Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061733.t1 | XP_013457918.1 | 96.3 | 219 | 8 | 0 | 1 | 219 | 1 | 219 | 1.60E-95 | 359 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061733.t1 | Q8LBA0 | 56.0 | 150 | 61 | 2 | 71 | 219 | 76 | 221 | 9.1e-44 | 178.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061733.t1 | A0A072UQ59 | 96.3 | 219 | 8 | 0 | 1 | 219 | 1 | 219 | 1.1e-95 | 359.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050508 | MS.gene061733 | 0.800096 | 1.69E-48 | -1.69E-46 |
MS.gene059710 | MS.gene061733 | 0.804322 | 2.28E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061733.t1 | MTR_4g108830 | 95.890 | 219 | 9 | 0 | 1 | 219 | 1 | 219 | 1.22e-148 | 412 |
MS.gene061733.t1 | MTR_4g108830 | 83.105 | 219 | 9 | 1 | 1 | 219 | 1 | 191 | 4.08e-121 | 342 |
MS.gene061733.t1 | MTR_5g022920 | 40.404 | 198 | 111 | 2 | 25 | 219 | 41 | 234 | 1.18e-51 | 167 |
MS.gene061733.t1 | MTR_8g074900 | 38.095 | 210 | 123 | 3 | 8 | 217 | 21 | 223 | 2.59e-46 | 153 |
MS.gene061733.t1 | MTR_5g092790 | 35.437 | 206 | 114 | 6 | 17 | 219 | 41 | 230 | 6.88e-27 | 103 |
MS.gene061733.t1 | MTR_5g092750 | 35.533 | 197 | 112 | 6 | 27 | 219 | 45 | 230 | 5.29e-26 | 101 |
MS.gene061733.t1 | MTR_4g108970 | 73.913 | 46 | 12 | 0 | 126 | 171 | 35 | 80 | 1.41e-17 | 74.7 |
MS.gene061733.t1 | MTR_6g007680 | 46.575 | 73 | 38 | 1 | 148 | 219 | 39 | 111 | 6.78e-16 | 72.4 |
MS.gene061733.t1 | MTR_3g094000 | 33.333 | 93 | 59 | 1 | 130 | 219 | 72 | 164 | 3.41e-15 | 71.2 |
MS.gene061733.t1 | MTR_5g082940 | 45.833 | 72 | 36 | 1 | 148 | 216 | 74 | 145 | 5.98e-15 | 70.1 |
MS.gene061733.t1 | MTR_8g093010 | 36.735 | 98 | 52 | 2 | 122 | 217 | 88 | 177 | 1.48e-14 | 70.1 |
MS.gene061733.t1 | MTR_8g092960 | 43.056 | 72 | 39 | 1 | 148 | 217 | 102 | 173 | 4.45e-14 | 68.9 |
MS.gene061733.t1 | MTR_8g092840 | 43.056 | 72 | 39 | 1 | 148 | 217 | 112 | 183 | 4.94e-14 | 68.9 |
MS.gene061733.t1 | MTR_8g099515 | 39.726 | 73 | 41 | 1 | 149 | 218 | 309 | 381 | 7.26e-14 | 70.1 |
MS.gene061733.t1 | MTR_7g076250 | 55.319 | 47 | 21 | 0 | 170 | 216 | 86 | 132 | 7.35e-14 | 67.8 |
MS.gene061733.t1 | MTR_3g078470 | 32.456 | 114 | 66 | 3 | 106 | 216 | 41 | 146 | 1.10e-13 | 67.8 |
MS.gene061733.t1 | MTR_3g081030 | 38.961 | 77 | 45 | 1 | 142 | 216 | 85 | 161 | 1.32e-13 | 67.4 |
MS.gene061733.t1 | MTR_5g071930 | 40.000 | 80 | 44 | 2 | 139 | 216 | 54 | 131 | 1.57e-13 | 67.0 |
MS.gene061733.t1 | MTR_3g114500 | 46.667 | 75 | 38 | 2 | 145 | 219 | 44 | 116 | 2.13e-13 | 65.1 |
MS.gene061733.t1 | MTR_7g116200 | 36.620 | 71 | 45 | 0 | 146 | 216 | 65 | 135 | 2.18e-13 | 66.2 |
MS.gene061733.t1 | MTR_8g092930 | 41.667 | 72 | 40 | 1 | 148 | 217 | 111 | 182 | 3.04e-13 | 66.6 |
MS.gene061733.t1 | MTR_8g092985 | 41.667 | 72 | 40 | 1 | 148 | 217 | 110 | 181 | 3.17e-13 | 66.6 |
MS.gene061733.t1 | MTR_6g007670 | 37.634 | 93 | 56 | 1 | 129 | 219 | 125 | 217 | 5.55e-13 | 66.2 |
MS.gene061733.t1 | MTR_6g007670 | 41.667 | 72 | 42 | 0 | 148 | 219 | 7 | 78 | 2.08e-12 | 64.7 |
MS.gene061733.t1 | MTR_7g073200 | 41.892 | 74 | 38 | 2 | 149 | 219 | 81 | 152 | 5.57e-13 | 65.1 |
MS.gene061733.t1 | MTR_8g073120 | 41.333 | 75 | 41 | 1 | 145 | 216 | 66 | 140 | 6.44e-13 | 65.5 |
MS.gene061733.t1 | MTR_6g087150 | 43.836 | 73 | 38 | 2 | 149 | 219 | 93 | 164 | 7.71e-13 | 67.0 |
MS.gene061733.t1 | MTR_2g096350 | 44.118 | 68 | 35 | 1 | 155 | 219 | 113 | 180 | 7.97e-13 | 65.5 |
MS.gene061733.t1 | MTR_5g024730 | 42.466 | 73 | 39 | 1 | 148 | 217 | 76 | 148 | 8.01e-13 | 65.5 |
MS.gene061733.t1 | MTR_8g092990 | 50.000 | 52 | 26 | 0 | 166 | 217 | 133 | 184 | 9.53e-13 | 65.5 |
MS.gene061733.t1 | MTR_8g092970 | 50.000 | 52 | 26 | 0 | 166 | 217 | 123 | 174 | 9.58e-13 | 65.1 |
MS.gene061733.t1 | MTR_7g079280 | 38.356 | 73 | 42 | 1 | 149 | 218 | 80 | 152 | 1.25e-12 | 64.3 |
MS.gene061733.t1 | MTR_8g028465 | 40.000 | 70 | 41 | 1 | 149 | 218 | 90 | 158 | 1.49e-12 | 64.3 |
MS.gene061733.t1 | MTR_3g025510 | 41.333 | 75 | 43 | 1 | 145 | 219 | 76 | 149 | 1.55e-12 | 63.5 |
MS.gene061733.t1 | MTR_2g436100 | 39.726 | 73 | 43 | 1 | 148 | 219 | 92 | 164 | 1.93e-12 | 65.5 |
MS.gene061733.t1 | MTR_1g026070 | 45.070 | 71 | 37 | 2 | 149 | 219 | 48 | 116 | 2.03e-12 | 62.4 |
MS.gene061733.t1 | MTR_5g064980 | 38.667 | 75 | 42 | 3 | 149 | 219 | 108 | 182 | 2.71e-12 | 65.5 |
MS.gene061733.t1 | MTR_3g071300 | 42.105 | 76 | 39 | 2 | 146 | 216 | 73 | 148 | 3.01e-12 | 63.2 |
MS.gene061733.t1 | MTR_3g095560 | 40.845 | 71 | 40 | 1 | 149 | 217 | 109 | 179 | 3.51e-12 | 63.9 |
MS.gene061733.t1 | MTR_4g120270 | 37.662 | 77 | 47 | 1 | 143 | 219 | 74 | 149 | 3.68e-12 | 64.3 |
MS.gene061733.t1 | MTR_3g078450 | 31.250 | 112 | 67 | 4 | 115 | 216 | 35 | 146 | 4.10e-12 | 63.5 |
MS.gene061733.t1 | MTR_1g070425 | 38.158 | 76 | 43 | 2 | 146 | 217 | 65 | 140 | 4.67e-12 | 62.8 |
MS.gene061733.t1 | MTR_7g116180 | 38.158 | 76 | 43 | 2 | 146 | 217 | 64 | 139 | 4.93e-12 | 62.4 |
MS.gene061733.t1 | MTR_3g464780 | 36.364 | 77 | 44 | 1 | 148 | 219 | 101 | 177 | 5.21e-12 | 63.9 |
MS.gene061733.t1 | MTR_7g079290 | 51.064 | 47 | 23 | 0 | 171 | 217 | 152 | 198 | 5.48e-12 | 63.2 |
MS.gene061733.t1 | MTR_2g055790 | 40.278 | 72 | 41 | 1 | 148 | 219 | 76 | 145 | 6.48e-12 | 62.4 |
MS.gene061733.t1 | MTR_7g116210 | 35.211 | 71 | 46 | 0 | 146 | 216 | 7 | 77 | 6.64e-12 | 60.8 |
MS.gene061733.t1 | MTR_4g063070 | 40.845 | 71 | 39 | 1 | 149 | 216 | 308 | 378 | 6.87e-12 | 64.3 |
MS.gene061733.t1 | MTR_1g043410 | 39.241 | 79 | 38 | 3 | 148 | 219 | 93 | 168 | 6.90e-12 | 63.9 |
MS.gene061733.t1 | MTR_1g082550 | 42.373 | 59 | 30 | 1 | 161 | 219 | 118 | 172 | 7.32e-12 | 63.9 |
MS.gene061733.t1 | MTR_5g088720 | 35.714 | 70 | 44 | 1 | 147 | 216 | 219 | 287 | 7.64e-12 | 63.9 |
MS.gene061733.t1 | MTR_7g116220 | 38.356 | 73 | 41 | 2 | 148 | 216 | 69 | 141 | 8.41e-12 | 62.0 |
MS.gene061733.t1 | MTR_5g088720 | 35.714 | 70 | 44 | 1 | 147 | 216 | 178 | 246 | 8.97e-12 | 63.5 |
MS.gene061733.t1 | MTR_5g088720 | 35.714 | 70 | 44 | 1 | 147 | 216 | 173 | 241 | 9.48e-12 | 63.5 |
MS.gene061733.t1 | MTR_7g113800 | 47.826 | 46 | 24 | 0 | 174 | 219 | 120 | 165 | 1.26e-11 | 63.5 |
MS.gene061733.t1 | MTR_2g090905 | 50.000 | 46 | 23 | 0 | 174 | 219 | 71 | 116 | 1.29e-11 | 60.1 |
MS.gene061733.t1 | MTR_3g099650 | 39.474 | 76 | 42 | 2 | 148 | 219 | 106 | 181 | 1.44e-11 | 63.2 |
MS.gene061733.t1 | MTR_4g030070 | 35.294 | 68 | 44 | 0 | 149 | 216 | 85 | 152 | 1.50e-11 | 62.0 |
MS.gene061733.t1 | MTR_5g026730 | 41.791 | 67 | 33 | 1 | 156 | 216 | 70 | 136 | 1.51e-11 | 61.2 |
MS.gene061733.t1 | MTR_7g117540 | 38.710 | 62 | 38 | 0 | 155 | 216 | 82 | 143 | 1.53e-11 | 62.8 |
MS.gene061733.t1 | MTR_3g116000 | 38.571 | 70 | 43 | 0 | 148 | 217 | 78 | 147 | 1.55e-11 | 61.6 |
MS.gene061733.t1 | MTR_1g492830 | 38.028 | 71 | 42 | 1 | 148 | 216 | 60 | 130 | 1.61e-11 | 62.0 |
MS.gene061733.t1 | MTR_3g110190 | 34.783 | 92 | 52 | 3 | 127 | 216 | 49 | 134 | 1.73e-11 | 62.8 |
MS.gene061733.t1 | MTR_4g129335 | 42.424 | 66 | 37 | 1 | 155 | 219 | 82 | 147 | 1.90e-11 | 60.8 |
MS.gene061733.t1 | MTR_4g129370 | 42.424 | 66 | 37 | 1 | 155 | 219 | 82 | 147 | 1.90e-11 | 60.8 |
MS.gene061733.t1 | MTR_1g070140 | 37.333 | 75 | 43 | 2 | 148 | 219 | 102 | 175 | 1.91e-11 | 62.8 |
MS.gene061733.t1 | MTR_8g066780 | 50.000 | 48 | 24 | 0 | 172 | 219 | 140 | 187 | 1.95e-11 | 62.8 |
MS.gene061733.t1 | MTR_1g051105 | 36.986 | 73 | 45 | 1 | 147 | 219 | 132 | 203 | 2.13e-11 | 62.0 |
MS.gene061733.t1 | MTR_5g026720 | 40.000 | 70 | 36 | 1 | 155 | 218 | 68 | 137 | 2.59e-11 | 60.1 |
MS.gene061733.t1 | MTR_3g078120 | 51.163 | 43 | 21 | 0 | 174 | 216 | 85 | 127 | 2.65e-11 | 60.1 |
MS.gene061733.t1 | MTR_8g099495 | 29.167 | 96 | 65 | 1 | 125 | 217 | 295 | 390 | 3.04e-11 | 62.4 |
MS.gene061733.t1 | MTR_1g047180 | 39.437 | 71 | 40 | 2 | 149 | 219 | 660 | 727 | 3.55e-11 | 62.4 |
MS.gene061733.t1 | MTR_8g071815 | 48.889 | 45 | 23 | 0 | 174 | 218 | 90 | 134 | 3.58e-11 | 60.1 |
MS.gene061733.t1 | MTR_3g091200 | 32.184 | 87 | 55 | 2 | 133 | 216 | 288 | 373 | 3.72e-11 | 62.0 |
MS.gene061733.t1 | MTR_8g023400 | 42.857 | 70 | 38 | 2 | 149 | 217 | 92 | 160 | 3.78e-11 | 62.0 |
MS.gene061733.t1 | MTR_2g041200 | 48.077 | 52 | 27 | 0 | 168 | 219 | 103 | 154 | 3.97e-11 | 60.1 |
MS.gene061733.t1 | MTR_4g129420 | 32.632 | 95 | 53 | 2 | 136 | 219 | 95 | 189 | 4.19e-11 | 62.0 |
MS.gene061733.t1 | MTR_4g056590 | 39.130 | 69 | 40 | 1 | 148 | 216 | 99 | 165 | 4.32e-11 | 60.5 |
MS.gene061733.t1 | MTR_4g094725 | 50.000 | 44 | 22 | 0 | 174 | 217 | 106 | 149 | 4.39e-11 | 59.3 |
MS.gene061733.t1 | MTR_6g055030 | 36.842 | 76 | 44 | 2 | 148 | 219 | 96 | 171 | 5.07e-11 | 61.2 |
MS.gene061733.t1 | MTR_2g090950 | 50.000 | 46 | 23 | 0 | 174 | 219 | 123 | 168 | 5.14e-11 | 60.8 |
MS.gene061733.t1 | MTR_3g100400 | 52.174 | 46 | 22 | 0 | 174 | 219 | 156 | 201 | 5.32e-11 | 61.6 |
MS.gene061733.t1 | MTR_2g009310 | 48.936 | 47 | 24 | 0 | 170 | 216 | 157 | 203 | 5.70e-11 | 61.6 |
MS.gene061733.t1 | MTR_5g066250 | 52.174 | 46 | 22 | 0 | 174 | 219 | 160 | 205 | 6.31e-11 | 61.6 |
MS.gene061733.t1 | MTR_3g091620 | 28.571 | 147 | 86 | 4 | 89 | 216 | 23 | 169 | 6.32e-11 | 61.2 |
MS.gene061733.t1 | MTR_8g032690 | 51.163 | 43 | 21 | 0 | 174 | 216 | 19 | 61 | 7.69e-11 | 57.8 |
MS.gene061733.t1 | MTR_2g035800 | 34.722 | 72 | 46 | 1 | 149 | 219 | 76 | 147 | 8.99e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061733.t1 | AT1G74410 | 56.373 | 204 | 84 | 2 | 17 | 219 | 22 | 221 | 1.21e-72 | 220 |
MS.gene061733.t1 | AT5G66070 | 41.063 | 207 | 116 | 4 | 14 | 219 | 20 | 221 | 3.35e-49 | 160 |
MS.gene061733.t1 | AT5G66070 | 41.063 | 207 | 116 | 4 | 14 | 219 | 20 | 221 | 3.35e-49 | 160 |
MS.gene061733.t1 | AT5G66070 | 37.719 | 228 | 118 | 4 | 14 | 219 | 20 | 245 | 8.64e-47 | 155 |
MS.gene061733.t1 | AT2G17730 | 38.462 | 208 | 120 | 4 | 16 | 219 | 38 | 241 | 1.28e-45 | 152 |
MS.gene061733.t1 | AT4G35840 | 36.667 | 210 | 120 | 3 | 19 | 219 | 31 | 236 | 7.60e-44 | 147 |
MS.gene061733.t1 | AT2G17730 | 38.191 | 199 | 115 | 4 | 16 | 210 | 38 | 232 | 2.06e-40 | 139 |
MS.gene061733.t1 | AT4G35840 | 31.897 | 232 | 116 | 3 | 25 | 219 | 42 | 268 | 4.33e-37 | 130 |
MS.gene061733.t1 | AT3G20395 | 29.825 | 228 | 134 | 5 | 5 | 219 | 2 | 216 | 1.22e-29 | 110 |
MS.gene061733.t1 | AT5G66070 | 36.527 | 167 | 100 | 3 | 14 | 179 | 20 | 181 | 1.07e-26 | 101 |
MS.gene061733.t1 | AT5G66070 | 33.511 | 188 | 101 | 4 | 14 | 179 | 20 | 205 | 2.22e-24 | 96.3 |
MS.gene061733.t1 | AT3G10910 | 40.816 | 98 | 49 | 3 | 125 | 219 | 68 | 159 | 1.55e-16 | 74.7 |
MS.gene061733.t1 | AT5G05280 | 41.667 | 72 | 42 | 0 | 148 | 219 | 87 | 158 | 1.63e-15 | 72.0 |
MS.gene061733.t1 | AT2G27940 | 42.254 | 71 | 41 | 0 | 148 | 218 | 114 | 184 | 3.24e-15 | 72.4 |
MS.gene061733.t1 | AT2G17450 | 44.872 | 78 | 35 | 2 | 148 | 217 | 68 | 145 | 1.93e-14 | 69.3 |
MS.gene061733.t1 | AT5G01880 | 44.444 | 72 | 39 | 1 | 149 | 219 | 79 | 150 | 2.49e-14 | 68.6 |
MS.gene061733.t1 | AT3G16720 | 38.961 | 77 | 47 | 0 | 143 | 219 | 88 | 164 | 6.48e-14 | 69.7 |
MS.gene061733.t1 | AT4G10160 | 39.706 | 68 | 41 | 0 | 149 | 216 | 72 | 139 | 1.65e-13 | 67.4 |
MS.gene061733.t1 | AT5G53110 | 37.363 | 91 | 51 | 2 | 131 | 218 | 287 | 374 | 1.98e-13 | 68.9 |
MS.gene061733.t1 | AT5G42200 | 42.466 | 73 | 41 | 1 | 145 | 216 | 74 | 146 | 2.36e-13 | 65.9 |
MS.gene061733.t1 | AT4G10150 | 38.235 | 68 | 42 | 0 | 149 | 216 | 86 | 153 | 4.53e-13 | 66.6 |
MS.gene061733.t1 | AT4G17905 | 42.857 | 63 | 34 | 1 | 157 | 219 | 166 | 226 | 8.79e-13 | 66.6 |
MS.gene061733.t1 | AT4G17905 | 42.857 | 63 | 34 | 1 | 157 | 219 | 140 | 200 | 8.84e-13 | 66.6 |
MS.gene061733.t1 | AT4G09120 | 37.374 | 99 | 51 | 4 | 125 | 219 | 77 | 168 | 9.78e-13 | 66.6 |
MS.gene061733.t1 | AT2G46160 | 39.241 | 79 | 39 | 1 | 149 | 218 | 104 | 182 | 1.11e-12 | 65.1 |
MS.gene061733.t1 | AT2G46160 | 39.241 | 79 | 39 | 1 | 149 | 218 | 104 | 182 | 1.11e-12 | 65.1 |
MS.gene061733.t1 | AT5G57750 | 37.879 | 66 | 39 | 1 | 155 | 218 | 101 | 166 | 1.13e-12 | 65.1 |
MS.gene061733.t1 | AT1G20823 | 41.667 | 72 | 40 | 1 | 148 | 217 | 83 | 154 | 1.21e-12 | 64.7 |
MS.gene061733.t1 | AT1G76410 | 35.165 | 91 | 57 | 1 | 129 | 217 | 57 | 147 | 1.60e-12 | 63.9 |
MS.gene061733.t1 | AT1G35330 | 42.466 | 73 | 38 | 2 | 148 | 216 | 99 | 171 | 2.83e-12 | 65.1 |
MS.gene061733.t1 | AT2G35910 | 40.580 | 69 | 40 | 1 | 149 | 216 | 121 | 189 | 3.42e-12 | 63.9 |
MS.gene061733.t1 | AT2G42360 | 41.892 | 74 | 41 | 1 | 148 | 219 | 80 | 153 | 3.92e-12 | 63.9 |
MS.gene061733.t1 | AT3G14320 | 52.174 | 46 | 22 | 0 | 174 | 219 | 88 | 133 | 4.81e-12 | 63.2 |
MS.gene061733.t1 | AT4G40070 | 47.059 | 51 | 27 | 0 | 169 | 219 | 119 | 169 | 5.01e-12 | 64.3 |
MS.gene061733.t1 | AT3G18930 | 35.417 | 96 | 49 | 2 | 135 | 219 | 108 | 201 | 5.67e-12 | 64.7 |
MS.gene061733.t1 | AT3G18930 | 35.417 | 96 | 49 | 2 | 135 | 219 | 108 | 201 | 5.67e-12 | 64.7 |
MS.gene061733.t1 | AT3G18930 | 35.417 | 96 | 49 | 2 | 135 | 219 | 108 | 201 | 5.67e-12 | 64.7 |
MS.gene061733.t1 | AT4G09130 | 38.710 | 93 | 50 | 4 | 131 | 219 | 76 | 165 | 5.73e-12 | 64.3 |
MS.gene061733.t1 | AT3G18773 | 38.889 | 72 | 42 | 1 | 148 | 217 | 102 | 173 | 7.10e-12 | 62.8 |
MS.gene061733.t1 | AT2G20030 | 39.726 | 73 | 41 | 2 | 149 | 219 | 98 | 169 | 7.32e-12 | 64.3 |
MS.gene061733.t1 | AT5G10380 | 41.667 | 72 | 41 | 1 | 149 | 219 | 109 | 180 | 8.19e-12 | 63.5 |
MS.gene061733.t1 | AT1G53820 | 50.000 | 46 | 23 | 0 | 174 | 219 | 120 | 165 | 9.05e-12 | 63.5 |
MS.gene061733.t1 | AT1G49220 | 40.541 | 74 | 42 | 1 | 146 | 217 | 105 | 178 | 9.68e-12 | 63.2 |
MS.gene061733.t1 | AT1G72310 | 37.333 | 75 | 47 | 0 | 145 | 219 | 98 | 172 | 1.09e-11 | 63.5 |
MS.gene061733.t1 | AT2G42350 | 42.029 | 69 | 40 | 0 | 148 | 216 | 74 | 142 | 1.36e-11 | 62.0 |
MS.gene061733.t1 | AT3G05200 | 52.174 | 46 | 22 | 0 | 174 | 219 | 128 | 173 | 1.46e-11 | 63.5 |
MS.gene061733.t1 | AT4G30370 | 40.541 | 74 | 39 | 2 | 149 | 219 | 89 | 160 | 1.64e-11 | 61.2 |
MS.gene061733.t1 | AT4G09100 | 34.615 | 78 | 47 | 1 | 146 | 219 | 53 | 130 | 1.79e-11 | 60.1 |
MS.gene061733.t1 | AT4G28890 | 39.726 | 73 | 41 | 2 | 149 | 219 | 97 | 168 | 2.15e-11 | 62.8 |
MS.gene061733.t1 | AT2G18670 | 39.726 | 73 | 42 | 1 | 149 | 219 | 83 | 155 | 2.32e-11 | 60.8 |
MS.gene061733.t1 | AT2G40830 | 32.432 | 74 | 48 | 2 | 147 | 219 | 162 | 234 | 2.45e-11 | 62.4 |
MS.gene061733.t1 | AT2G40830 | 32.432 | 74 | 48 | 2 | 147 | 219 | 162 | 234 | 2.45e-11 | 62.4 |
MS.gene061733.t1 | AT2G40830 | 32.432 | 74 | 48 | 2 | 147 | 219 | 162 | 234 | 2.45e-11 | 62.4 |
MS.gene061733.t1 | AT2G40830 | 32.432 | 74 | 48 | 2 | 147 | 219 | 162 | 234 | 2.45e-11 | 62.4 |
MS.gene061733.t1 | AT1G33480 | 35.294 | 68 | 44 | 0 | 149 | 216 | 75 | 142 | 2.81e-11 | 61.6 |
MS.gene061733.t1 | AT1G35625 | 38.889 | 72 | 40 | 3 | 150 | 218 | 207 | 277 | 3.26e-11 | 62.0 |
MS.gene061733.t1 | AT1G28040 | 30.973 | 113 | 66 | 3 | 106 | 218 | 197 | 297 | 3.91e-11 | 61.6 |
MS.gene061733.t1 | AT2G18650 | 35.616 | 73 | 45 | 1 | 149 | 219 | 99 | 171 | 3.92e-11 | 62.0 |
MS.gene061733.t1 | AT3G48030 | 36.986 | 73 | 44 | 2 | 149 | 219 | 180 | 252 | 4.68e-11 | 61.6 |
MS.gene061733.t1 | AT2G44578 | 42.308 | 52 | 30 | 0 | 168 | 219 | 64 | 115 | 4.69e-11 | 59.3 |
MS.gene061733.t1 | AT4G30400 | 37.143 | 70 | 42 | 1 | 149 | 216 | 107 | 176 | 5.33e-11 | 62.0 |
MS.gene061733.t1 | AT3G48030 | 36.986 | 73 | 44 | 2 | 149 | 219 | 102 | 174 | 5.46e-11 | 61.2 |
MS.gene061733.t1 | AT4G32600 | 33.333 | 114 | 42 | 3 | 134 | 219 | 300 | 407 | 6.75e-11 | 61.6 |
MS.gene061733.t1 | AT4G32600 | 33.333 | 114 | 42 | 3 | 134 | 219 | 300 | 407 | 6.75e-11 | 61.6 |
MS.gene061733.t1 | AT1G53010 | 30.233 | 129 | 68 | 4 | 112 | 219 | 48 | 175 | 6.78e-11 | 59.3 |
MS.gene061733.t1 | AT1G49200 | 38.961 | 77 | 39 | 2 | 146 | 217 | 106 | 179 | 7.45e-11 | 60.1 |
MS.gene061733.t1 | AT5G17600 | 48.837 | 43 | 22 | 0 | 174 | 216 | 142 | 184 | 7.64e-11 | 61.2 |
MS.gene061733.t1 | AT1G35630 | 41.667 | 72 | 38 | 3 | 150 | 218 | 207 | 277 | 8.90e-11 | 60.8 |
MS.gene061733.t1 | AT2G25410 | 46.000 | 50 | 27 | 0 | 169 | 218 | 322 | 371 | 9.27e-11 | 60.8 |
MS.gene061733.t1 | AT5G07040 | 35.616 | 73 | 44 | 1 | 149 | 218 | 66 | 138 | 9.75e-11 | 58.5 |
Find 55 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTTCATTGGGTGCCATTGC+CGG | 0.215022 | 8.1:+16527364 | MS.gene061733:CDS |
ATTGTAGCTGGGGCCCTTAC+AGG | 0.247414 | 8.1:+16527286 | MS.gene061733:intron |
ACGAAACGAAATTCCCTTCT+TGG | 0.308335 | 8.1:+16526597 | MS.gene061733:CDS |
TGGAAGCTTCCCGTGCTTAT+TGG | 0.315076 | 8.1:+16527410 | MS.gene061733:CDS |
AAAGGCGCATAATAGAAATT+TGG | 0.316639 | 8.1:-16526635 | None:intergenic |
TTTCATTGGGTGCCATTGCC+GGG | 0.321224 | 8.1:+16527365 | MS.gene061733:CDS |
TTCACGCGGCGCGTCTTCTA+TGG | 0.328316 | 8.1:+16527450 | MS.gene061733:CDS |
CGAAACGAAATTCCCTTCTT+GGG | 0.382549 | 8.1:+16526598 | MS.gene061733:CDS |
TTTCTGTGCAATATGTTTGC+AGG | 0.383281 | 8.1:+16528647 | MS.gene061733:CDS |
TCCCCGGAGAAAACCACTTT+TGG | 0.384936 | 8.1:-16527341 | None:intergenic |
TACACATTCTGTCTGCAAAT+AGG | 0.395070 | 8.1:-16528923 | None:intergenic |
AATTTACAGGACATTGAAGT+TGG | 0.400528 | 8.1:+16528815 | MS.gene061733:intron |
TTTCTCCGGGGAGTTTCATT+GGG | 0.418806 | 8.1:+16527352 | MS.gene061733:CDS |
ACTTGATATGCGTGGACAAA+TGG | 0.421325 | 8.1:+16528879 | MS.gene061733:CDS |
GAATAAGCTACCACACCATA+TGG | 0.434336 | 8.1:+16528596 | MS.gene061733:CDS |
CACCAGCTATAGCTCCTGTA+AGG | 0.439321 | 8.1:-16527300 | None:intergenic |
TGAATCCCGTGACAATCCTC+TGG | 0.451565 | 8.1:-16528571 | None:intergenic |
TGGCTATCATTCATGGAAAC+TGG | 0.457921 | 8.1:+16526571 | None:intergenic |
TTCCCGTGCTTATTGGTGTA+TGG | 0.470182 | 8.1:+16527417 | MS.gene061733:CDS |
CGCATATCAAGTGAAAAGTA+TGG | 0.479146 | 8.1:-16528868 | None:intergenic |
CATTGCCGGGGCTATACTCT+CGG | 0.488812 | 8.1:+16527378 | MS.gene061733:CDS |
TCATGCCCTTCGAAACCATA+TGG | 0.493143 | 8.1:-16528611 | None:intergenic |
GCAGCTAAGGCTACCAAAAG+TGG | 0.501253 | 8.1:+16527328 | MS.gene061733:CDS |
GCCCTTACAGGAGCTATAGC+TGG | 0.509484 | 8.1:+16527298 | MS.gene061733:CDS |
TATACTCTCGGTGGAGGTGT+TGG | 0.526459 | 8.1:+16527390 | MS.gene061733:CDS |
TTGTAAGCAGTTAAAATAGC+AGG | 0.527550 | 8.1:-16527738 | None:intergenic |
TAGAGGAACTTGTTCGTGGA+AGG | 0.529453 | 8.1:+16527694 | MS.gene061733:CDS |
TGCAGTGAGAGTTCCAGAAA+AGG | 0.530821 | 8.1:-16526653 | None:intergenic |
TTCATAGAGGAACTTGTTCG+TGG | 0.535580 | 8.1:+16527690 | MS.gene061733:CDS |
CTCCACCGAGAGTATAGCCC+CGG | 0.540703 | 8.1:-16527383 | None:intergenic |
GACAAAACGAAAACCCAAGA+AGG | 0.544046 | 8.1:-16526611 | None:intergenic |
TATTGGTGTATGGAACAAAC+TGG | 0.545201 | 8.1:+16527427 | MS.gene061733:CDS |
TTCATTGGGTGCCATTGCCG+GGG | 0.560934 | 8.1:+16527366 | MS.gene061733:CDS |
CGAGAGTATAGCCCCGGCAA+TGG | 0.563534 | 8.1:-16527377 | None:intergenic |
ACCACACCATATGGTTTCGA+AGG | 0.566006 | 8.1:+16528605 | MS.gene061733:CDS |
TTCCATACACCAATAAGCAC+GGG | 0.567244 | 8.1:-16527419 | None:intergenic |
TTCGAAGGGCATGAAGGCAG+AGG | 0.573221 | 8.1:+16528620 | MS.gene061733:CDS |
AATCCAGGCAGATTTCATAG+AGG | 0.579193 | 8.1:+16527677 | MS.gene061733:intron |
GTTCCATACACCAATAAGCA+CGG | 0.597188 | 8.1:-16527420 | None:intergenic |
CGGGGCTATACTCTCGGTGG+AGG | 0.602147 | 8.1:+16527384 | MS.gene061733:CDS |
TATGGTTTCGAAGGGCATGA+AGG | 0.614703 | 8.1:+16528614 | MS.gene061733:CDS |
ACAAAACGAAAACCCAAGAA+GGG | 0.623335 | 8.1:-16526610 | None:intergenic |
TGGCACCCAATGAAACTCCC+CGG | 0.623545 | 8.1:-16527357 | None:intergenic |
CTATCATTCATGGAAACTGG+TGG | 0.623614 | 8.1:+16526574 | None:intergenic |
GTTGGAGTTGCTAATAACGC+TGG | 0.623875 | 8.1:+16528510 | MS.gene061733:CDS |
GAATCCCGTGACAATCCTCT+GGG | 0.625719 | 8.1:-16528570 | None:intergenic |
CCCTTCGAAACCATATGGTG+TGG | 0.632343 | 8.1:-16528606 | None:intergenic |
ATCACCCAGAGGATTGTCAC+GGG | 0.633383 | 8.1:+16528566 | MS.gene061733:CDS |
ACCAGCTATAGCTCCTGTAA+GGG | 0.637027 | 8.1:-16527299 | None:intergenic |
TATCACCCAGAGGATTGTCA+CGG | 0.646030 | 8.1:+16528565 | MS.gene061733:CDS |
CCACACCATATGGTTTCGAA+GGG | 0.649714 | 8.1:+16528606 | MS.gene061733:CDS |
TGCCGGGGCTATACTCTCGG+TGG | 0.658573 | 8.1:+16527381 | MS.gene061733:CDS |
ATGGAACAAACTGGTTCACG+CGG | 0.720989 | 8.1:+16527436 | MS.gene061733:CDS |
CATAGCTTAGTATCACCCAG+AGG | 0.736019 | 8.1:+16528555 | MS.gene061733:CDS |
TGAAAAGTATGGTCGCAACG+AGG | 0.774791 | 8.1:-16528857 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATAAAAAACAAATTATAAA+TGG | - | chr8.1:16528299-16528318 | None:intergenic | 10.0% |
!! | TCAGAATTTAAATATGATAT+AGG | - | chr8.1:16528020-16528039 | None:intergenic | 15.0% |
!!! | ATGAAAGTTTAAGAATTTTT+GGG | + | chr8.1:16526871-16526890 | MS.gene061733:intron | 15.0% |
!!! | TATGAAAGTTTAAGAATTTT+TGG | + | chr8.1:16526870-16526889 | MS.gene061733:intron | 15.0% |
!!! | TTTTTTTGTTTGATTTGAAT+TGG | + | chr8.1:16526791-16526810 | MS.gene061733:intron | 15.0% |
!! | ATACAAATTTAACACATAGT+AGG | + | chr8.1:16528144-16528163 | MS.gene061733:intron | 20.0% |
!! | ATTGAGTTATGTATATACAT+TGG | + | chr8.1:16528210-16528229 | MS.gene061733:intron | 20.0% |
!! | CATTGAGAAATATAATTTAC+AGG | + | chr8.1:16528802-16528821 | MS.gene061733:intron | 20.0% |
!! | TACTATGTGTTAAATTTGTA+TGG | - | chr8.1:16528145-16528164 | None:intergenic | 20.0% |
!! | TCAAATAAACTAATTCAAAC+AGG | + | chr8.1:16527198-16527217 | MS.gene061733:intron | 20.0% |
!!! | AAATTCTGAAACTAAAAAAG+AGG | + | chr8.1:16528031-16528050 | MS.gene061733:intron | 20.0% |
!!! | AATAATTTGTTTATCCAAAC+AGG | - | chr8.1:16526938-16526957 | None:intergenic | 20.0% |
!!! | ATAATTTGTTTATCCAAACA+GGG | - | chr8.1:16526937-16526956 | None:intergenic | 20.0% |
!!! | ATTGGTTTAAAATTATGCAT+CGG | - | chr8.1:16527644-16527663 | None:intergenic | 20.0% |
!!! | TGAAAGTTTAAGAATTTTTG+GGG | + | chr8.1:16526872-16526891 | MS.gene061733:intron | 20.0% |
! | AATCTTTAAATGACCTACAT+TGG | - | chr8.1:16528383-16528402 | None:intergenic | 25.0% |
! | AGCTTGAAATGCATATATAT+AGG | + | chr8.1:16527537-16527556 | MS.gene061733:intron | 25.0% |
! | ATAGGGAAAATGAAAAATTG+TGG | - | chr8.1:16528739-16528758 | None:intergenic | 25.0% |
! | ATATCATCCAAATCTCATAT+AGG | - | chr8.1:16528757-16528776 | None:intergenic | 25.0% |
! | ATCTTTAAATGACCTACATT+GGG | - | chr8.1:16528382-16528401 | None:intergenic | 25.0% |
! | ATTCTGTAACATTTAAATCC+AGG | + | chr8.1:16527662-16527681 | MS.gene061733:intron | 25.0% |
! | CGTAATTAAAACAACATAGA+TGG | - | chr8.1:16526713-16526732 | None:intergenic | 25.0% |
! | GGATTTAAATGTTACAGAAT+TGG | - | chr8.1:16527662-16527681 | None:intergenic | 25.0% |
! | GTTTATCATATAAGCACTTA+CGG | + | chr8.1:16526979-16526998 | MS.gene061733:intron | 25.0% |
! | GTTTATTTGAGCTTATCTAT+TGG | - | chr8.1:16527188-16527207 | None:intergenic | 25.0% |
! | TATCATCCAAATCTCATATA+GGG | - | chr8.1:16528756-16528775 | None:intergenic | 25.0% |
! | TTGCACAAATCAATTTATTC+TGG | + | chr8.1:16526759-16526778 | MS.gene061733:intron | 25.0% |
! | TTTATCATATAAGCACTTAC+GGG | + | chr8.1:16526980-16526999 | MS.gene061733:intron | 25.0% |
! | TTTCAGGATTTGTGATTTAA+TGG | + | chr8.1:16528680-16528699 | MS.gene061733:intron | 25.0% |
!! | AGTCAATAGCAATTCTTTTA+GGG | + | chr8.1:16526911-16526930 | MS.gene061733:intron | 25.0% |
!! | TAAAAGAATTGCTATTGACT+AGG | - | chr8.1:16526911-16526930 | None:intergenic | 25.0% |
!! | TAGTCAATAGCAATTCTTTT+AGG | + | chr8.1:16526910-16526929 | MS.gene061733:intron | 25.0% |
!!! | CTTTTAAAAGGCAAAAATTG+GGG | - | chr8.1:16527795-16527814 | None:intergenic | 25.0% |
!!! | GCTTTTAAAAGGCAAAAATT+GGG | - | chr8.1:16527796-16527815 | None:intergenic | 25.0% |
!!! | TAGTTTTATGAGCATCTTTT+GGG | + | chr8.1:16527886-16527905 | MS.gene061733:intron | 25.0% |
!!! | TGCTTTTAAAAGGCAAAAAT+TGG | - | chr8.1:16527797-16527816 | None:intergenic | 25.0% |
!!! | TTTTAAAAGGCAAAAATTGG+GGG | - | chr8.1:16527794-16527813 | None:intergenic | 25.0% |
AAAACAACATAGATGGTACA+AGG | - | chr8.1:16526706-16526725 | None:intergenic | 30.0% | |
AAACTTATGAAAACAGCTTC+CGG | - | chr8.1:16527128-16527147 | None:intergenic | 30.0% | |
AATTACGAAGCTTAAACATG+AGG | + | chr8.1:16526726-16526745 | MS.gene061733:intron | 30.0% | |
AATTTACAGGACATTGAAGT+TGG | + | chr8.1:16528815-16528834 | MS.gene061733:intron | 30.0% | |
AGGATATTAGAGATTACCAA+AGG | - | chr8.1:16526686-16526705 | None:intergenic | 30.0% | |
ATTACGAAGCTTAAACATGA+GGG | + | chr8.1:16526727-16526746 | MS.gene061733:intron | 30.0% | |
ATTGGTTGTAGTGAAATTCA+TGG | + | chr8.1:16526809-16526828 | MS.gene061733:intron | 30.0% | |
TAAGATGCATCTTAAAAACC+AGG | - | chr8.1:16527595-16527614 | None:intergenic | 30.0% | |
TCTTTAAATGACCTACATTG+GGG | - | chr8.1:16528381-16528400 | None:intergenic | 30.0% | |
TTAAAATTATGCATCGGAGA+TGG | - | chr8.1:16527638-16527657 | None:intergenic | 30.0% | |
TTGTAAGCAGTTAAAATAGC+AGG | - | chr8.1:16527741-16527760 | None:intergenic | 30.0% | |
TTGTAGTGAAATTCATGGTT+TGG | + | chr8.1:16526814-16526833 | MS.gene061733:intron | 30.0% | |
TTGTCCACATACAAAAATCA+AGG | - | chr8.1:16527509-16527528 | None:intergenic | 30.0% | |
! | AAAGGCGCATAATAGAAATT+TGG | - | chr8.1:16526638-16526657 | None:intergenic | 30.0% |
! | ACGGAAAATTTGCATTTTTC+AGG | - | chr8.1:16527853-16527872 | None:intergenic | 30.0% |
! | CATTTTCCCTATATGAGATT+TGG | + | chr8.1:16528747-16528766 | MS.gene061733:intron | 30.0% |
! | GAGGAGAAAAAAACATTTTC+AGG | - | chr8.1:16527950-16527969 | None:intergenic | 30.0% |
! | TTCACCTTGATTTTTGTATG+TGG | + | chr8.1:16527502-16527521 | MS.gene061733:intron | 30.0% |
!! | ACAAAGCTACTGCTTTTAAA+AGG | - | chr8.1:16527807-16527826 | None:intergenic | 30.0% |
!! | GTTATTTCTATAAGCTCTTC+AGG | - | chr8.1:16527083-16527102 | None:intergenic | 30.0% |
!! | TGTGTTTTTCAATTGTAGCT+GGG | + | chr8.1:16527275-16527294 | MS.gene061733:intron | 30.0% |
!! | TTGTGTTTTTCAATTGTAGC+TGG | + | chr8.1:16527274-16527293 | MS.gene061733:intron | 30.0% |
!!! | CTAGTTTTATGAGCATCTTT+TGG | + | chr8.1:16527885-16527904 | MS.gene061733:intron | 30.0% |
!!! | TCATTTGTTTTAGTTTGAGC+AGG | + | chr8.1:16528488-16528507 | MS.gene061733:intron | 30.0% |
!!! | TTAAGAGTGTGTTTTTTGAG+TGG | + | chr8.1:16527612-16527631 | MS.gene061733:intron | 30.0% |
!!! | TTTAAGAATTTTTGGGGTGT+TGG | + | chr8.1:16526878-16526897 | MS.gene061733:intron | 30.0% |
ACAAAACGAAAACCCAAGAA+GGG | - | chr8.1:16526613-16526632 | None:intergenic | 35.0% | |
AGGTGCAATGAAAGAAAATG+AGG | - | chr8.1:16527930-16527949 | None:intergenic | 35.0% | |
CGCATATCAAGTGAAAAGTA+TGG | - | chr8.1:16528871-16528890 | None:intergenic | 35.0% | |
CTCATAAAACTAGAGAAGAG+CGG | - | chr8.1:16527878-16527897 | None:intergenic | 35.0% | |
TACACATTCTGTCTGCAAAT+AGG | - | chr8.1:16528926-16528945 | None:intergenic | 35.0% | |
TATTGGTGTATGGAACAAAC+TGG | + | chr8.1:16527427-16527446 | MS.gene061733:CDS | 35.0% | |
TCATAAAACTAGAGAAGAGC+GGG | - | chr8.1:16527877-16527896 | None:intergenic | 35.0% | |
TCTATGGTAAGTGATCGTTA+TGG | + | chr8.1:16527466-16527485 | MS.gene061733:intron | 35.0% | |
TGATTACGTGAATCTCTTTC+TGG | + | chr8.1:16528332-16528351 | MS.gene061733:intron | 35.0% | |
TTTCTGTGCAATATGTTTGC+AGG | + | chr8.1:16528647-16528666 | MS.gene061733:CDS | 35.0% | |
! | TACTTTTCACTTGATATGCG+TGG | + | chr8.1:16528871-16528890 | MS.gene061733:CDS | 35.0% |
! | TGCAGGTGATTATTCTTTTC+AGG | + | chr8.1:16528664-16528683 | MS.gene061733:intron | 35.0% |
! | TTTCTATTATGCGCCTTTTC+TGG | + | chr8.1:16526640-16526659 | MS.gene061733:CDS | 35.0% |
!! | GTGTTTTTCAATTGTAGCTG+GGG | + | chr8.1:16527276-16527295 | MS.gene061733:intron | 35.0% |
!!! | TTGTTTTAGTTTGAGCAGGT+TGG | + | chr8.1:16528492-16528511 | MS.gene061733:intron | 35.0% |
!!! | TTTTTGTTGGCTTCTTCTCA+TGG | + | chr8.1:16527250-16527269 | MS.gene061733:intron | 35.0% |
AATCCAGGCAGATTTCATAG+AGG | + | chr8.1:16527677-16527696 | MS.gene061733:intron | 40.0% | |
ACGAAACGAAATTCCCTTCT+TGG | + | chr8.1:16526597-16526616 | MS.gene061733:CDS | 40.0% | |
ACTTGATATGCGTGGACAAA+TGG | + | chr8.1:16528879-16528898 | MS.gene061733:CDS | 40.0% | |
CGAAACGAAATTCCCTTCTT+GGG | + | chr8.1:16526598-16526617 | MS.gene061733:CDS | 40.0% | |
GAAACAGCTAATGAACATGC+CGG | + | chr8.1:16527106-16527125 | MS.gene061733:intron | 40.0% | |
GAATAAGCTACCACACCATA+TGG | + | chr8.1:16528596-16528615 | MS.gene061733:CDS | 40.0% | |
GACAAAACGAAAACCCAAGA+AGG | - | chr8.1:16526614-16526633 | None:intergenic | 40.0% | |
GCAGCACAAATCACAATACA+AGG | - | chr8.1:16527573-16527592 | None:intergenic | 40.0% | |
GCTTAAACATGAGGGATTAG+TGG | + | chr8.1:16526735-16526754 | MS.gene061733:intron | 40.0% | |
GGGGTTGCAAAAATCAACAA+GGG | - | chr8.1:16528362-16528381 | None:intergenic | 40.0% | |
GGGTTGCAAAAATCAACAAG+GGG | - | chr8.1:16528361-16528380 | None:intergenic | 40.0% | |
GGTTGCAAAAATCAACAAGG+GGG | - | chr8.1:16528360-16528379 | None:intergenic | 40.0% | |
GTTCCATACACCAATAAGCA+CGG | - | chr8.1:16527423-16527442 | None:intergenic | 40.0% | |
GTTGCAAAAATCAACAAGGG+GGG | - | chr8.1:16528359-16528378 | None:intergenic | 40.0% | |
TCAAAGCAACACTTAGGTCA+GGG | - | chr8.1:16527224-16527243 | None:intergenic | 40.0% | |
TGCTACAAACAAATCAACGC+AGG | - | chr8.1:16528444-16528463 | None:intergenic | 40.0% | |
TGGGGTTGCAAAAATCAACA+AGG | - | chr8.1:16528363-16528382 | None:intergenic | 40.0% | |
TTCCATACACCAATAAGCAC+GGG | - | chr8.1:16527422-16527441 | None:intergenic | 40.0% | |
! | CTACCAAAAGTGGTTTTCTC+CGG | + | chr8.1:16527338-16527357 | MS.gene061733:CDS | 40.0% |
! | GATTTTTGCAACCCCAATGT+AGG | + | chr8.1:16528367-16528386 | MS.gene061733:intron | 40.0% |
! | TACCAAAAGTGGTTTTCTCC+GGG | + | chr8.1:16527339-16527358 | MS.gene061733:CDS | 40.0% |
! | TTCATAGAGGAACTTGTTCG+TGG | + | chr8.1:16527690-16527709 | MS.gene061733:CDS | 40.0% |
!!! | AATTCTTTTAGGGCCCTGTT+TGG | + | chr8.1:16526921-16526940 | MS.gene061733:intron | 40.0% |
!!! | GCTTTGAGGTGTGTTTTTGT+TGG | + | chr8.1:16527237-16527256 | MS.gene061733:intron | 40.0% |
!!! | GTCTGAAGCTTGTTTTGCAA+AGG | + | chr8.1:16528185-16528204 | MS.gene061733:intron | 40.0% |
AAACTAGAGAAGAGCGGGAA+CGG | - | chr8.1:16527872-16527891 | None:intergenic | 45.0% | |
ACCACACCATATGGTTTCGA+AGG | + | chr8.1:16528605-16528624 | MS.gene061733:CDS | 45.0% | |
ACCAGCTATAGCTCCTGTAA+GGG | - | chr8.1:16527302-16527321 | None:intergenic | 45.0% | |
CACAAGCCAATCAAACTGGA+GGG | - | chr8.1:16527972-16527991 | None:intergenic | 45.0% | |
CACACCTCAAAGCAACACTT+AGG | - | chr8.1:16527230-16527249 | None:intergenic | 45.0% | |
CATAGCTTAGTATCACCCAG+AGG | + | chr8.1:16528555-16528574 | MS.gene061733:CDS | 45.0% | |
CCACACCATATGGTTTCGAA+GGG | + | chr8.1:16528606-16528625 | MS.gene061733:CDS | 45.0% | |
CTCAAAGCAACACTTAGGTC+AGG | - | chr8.1:16527225-16527244 | None:intergenic | 45.0% | |
GTTCCTCTATGAAATCTGCC+TGG | - | chr8.1:16527683-16527702 | None:intergenic | 45.0% | |
GTTGGAGTTGCTAATAACGC+TGG | + | chr8.1:16528510-16528529 | MS.gene061733:CDS | 45.0% | |
TATCACCCAGAGGATTGTCA+CGG | + | chr8.1:16528565-16528584 | MS.gene061733:CDS | 45.0% | |
TCACCACAAGCCAATCAAAC+TGG | - | chr8.1:16527976-16527995 | None:intergenic | 45.0% | |
TCATGCCCTTCGAAACCATA+TGG | - | chr8.1:16528614-16528633 | None:intergenic | 45.0% | |
TGCAGTGAGAGTTCCAGAAA+AGG | - | chr8.1:16526656-16526675 | None:intergenic | 45.0% | |
TTCCCGTGCTTATTGGTGTA+TGG | + | chr8.1:16527417-16527436 | MS.gene061733:CDS | 45.0% | |
TTGGGGGAGAGATATAGAGA+AGG | - | chr8.1:16527778-16527797 | None:intergenic | 45.0% | |
TTTCTCCGGGGAGTTTCATT+GGG | + | chr8.1:16527352-16527371 | MS.gene061733:CDS | 45.0% | |
! | ACCAAAAGTGGTTTTCTCCG+GGG | + | chr8.1:16527340-16527359 | MS.gene061733:CDS | 45.0% |
! | ATGGAACAAACTGGTTCACG+CGG | + | chr8.1:16527436-16527455 | MS.gene061733:CDS | 45.0% |
! | CTCACTGCATGTTTTGCCTT+TGG | + | chr8.1:16526667-16526686 | MS.gene061733:CDS | 45.0% |
! | GTATTGTGATTTGTGCTGCC+TGG | + | chr8.1:16527574-16527593 | MS.gene061733:intron | 45.0% |
! | TAGAGGAACTTGTTCGTGGA+AGG | + | chr8.1:16527694-16527713 | MS.gene061733:CDS | 45.0% |
! | TATGGTTTCGAAGGGCATGA+AGG | + | chr8.1:16528614-16528633 | MS.gene061733:CDS | 45.0% |
! | TGAAAAGTATGGTCGCAACG+AGG | - | chr8.1:16528860-16528879 | None:intergenic | 45.0% |
! | TTTTCTCCGGGGAGTTTCAT+TGG | + | chr8.1:16527351-16527370 | MS.gene061733:CDS | 45.0% |
!! | CTGACCTAAGTGTTGCTTTG+AGG | + | chr8.1:16527223-16527242 | MS.gene061733:intron | 45.0% |
AAGCCAATCAAACTGGAGGG+AGG | - | chr8.1:16527969-16527988 | None:intergenic | 50.0% | |
ATCACCCAGAGGATTGTCAC+GGG | + | chr8.1:16528566-16528585 | MS.gene061733:CDS | 50.0% | |
CACCAGCTATAGCTCCTGTA+AGG | - | chr8.1:16527303-16527322 | None:intergenic | 50.0% | |
CCACAAGCCAATCAAACTGG+AGG | - | chr8.1:16527973-16527992 | None:intergenic | 50.0% | |
CCCTTCGAAACCATATGGTG+TGG | - | chr8.1:16528609-16528628 | None:intergenic | 50.0% | |
GAATCCCGTGACAATCCTCT+GGG | - | chr8.1:16528573-16528592 | None:intergenic | 50.0% | |
GCAGCTAAGGCTACCAAAAG+TGG | + | chr8.1:16527328-16527347 | MS.gene061733:CDS | 50.0% | |
TCTCCTCCCTCCAGTTTGAT+TGG | + | chr8.1:16527963-16527982 | MS.gene061733:intron | 50.0% | |
TGAATCCCGTGACAATCCTC+TGG | - | chr8.1:16528574-16528593 | None:intergenic | 50.0% | |
TGGAAGCTTCCCGTGCTTAT+TGG | + | chr8.1:16527410-16527429 | MS.gene061733:CDS | 50.0% | |
! | AGCTGGTGCTTTTGCAGCTA+AGG | + | chr8.1:16527315-16527334 | MS.gene061733:CDS | 50.0% |
! | TATACTCTCGGTGGAGGTGT+TGG | + | chr8.1:16527390-16527409 | MS.gene061733:CDS | 50.0% |
! | TCCCCGGAGAAAACCACTTT+TGG | - | chr8.1:16527344-16527363 | None:intergenic | 50.0% |
!! | CCTCCAGTTTGATTGGCTTG+TGG | + | chr8.1:16527970-16527989 | MS.gene061733:intron | 50.0% |
!! | GTTTCATTGGGTGCCATTGC+CGG | + | chr8.1:16527364-16527383 | MS.gene061733:CDS | 50.0% |
!! | TTTCATTGGGTGCCATTGCC+GGG | + | chr8.1:16527365-16527384 | MS.gene061733:CDS | 50.0% |
ATTGTAGCTGGGGCCCTTAC+AGG | + | chr8.1:16527286-16527305 | MS.gene061733:intron | 55.0% | |
CATTGCCGGGGCTATACTCT+CGG | + | chr8.1:16527378-16527397 | MS.gene061733:CDS | 55.0% | |
GCCCTTACAGGAGCTATAGC+TGG | + | chr8.1:16527298-16527317 | MS.gene061733:CDS | 55.0% | |
TGGCACCCAATGAAACTCCC+CGG | - | chr8.1:16527360-16527379 | None:intergenic | 55.0% | |
! | TTCGAAGGGCATGAAGGCAG+AGG | + | chr8.1:16528620-16528639 | MS.gene061733:CDS | 55.0% |
!! | TTCATTGGGTGCCATTGCCG+GGG | + | chr8.1:16527366-16527385 | MS.gene061733:CDS | 55.0% |
TTCACGCGGCGCGTCTTCTA+TGG | + | chr8.1:16527450-16527469 | MS.gene061733:CDS | 60.0% | |
! | CGAGAGTATAGCCCCGGCAA+TGG | - | chr8.1:16527380-16527399 | None:intergenic | 60.0% |
! | CTCCACCGAGAGTATAGCCC+CGG | - | chr8.1:16527386-16527405 | None:intergenic | 60.0% |
CGGGGCTATACTCTCGGTGG+AGG | + | chr8.1:16527384-16527403 | MS.gene061733:CDS | 65.0% | |
TGCCGGGGCTATACTCTCGG+TGG | + | chr8.1:16527381-16527400 | MS.gene061733:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 16526583 | 16528946 | 16526583 | ID=MS.gene061733 |
chr8.1 | mRNA | 16526583 | 16528946 | 16526583 | ID=MS.gene061733.t1;Parent=MS.gene061733 |
chr8.1 | exon | 16526583 | 16526688 | 16526583 | ID=MS.gene061733.t1.exon1;Parent=MS.gene061733.t1 |
chr8.1 | CDS | 16526583 | 16526688 | 16526583 | ID=cds.MS.gene061733.t1;Parent=MS.gene061733.t1 |
chr8.1 | exon | 16527293 | 16527471 | 16527293 | ID=MS.gene061733.t1.exon2;Parent=MS.gene061733.t1 |
chr8.1 | CDS | 16527293 | 16527471 | 16527293 | ID=cds.MS.gene061733.t1;Parent=MS.gene061733.t1 |
chr8.1 | exon | 16527684 | 16527767 | 16527684 | ID=MS.gene061733.t1.exon3;Parent=MS.gene061733.t1 |
chr8.1 | CDS | 16527684 | 16527767 | 16527684 | ID=cds.MS.gene061733.t1;Parent=MS.gene061733.t1 |
chr8.1 | exon | 16528501 | 16528668 | 16528501 | ID=MS.gene061733.t1.exon4;Parent=MS.gene061733.t1 |
chr8.1 | CDS | 16528501 | 16528668 | 16528501 | ID=cds.MS.gene061733.t1;Parent=MS.gene061733.t1 |
chr8.1 | exon | 16528824 | 16528946 | 16528824 | ID=MS.gene061733.t1.exon5;Parent=MS.gene061733.t1 |
chr8.1 | CDS | 16528824 | 16528946 | 16528824 | ID=cds.MS.gene061733.t1;Parent=MS.gene061733.t1 |
Gene Sequence |
Protein sequence |