AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene061892

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061892.t1 MTR_7g099830 97.517 443 11 0 1 443 1 443 0.0 893
MS.gene061892.t1 MTR_1g069000 64.848 495 106 14 1 442 1 480 0.0 594
MS.gene061892.t1 MTR_8g067090 41.844 141 72 1 7 147 13 143 1.88e-30 122
MS.gene061892.t1 MTR_8g471120 41.844 141 72 1 7 147 13 143 1.88e-30 122
MS.gene061892.t1 MTR_8g067080 47.619 105 55 0 7 111 13 117 4.94e-30 120
MS.gene061892.t1 MTR_8g067080 47.619 105 55 0 7 111 13 117 5.50e-30 120
MS.gene061892.t1 MTR_8g471110 47.619 105 55 0 7 111 13 117 5.50e-30 120
MS.gene061892.t1 MTR_2g030230 48.810 84 42 1 5 87 19 102 6.79e-21 93.6
MS.gene061892.t1 MTR_8g088320 45.455 88 47 1 1 87 6 93 3.14e-20 91.7
MS.gene061892.t1 MTR_2g080950 46.835 79 42 0 5 83 17 95 4.92e-20 92.8
MS.gene061892.t1 MTR_8g464390 46.835 79 42 0 5 83 17 95 1.50e-19 91.3
MS.gene061892.t1 MTR_6g080710 51.351 74 36 0 4 77 16 89 5.00e-19 87.0
MS.gene061892.t1 MTR_8g038400 48.718 78 39 1 5 81 18 95 9.02e-18 84.7
MS.gene061892.t1 MTR_3g017500 48.052 77 39 1 6 81 23 99 8.87e-17 82.0
MS.gene061892.t1 MTR_3g017500 48.052 77 39 1 6 81 53 129 1.66e-16 81.3
MS.gene061892.t1 MTR_4g074170 54.717 53 24 0 10 62 485 537 1.49e-13 73.2
MS.gene061892.t1 MTR_8g100100 27.778 198 129 6 16 201 512 707 3.89e-13 72.0
MS.gene061892.t1 MTR_8g100100 27.778 198 129 6 16 201 506 701 3.98e-13 72.0
MS.gene061892.t1 MTR_7g020860 47.826 69 34 1 16 82 514 582 1.31e-12 70.1
MS.gene061892.t1 MTR_7g020860 50.000 64 30 1 16 77 514 577 1.42e-12 70.1
MS.gene061892.t1 MTR_3g098680 42.424 66 36 1 19 82 512 577 9.63e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061892.t1 AT2G37550 60.554 469 144 11 1 442 1 455 2.71e-177 504
MS.gene061892.t1 AT2G37550 60.554 469 144 11 1 442 1 455 2.71e-177 504
MS.gene061892.t1 AT3G53710 59.499 479 136 16 1 442 1 458 5.66e-171 488
MS.gene061892.t1 AT3G53710 59.499 479 136 16 1 442 1 458 5.66e-171 488
MS.gene061892.t1 AT3G53710 59.499 479 136 16 1 442 1 458 5.66e-171 488
MS.gene061892.t1 AT4G17890 50.435 115 52 1 7 116 16 130 6.86e-33 128
MS.gene061892.t1 AT4G17890 50.435 115 52 1 7 116 16 130 1.42e-32 128
MS.gene061892.t1 AT5G46750 49.565 115 53 1 7 116 13 127 9.90e-32 125
MS.gene061892.t1 AT2G35210 50.476 105 52 0 7 111 13 117 1.26e-30 122
MS.gene061892.t1 AT2G35210 50.476 105 52 0 7 111 13 117 2.72e-30 120
MS.gene061892.t1 AT4G05330 48.810 84 42 1 5 87 16 99 3.66e-22 97.4
MS.gene061892.t1 AT4G05330 48.810 84 42 1 5 87 16 99 3.66e-22 97.4
MS.gene061892.t1 AT4G21160 47.619 84 43 1 5 87 16 99 6.91e-21 93.6
MS.gene061892.t1 AT4G21160 47.619 84 43 1 5 87 16 99 6.91e-21 93.6
MS.gene061892.t1 AT4G21160 47.619 84 43 1 5 87 16 99 6.91e-21 93.6
MS.gene061892.t1 AT4G21160 47.619 84 43 1 5 87 16 99 6.91e-21 93.6
MS.gene061892.t1 AT3G17660 52.113 71 34 0 7 77 19 89 1.02e-20 89.7
MS.gene061892.t1 AT3G17660 52.113 71 34 0 7 77 19 89 1.38e-20 90.9
MS.gene061892.t1 AT3G17660 50.000 74 37 0 4 77 16 89 3.23e-20 90.1
MS.gene061892.t1 AT5G54310 46.988 83 43 1 2 83 13 95 4.65e-20 92.8
MS.gene061892.t1 AT3G07940 50.649 77 37 1 6 81 49 125 3.45e-19 87.4
MS.gene061892.t1 AT3G07940 50.649 77 37 1 6 81 49 125 9.57e-19 88.2
MS.gene061892.t1 AT1G60860 57.143 56 21 1 7 62 362 414 2.18e-14 75.9
MS.gene061892.t1 AT1G60860 57.143 56 21 1 7 62 473 525 2.32e-14 75.9
MS.gene061892.t1 AT1G60860 57.143 56 21 1 7 62 302 354 2.56e-14 75.5
MS.gene061892.t1 AT5G13300 50.725 69 32 1 16 82 513 581 1.51e-13 73.6
MS.gene061892.t1 AT3G17660 52.941 51 24 0 4 54 16 66 2.12e-13 69.7
MS.gene061892.t1 AT5G61980 46.377 69 35 1 16 82 510 578 6.90e-13 71.2
MS.gene061892.t1 AT1G10870 50.943 53 26 0 10 62 473 525 1.94e-12 69.7
MS.gene061892.t1 AT1G10870 50.943 53 26 0 10 62 473 525 2.20e-12 69.7

Find 146 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGCCCATTGGGGATTCTTT+TGG 0.237541 7.2:-12138059 None:intergenic
GTGGTGGTTGGGATGATAAT+TGG 0.288748 7.2:+12138430 MS.gene061892:CDS
AAATTCATCATCGTCATCTT+TGG 0.293774 7.2:-12140899 None:intergenic
CAGAGTACTGGTGATGTAAT+TGG 0.303983 7.2:+12138516 MS.gene061892:CDS
GTTCTTCCTTCCTTGTATCT+TGG 0.306753 7.2:-12140822 None:intergenic
ATTCCCATTCGGGTAATCTT+TGG 0.308780 7.2:-12140647 None:intergenic
CGATCTCCAGATCAAGAAAA+TGG 0.320437 7.2:+12138185 MS.gene061892:CDS
GGAGGCTTCTGCTGCGAATA+AGG 0.322641 7.2:+12138611 MS.gene061892:CDS
GAATTTGATGATAAATCTTT+TGG 0.327269 7.2:+12140916 MS.gene061892:CDS
GCCGAGGCCACGGTGTTTGC+CGG 0.343680 7.2:-12138118 None:intergenic
GGTGGGAAGTATGTTGGATT+TGG 0.343971 7.2:+12138699 MS.gene061892:CDS
ACTCAAACTCTTGGGATGAT+TGG 0.347103 7.2:+12140794 MS.gene061892:CDS
TGGAAAAGGAAAGCCACTTC+TGG 0.354221 7.2:+12138392 MS.gene061892:CDS
CGCGTGGTGGTGGTGATATT+AGG 0.356783 7.2:+12138487 MS.gene061892:CDS
CATAATGGGACGTCAGGTTC+TGG 0.362771 7.2:+12140940 MS.gene061892:CDS
TTCTCAATACGGAATCTCTA+AGG 0.367159 7.2:+12138242 MS.gene061892:CDS
GTTGGATTTGGATCTAGTCC+TGG 0.369759 7.2:+12138711 MS.gene061892:CDS
GCAGATCTTGTTTGAAGGTT+CGG 0.385181 7.2:-12138025 None:intergenic
TGGTGGTTGGGATGATAATT+GGG 0.396409 7.2:+12138431 MS.gene061892:CDS
TGATGAAGGTTGTCCTTCTC+TGG 0.401226 7.2:-12140749 None:intergenic
GTAAGAAACGGAGGCCCATT+GGG 0.401948 7.2:-12138070 None:intergenic
TCCTCATAATAATGATGATT+GGG 0.405151 7.2:+12140861 MS.gene061892:CDS
CTCAAACTCTTGGGATGATT+GGG 0.405409 7.2:+12140795 MS.gene061892:CDS
CGAATGGGAATTCTGATAAC+TGG 0.408968 7.2:+12140659 MS.gene061892:CDS
GGTGATGTAATTGGATTTGT+TGG 0.409468 7.2:+12138525 MS.gene061892:CDS
CAATGGGCCTCCGTTTCTTA+CGG 0.411920 7.2:+12138072 MS.gene061892:CDS
ACGTCAGGTTCTGGCTGGAC+AGG 0.413255 7.2:+12140949 MS.gene061892:CDS
TAATGATGATTGGGCTGGTT+GGG 0.416996 7.2:+12140870 MS.gene061892:CDS
TCCGGCAAACACCGTGGCCT+CGG 0.417844 7.2:+12138117 MS.gene061892:CDS
CTCCTCATAATAATGATGAT+TGG 0.428305 7.2:+12140860 MS.gene061892:CDS
GTATAATTCAAATGCTGCTT+CGG 0.429421 7.2:+12138284 MS.gene061892:CDS
ATCCCAAGAGTTTGAGTGAT+AGG 0.432160 7.2:-12140788 None:intergenic
GCGTGATCCACCTGTTGTTA+AGG 0.434361 7.2:+12138350 MS.gene061892:CDS
GATGGTGATAGTTATGGTTA+TGG 0.442183 7.2:+12138462 MS.gene061892:CDS
AACACGTTCCTTTCTCAATA+CGG 0.445873 7.2:+12138231 MS.gene061892:CDS
ACAGGAGGAGGCTTTCACTA+AGG 0.450059 7.2:+12140967 MS.gene061892:CDS
ATACCTATCACTCAAACTCT+TGG 0.450157 7.2:+12140785 MS.gene061892:CDS
TTTGGTCATAATGGGACGTC+AGG 0.452576 7.2:+12140934 MS.gene061892:CDS
CAGTTATCAGAATTCCCATT+CGG 0.453777 7.2:-12140658 None:intergenic
GCTAGTACTCGTGCTGGAAA+AGG 0.455171 7.2:+12138378 MS.gene061892:CDS
AGCAGCATTTGAATTATACT+TGG 0.456159 7.2:-12138280 None:intergenic
CATGAAAACGCCGTAAGAAA+CGG 0.457995 7.2:-12138082 None:intergenic
CGTAAGAAACGGAGGCCCAT+TGG 0.458376 7.2:-12138071 None:intergenic
GTAATTGGATTTGTTGGAAG+TGG 0.458947 7.2:+12138531 MS.gene061892:CDS
TGAGGAGCTGATCCTTTAGC+TGG 0.460566 7.2:-12140844 None:intergenic
GGTTCTGGCTGGACAGGAGG+AGG 0.461646 7.2:+12140955 MS.gene061892:CDS
GTCTTCCTCCGTCGCAGGGT+GGG 0.462412 7.2:+12138682 MS.gene061892:CDS
TAGAGATTCCGTATTGAGAA+AGG 0.463462 7.2:-12138239 None:intergenic
CTAGCATTCTCCTTAACAAC+AGG 0.465760 7.2:-12138360 None:intergenic
GGAGAGTCTTCCTCCGTCGC+AGG 0.472411 7.2:+12138677 MS.gene061892:CDS
TCGACGCAGATCTTGTTTGA+AGG 0.475560 7.2:-12138030 None:intergenic
GATCCGTTACAATGGATTCA+TGG 0.484084 7.2:+12138160 MS.gene061892:CDS
CATGGCGTTGGCCTCTCAAA+AGG 0.490970 7.2:+12140612 MS.gene061892:CDS
GCCCAATCATCATTATTATG+AGG 0.492124 7.2:-12140862 None:intergenic
TACCTATCACTCAAACTCTT+GGG 0.496672 7.2:+12140786 MS.gene061892:CDS
AAGGTTCGGATTGGAGTTCA+CGG 0.501839 7.2:-12138011 None:intergenic
TTGGATTTGGATCTAGTCCT+GGG 0.501961 7.2:+12138712 MS.gene061892:CDS
TTAGTTTGTCCACCTGATGA+AGG 0.509540 7.2:-12140763 None:intergenic
AATGATGATGGTGATAGTTA+TGG 0.511012 7.2:+12138456 MS.gene061892:CDS
GAGAATGCTAGTACTCGTGC+TGG 0.511201 7.2:+12138372 MS.gene061892:CDS
TGAGGAGAAATCCTTTGAGC+AGG 0.512110 7.2:-12138735 None:intergenic
TTATCTGTCTGTTGTTTCTG+AGG 0.516783 7.2:+12138764 MS.gene061892:CDS
CTACGTCGAATGGTGGTGGT+TGG 0.519909 7.2:+12138418 MS.gene061892:CDS
CGATCGCGGAAGGTCGTTCG+TGG 0.522521 7.2:+12138328 MS.gene061892:CDS
AGATGTGAACGCCGAGGCCA+CGG 0.522534 7.2:-12138128 None:intergenic
GGACATGGGGTATAATGAAA+GGG 0.522706 7.2:+12140587 MS.gene061892:CDS
TACGTCGAATGGTGGTGGTT+GGG 0.524169 7.2:+12138419 MS.gene061892:CDS
CTAGTCCTGGGCCTGCTCAA+AGG 0.524286 7.2:+12138724 MS.gene061892:CDS
TCACCAAAGATTACCCGAAT+GGG 0.525967 7.2:+12140644 MS.gene061892:CDS
ACTCAGAAGACATCAGAGAT+TGG 0.527015 7.2:+12140559 MS.gene061892:CDS
TATTTATACGAGGACACAGT+TGG 0.527165 7.2:+12138590 MS.gene061892:CDS
CTTCTGGCTGCTACGTCGAA+TGG 0.532147 7.2:+12138408 MS.gene061892:CDS
TCTTGTTTGAAGGTTCGGAT+TGG 0.534491 7.2:-12138020 None:intergenic
ATGGGACGTCAGGTTCTGGC+TGG 0.534980 7.2:+12140944 MS.gene061892:CDS
GGGTATAATGAAAGGGGTCA+TGG 0.536054 7.2:+12140594 MS.gene061892:CDS
CGCATTCAAGCGATCGCGGA+AGG 0.537050 7.2:+12138318 MS.gene061892:CDS
AGTTATCAGAATTCCCATTC+GGG 0.537129 7.2:-12140657 None:intergenic
TACTTCCCACCCTGCGACGG+AGG 0.538040 7.2:-12138687 None:intergenic
CAGAGATTGGACAAAGGACA+TGG 0.538329 7.2:+12140572 MS.gene061892:CDS
AGAGAAGGACAACCTTCATC+AGG 0.539207 7.2:+12140751 MS.gene061892:CDS
GGGAATTGGTAAATTGTCCA+TGG 0.539257 7.2:+12138899 MS.gene061892:intron
GAAATCCTTTGAGCAGGCCC+AGG 0.541666 7.2:-12138729 None:intergenic
GGTTATGGATCGCGTGGTGG+TGG 0.546645 7.2:+12138477 MS.gene061892:CDS
ATTAGGAGGAATCAGAGTAC+TGG 0.548491 7.2:+12138504 MS.gene061892:CDS
TTCCCAAAAGAATCCCCAAT+GGG 0.549288 7.2:+12138056 MS.gene061892:CDS
CAGATCAAGAAAATGGAAGC+AGG 0.550806 7.2:+12138192 MS.gene061892:CDS
CATAATAATGATGATTGGGC+TGG 0.551691 7.2:+12140865 MS.gene061892:CDS
TCGCAGGGTGGGAAGTATGT+TGG 0.551854 7.2:+12138693 MS.gene061892:CDS
AAAGGAACGTGTTGAGATTG+CGG 0.551893 7.2:-12138221 None:intergenic
TGCGACGGAGGAAGACTCTC+CGG 0.552924 7.2:-12138675 None:intergenic
TCTTCTACTTCTACCAGAGA+AGG 0.557439 7.2:+12140736 MS.gene061892:CDS
AATGAAAGGGGTCATGGCGT+TGG 0.559488 7.2:+12140600 MS.gene061892:CDS
GTGGAGTTACACCTTCGTCC+AGG 0.560060 7.2:+12138550 MS.gene061892:CDS
GCTGCTACGTCGAATGGTGG+TGG 0.564958 7.2:+12138414 MS.gene061892:CDS
AGGAAGGAAGAACCAGCTAA+AGG 0.565852 7.2:+12140832 MS.gene061892:CDS
GTTGGCCTCTCAAAAGGTTG+AGG 0.569071 7.2:+12140618 MS.gene061892:CDS
TCAATCAAGAGAATAAAAGC+TGG 0.569255 7.2:+12140710 MS.gene061892:CDS
GGCGGAGAATGAATCGAGAC+CGG 0.572935 7.2:+12138656 MS.gene061892:CDS
TTCACCAAAGATTACCCGAA+TGG 0.575200 7.2:+12140643 MS.gene061892:CDS
CTTCGTCCGATCCGTTACAA+TGG 0.578327 7.2:+12138152 MS.gene061892:CDS
AGGACATGGGGTATAATGAA+AGG 0.578601 7.2:+12140586 MS.gene061892:CDS
ACCGCATCATGGCGGCGACA+CGG 0.578817 7.2:+12137983 None:intergenic
TTATACGAGGACACAGTTGG+AGG 0.582497 7.2:+12138593 MS.gene061892:CDS
GCATTCTCCTTAACAACAGG+TGG 0.583281 7.2:-12138357 None:intergenic
AGTCTTCCTCCGTCGCAGGG+TGG 0.583357 7.2:+12138681 MS.gene061892:CDS
GATAATTGGGATAATGATGA+TGG 0.583376 7.2:+12138444 MS.gene061892:CDS
GAGAGTCTTCCTCCGTCGCA+GGG 0.585493 7.2:+12138678 MS.gene061892:CDS
GCTTCTGCTGCGAATAAGGA+AGG 0.586669 7.2:+12138615 MS.gene061892:CDS
ATAATGATGATTGGGCTGGT+TGG 0.587457 7.2:+12140869 MS.gene061892:CDS
CATTGTAACGGATCGGACGA+AGG 0.591479 7.2:-12138151 None:intergenic
TTCGACGTAGCAGCCAGAAG+TGG 0.594259 7.2:-12138405 None:intergenic
CGATCGCATTCAAGCGATCG+CGG 0.597188 7.2:+12138314 MS.gene061892:CDS
GTCGATTTCGACCTGGACGA+AGG 0.600405 7.2:-12138561 None:intergenic
TCAGGTTCTGGCTGGACAGG+AGG 0.603150 7.2:+12140952 MS.gene061892:CDS
ACATACTTCCCACCCTGCGA+CGG 0.603399 7.2:-12138690 None:intergenic
TCCTTTCAGGTAAAGGACGG+TGG 0.603434 7.2:+12140499 MS.gene061892:intron
GTGGTGGTGGTGATATTAGG+AGG 0.604239 7.2:+12138490 MS.gene061892:CDS
TTCATGTGTCTCGAATGCTC+CGG 0.604613 7.2:+12138099 MS.gene061892:CDS
AGTAGCAGATTGAGCAACCA+TGG 0.614562 7.2:-12138916 None:intergenic
CGATCGCTTGAATGCGATCG+CGG 0.616517 7.2:-12138311 None:intergenic
ATTGGGACAACCAAGATACA+AGG 0.625922 7.2:+12140812 MS.gene061892:CDS
TACTAAAGAGATCACTGCCA+AGG 0.625987 7.2:+12138935 MS.gene061892:CDS
ATGAATCCATTGTAACGGAT+CGG 0.627111 7.2:-12138158 None:intergenic
GGACCATGAATCCATTGTAA+CGG 0.633410 7.2:-12138163 None:intergenic
ATCCTCGGTCGATTTCGACC+TGG 0.635556 7.2:-12138568 None:intergenic
AGAGATTGGACAAAGGACAT+GGG 0.640988 7.2:+12140573 MS.gene061892:CDS
TGTCCTCGTATAAATATCCT+CGG 0.642483 7.2:-12138583 None:intergenic
GAAGGACAACCTTCATCAGG+TGG 0.644075 7.2:+12140754 MS.gene061892:CDS
GTTCCCAAAAGAATCCCCAA+TGG 0.657239 7.2:+12138055 MS.gene061892:CDS
GCATCATGGCGGCGACACGG+CGG 0.663367 7.2:+12137986 None:intergenic
TAAGAAACGGAGGCCCATTG+GGG 0.663870 7.2:-12138069 None:intergenic
CTGGCTGCTACGTCGAATGG+TGG 0.665583 7.2:+12138411 MS.gene061892:CDS
GTCCAGGTCGAAATCGACCG+AGG 0.668027 7.2:+12138566 MS.gene061892:CDS
ACAGACAGATAATCATTCTG+AGG 0.672182 7.2:-12138753 None:intergenic
GGACAACCAAGATACAAGGA+AGG 0.673526 7.2:+12140816 MS.gene061892:CDS
GAGATTGGACAAAGGACATG+GGG 0.675059 7.2:+12140574 MS.gene061892:CDS
AGACATCAGAGATTGGACAA+AGG 0.675530 7.2:+12140566 MS.gene061892:CDS
AGTTATGGTTATGGATCGCG+TGG 0.677987 7.2:+12138471 MS.gene061892:CDS
GAAAACGCCGTAAGAAACGG+AGG 0.679467 7.2:-12138079 None:intergenic
GGACGGTGGTTATGATCACA+AGG 0.683948 7.2:+12140513 MS.gene061892:CDS
GACATGGGGTATAATGAAAG+GGG 0.684113 7.2:+12140588 MS.gene061892:CDS
ATCAAGAAAATGGAAGCAGG+CGG 0.690027 7.2:+12138195 MS.gene061892:CDS
TATGGTTATGGATCGCGTGG+TGG 0.695048 7.2:+12138474 MS.gene061892:CDS
GAATGCTCCGGCAAACACCG+TGG 0.703523 7.2:+12138111 MS.gene061892:CDS
CGAAGGAGATGTGAACGCCG+AGG 0.708021 7.2:-12138134 None:intergenic
CGACCGAGGATATTTATACG+AGG 0.717120 7.2:+12138580 MS.gene061892:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTATACAAATTACCT+TGG - chr7.2:12138955-12138974 None:intergenic 15.0%
!!! CACTTTTTATAGAAAAAAAT+AGG - chr7.2:12138999-12139018 None:intergenic 15.0%
!!! TTGAATTTTATGTTTATGTT+CGG + chr7.2:12139623-12139642 MS.gene061892:intron 15.0%
!! AAAATCAAGAAAAAACTTGA+AGG - chr7.2:12139472-12139491 None:intergenic 20.0%
!! AAATCAAGAAAAAACTTGAA+GGG - chr7.2:12139471-12139490 None:intergenic 20.0%
!! AACAATACAGAAATAATAGA+GGG - chr7.2:12139381-12139400 None:intergenic 20.0%
!! TAGTTAAAACAAAGGATAAA+AGG - chr7.2:12139813-12139832 None:intergenic 20.0%
!! TGCGTGAATAAATTATTTAA+TGG + chr7.2:12139428-12139447 MS.gene061892:intron 20.0%
!!! ATAAATCTTTTGGTCATAAT+GGG + chr7.2:12140926-12140945 MS.gene061892:CDS 20.0%
!!! CTATGTTTTGTTTGTTTTTA+GGG + chr7.2:12138879-12138898 MS.gene061892:intron 20.0%
!!! GAATTTGATGATAAATCTTT+TGG + chr7.2:12140916-12140935 MS.gene061892:CDS 20.0%
!!! TAAGAAAATTTAGAGCTTTT+AGG + chr7.2:12140358-12140377 MS.gene061892:intron 20.0%
!!! TCTATGTTTTGTTTGTTTTT+AGG + chr7.2:12138878-12138897 MS.gene061892:intron 20.0%
! AATCAAGAAAAAACTTGAAG+GGG - chr7.2:12139470-12139489 None:intergenic 25.0%
! AGGAAAAAATATAGTCAAAC+AGG - chr7.2:12140483-12140502 None:intergenic 25.0%
! ATTAGCAGACAAATCATATT+AGG - chr7.2:12140008-12140027 None:intergenic 25.0%
! GAACAATACAGAAATAATAG+AGG - chr7.2:12139382-12139401 None:intergenic 25.0%
! TACTGTCTCAGTTATATTTA+AGG + chr7.2:12139530-12139549 MS.gene061892:intron 25.0%
! TCCTCATAATAATGATGATT+GGG + chr7.2:12140861-12140880 MS.gene061892:CDS 25.0%
! TTCAGTCATAGTTAAAACAA+AGG - chr7.2:12139821-12139840 None:intergenic 25.0%
! TTCTGTATTGTTCAACTAAT+TGG + chr7.2:12139389-12139408 MS.gene061892:intron 25.0%
!! GATAAATCTTTTGGTCATAA+TGG + chr7.2:12140925-12140944 MS.gene061892:CDS 25.0%
!! TGTCTATCATTTTCATTTTG+TGG - chr7.2:12140685-12140704 None:intergenic 25.0%
!!! CAAGTTTTTTCTTGATTTTG+AGG + chr7.2:12139473-12139492 MS.gene061892:intron 25.0%
!!! CCATGTTTTAGATTTGAAAA+TGG + chr7.2:12139970-12139989 MS.gene061892:intron 25.0%
!!! CCATTTTCAAATCTAAAACA+TGG - chr7.2:12139973-12139992 None:intergenic 25.0%
!!! CTGAAATCTTATTTTGTTGA+GGG + chr7.2:12140285-12140304 MS.gene061892:intron 25.0%
!!! GTTTTGTTTTCGTGTTTTAT+GGG + chr7.2:12138826-12138845 MS.gene061892:intron 25.0%
!!! TATTTTTTCCTTTCAGGTAA+AGG + chr7.2:12140492-12140511 MS.gene061892:intron 25.0%
!!! TGACTATATTTTTTCCTTTC+AGG + chr7.2:12140486-12140505 MS.gene061892:intron 25.0%
!!! TGTTTTGTTTTCGTGTTTTA+TGG + chr7.2:12138825-12138844 MS.gene061892:intron 25.0%
!!! TTTGTTTGTTTTTAGGGAAT+TGG + chr7.2:12138885-12138904 MS.gene061892:intron 25.0%
AAATTCATCATCGTCATCTT+TGG - chr7.2:12140902-12140921 None:intergenic 30.0%
ACATTAACAGCAAAAACATG+AGG - chr7.2:12139315-12139334 None:intergenic 30.0%
ACCAATTCTCAAACTCTTTA+AGG + chr7.2:12139562-12139581 MS.gene061892:intron 30.0%
ACCTTAAAGAGTTTGAGAAT+TGG - chr7.2:12139566-12139585 None:intergenic 30.0%
AGCAGCATTTGAATTATACT+TGG - chr7.2:12138283-12138302 None:intergenic 30.0%
ATAACTAAGATTTGACCGAA+TGG + chr7.2:12140152-12140171 MS.gene061892:intron 30.0%
ATCAAGAAAAAACTTGAAGG+GGG - chr7.2:12139469-12139488 None:intergenic 30.0%
ATCGTATTTCTCCATTCATA+TGG + chr7.2:12140415-12140434 MS.gene061892:intron 30.0%
CCTCAACAAAATAAGATTTC+AGG - chr7.2:12140287-12140306 None:intergenic 30.0%
CTCCTCATAATAATGATGAT+TGG + chr7.2:12140860-12140879 MS.gene061892:CDS 30.0%
GATAATTGGGATAATGATGA+TGG + chr7.2:12138444-12138463 MS.gene061892:CDS 30.0%
GCATTGAAATTCCATATGAA+TGG - chr7.2:12140429-12140448 None:intergenic 30.0%
GCTAAATTTACTAGAACCAA+CGG - chr7.2:12140082-12140101 None:intergenic 30.0%
TAAGATTTCAGGAAGCTAAA+TGG - chr7.2:12140276-12140295 None:intergenic 30.0%
TATTAATGAGCTTCAGTTCA+GGG - chr7.2:12139203-12139222 None:intergenic 30.0%
TCAATCAAGAGAATAAAAGC+TGG + chr7.2:12140710-12140729 MS.gene061892:CDS 30.0%
TGCGTTATTAATGAACTTCA+AGG - chr7.2:12139260-12139279 None:intergenic 30.0%
TTAACTATGACTGAAAAGCA+AGG + chr7.2:12139826-12139845 MS.gene061892:intron 30.0%
TTATGTTAGCATCTTGAGAA+AGG + chr7.2:12139685-12139704 MS.gene061892:intron 30.0%
TTATTAATGAGCTTCAGTTC+AGG - chr7.2:12139204-12139223 None:intergenic 30.0%
! AAGTCTTTTGGCAATCTTAT+TGG + chr7.2:12139597-12139616 MS.gene061892:intron 30.0%
! AATTCTCAAACTCTTTAAGG+TGG + chr7.2:12139565-12139584 MS.gene061892:intron 30.0%
! ATATGATTTGTCTGCTAATC+TGG + chr7.2:12140009-12140028 MS.gene061892:intron 30.0%
! GTATAATTCAAATGCTGCTT+CGG + chr7.2:12138284-12138303 MS.gene061892:CDS 30.0%
! TTTTCGTGTTTTATGGGAAA+TGG + chr7.2:12138832-12138851 MS.gene061892:intron 30.0%
!! AATGATGATGGTGATAGTTA+TGG + chr7.2:12138456-12138475 MS.gene061892:CDS 30.0%
!! AATTTAGAGCTTTTAGGCAT+AGG + chr7.2:12140364-12140383 MS.gene061892:intron 30.0%
!! TTTCTTGATTTTGAGGATAG+AGG + chr7.2:12139480-12139499 MS.gene061892:intron 30.0%
!!! ACGTTATTTTTGTTCAGAGA+TGG + chr7.2:12140333-12140352 MS.gene061892:intron 30.0%
!!! CCTGAAATCTTATTTTGTTG+AGG + chr7.2:12140284-12140303 MS.gene061892:intron 30.0%
!!! TGGATTTTTTGCAAGTCTTT+TGG + chr7.2:12139585-12139604 MS.gene061892:intron 30.0%
!!! TGTTTTTGCTGTTAATGTTG+AGG + chr7.2:12139317-12139336 MS.gene061892:intron 30.0%
AAAGGATAAAAGGTGACAAC+TGG - chr7.2:12139803-12139822 None:intergenic 35.0%
AACACGTTCCTTTCTCAATA+CGG + chr7.2:12138231-12138250 MS.gene061892:CDS 35.0%
AACCAAACTCAAGATTACCA+GGG - chr7.2:12139108-12139127 None:intergenic 35.0%
ACAGACAGATAATCATTCTG+AGG - chr7.2:12138756-12138775 None:intergenic 35.0%
AGATTTGACCGAATGGAAAT+TGG + chr7.2:12140159-12140178 MS.gene061892:intron 35.0%
AGTTATCAGAATTCCCATTC+GGG - chr7.2:12140660-12140679 None:intergenic 35.0%
ATAAAAGGTGACAACTGGAA+AGG - chr7.2:12139798-12139817 None:intergenic 35.0%
ATACCTATCACTCAAACTCT+TGG + chr7.2:12140785-12140804 MS.gene061892:CDS 35.0%
CAGTTATCAGAATTCCCATT+CGG - chr7.2:12140661-12140680 None:intergenic 35.0%
CATAATAATGATGATTGGGC+TGG + chr7.2:12140865-12140884 MS.gene061892:CDS 35.0%
CTCAAAGTCCAATTTCCATT+CGG - chr7.2:12140170-12140189 None:intergenic 35.0%
GATGGTGATAGTTATGGTTA+TGG + chr7.2:12138462-12138481 MS.gene061892:CDS 35.0%
GCCCAATCATCATTATTATG+AGG - chr7.2:12140865-12140884 None:intergenic 35.0%
GGTGATGTAATTGGATTTGT+TGG + chr7.2:12138525-12138544 MS.gene061892:CDS 35.0%
TAATCTTGAGTTTGGTTGGT+AGG + chr7.2:12139111-12139130 MS.gene061892:intron 35.0%
TACCTATCACTCAAACTCTT+GGG + chr7.2:12140786-12140805 MS.gene061892:CDS 35.0%
TAGAGATTCCGTATTGAGAA+AGG - chr7.2:12138242-12138261 None:intergenic 35.0%
TATTTATACGAGGACACAGT+TGG + chr7.2:12138590-12138609 MS.gene061892:CDS 35.0%
TGTCCTCGTATAAATATCCT+CGG - chr7.2:12138586-12138605 None:intergenic 35.0%
TTCTCAATACGGAATCTCTA+AGG + chr7.2:12138242-12138261 MS.gene061892:CDS 35.0%
! ACTTTGAGGAATGTTGTGAT+TGG + chr7.2:12140182-12140201 MS.gene061892:intron 35.0%
! AGCTTTTAGGCATAGGAATT+GGG + chr7.2:12140371-12140390 MS.gene061892:intron 35.0%
! CATTTTCTTGATCTGGAGAT+CGG - chr7.2:12138187-12138206 None:intergenic 35.0%
! CTTTGAGGAATGTTGTGATT+GGG + chr7.2:12140183-12140202 MS.gene061892:intron 35.0%
!! ATGAATCCATTGTAACGGAT+CGG - chr7.2:12138161-12138180 None:intergenic 35.0%
!! GTAATTGGATTTGTTGGAAG+TGG + chr7.2:12138531-12138550 MS.gene061892:CDS 35.0%
!! TTATCTGTCTGTTGTTTCTG+AGG + chr7.2:12138764-12138783 MS.gene061892:CDS 35.0%
!! TTTTCCTTTCAGGTAAAGGA+CGG + chr7.2:12140496-12140515 MS.gene061892:intron 35.0%
AAAAACATGAGGAACCGATC+GGG - chr7.2:12139304-12139323 None:intergenic 40.0%
AAAGGAACGTGTTGAGATTG+CGG - chr7.2:12138224-12138243 None:intergenic 40.0%
AAGCTGCTCAACAGTTAAGA+TGG - chr7.2:12139893-12139912 None:intergenic 40.0%
ACTCAAACTCTTGGGATGAT+TGG + chr7.2:12140794-12140813 MS.gene061892:CDS 40.0%
ACTCAGAAGACATCAGAGAT+TGG + chr7.2:12140559-12140578 MS.gene061892:CDS 40.0%
AGACATCAGAGATTGGACAA+AGG + chr7.2:12140566-12140585 MS.gene061892:CDS 40.0%
AGAGATTGGACAAAGGACAT+GGG + chr7.2:12140573-12140592 MS.gene061892:CDS 40.0%
AGGACATGGGGTATAATGAA+AGG + chr7.2:12140586-12140605 MS.gene061892:CDS 40.0%
ATCAAGAAAATGGAAGCAGG+CGG + chr7.2:12138195-12138214 MS.gene061892:CDS 40.0%
ATCCCAAGAGTTTGAGTGAT+AGG - chr7.2:12140791-12140810 None:intergenic 40.0%
ATTAGGAGGAATCAGAGTAC+TGG + chr7.2:12138504-12138523 MS.gene061892:CDS 40.0%
ATTCCCATTCGGGTAATCTT+TGG - chr7.2:12140650-12140669 None:intergenic 40.0%
ATTGGGACAACCAAGATACA+AGG + chr7.2:12140812-12140831 MS.gene061892:CDS 40.0%
CAAAAACATGAGGAACCGAT+CGG - chr7.2:12139305-12139324 None:intergenic 40.0%
CAACCAAACTCAAGATTACC+AGG - chr7.2:12139109-12139128 None:intergenic 40.0%
CAGATCAAGAAAATGGAAGC+AGG + chr7.2:12138192-12138211 MS.gene061892:CDS 40.0%
CATAATTAGAGCCTTGCTTG+AGG + chr7.2:12140104-12140123 MS.gene061892:intron 40.0%
CATGAAAACGCCGTAAGAAA+CGG - chr7.2:12138085-12138104 None:intergenic 40.0%
CGAATGGAAATTGGACTTTG+AGG + chr7.2:12140168-12140187 MS.gene061892:intron 40.0%
CGAATGGGAATTCTGATAAC+TGG + chr7.2:12140659-12140678 MS.gene061892:CDS 40.0%
CGATCTCCAGATCAAGAAAA+TGG + chr7.2:12138185-12138204 MS.gene061892:CDS 40.0%
CTAGCATTCTCCTTAACAAC+AGG - chr7.2:12138363-12138382 None:intergenic 40.0%
CTCAAACTCTTGGGATGATT+GGG + chr7.2:12140795-12140814 MS.gene061892:CDS 40.0%
CTGGTAATCTTGAGTTTGGT+TGG + chr7.2:12139107-12139126 MS.gene061892:intron 40.0%
GACATGGGGTATAATGAAAG+GGG + chr7.2:12140588-12140607 MS.gene061892:CDS 40.0%
GGACATGGGGTATAATGAAA+GGG + chr7.2:12140587-12140606 MS.gene061892:CDS 40.0%
GGACCATGAATCCATTGTAA+CGG - chr7.2:12138166-12138185 None:intergenic 40.0%
GGGAATTGGTAAATTGTCCA+TGG + chr7.2:12138899-12138918 MS.gene061892:intron 40.0%
GGTAATTAGATGTGCGTTGT+TGG + chr7.2:12140223-12140242 MS.gene061892:intron 40.0%
GTTCCGTTAGAGATTGAACT+CGG + chr7.2:12139159-12139178 MS.gene061892:intron 40.0%
GTTCTTCCTTCCTTGTATCT+TGG - chr7.2:12140825-12140844 None:intergenic 40.0%
TACCCGAGTTCAATCTCTAA+CGG - chr7.2:12139165-12139184 None:intergenic 40.0%
TACTAAAGAGATCACTGCCA+AGG + chr7.2:12138935-12138954 MS.gene061892:CDS 40.0%
TAGAGGACAATGAGGAACAA+AGG + chr7.2:12139497-12139516 MS.gene061892:intron 40.0%
TCACCAAAGATTACCCGAAT+GGG + chr7.2:12140644-12140663 MS.gene061892:CDS 40.0%
TCTTCTACTTCTACCAGAGA+AGG + chr7.2:12140736-12140755 MS.gene061892:CDS 40.0%
TGCTAATCTGGTCAATAGCT+GGG + chr7.2:12140021-12140040 MS.gene061892:intron 40.0%
TGCTCAACAGTTAAGATGGT+GGG - chr7.2:12139889-12139908 None:intergenic 40.0%
TGGTGGTTGGGATGATAATT+GGG + chr7.2:12138431-12138450 MS.gene061892:CDS 40.0%
TTCACCAAAGATTACCCGAA+TGG + chr7.2:12140643-12140662 MS.gene061892:CDS 40.0%
TTCCCAAAAGAATCCCCAAT+GGG + chr7.2:12138056-12138075 MS.gene061892:CDS 40.0%
TTCCGTTAGAGATTGAACTC+GGG + chr7.2:12139160-12139179 MS.gene061892:intron 40.0%
TTGGATTTGGATCTAGTCCT+GGG + chr7.2:12138712-12138731 MS.gene061892:CDS 40.0%
TTTCAGGAAGCTAAATGGCA+AGG - chr7.2:12140271-12140290 None:intergenic 40.0%
TTTGAGGATAGAGGACAATG+AGG + chr7.2:12139489-12139508 MS.gene061892:intron 40.0%
! CTCAAGCAAGGCTCTAATTA+TGG - chr7.2:12140106-12140125 None:intergenic 40.0%
! CTGCTTCCATTTTCTTGATC+TGG - chr7.2:12138194-12138213 None:intergenic 40.0%
! GAGCTTTTAGGCATAGGAAT+TGG + chr7.2:12140370-12140389 MS.gene061892:intron 40.0%
! GATCCGTTACAATGGATTCA+TGG + chr7.2:12138160-12138179 MS.gene061892:CDS 40.0%
! GCAGATCTTGTTTGAAGGTT+CGG - chr7.2:12138028-12138047 None:intergenic 40.0%
! TCTTGTTTGAAGGTTCGGAT+TGG - chr7.2:12138023-12138042 None:intergenic 40.0%
!! ATAATGATGATTGGGCTGGT+TGG + chr7.2:12140869-12140888 MS.gene061892:CDS 40.0%
!! CAGAGTACTGGTGATGTAAT+TGG + chr7.2:12138516-12138535 MS.gene061892:CDS 40.0%
!! GTTAAGATGGTGGGAATTTG+TGG - chr7.2:12139880-12139899 None:intergenic 40.0%
!! TAATGATGATTGGGCTGGTT+GGG + chr7.2:12140870-12140889 MS.gene061892:CDS 40.0%
!! TGGGTGTTGGATTTGCTAAA+TGG + chr7.2:12140202-12140221 MS.gene061892:intron 40.0%
!! TTAGTTTGTCCACCTGATGA+AGG - chr7.2:12140766-12140785 None:intergenic 40.0%
!!! AGGTTTTTTCGCGAAGAAGA+TGG + chr7.2:12138635-12138654 MS.gene061892:CDS 40.0%
!!! TTTTTTCGCGAAGAAGATGG+CGG + chr7.2:12138638-12138657 MS.gene061892:CDS 40.0%
AGAGAAGGACAACCTTCATC+AGG + chr7.2:12140751-12140770 MS.gene061892:CDS 45.0%
AGGAAGGAAGAACCAGCTAA+AGG + chr7.2:12140832-12140851 MS.gene061892:CDS 45.0%
AGTAGCAGATTGAGCAACCA+TGG - chr7.2:12138919-12138938 None:intergenic 45.0%
AGTTATGGTTATGGATCGCG+TGG + chr7.2:12138471-12138490 MS.gene061892:CDS 45.0%
CAGAGATTGGACAAAGGACA+TGG + chr7.2:12140572-12140591 MS.gene061892:CDS 45.0%
CGACCGAGGATATTTATACG+AGG + chr7.2:12138580-12138599 MS.gene061892:CDS 45.0%
CGCAAGAGCAACACATGTTT+CGG + chr7.2:12139276-12139295 MS.gene061892:intron 45.0%
CTGCTAATCTGGTCAATAGC+TGG + chr7.2:12140020-12140039 MS.gene061892:intron 45.0%
CTGCTCAACAGTTAAGATGG+TGG - chr7.2:12139890-12139909 None:intergenic 45.0%
GAGATTGGACAAAGGACATG+GGG + chr7.2:12140574-12140593 MS.gene061892:CDS 45.0%
GCATTCTCCTTAACAACAGG+TGG - chr7.2:12138360-12138379 None:intergenic 45.0%
GGAATGTTGTGATTGGGTGT+TGG + chr7.2:12140189-12140208 MS.gene061892:intron 45.0%
GGACAACCAAGATACAAGGA+AGG + chr7.2:12140816-12140835 MS.gene061892:CDS 45.0%
GGGTATAATGAAAGGGGTCA+TGG + chr7.2:12140594-12140613 MS.gene061892:CDS 45.0%
GTGGTGGTTGGGATGATAAT+TGG + chr7.2:12138430-12138449 MS.gene061892:CDS 45.0%
GTTCCCAAAAGAATCCCCAA+TGG + chr7.2:12138055-12138074 MS.gene061892:CDS 45.0%
GTTGGATTTGGATCTAGTCC+TGG + chr7.2:12138711-12138730 MS.gene061892:CDS 45.0%
TGAGGAGAAATCCTTTGAGC+AGG - chr7.2:12138738-12138757 None:intergenic 45.0%
TGATGAAGGTTGTCCTTCTC+TGG - chr7.2:12140752-12140771 None:intergenic 45.0%
TGGAAAAGGAAAGCCACTTC+TGG + chr7.2:12138392-12138411 MS.gene061892:CDS 45.0%
TTATACGAGGACACAGTTGG+AGG + chr7.2:12138593-12138612 MS.gene061892:CDS 45.0%
TTCATGTGTCTCGAATGCTC+CGG + chr7.2:12138099-12138118 MS.gene061892:CDS 45.0%
! AACTTTCAGAAGCATGCTGC+AGG - chr7.2:12139712-12139731 None:intergenic 45.0%
! AAGGTTCGGATTGGAGTTCA+CGG - chr7.2:12138014-12138033 None:intergenic 45.0%
! GAACTCCTCAACCTTTTGAG+AGG - chr7.2:12140626-12140645 None:intergenic 45.0%
! GGTGGGAAGTATGTTGGATT+TGG + chr7.2:12138699-12138718 MS.gene061892:CDS 45.0%
! TCGACGCAGATCTTGTTTGA+AGG - chr7.2:12138033-12138052 None:intergenic 45.0%
! TCTGGTCAATAGCTGGGTTT+TGG + chr7.2:12140027-12140046 MS.gene061892:intron 45.0%
! TTTGGTCATAATGGGACGTC+AGG + chr7.2:12140934-12140953 MS.gene061892:CDS 45.0%
AATGAAAGGGGTCATGGCGT+TGG + chr7.2:12140600-12140619 MS.gene061892:CDS 50.0%
ACCACCGTCCTTTACCTGAA+AGG - chr7.2:12140503-12140522 None:intergenic 50.0%
AGCCTTGCTTGAGGTGAACT+AGG + chr7.2:12140113-12140132 MS.gene061892:intron 50.0%
CAATGGGCCTCCGTTTCTTA+CGG + chr7.2:12138072-12138091 MS.gene061892:CDS 50.0%
CACATGTTTCGGATCCCGAT+CGG + chr7.2:12139287-12139306 MS.gene061892:intron 50.0%
CAGGAAGCTAAATGGCAAGG+CGG - chr7.2:12140268-12140287 None:intergenic 50.0%
CTTCGTCCGATCCGTTACAA+TGG + chr7.2:12138152-12138171 MS.gene061892:CDS 50.0%
GAAAACGCCGTAAGAAACGG+AGG - chr7.2:12138082-12138101 None:intergenic 50.0%
GAAGGACAACCTTCATCAGG+TGG + chr7.2:12140754-12140773 MS.gene061892:CDS 50.0%
GAGAATGCTAGTACTCGTGC+TGG + chr7.2:12138372-12138391 MS.gene061892:CDS 50.0%
GCCTTGCTTGAGGTGAACTA+GGG + chr7.2:12140114-12140133 MS.gene061892:intron 50.0%
GCGTGATCCACCTGTTGTTA+AGG + chr7.2:12138350-12138369 MS.gene061892:CDS 50.0%
GCTAGTACTCGTGCTGGAAA+AGG + chr7.2:12138378-12138397 MS.gene061892:CDS 50.0%
GCTTCTGCTGCGAATAAGGA+AGG + chr7.2:12138615-12138634 MS.gene061892:CDS 50.0%
GGACGGTGGTTATGATCACA+AGG + chr7.2:12140513-12140532 MS.gene061892:CDS 50.0%
GGCCCTGGTAATCTTGAGTT+TGG + chr7.2:12139103-12139122 MS.gene061892:intron 50.0%
GTAAGAAACGGAGGCCCATT+GGG - chr7.2:12138073-12138092 None:intergenic 50.0%
TAAGAAACGGAGGCCCATTG+GGG - chr7.2:12138072-12138091 None:intergenic 50.0%
TATGGTTATGGATCGCGTGG+TGG + chr7.2:12138474-12138493 MS.gene061892:CDS 50.0%
TCAGTTCAGGGCAAACCGAT+CGG - chr7.2:12139191-12139210 None:intergenic 50.0%
TCCCTAGTTCACCTCAAGCA+AGG - chr7.2:12140118-12140137 None:intergenic 50.0%
TGAACTCGGGTAATCCCGAT+CGG + chr7.2:12139173-12139192 MS.gene061892:intron 50.0%
TGAGGAGCTGATCCTTTAGC+TGG - chr7.2:12140847-12140866 None:intergenic 50.0%
! AGGCCCATTGGGGATTCTTT+TGG - chr7.2:12138062-12138081 None:intergenic 50.0%
! CATAATGGGACGTCAGGTTC+TGG + chr7.2:12140940-12140959 MS.gene061892:CDS 50.0%
! CGCGAGAGCAACACATGTTT+TGG + chr7.2:12139224-12139243 MS.gene061892:intron 50.0%
! GGCCCATTGGGGATTCTTTT+GGG - chr7.2:12138061-12138080 None:intergenic 50.0%
! GTTGGCCTCTCAAAAGGTTG+AGG + chr7.2:12140618-12140637 MS.gene061892:CDS 50.0%
! TCCTTTCAGGTAAAGGACGG+TGG + chr7.2:12140499-12140518 MS.gene061892:intron 50.0%
!! CATTGTAACGGATCGGACGA+AGG - chr7.2:12138154-12138173 None:intergenic 50.0%
!! GTGGTGGTGGTGATATTAGG+AGG + chr7.2:12138490-12138509 MS.gene061892:CDS 50.0%
!! TACGTCGAATGGTGGTGGTT+GGG + chr7.2:12138419-12138438 MS.gene061892:CDS 50.0%
ACATACTTCCCACCCTGCGA+CGG - chr7.2:12138693-12138712 None:intergenic 55.0%
CAGTTCAGGGCAAACCGATC+GGG - chr7.2:12139190-12139209 None:intergenic 55.0%
CGATCGCATTCAAGCGATCG+CGG + chr7.2:12138314-12138333 MS.gene061892:CDS 55.0%
CGATCGCTTGAATGCGATCG+CGG - chr7.2:12138314-12138333 None:intergenic 55.0%
CGTAAGAAACGGAGGCCCAT+TGG - chr7.2:12138074-12138093 None:intergenic 55.0%
GAAATCCTTTGAGCAGGCCC+AGG - chr7.2:12138732-12138751 None:intergenic 55.0%
GGAGGCTTCTGCTGCGAATA+AGG + chr7.2:12138611-12138630 MS.gene061892:CDS 55.0%
GGCGGAGAATGAATCGAGAC+CGG + chr7.2:12138656-12138675 MS.gene061892:CDS 55.0%
GTGGAGTTACACCTTCGTCC+AGG + chr7.2:12138550-12138569 MS.gene061892:CDS 55.0%
TTCGACGTAGCAGCCAGAAG+TGG - chr7.2:12138408-12138427 None:intergenic 55.0%
! ATCCTCGGTCGATTTCGACC+TGG - chr7.2:12138571-12138590 None:intergenic 55.0%
! CTTCTGGCTGCTACGTCGAA+TGG + chr7.2:12138408-12138427 MS.gene061892:CDS 55.0%
! GTCGATTTCGACCTGGACGA+AGG - chr7.2:12138564-12138583 None:intergenic 55.0%
! TCGCAGGGTGGGAAGTATGT+TGG + chr7.2:12138693-12138712 MS.gene061892:CDS 55.0%
!! CATGGCGTTGGCCTCTCAAA+AGG + chr7.2:12140612-12140631 MS.gene061892:CDS 55.0%
!! CGCGTGGTGGTGGTGATATT+AGG + chr7.2:12138487-12138506 MS.gene061892:CDS 55.0%
!! CTACGTCGAATGGTGGTGGT+TGG + chr7.2:12138418-12138437 MS.gene061892:CDS 55.0%
AGATGTGAACGCCGAGGCCA+CGG - chr7.2:12138131-12138150 None:intergenic 60.0%
CGAAGGAGATGTGAACGCCG+AGG - chr7.2:12138137-12138156 None:intergenic 60.0%
CGCATTCAAGCGATCGCGGA+AGG + chr7.2:12138318-12138337 MS.gene061892:CDS 60.0%
CTAGTCCTGGGCCTGCTCAA+AGG + chr7.2:12138724-12138743 MS.gene061892:CDS 60.0%
CTGGCTGCTACGTCGAATGG+TGG + chr7.2:12138411-12138430 MS.gene061892:CDS 60.0%
GAATGCTCCGGCAAACACCG+TGG + chr7.2:12138111-12138130 MS.gene061892:CDS 60.0%
GAGAGTCTTCCTCCGTCGCA+GGG + chr7.2:12138678-12138697 MS.gene061892:CDS 60.0%
GCTGCTACGTCGAATGGTGG+TGG + chr7.2:12138414-12138433 MS.gene061892:CDS 60.0%
GGTTATGGATCGCGTGGTGG+TGG + chr7.2:12138477-12138496 MS.gene061892:CDS 60.0%
GTATACCCCCTCCAGACCCT+GGG + chr7.2:12139075-12139094 MS.gene061892:intron 60.0%
GTCCAGGTCGAAATCGACCG+AGG + chr7.2:12138566-12138585 MS.gene061892:CDS 60.0%
TATACCCCCTCCAGACCCTG+GGG + chr7.2:12139076-12139095 MS.gene061892:intron 60.0%
TGCGACGGAGGAAGACTCTC+CGG - chr7.2:12138678-12138697 None:intergenic 60.0%
TGTATACCCCCTCCAGACCC+TGG + chr7.2:12139074-12139093 MS.gene061892:intron 60.0%
! ACGTCAGGTTCTGGCTGGAC+AGG + chr7.2:12140949-12140968 MS.gene061892:CDS 60.0%
! ATGGGACGTCAGGTTCTGGC+TGG + chr7.2:12140944-12140963 MS.gene061892:CDS 60.0%
! TCAGGTTCTGGCTGGACAGG+AGG + chr7.2:12140952-12140971 MS.gene061892:CDS 60.0%
AGTCTTCCTCCGTCGCAGGG+TGG + chr7.2:12138681-12138700 MS.gene061892:CDS 65.0%
ATTACCAGGGCCCCTTCCCC+AGG - chr7.2:12139095-12139114 None:intergenic 65.0%
CGATCGCGGAAGGTCGTTCG+TGG + chr7.2:12138328-12138347 MS.gene061892:CDS 65.0%
GGAGAGTCTTCCTCCGTCGC+AGG + chr7.2:12138677-12138696 MS.gene061892:CDS 65.0%
GTCTTCCTCCGTCGCAGGGT+GGG + chr7.2:12138682-12138701 MS.gene061892:CDS 65.0%
TACTTCCCACCCTGCGACGG+AGG - chr7.2:12138690-12138709 None:intergenic 65.0%
TCCGGCAAACACCGTGGCCT+CGG + chr7.2:12138117-12138136 MS.gene061892:CDS 65.0%
TTACCAGGGCCCCTTCCCCA+GGG - chr7.2:12139094-12139113 None:intergenic 65.0%
! GGTTCTGGCTGGACAGGAGG+AGG + chr7.2:12140955-12140974 MS.gene061892:CDS 65.0%
ACGGCAGCAGCAGCAGCAGC+AGG - chr7.2:12140063-12140082 None:intergenic 70.0%
CCCCTCCAGACCCTGGGGAA+GGG + chr7.2:12139081-12139100 MS.gene061892:intron 70.0%
CCCCTTCCCCAGGGTCTGGA+GGG - chr7.2:12139085-12139104 None:intergenic 70.0%
CCCTCCAGACCCTGGGGAAG+GGG + chr7.2:12139082-12139101 MS.gene061892:intron 70.0%
CCCTTCCCCAGGGTCTGGAG+GGG - chr7.2:12139084-12139103 None:intergenic 70.0%
CCTTCCCCAGGGTCTGGAGG+GGG - chr7.2:12139083-12139102 None:intergenic 70.0%
GCCGAGGCCACGGTGTTTGC+CGG - chr7.2:12138121-12138140 None:intergenic 70.0%
GCTGCTGCTGCTGCTGCCGT+TGG + chr7.2:12140063-12140082 MS.gene061892:intron 70.0%
AGACCCTGGGGAAGGGGCCC+TGG + chr7.2:12139088-12139107 MS.gene061892:intron 75.0%
AGGGCCCCTTCCCCAGGGTC+TGG - chr7.2:12139089-12139108 None:intergenic 75.0%
CCCCCTCCAGACCCTGGGGA+AGG + chr7.2:12139080-12139099 MS.gene061892:intron 75.0%
GCCCCTTCCCCAGGGTCTGG+AGG - chr7.2:12139086-12139105 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 12137991 12140987 12137991 ID=MS.gene061892
chr7.2 mRNA 12137991 12140987 12137991 ID=MS.gene061892.t1;Parent=MS.gene061892
chr7.2 exon 12137991 12138785 12137991 ID=MS.gene061892.t1.exon1;Parent=MS.gene061892.t1
chr7.2 CDS 12137991 12138785 12137991 ID=cds.MS.gene061892.t1;Parent=MS.gene061892.t1
chr7.2 exon 12138900 12138956 12138900 ID=MS.gene061892.t1.exon2;Parent=MS.gene061892.t1
chr7.2 CDS 12138900 12138956 12138900 ID=cds.MS.gene061892.t1;Parent=MS.gene061892.t1
chr7.2 exon 12140508 12140987 12140508 ID=MS.gene061892.t1.exon3;Parent=MS.gene061892.t1
chr7.2 CDS 12140508 12140987 12140508 ID=cds.MS.gene061892.t1;Parent=MS.gene061892.t1
Gene Sequence

>MS.gene061892

ATGGCGGCGACACGGCGGCTCCGTGAACTCCAATCCGAACCTTCAAACAAGATCTGCGTCGACTGTTCCCAAAAGAATCCCCAATGGGCCTCCGTTTCTTACGGCGTTTTCATGTGTCTCGAATGCTCCGGCAAACACCGTGGCCTCGGCGTTCACATCTCCTTCGTCCGATCCGTTACAATGGATTCATGGTCCGATCTCCAGATCAAGAAAATGGAAGCAGGCGGTAACCGCAATCTCAACACGTTCCTTTCTCAATACGGAATCTCTAAGGAAACTGATATCATCACCAAGTATAATTCAAATGCTGCTTCGGTCTACCGCGATCGCATTCAAGCGATCGCGGAAGGTCGTTCGTGGCGTGATCCACCTGTTGTTAAGGAGAATGCTAGTACTCGTGCTGGAAAAGGAAAGCCACTTCTGGCTGCTACGTCGAATGGTGGTGGTTGGGATGATAATTGGGATAATGATGATGGTGATAGTTATGGTTATGGATCGCGTGGTGGTGGTGATATTAGGAGGAATCAGAGTACTGGTGATGTAATTGGATTTGTTGGAAGTGGAGTTACACCTTCGTCCAGGTCGAAATCGACCGAGGATATTTATACGAGGACACAGTTGGAGGCTTCTGCTGCGAATAAGGAAGGTTTTTTCGCGAAGAAGATGGCGGAGAATGAATCGAGACCGGAGAGTCTTCCTCCGTCGCAGGGTGGGAAGTATGTTGGATTTGGATCTAGTCCTGGGCCTGCTCAAAGGATTTCTCCTCAGAATGATTATCTGTCTGTTGTTTCTGAGGTTATAGTTTGAATTCTGTTTTGTTTATAATTTGAATTCTGTTTTGTTTTCGTGTTTTATGGGAAATGGTTTATTGTTTGTTGAGATATGTTTCTATGTTTTGTTTGTTTTTAGGGAATTGGTAAATTGTCCATGGTTGCTCAATCTGCTACTAAAGAGATCACTGCCAAGGTAATTTGTATAATTAATGTATTCTTTGTGAATTGTGATCCTATTTTTTTCTATAAAAAGTGTTACATGTTTTGTGTTTTTTGTTTAGCTTGTCTCTAATTTGAATTTATACATATTTGTATACCCCCTCCAGACCCTGGGGAAGGGGCCCTGGTAATCTTGAGTTTGGTTGGTAGGTATGTAAAGTCTGATGTATGAATACGTTCCGTTAGAGATTGAACTCGGGTAATCCCGATCGGTTTGCCCTGAACTGAAGCTCATTAATAACGCGAGAGCAACACATGTTTTGGATATATTTTACCTTGAAGTTCATTAATAACGCAAGAGCAACACATGTTTCGGATCCCGATCGGTTCCTCATGTTTTTGCTGTTAATGTTGAGGTCTATTACAGTTTAACATAGTTTAGCTTTGAAGAAAGTCCCTCTATTATTTCTGTATTGTTCAACTAATTGGCGTATGAAGTGTGTCATGCGTGAATAAATTATTTAATGGAATGTAATTTCTATACCCCCTTCAAGTTTTTTCTTGATTTTGAGGATAGAGGACAATGAGGAACAAAGGCTGTACTGATTACTGTCTCAGTTATATTTAAGGAGAGCATAAACCAATTCTCAAACTCTTTAAGGTGGATTTTTTGCAAGTCTTTTGGCAATCTTATTGGTAATTGAATTTTATGTTTATGTTCGGTAACATATTTTGTAACATGTTTTAAGTTGTGAGATTAAATTATGTTAGCATCTTGAGAAAGGACCTGCAGCATGCTTCTGAAAGTTGAATACATATTTTATTAAAAACATGATTTTGTTCTTATATTTACGACATATATGAAATTAAATCCTTTCCAGTTGTCACCTTTTATCCTTTGTTTTAACTATGACTGAAAAGCAAGGATATATTTGTCACTAAAATACAAAATTTCCACAAATTCCCACCATCTTAACTGTTGAGCAGCTTTTGTTTGAAAGTTATTACTATTTATATATTGCTGTTTTGACTCAGTTTATAGTTGCACCATGTTTTAGATTTGAAAATGGAAAACTGTGTTGCCTAATATGATTTGTCTGCTAATCTGGTCAATAGCTGGGTTTTGGCTATTTGATGCCTGCTGCTGCTGCTGCTGCCGTTGGTTCTAGTAAATTTAGCACCATAATTAGAGCCTTGCTTGAGGTGAACTAGGGATGAAATTTGTGATGATAACTAAGATTTGACCGAATGGAAATTGGACTTTGAGGAATGTTGTGATTGGGTGTTGGATTTGCTAAATGGTAATTAGATGTGCGTTGTTGGAAATGATAAATAGCACTTTCCGCCTTGCCATTTAGCTTCCTGAAATCTTATTTTGTTGAGGGTTTTCACTTCTCGCACTATCATTCAACGTTATTTTTGTTCAGAGATGGATTAAGAAAATTTAGAGCTTTTAGGCATAGGAATTGGGCATATTTTGAAATCTCATTATATCGTATTTCTCCATTCATATGGAATTTCAATGCGTATCACGCTTCTTCTAGCAGTTATTCTTCGCCTGTTTGACTATATTTTTTCCTTTCAGGTAAAGGACGGTGGTTATGATCACAAGGTCAATGAAACTGTCAATATTGTCACTCAGAAGACATCAGAGATTGGACAAAGGACATGGGGTATAATGAAAGGGGTCATGGCGTTGGCCTCTCAAAAGGTTGAGGAGTTCACCAAAGATTACCCGAATGGGAATTCTGATAACTGGCCACAAAATGAAAATGATAGACATGATTTCAATCAAGAGAATAAAAGCTGGAATTCTTCTACTTCTACCAGAGAAGGACAACCTTCATCAGGTGGACAAACTAATACCTATCACTCAAACTCTTGGGATGATTGGGACAACCAAGATACAAGGAAGGAAGAACCAGCTAAAGGATCAGCTCCTCATAATAATGATGATTGGGCTGGTTGGGATGATGCCAAAGATGACGATGATGAATTTGATGATAAATCTTTTGGTCATAATGGGACGTCAGGTTCTGGCTGGACAGGAGGAGGCTTTCACTAA
Protein sequence

>MS.gene061892.t1

MAATRRLRELQSEPSNKICVDCSQKNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSWSDLQIKKMEAGGNRNLNTFLSQYGISKETDIITKYNSNAASVYRDRIQAIAEGRSWRDPPVVKENASTRAGKGKPLLAATSNGGGWDDNWDNDDGDSYGYGSRGGGDIRRNQSTGDVIGFVGSGVTPSSRSKSTEDIYTRTQLEASAANKEGFFAKKMAENESRPESLPPSQGGKYVGFGSSPGPAQRISPQNDYLSVVSEGIGKLSMVAQSATKEITAKVKDGGYDHKVNETVNIVTQKTSEIGQRTWGIMKGVMALASQKVEEFTKDYPNGNSDNWPQNENDRHDFNQENKSWNSSTSTREGQPSSGGQTNTYHSNSWDDWDNQDTRKEEPAKGSAPHNNDDWAGWDDAKDDDDEFDDKSFGHNGTSGSGWTGGGFH