene061332:CDS | 20.0% |
| !! | TTATACTGATCAATATAACA+GGG | + | chr8.4:11139480-11139499 | MS.gene061332:CDS | 20.0% |
| !! | TTTATACTGATCAATATAAC+AGG | + | chr8.4:11139479-11139498 | MS.gene061332:CDS | 20.0% |
| !!! | ATGGTACTTTTTTTATGAAA+AGG | + | chr8.4:11138949-11138968 | MS.gene061332:intron | 20.0% |
| !!! | TTTTCATAAAAAAAGTACCA+TGG | - | chr8.4:11138950-11138969 | None:intergenic | 20.0% |
| ! | AAATTAAGAAAACCACTGTT+AGG | - | chr8.4:11138616-11138635 | None:intergenic | 25.0% |
| ! | AAATTCCAATATAGCTCAAA+AGG | - | chr8.4:11138674-11138693 | None:intergenic | 25.0% |
| ! | AATTCCAATATAGCTCAAAA+GGG | - | chr8.4:11138673-11138692 | None:intergenic | 25.0% |
| ! | AATTTAAAGACAGATGAACT+TGG | + | chr8.4:11140678-11140697 | MS.gene061332:CDS | 25.0% |
| ! | ACATACTTCAATTTCAAATG+CGG | + | chr8.4:11140710-11140729 | MS.gene061332:CDS | 25.0% |
| ! | ATTGTTCGAATTTGTGAATA+TGG | + | chr8.4:11140150-11140169 | MS.gene061332:intron | 25.0% |
| ! | GAAAACTAAGTTTCTAATGA+AGG | + | chr8.4:11140575-11140594 | MS.gene061332:CDS | 25.0% |
| ! | GTCAAAATTATATTAACAGC+AGG | - | chr8.4:11140412-11140431 | None:intergenic | 25.0% |
| ! | TAAAATTGATAAGTGTTCCT+GGG | + | chr8.4:11140061-11140080 | MS.gene061332:intron | 25.0% |
| ! | TAACCTACATTGAAAAAGAA+CGG | - | chr8.4:11139794-11139813 | None:intergenic | 25.0% |
| ! | TAGCAAGTTACTACTATTAT+AGG | + | chr8.4:11138915-11138934 | MS.gene061332:intron | 25.0% |
| ! | TAGCAATTTCATTGTCAATA+GGG | - | chr8.4:11139513-11139532 | None:intergenic | 25.0% |
| ! | TATTATTGGGTGAACAAAAT+CGG | + | chr8.4:11139368-11139387 | MS.gene061332:CDS | 25.0% |
| ! | TCCTTTGAATTGATTATGAT+GGG | - | chr8.4:11139227-11139246 | None:intergenic | 25.0% |
| ! | TGTTATAAAATCATACAGTG+AGG | + | chr8.4:11139540-11139559 | MS.gene061332:CDS | 25.0% |
| ! | TTAAAATTGATAAGTGTTCC+TGG | + | chr8.4:11140060-11140079 | MS.gene061332:intron | 25.0% |
| ! | TTAGCAATTTCATTGTCAAT+AGG | - | chr8.4:11139514-11139533 | None:intergenic | 25.0% |
| ! | TTAGGTGTGTAATATACATA+AGG | - | chr8.4:11138211-11138230 | None:intergenic | 25.0% |
| !! | AAAGCATTAAATATAACGTG+TGG | + | chr8.4:11139575-11139594 | MS.gene061332:CDS | 25.0% |
| !! | ATTTCTTCTGTTCTGAATAT+TGG | + | chr8.4:11140816-11140835 | MS.gene061332:CDS | 25.0% |
| !! | TCCTATCTTTCTTTTCTTTT+CGG | + | chr8.4:11139681-11139700 | MS.gene061332:CDS | 25.0% |
| !!! | TAAAAAAAGTACCATGGAAA+AGG | - | chr8.4:11138944-11138963 | None:intergenic | 25.0% |
| !!! | TACATAAGTTTTAGAAGTAC+AGG | - | chr8.4:11139733-11139752 | None:intergenic | 25.0% |
| !!! | TTATTAGTTTGTGAACTTTG+TGG | + | chr8.4:11138999-11139018 | MS.gene061332:intron | 25.0% |
| AAAAATAATCACCGTACCTT+TGG | + | chr8.4:11137913-11137932 | MS.gene061332:intron | 30.0% | |
| AAAACATTATTCAGCTTTCG+AGG | - | chr8.4:11140630-11140649 | None:intergenic | 30.0% | |
| AAACATGTCAAAAGCAAAAG+TGG | - | chr8.4:11138865-11138884 | None:intergenic | 30.0% | |
| AACATGTCAAAAGCAAAAGT+GGG | - | chr8.4:11138864-11138883 | None:intergenic | 30.0% | |
| AACCTACATTGAAAAAGAAC+GGG | - | chr8.4:11139793-11139812 | None:intergenic | 30.0% | |
| ACCGAAAAGAAAAGAAAGAT+AGG | - | chr8.4:11139685-11139704 | None:intergenic | 30.0% | |
| ACTATGGATCTAATGCTAAT+GGG | + | chr8.4:11139275-11139294 | MS.gene061332:CDS | 30.0% | |
| ATATCCTTATTGATGTCAAC+AGG | - | chr8.4:11139858-11139877 | None:intergenic | 30.0% | |
| ATGATAAAAGATGTGCCAAA+TGG | + | chr8.4:11139930-11139949 | MS.gene061332:CDS | 30.0% | |
| ATGTGCCTAAAATTTCCATT+TGG | - | chr8.4:11139948-11139967 | None:intergenic | 30.0% | |
| ATTATTGGGTGAACAAAATC+GGG | + | chr8.4:11139369-11139388 | MS.gene061332:CDS | 30.0% | |
| CATAAGCTGGTAAAAAATGT+GGG | + | chr8.4:11140340-11140359 | MS.gene061332:intron | 30.0% | |
| CATCTACACCAAAAATTCTA+TGG | - | chr8.4:11138060-11138079 | None:intergenic | 30.0% | |
| CCTTTGAATTGATTATGATG+GGG | - | chr8.4:11139226-11139245 | None:intergenic | 30.0% | |
| CTCCTTTGAATTGATTATGA+TGG | - | chr8.4:11139228-11139247 | None:intergenic | 30.0% | |
| GAACTATGATGAAAATTGTC+TGG | - | chr8.4:11138391-11138410 | None:intergenic | 30.0% | |
| GAATAGTGTGTTTATATGGA+AGG | + | chr8.4:11138801-11138820 | MS.gene061332:intron | 30.0% | |
| GTATATTACACACCTAACTA+TGG | + | chr8.4:11138214-11138233 | MS.gene061332:CDS | 30.0% | |
| GTGCAGATAATGTATAGAAA+GGG | + | chr8.4:11140453-11140472 | MS.gene061332:intron | 30.0% | |
| TACTCAATTGTTTCCTAACA+AGG | - | chr8.4:11140181-11140200 | None:intergenic | 30.0% | |
| TCAACTAAAAACTTGCATGT+CGG | - | chr8.4:11140098-11140117 | None:intergenic | 30.0% | |
| TGAACAAGAGGAATATAAGT+TGG | - | chr8.4:11138367-11138386 | None:intergenic | 30.0% | |
| TGTACAATAAAACCCGTAAT+TGG | - | chr8.4:11137884-11137903 | None:intergenic | 30.0% | |
| TGTCTCAATGATGTAAATGT+TGG | + | chr8.4:11140283-11140302 | MS.gene061332:intron | 30.0% | |
| TGTGCAGATAATGTATAGAA+AGG | + | chr8.4:11140452-11140471 | MS.gene061332:intron | 30.0% | |
| TGTTGACATCAATAAGGATA+TGG | + | chr8.4:11139857-11139876 | MS.gene061332:CDS | 30.0% | |
| TTACATCATTGAGACAATCA+AGG | - | chr8.4:11140279-11140298 | None:intergenic | 30.0% | |
| TTGTTAGGAAACAATTGAGT+AGG | + | chr8.4:11140180-11140199 | MS.gene061332:intron | 30.0% | |
| ! | AAATGCTTCTTTCTTTTCCA+GGG | + | chr8.4:11138166-11138185 | MS.gene061332:intron | 30.0% |
| ! | AAATTTTTCTCATCACTTGC+AGG | - | chr8.4:11140663-11140682 | None:intergenic | 30.0% |
| ! | AAGTTTCTAATGAAGGGTTT+TGG | + | chr8.4:11140582-11140601 | MS.gene061332:CDS | 30.0% |
| ! | AATATAAGTTGGCGAAGAAA+TGG | - | chr8.4:11138356-11138375 | None:intergenic | 30.0% |
| ! | AATTGTGTTGTTGTATTTGC+TGG | + | chr8.4:11139052-11139071 | MS.gene061332:intron | 30.0% |
| ! | ATAGCTATATTTTCCTTCTG+TGG | + | chr8.4:11139132-11139151 | MS.gene061332:intron | 30.0% |
| ! | ATATAAGTTGGCGAAGAAAT+GGG | - | chr8.4:11138355-11138374 | None:intergenic | 30.0% |
| ! | ATGTGCCAAATGGAAATTTT+AGG | + | chr8.4:11139940-11139959 | MS.gene061332:CDS | 30.0% |
| ! | GTGTTTATATGGAAGGATTT+TGG | + | chr8.4:11138808-11138827 | MS.gene061332:intron | 30.0% |
| ! | TAAATGCTTCTTTCTTTTCC+AGG | + | chr8.4:11138165-11138184 | MS.gene061332:intron | 30.0% |
| ! | TAAGGATTGTATGGATTGTA+TGG | - | chr8.4:11138253-11138272 | None:intergenic | 30.0% |
| ! | TTTTATGAAAAGGACATGCT+TGG | + | chr8.4:11138959-11138978 | MS.gene061332:intron | 30.0% |
| !! | AAAGGTACGGTGATTATTTT+TGG | - | chr8.4:11137914-11137933 | None:intergenic | 30.0% |
| !! | AAATGGGGTTTTGATAATTG+GGG | - | chr8.4:11138339-11138358 | None:intergenic | 30.0% |
| !! | AGAAATGGGGTTTTGATAAT+TGG | - | chr8.4:11138341-11138360 | None:intergenic | 30.0% |
| !! | CTTTTGCTTTTGACATGTTT+AGG | + | chr8.4:11138865-11138884 | MS.gene061332:intron | 30.0% |
| !! | GAAATGGGGTTTTGATAATT+GGG | - | chr8.4:11138340-11138359 | None:intergenic | 30.0% |
| !! | TCAATTGGTTCTGTATTAGA+TGG | - | chr8.4:11140879-11140898 | None:intergenic | 30.0% |
| !!! | AATTACGGGTTTTATTGTAC+AGG | + | chr8.4:11137883-11137902 | MS.gene061332:CDS | 30.0% |
| !!! | CATAGAATTTTTGGTGTAGA+TGG | + | chr8.4:11138058-11138077 | MS.gene061332:CDS | 30.0% |
| !!! | TCTGTAGATACTTTTTCCAA+TGG | + | chr8.4:11139190-11139209 | MS.gene061332:CDS | 30.0% |
| AAATTGTCTGGTTGAACAAG+AGG | - | chr8.4:11138379-11138398 | None:intergenic | 35.0% | |
| AATTATGTGTGCATGCGATT+AGG | - | chr8.4:11140220-11140239 | None:intergenic | 35.0% | |
| AATTGCTAAACTTCGACCAA+AGG | + | chr8.4:11139306-11139325 | MS.gene061332:CDS | 35.0% | |
| ACAATAAAACCCGTAATTGG+TGG | - | chr8.4:11137881-11137900 | None:intergenic | 35.0% | |
| ACATGTCAAAAGCAAAAGTG+GGG | - | chr8.4:11138863-11138882 | None:intergenic | 35.0% | |
| AGAAAAGCTACTGGAAAATC+TGG | + | chr8.4:11139652-11139671 | MS.gene061332:CDS | 35.0% | |
| AGAAGCGGTGATGTATTATT+GGG | + | chr8.4:11139355-11139374 | MS.gene061332:CDS | 35.0% | |
| ATCATAGCACCTGGAATATA+AGG | - | chr8.4:11138271-11138290 | None:intergenic | 35.0% | |
| ATTATCTGCACATGAGGAAT+GGG | - | chr8.4:11140444-11140463 | None:intergenic | 35.0% | |
| ATTTGAATCACCTGGTGAAT+GGG | + | chr8.4:11138027-11138046 | MS.gene061332:CDS | 35.0% | |
| CAATAAAACCCGTAATTGGT+GGG | - | chr8.4:11137880-11137899 | None:intergenic | 35.0% | |
| CCATACAATCCTTATATTCC+AGG | + | chr8.4:11138259-11138278 | MS.gene061332:CDS | 35.0% | |
| CCCCATCATAATCAATTCAA+AGG | + | chr8.4:11139223-11139242 | MS.gene061332:CDS | 35.0% | |
| CCTGGAATATAAGGATTGTA+TGG | - | chr8.4:11138262-11138281 | None:intergenic | 35.0% | |
| CTACACCAAAAATTCTATGG+TGG | - | chr8.4:11138057-11138076 | None:intergenic | 35.0% | |
| CTATACATTATCTGCACATG+AGG | - | chr8.4:11140450-11140469 | None:intergenic | 35.0% | |
| GACTATGGATCTAATGCTAA+TGG | + | chr8.4:11139274-11139293 | MS.gene061332:CDS | 35.0% | |
| GATAATGTATAGAAAGGGTC+TGG | + | chr8.4:11140458-11140477 | MS.gene061332:intron | 35.0% | |
| GCAAAGAAAGATTCGACAAA+TGG | + | chr8.4:11138583-11138602 | MS.gene061332:CDS | 35.0% | |
| GCATAAGCTGGTAAAAAATG+TGG | + | chr8.4:11140339-11140358 | MS.gene061332:intron | 35.0% | |
| GCTGGAATAGTGTGTTTATA+TGG | + | chr8.4:11138797-11138816 | MS.gene061332:intron | 35.0% | |
| GTACACGATATATGATCAAC+CGG | - | chr8.4:11137953-11137972 | None:intergenic | 35.0% | |
| TACCAGCTTATGCCTTTAAA+AGG | - | chr8.4:11140332-11140351 | None:intergenic | 35.0% | |
| TACTGATCAATATAACAGGG+AGG | + | chr8.4:11139483-11139502 | MS.gene061332:CDS | 35.0% | |
| TAGAAGCGGTGATGTATTAT+TGG | + | chr8.4:11139354-11139373 | MS.gene061332:CDS | 35.0% | |
| TAGCCACAAAAAATACCAAG+TGG | - | chr8.4:11138005-11138024 | None:intergenic | 35.0% | |
| TATGACACACAAGACACATA+CGG | - | chr8.4:11138125-11138144 | None:intergenic | 35.0% | |
| TCAATAAGGATATGGACTTC+TGG | + | chr8.4:11139865-11139884 | MS.gene061332:CDS | 35.0% | |
| TCAATGCAAGTCAGAGTTAA+TGG | + | chr8.4:11140915-11140934 | MS.gene061332:CDS | 35.0% | |
| TCAGAAAACCCATTACTCAA+CGG | - | chr8.4:11139256-11139275 | None:intergenic | 35.0% | |
| TGAAAAGGTTGAGAATGATG+TGG | + | chr8.4:11140779-11140798 | MS.gene061332:CDS | 35.0% | |
| TGTCTTGTGTGTCATATGTT+GGG | + | chr8.4:11138129-11138148 | MS.gene061332:intron | 35.0% | |
| TTACTATGAAAACCGACAGA+AGG | + | chr8.4:11140539-11140558 | MS.gene061332:CDS | 35.0% | |
| TTATTGGGTGAACAAAATCG+GGG | + | chr8.4:11139370-11139389 | MS.gene061332:CDS | 35.0% | |
| ! | AAAGTGTTATCAATGGCAGA+AGG | - | chr8.4:11138834-11138853 | None:intergenic | 35.0% |
| ! | ATTATAGGTCACCTTTTCCA+TGG | + | chr8.4:11138930-11138949 | MS.gene061332:intron | 35.0% |
| ! | CTTACCCTTTTGAGCTATAT+TGG | + | chr8.4:11138666-11138685 | MS.gene061332:intron | 35.0% |
| ! | GAACTTGTCTGATTTGATGA+TGG | - | chr8.4:11138523-11138542 | None:intergenic | 35.0% |
| ! | GAAGCATTTAAATCAGCTGT+CGG | - | chr8.4:11138155-11138174 | None:intergenic | 35.0% |
| ! | GCTTGACAAAGTGTTATCAA+TGG | - | chr8.4:11138841-11138860 | None:intergenic | 35.0% |
| ! | TATAAGTTGGCGAAGAAATG+GGG | - | chr8.4:11138354-11138373 | None:intergenic | 35.0% |
| ! | TATATTCCAGGTGCTATGAT+TGG | + | chr8.4:11138271-11138290 | MS.gene061332:CDS | 35.0% |
| ! | TTGATAGGCAGATGATGTTT+TGG | - | chr8.4:11139412-11139431 | None:intergenic | 35.0% |
| ! | TTTGCTGTATAGGCTTTGAT+AGG | - | chr8.4:11139427-11139446 | None:intergenic | 35.0% |
| ! | TTTTCCTTCTGTGGTATTGT+AGG | + | chr8.4:11139141-11139160 | MS.gene061332:intron | 35.0% |
| !! | AATGGATTTTCTGAGTCTTC+TGG | + | chr8.4:11140933-11140952 | MS.gene061332:CDS | 35.0% |
| !! | ATTGGAGTTGATGGTTCATT+TGG | + | chr8.4:11138289-11138308 | MS.gene061332:CDS | 35.0% |
| !! | GTTTTGGCCTACTAATTCTA+GGG | - | chr8.4:11139396-11139415 | None:intergenic | 35.0% |
| !! | TACCTTTTAAAGGCATAAGC+TGG | + | chr8.4:11140327-11140346 | MS.gene061332:intron | 35.0% |
| !! | TGAGTCTTCTGGTGTTTTAA+AGG | + | chr8.4:11140944-11140963 | MS.gene061332:CDS | 35.0% |
| !! | TGGAAAAAGTATCTACAGAC+TGG | - | chr8.4:11139189-11139208 | None:intergenic | 35.0% |
| !! | TTATCATGTGCCACTTTACA+GGG | - | chr8.4:11139917-11139936 | None:intergenic | 35.0% |
| !! | TTTATCATGTGCCACTTTAC+AGG | - | chr8.4:11139918-11139937 | None:intergenic | 35.0% |
| !! | TTTTGGAAGTATACCAGTGT+TGG | + | chr8.4:11140599-11140618 | MS.gene061332:CDS | 35.0% |
| !!! | ACTTGGTATTTTTTGTGGCT+AGG | + | chr8.4:11138004-11138023 | MS.gene061332:intron | 35.0% |
| !!! | AGTAATGGGTTTTCTGACTA+TGG | + | chr8.4:11139259-11139278 | MS.gene061332:CDS | 35.0% |
| !!! | CTTCTGGTGTTTTAAAGGTT+GGG | + | chr8.4:11140949-11140968 | MS.gene061332:CDS | 35.0% |
| !!! | TCTTCTGGTGTTTTAAAGGT+TGG | + | chr8.4:11140948-11140967 | MS.gene061332:CDS | 35.0% |
| !!! | TGACCACTTGGTATTTTTTG+TGG | + | chr8.4:11137999-11138018 | MS.gene061332:intron | 35.0% |
| !!! | TGTTTTGGCCTACTAATTCT+AGG | - | chr8.4:11139397-11139416 | None:intergenic | 35.0% |
| AAACACACTATTCCAGCCTA+TGG | - | chr8.4:11138794-11138813 | None:intergenic | 40.0% | |
| AAAGCCTATACAGCAAAGTC+GGG | + | chr8.4:11139430-11139449 | MS.gene061332:CDS | 40.0% | |
| AAAGCTACTGGAAAATCTGG+AGG | + | chr8.4:11139655-11139674 | MS.gene061332:CDS | 40.0% | |
| AAGCTTATTACCTGATGGGA+AGG | - | chr8.4:11138649-11138668 | None:intergenic | 40.0% | |
| ACATTATTCAGCTTTCGAGG+TGG | - | chr8.4:11140627-11140646 | None:intergenic | 40.0% | |
| ACCGCTTCTATTTACATCAC+TGG | - | chr8.4:11139344-11139363 | None:intergenic | 40.0% | |
| ACTTCTGGCAGCAAGATAAA+TGG | + | chr8.4:11139880-11139899 | MS.gene061332:CDS | 40.0% | |
| ACTTGATCCAAGATCTCTAC+AGG | + | chr8.4:11140980-11140999 | MS.gene061332:CDS | 40.0% | |
| AGAAAACCCATTACTCAACG+GGG | - | chr8.4:11139254-11139273 | None:intergenic | 40.0% | |
| AGGGTAAGCTTATTACCTGA+TGG | - | chr8.4:11138654-11138673 | None:intergenic | 40.0% | |
| ATGAAAAGGACATGCTTGGA+GGG | + | chr8.4:11138963-11138982 | MS.gene061332:intron | 40.0% | |
| ATGACACACAAGACACATAC+GGG | - | chr8.4:11138124-11138143 | None:intergenic | 40.0% | |
| ATGGGGCAAAACATTTCCAT+TGG | - | chr8.4:11139209-11139228 | None:intergenic | 40.0% | |
| CAAACGCAGTTTGTCAAAAG+AGG | + | chr8.4:11138747-11138766 | MS.gene061332:intron | 40.0% | |
| CAAAGCCTATACAGCAAAGT+CGG | + | chr8.4:11139429-11139448 | MS.gene061332:CDS | 40.0% | |
| CACTACATCTGTGGATGAAA+AGG | + | chr8.4:11140764-11140783 | MS.gene061332:CDS | 40.0% | |
| CAGAAAACCCATTACTCAAC+GGG | - | chr8.4:11139255-11139274 | None:intergenic | 40.0% | |
| CAGTATGACTAATCGAAGGA+AGG | - | chr8.4:11139769-11139788 | None:intergenic | 40.0% | |
| CATGAGGAATGGGTATTTGA+TGG | - | chr8.4:11140434-11140453 | None:intergenic | 40.0% | |
| CATTATCTGCACATGAGGAA+TGG | - | chr8.4:11140445-11140464 | None:intergenic | 40.0% | |
| CCAATTGATGTTGTCACAGT+CGG | + | chr8.4:11140891-11140910 | MS.gene061332:CDS | 40.0% | |
| CCCAGTGATGTAAATAGAAG+CGG | + | chr8.4:11139340-11139359 | MS.gene061332:CDS | 40.0% | |
| CCGCTTCTATTTACATCACT+GGG | - | chr8.4:11139343-11139362 | None:intergenic | 40.0% | |
| CTCTGATCAACAACAAACTC+AGG | - | chr8.4:11137841-11137860 | None:intergenic | 40.0% | |
| GACTGTGCAAATCCATAGTT+AGG | - | chr8.4:11138229-11138248 | None:intergenic | 40.0% | |
| GATTTGAATCACCTGGTGAA+TGG | + | chr8.4:11138026-11138045 | MS.gene061332:CDS | 40.0% | |
| GCTTCTGTCAATAGACTTGA+TGG | + | chr8.4:11138436-11138455 | MS.gene061332:CDS | 40.0% | |
| GGGTAAGCTTATTACCTGAT+GGG | - | chr8.4:11138653-11138672 | None:intergenic | 40.0% | |
| GTAGAGATCTTGGATCAAGT+GGG | - | chr8.4:11140980-11140999 | None:intergenic | 40.0% | |
| GTCAATAGACTTGATGGAAG+AGG | + | chr8.4:11138442-11138461 | MS.gene061332:CDS | 40.0% | |
| GTGTCTTGTGTGTCATATGT+TGG | + | chr8.4:11138128-11138147 | MS.gene061332:intron | 40.0% | |
| TATGAAAAGGACATGCTTGG+AGG | + | chr8.4:11138962-11138981 | MS.gene061332:intron | 40.0% | |
| TCAATGTAGGTTAATGCCAG+CGG | + | chr8.4:11139801-11139820 | MS.gene061332:intron | 40.0% | |
| TGGTCCTGATATTCAGTACA+CGG | + | chr8.4:11138078-11138097 | MS.gene061332:CDS | 40.0% | |
| TGGTCCTGTTGACATCAATA+AGG | + | chr8.4:11139851-11139870 | MS.gene061332:CDS | 40.0% | |
| TGTAGAGATCTTGGATCAAG+TGG | - | chr8.4:11140981-11141000 | None:intergenic | 40.0% | |
| TGTATACCTCTTGTGTGTCT+CGG | - | chr8.4:11140010-11140029 | None:intergenic | 40.0% | |
| ! | AGAGTGCTTATGAAGATGCT+AGG | + | chr8.4:11139629-11139648 | MS.gene061332:CDS | 40.0% |
| ! | ATTTTGTGGAGTTGCTGAGA+TGG | + | chr8.4:11139827-11139846 | MS.gene061332:CDS | 40.0% |
| ! | CTCTTTTGACAAACTGCGTT+TGG | - | chr8.4:11138749-11138768 | None:intergenic | 40.0% |
| ! | GAGGACCACCATAGAATTTT+TGG | + | chr8.4:11138049-11138068 | MS.gene061332:CDS | 40.0% |
| ! | TATGCACTGTATTGACCACT+TGG | + | chr8.4:11137987-11138006 | MS.gene061332:intron | 40.0% |
| ! | TGCAGTTTCTTGTTTCCATG+AGG | - | chr8.4:11139610-11139629 | None:intergenic | 40.0% |
| ! | TTTGCCAAAGCATTAGCTCT+TGG | - | chr8.4:11138568-11138587 | None:intergenic | 40.0% |
| !! | AATGGAAGTGTTCCTAACAG+TGG | + | chr8.4:11138601-11138620 | MS.gene061332:CDS | 40.0% |
| !! | GAATATGGTGTTGCCTTGTT+AGG | + | chr8.4:11140165-11140184 | MS.gene061332:intron | 40.0% |
| !!! | GACCCGTTCTTTTTCAATGT+AGG | + | chr8.4:11139788-11139807 | MS.gene061332:intron | 40.0% |
| AACTCCACAAAATTGACCGC+TGG | - | chr8.4:11139820-11139839 | None:intergenic | 45.0% | |
| AACTTTCATCTTGTGCACCC+TGG | - | chr8.4:11138186-11138205 | None:intergenic | 45.0% | |
| AATCACCGTACCTTTGGCAT+TGG | + | chr8.4:11137919-11137938 | MS.gene061332:intron | 45.0% | |
| ACTATTCCAGCCTATGGCTA+TGG | - | chr8.4:11138788-11138807 | None:intergenic | 45.0% | |
| ATCACCGTACCTTTGGCATT+GGG | + | chr8.4:11137920-11137939 | MS.gene061332:intron | 45.0% | |
| ATCAGACAAGTTCCTTCCTC+AGG | + | chr8.4:11138530-11138549 | MS.gene061332:CDS | 45.0% | |
| CCGACTGTGACAACATCAAT+TGG | - | chr8.4:11140894-11140913 | None:intergenic | 45.0% | |
| CTAGCCTACAATACCACAGA+AGG | - | chr8.4:11139148-11139167 | None:intergenic | 45.0% | |
| CTCACCGTGTACTGAATATC+AGG | - | chr8.4:11138085-11138104 | None:intergenic | 45.0% | |
| GATGCTAGGAGAAAAGCTAC+TGG | + | chr8.4:11139643-11139662 | MS.gene061332:CDS | 45.0% | |
| GGCAGCAAGATAAATGGAGT+GGG | + | chr8.4:11139886-11139905 | MS.gene061332:CDS | 45.0% | |
| GGGTCAGTATGACTAATCGA+AGG | - | chr8.4:11139773-11139792 | None:intergenic | 45.0% | |
| GTTTCGTCTCTACCTGTCTT+GGG | - | chr8.4:11140857-11140876 | None:intergenic | 45.0% | |
| TCAACTCCAATCATAGCACC+TGG | - | chr8.4:11138280-11138299 | None:intergenic | 45.0% | |
| TCAGACAAGTTCCTTCCTCA+GGG | + | chr8.4:11138531-11138550 | MS.gene061332:CDS | 45.0% | |
| TGAGCATGTCAAATCAGTGC+TGG | + | chr8.4:11138699-11138718 | MS.gene061332:intron | 45.0% | |
| TGGCAGCAAGATAAATGGAG+TGG | + | chr8.4:11139885-11139904 | MS.gene061332:CDS | 45.0% | |
| TGGCTAGGATTTGAATCACC+TGG | + | chr8.4:11138019-11138038 | MS.gene061332:intron | 45.0% | |
| TTCATCCACAGATGTAGTGC+TGG | - | chr8.4:11140763-11140782 | None:intergenic | 45.0% | |
| TTTCGTCTCTACCTGTCTTG+GGG | - | chr8.4:11140856-11140875 | None:intergenic | 45.0% | |
| ! | AATGCCAGCGGTCAATTTTG+TGG | + | chr8.4:11139813-11139832 | MS.gene061332:CDS | 45.0% |
| ! | ATCTCCCGACTTTGCTGTAT+AGG | - | chr8.4:11139437-11139456 | None:intergenic | 45.0% |
| ! | GGTGCTATGATTGGAGTTGA+TGG | + | chr8.4:11138280-11138299 | MS.gene061332:CDS | 45.0% |
| ! | TGTCGGTTATAAATGCTCCC+AGG | - | chr8.4:11140081-11140100 | None:intergenic | 45.0% |
| ! | TTTGGCATTGGGGTTGAATC+CGG | + | chr8.4:11137931-11137950 | MS.gene061332:intron | 45.0% |
| !! | AATGTGGGTTCGTCGACTTT+AGG | + | chr8.4:11140355-11140374 | MS.gene061332:intron | 45.0% |
| !! | GGAGTTGATGGTTCATTTGG+AGG | + | chr8.4:11138292-11138311 | MS.gene061332:CDS | 45.0% |
| !! | GGGGTTTTGATAATTGGGGA+GGG | - | chr8.4:11138335-11138354 | None:intergenic | 45.0% |
| !! | TGGGGTTTTGATAATTGGGG+AGG | - | chr8.4:11138336-11138355 | None:intergenic | 45.0% |
| !!! | CAGCTTCTGCTGCTTTTACT+AGG | + | chr8.4:11138485-11138504 | MS.gene061332:CDS | 45.0% |
| AAACCGACAGAAGGTCATGC+AGG | + | chr8.4:11140548-11140567 | MS.gene061332:CDS | 50.0% | |
| AGATCTCTACAGGCAGGCAA+AGG | + | chr8.4:11140990-11141009 | MS.gene061332:CDS | 50.0% | |
| AGTCACCATTACCCCAAGAC+AGG | + | chr8.4:11140842-11140861 | MS.gene061332:CDS | 50.0% | |
| ATCGGGGCCCTAGAATTAGT+AGG | + | chr8.4:11139386-11139405 | MS.gene061332:CDS | 50.0% | |
| CAACCCCAATGCCAAAGGTA+CGG | - | chr8.4:11137927-11137946 | None:intergenic | 50.0% | |
| CTCTACCTGTCTTGGGGTAA+TGG | - | chr8.4:11140850-11140869 | None:intergenic | 50.0% | |
| CTGGGAGCAACATGAACCTT+TGG | - | chr8.4:11139325-11139344 | None:intergenic | 50.0% | |
| GACAAACTGCGTTTGGCAGA+TGG | - | chr8.4:11138742-11138761 | None:intergenic | 50.0% | |
| GATCCAAGATCTCTACAGGC+AGG | + | chr8.4:11140984-11141003 | MS.gene061332:CDS | 50.0% | |
| GGATTCAACCCCAATGCCAA+AGG | - | chr8.4:11137932-11137951 | None:intergenic | 50.0% | |
| GGTTTCGTCTCTACCTGTCT+TGG | - | chr8.4:11140858-11140877 | None:intergenic | 50.0% | |
| GTGTCTCGGCTGTTAGTTAC+AGG | - | chr8.4:11139996-11140015 | None:intergenic | 50.0% | |
| GTGTGGTCATCAACACCTCA+TGG | + | chr8.4:11139592-11139611 | MS.gene061332:CDS | 50.0% | |
| TAACAGCCGAGACACACAAG+AGG | + | chr8.4:11140001-11140020 | MS.gene061332:CDS | 50.0% | |
| TACCCTGCTCCCACCAATTA+CGG | + | chr8.4:11137868-11137887 | MS.gene061332:CDS | 50.0% | |
| TCACCGTACCTTTGGCATTG+GGG | + | chr8.4:11137921-11137940 | MS.gene061332:intron | 50.0% | |
| TGAATCACCTGGTGAATGGG+AGG | + | chr8.4:11138030-11138049 | MS.gene061332:CDS | 50.0% | |
| TGCTTCATCACCTTCCCATC+AGG | + | chr8.4:11138636-11138655 | MS.gene061332:CDS | 50.0% | |
| TGTCACCAGCACTACATCTG+TGG | + | chr8.4:11140755-11140774 | MS.gene061332:CDS | 50.0% | |
| TGTGGAGTTGCTGAGATGGT+TGG | + | chr8.4:11139831-11139850 | MS.gene061332:CDS | 50.0% | |
| TTGCCTGCCTGTAGAGATCT+TGG | - | chr8.4:11140990-11141009 | None:intergenic | 50.0% | |
| TTGTCAAAAGAGGCCTGTCG+TGG | + | chr8.4:11138757-11138776 | MS.gene061332:intron | 50.0% | |
| ! | CTTTAGGAGGGTCTTCAGCT+TGG | + | chr8.4:11140371-11140390 | MS.gene061332:intron | 50.0% |
| !! | ATGTCAAATCAGTGCTGGCG+TGG | + | chr8.4:11138704-11138723 | MS.gene061332:intron | 50.0% |
| !! | TGGGTTCGTCGACTTTAGGA+GGG | + | chr8.4:11140359-11140378 | MS.gene061332:intron | 50.0% |
| AACCCGTAATTGGTGGGAGC+AGG | - | chr8.4:11137874-11137893 | None:intergenic | 55.0% | |
| ACCCGTAATTGGTGGGAGCA+GGG | - | chr8.4:11137873-11137892 | None:intergenic | 55.0% | |
| ACCCTGCTCCCACCAATTAC+GGG | + | chr8.4:11137869-11137888 | MS.gene061332:CDS | 55.0% | |
| CAAGACACATACGGGCAGAG+AGG | - | chr8.4:11138116-11138135 | None:intergenic | 55.0% | |
| CCTCCTGCATGACCTTCTGT+CGG | - | chr8.4:11140554-11140573 | None:intergenic | 55.0% | |
| GAGCTGCCCCGTTGAGTAAT+GGG | + | chr8.4:11139245-11139264 | MS.gene061332:CDS | 55.0% | |
| GGGGCCAAGAGCTAATGCTT+TGG | + | chr8.4:11138561-11138580 | MS.gene061332:CDS | 55.0% | |
| GTGGGAGCTTCCCTGTAAAG+TGG | + | chr8.4:11139904-11139923 | MS.gene061332:CDS | 55.0% | |
| ! | AGCATTAGCTCTTGGCCCCT+CGG | - | chr8.4:11138560-11138579 | None:intergenic | 55.0% |
| !! | GTGGGTTCGTCGACTTTAGG+AGG | + | chr8.4:11140358-11140377 | MS.gene061332:intron | 55.0% |
| CCGACAGAAGGTCATGCAGG+AGG | + | chr8.4:11140551-11140570 | MS.gene061332:CDS | 60.0% | |
| CGTGGCAGTGCCATAGCCAT+AGG | + | chr8.4:11138775-11138794 | MS.gene061332:intron | 60.0% | |
| GCAGTGCCATAGCCATAGGC+TGG | + | chr8.4:11138779-11138798 | MS.gene061332:intron | 60.0% | |
| GGAGCTGCCCCGTTGAGTAA+TGG | + | chr8.4:11139244-11139263 | MS.gene061332:CDS | 60.0% | |
| TGGTGGTCCTCCCATTCACC+AGG | - | chr8.4:11138040-11138059 | None:intergenic | 60.0% | |
| TTTCGAGGTGGCGCCAACAC+TGG | - | chr8.4:11140615-11140634 | None:intergenic | 60.0% | |
| ! | GCATTAGCTCTTGGCCCCTC+GGG | - | chr8.4:11138559-11138578 | None:intergenic | 60.0% |
| ! | TCCTTCCTCAGGGTACCCGA+GGG | + | chr8.4:11138541-11138560 | MS.gene061332:CDS | 60.0% |
| ! | TTCCTTCCTCAGGGTACCCG+AGG | + | chr8.4:11138540-11138559 | MS.gene061332:CDS | 60.0% |
| GGCTATGGCACTGCCACGAC+AGG | - | chr8.4:11138773-11138792 | None:intergenic | 65.0% | |
| ! | CCTTCCTCAGGGTACCCGAG+GGG | + | chr8.4:11138542-11138561 | MS.gene061332:CDS | 65.0% |
| CCCCTCGGGTACCCTGAGGA+AGG | - | chr8.4:11138545-11138564 | None:intergenic | 70.0% | |
| TTGGCCCCTCGGGTACCCTG+AGG | - | chr8.4:11138549-11138568 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 11137818 | 11141034 | 11137818 | ID=MS.gene061332 |
| chr8.4 | mRNA | 11137818 | 11141034 | 11137818 | ID=MS.gene061332.t1;Parent=MS.gene061332 |
| chr8.4 | exon | 11137818 | 11137904 | 11137818 | ID=MS.gene061332.t1.exon1;Parent=MS.gene061332.t1 |
| chr8.4 | CDS | 11137818 | 11137904 | 11137818 | ID=cds.MS.gene061332.t1;Parent=MS.gene061332.t1 |
| chr8.4 | exon | 11138026 | 11138099 | 11138026 | ID=MS.gene061332.t1.exon2;Parent=MS.gene061332.t1 |
| chr8.4 | CDS | 11138026 | 11138099 | 11138026 | ID=cds.MS.gene061332.t1;Parent=MS.gene061332.t1 |
| chr8.4 | exon | 11138187 | 11138657 | 11138187 | ID=MS.gene061332.t1.exon3;Parent=MS.gene061332.t1 |
| chr8.4 | CDS | 11138187 | 11138657 | 11138187 | ID=cds.MS.gene061332.t1;Parent=MS.gene061332.t1 |
| chr8.4 | exon | 11139163 | 11139702 | 11139163 | ID=MS.gene061332.t1.exon4;Parent=MS.gene061332.t1 |
| chr8.4 | CDS | 11139163 | 11139702 | 11139163 | ID=cds.MS.gene061332.t1;Parent=MS.gene061332.t1 |
| chr8.4 | exon | 11139810 | 11140022 | 11139810 | ID=MS.gene061332.t1.exon5;Parent=MS.gene061332.t1 |
| chr8.4 | CDS | 11139810 | 11140022 | 11139810 | ID=cds.MS.gene061332.t1;Parent=MS.gene061332.t1 |
| chr8.4 | exon | 11140459 | 11141034 | 11140459 | ID=MS.gene061332.t1.exon6;Parent=MS.gene061332.t1 |
| chr8.4 | CDS | 11140459 | 11141034 | 11140459 | ID=cds.MS.gene061332.t1;Parent=MS.gene061332.t1 |
| Gene Sequence |
| Protein sequence |
