AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene062128

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062128.t1 MTR_2g043980 94.930 355 18 0 1 355 7 361 0.0 688
MS.gene062128.t1 MTR_2g043990 87.629 291 14 1 1 291 69 337 0.0 506
MS.gene062128.t1 MTR_0029s0050 61.602 362 129 6 1 355 1 359 4.71e-153 435
MS.gene062128.t1 MTR_3g448360 60.054 373 129 6 1 355 1 371 3.69e-152 433
MS.gene062128.t1 MTR_2g079090 61.050 362 131 6 1 355 1 359 2.90e-151 430
MS.gene062128.t1 MTR_0029s0100 61.326 362 130 6 1 355 1 359 3.49e-151 430
MS.gene062128.t1 MTR_2g079080 61.050 362 131 6 1 355 1 359 2.10e-150 428
MS.gene062128.t1 MTR_3g069780 58.667 375 131 7 1 355 1 371 4.40e-147 420
MS.gene062128.t1 MTR_3g438030 58.667 375 131 7 1 355 1 371 1.30e-146 419
MS.gene062128.t1 MTR_3g463960 57.990 388 125 9 3 355 4 388 9.96e-146 417
MS.gene062128.t1 MTR_3g463950 57.990 388 125 9 3 355 4 388 9.96e-146 417
MS.gene062128.t1 MTR_3g463970 57.990 388 125 9 3 355 4 388 9.96e-146 417
MS.gene062128.t1 MTR_3g463940 57.990 388 125 9 3 355 4 388 9.96e-146 417
MS.gene062128.t1 MTR_3g069520 58.177 373 134 7 1 355 1 369 1.22e-143 411
MS.gene062128.t1 MTR_3g463930 56.566 396 125 11 3 355 4 395 8.28e-140 402
MS.gene062128.t1 MTR_2g015650 49.062 373 166 7 3 355 6 374 1.01e-113 335
MS.gene062128.t1 MTR_2g015670 46.648 358 153 8 18 355 21 360 1.58e-99 298
MS.gene062128.t1 MTR_2g015630 46.018 339 153 7 33 347 36 368 9.29e-91 277
MS.gene062128.t1 MTR_2g015590 44.118 340 167 6 26 345 29 365 7.94e-86 264
MS.gene062128.t1 MTR_2g015580 44.023 343 162 8 26 345 45 380 8.55e-85 262
MS.gene062128.t1 MTR_2g015590 43.956 273 145 3 26 292 29 299 8.40e-66 211
MS.gene062128.t1 MTR_4g104240 34.493 345 193 9 25 347 36 369 1.43e-63 207
MS.gene062128.t1 MTR_7g087190 32.804 378 209 11 4 347 19 385 7.50e-53 179
MS.gene062128.t1 MTR_8g089805 34.426 366 190 11 18 347 30 381 1.37e-51 176
MS.gene062128.t1 MTR_8g028160 34.218 377 198 14 5 346 14 375 1.91e-49 170
MS.gene062128.t1 MTR_1g030220 33.149 362 195 10 19 347 31 378 6.20e-49 169
MS.gene062128.t1 MTR_7g033150 33.875 369 196 12 18 350 25 381 1.13e-48 168
MS.gene062128.t1 MTR_7g116870 32.812 384 209 13 1 353 7 372 3.08e-48 167
MS.gene062128.t1 MTR_7g111780 30.792 341 197 7 28 347 36 358 4.40e-47 164
MS.gene062128.t1 MTR_1g030340 32.461 382 202 14 4 347 18 381 5.41e-47 164
MS.gene062128.t1 MTR_1g030268 33.616 354 188 12 26 347 38 376 7.24e-47 164
MS.gene062128.t1 MTR_3g466240 40.094 212 92 3 99 305 2 183 6.21e-45 153
MS.gene062128.t1 MTR_1g030275 34.648 355 183 13 26 347 37 375 1.10e-44 158
MS.gene062128.t1 MTR_7g033165 33.521 355 186 11 26 345 31 370 1.14e-44 157
MS.gene062128.t1 MTR_7g113860 30.871 379 214 10 2 346 9 373 1.54e-44 157
MS.gene062128.t1 MTR_7g113860 32.703 370 193 13 15 346 16 367 2.33e-44 157
MS.gene062128.t1 MTR_3g466190 53.012 166 56 4 54 218 7 151 5.30e-44 151
MS.gene062128.t1 MTR_3g466190 57.692 78 20 1 291 355 152 229 2.89e-23 97.1
MS.gene062128.t1 MTR_1g030230 31.830 377 210 12 4 347 8 370 1.53e-42 152
MS.gene062128.t1 MTR_6g007090 31.186 388 204 14 1 347 7 372 4.72e-42 150
MS.gene062128.t1 MTR_7g033155 31.806 371 196 12 26 350 36 395 9.16e-42 150
MS.gene062128.t1 MTR_1g082390 31.053 380 204 13 4 347 12 369 3.15e-41 148
MS.gene062128.t1 MTR_6g007095 31.026 390 207 13 1 347 4 374 4.85e-40 150
MS.gene062128.t1 MTR_6g007095 29.338 317 178 9 55 347 396 690 9.78e-30 120
MS.gene062128.t1 MTR_8g038680 29.319 382 219 10 1 347 1 366 5.91e-38 139
MS.gene062128.t1 MTR_6g007100 30.649 385 196 16 1 347 4 355 2.63e-37 137
MS.gene062128.t1 MTR_1g030268 34.767 279 157 9 26 292 38 303 1.73e-35 132
MS.gene062128.t1 MTR_7g033165 35.424 271 146 9 26 280 31 288 3.31e-34 128
MS.gene062128.t1 MTR_1g025780 31.065 338 183 14 28 339 41 354 1.00e-32 125
MS.gene062128.t1 MTR_5g022630 30.084 359 199 14 3 330 14 351 3.61e-32 124
MS.gene062128.t1 MTR_8g089805 31.333 300 161 9 82 347 25 313 5.65e-32 122
MS.gene062128.t1 MTR_8g031390 29.118 340 196 11 24 340 31 348 2.61e-30 119
MS.gene062128.t1 MTR_7g111780 28.000 275 159 7 94 347 3 259 6.99e-30 115
MS.gene062128.t1 MTR_1g030265 30.619 307 161 12 77 347 53 343 2.93e-28 113
MS.gene062128.t1 MTR_8g031420 28.488 344 194 12 24 340 29 347 4.22e-28 113
MS.gene062128.t1 MTR_3g114120 32.132 333 177 14 28 334 47 356 1.52e-27 111
MS.gene062128.t1 MTR_1g025700 28.056 360 214 14 4 339 26 364 1.54e-27 111
MS.gene062128.t1 MTR_4g056160 30.267 337 190 14 28 338 27 344 3.04e-27 110
MS.gene062128.t1 MTR_8g014910 29.834 362 203 15 4 338 10 347 5.99e-27 109
MS.gene062128.t1 MTR_1g025760 29.834 362 206 14 4 339 56 395 1.01e-26 109
MS.gene062128.t1 MTR_8g031430 29.882 338 187 12 28 340 37 349 2.24e-26 108
MS.gene062128.t1 MTR_2g044100 28.286 350 203 13 21 343 36 364 4.34e-26 107
MS.gene062128.t1 MTR_7g113860 28.431 306 171 10 75 346 8 299 4.48e-26 106
MS.gene062128.t1 MTR_1g025720 28.291 357 205 14 4 331 9 343 5.13e-26 107
MS.gene062128.t1 MTR_5g022640 27.747 364 212 14 6 339 17 359 5.85e-26 107
MS.gene062128.t1 MTR_3g114090 30.409 342 192 14 23 339 31 351 1.00e-25 106
MS.gene062128.t1 MTR_2g100620 29.794 339 187 14 28 338 31 346 1.48e-25 105
MS.gene062128.t1 MTR_4g056280 28.412 359 210 13 6 338 7 344 2.11e-25 105
MS.gene062128.t1 MTR_2g033930 27.520 367 215 10 1 340 5 347 3.44e-25 105
MS.gene062128.t1 MTR_3g052490 28.453 362 211 12 6 341 12 351 8.91e-25 103
MS.gene062128.t1 MTR_5g078210 27.171 357 215 14 1 335 1 334 9.13e-25 103
MS.gene062128.t1 MTR_8g031390 29.592 294 176 10 24 308 31 302 1.33e-24 102
MS.gene062128.t1 MTR_1g025680 30.029 343 182 15 28 339 34 349 1.42e-24 104
MS.gene062128.t1 MTR_8g031400 30.058 346 186 13 24 340 31 349 2.17e-24 102
MS.gene062128.t1 MTR_8g079050 27.321 377 210 15 2 340 10 360 2.56e-24 102
MS.gene062128.t1 MTR_2g033920 30.178 338 193 13 27 340 34 352 3.28e-24 102
MS.gene062128.t1 MTR_8g012540 29.430 316 200 10 1 304 1 305 3.32e-24 102
MS.gene062128.t1 MTR_2g015080 27.747 364 207 15 3 333 16 356 4.65e-24 102
MS.gene062128.t1 MTR_8g022810 27.566 341 192 13 27 337 40 355 7.07e-24 101
MS.gene062128.t1 MTR_1g079540 27.548 363 217 13 3 340 6 347 8.94e-24 100
MS.gene062128.t1 MTR_4g122200 28.809 361 210 14 4 340 15 352 2.07e-23 100
MS.gene062128.t1 MTR_5g009100 27.976 336 202 13 30 343 48 365 2.73e-23 99.8
MS.gene062128.t1 MTR_3g098270 28.779 344 196 15 26 341 32 354 3.57e-23 99.8
MS.gene062128.t1 MTR_1g024890 29.155 343 193 12 25 340 29 348 3.81e-23 99.4
MS.gene062128.t1 MTR_4g019880 28.142 366 215 15 1 340 7 350 5.18e-23 99.0
MS.gene062128.t1 MTR_8g022790 29.483 329 196 11 28 340 37 345 1.26e-22 97.8
MS.gene062128.t1 MTR_8g075230 27.717 368 210 15 5 339 7 351 1.39e-22 97.4
MS.gene062128.t1 MTR_3g052580 27.174 368 205 15 7 341 9 346 1.46e-22 97.8
MS.gene062128.t1 MTR_3g052580 27.174 368 205 15 7 341 8 345 1.87e-22 97.8
MS.gene062128.t1 MTR_3g435540 27.606 355 206 13 30 351 25 361 1.89e-22 97.4
MS.gene062128.t1 MTR_5g084750 26.902 368 217 16 4 343 6 349 2.89e-22 96.7
MS.gene062128.t1 MTR_7g116510 28.926 363 210 17 2 340 4 342 4.03e-22 96.3
MS.gene062128.t1 MTR_4g108690 27.893 337 193 13 30 339 29 342 4.23e-22 96.3
MS.gene062128.t1 MTR_7g116520 28.571 364 211 14 1 340 12 350 7.26e-22 95.9
MS.gene062128.t1 MTR_3g052480 27.824 363 213 13 6 341 13 353 9.15e-22 95.5
MS.gene062128.t1 MTR_2g084585 28.107 338 193 14 28 338 30 344 5.38e-21 93.2
MS.gene062128.t1 MTR_5g084770 26.776 366 217 16 1 338 1 343 6.09e-21 92.8
MS.gene062128.t1 MTR_3g464730 25.946 370 217 15 1 339 1 344 7.70e-21 92.4
MS.gene062128.t1 MTR_3g005650 25.291 344 210 13 8 329 12 330 1.81e-20 91.7
MS.gene062128.t1 MTR_3g023220 28.000 350 192 16 8 329 8 325 1.98e-20 91.3
MS.gene062128.t1 MTR_5g074270 27.933 358 200 15 12 335 13 346 4.29e-20 90.5
MS.gene062128.t1 MTR_5g078210 26.437 348 213 13 1 335 1 318 5.18e-20 89.7
MS.gene062128.t1 MTR_4g087985 27.143 350 199 13 28 340 36 366 5.68e-20 90.1
MS.gene062128.t1 MTR_0565s0010 26.050 357 220 15 1 335 9 343 6.50e-20 90.1
MS.gene062128.t1 MTR_5g083040 26.235 324 206 13 28 330 32 343 6.62e-20 90.1
MS.gene062128.t1 MTR_7g116500 27.893 337 201 13 27 340 32 349 8.34e-20 89.7
MS.gene062128.t1 MTR_3g021460 25.833 360 236 10 1 347 1 342 8.71e-20 89.7
MS.gene062128.t1 MTR_3g082830 27.246 345 199 16 28 344 38 358 8.84e-20 89.7
MS.gene062128.t1 MTR_5g084790 27.457 346 197 15 28 344 32 352 1.80e-19 88.6
MS.gene062128.t1 MTR_1g025910 26.888 331 196 14 33 339 41 349 6.03e-19 87.4
MS.gene062128.t1 MTR_3g005660 27.879 330 197 14 30 335 38 350 7.64e-19 87.0
MS.gene062128.t1 MTR_8g087890 26.567 335 191 15 30 335 33 341 9.85e-19 86.7
MS.gene062128.t1 MTR_4g035353 25.549 364 223 15 3 341 8 348 1.52e-18 86.3
MS.gene062128.t1 MTR_5g093090 26.923 364 217 15 3 340 6 346 1.96e-18 85.9
MS.gene062128.t1 MTR_8g075220 26.630 368 213 16 7 339 15 360 1.97e-18 85.9
MS.gene062128.t1 MTR_7g116570 26.705 352 198 15 27 345 33 357 3.76e-18 85.1
MS.gene062128.t1 MTR_1g079530 27.114 343 190 16 27 340 28 339 7.61e-18 84.0
MS.gene062128.t1 MTR_1g060490 25.075 335 201 10 21 333 28 334 1.88e-17 82.8
MS.gene062128.t1 MTR_8g075200 26.757 370 205 17 7 339 16 356 6.69e-17 81.6
MS.gene062128.t1 MTR_2g461580 24.242 330 222 8 28 347 31 342 3.11e-16 79.3
MS.gene062128.t1 MTR_2g017965 26.344 372 201 17 1 334 1 337 3.70e-16 79.3
MS.gene062128.t1 MTR_6g021530 26.901 342 201 14 32 345 33 353 4.08e-16 79.0
MS.gene062128.t1 MTR_1g092750 25.970 335 181 13 29 333 41 338 4.79e-16 78.6
MS.gene062128.t1 MTR_1g060500 26.361 349 197 14 16 333 26 345 9.84e-16 77.8
MS.gene062128.t1 MTR_3g024510 24.176 364 219 15 1 335 13 348 1.67e-15 77.4
MS.gene062128.t1 MTR_2g033920 28.315 279 170 10 27 292 34 295 4.15e-15 75.5
MS.gene062128.t1 MTR_8g074560 26.031 388 222 17 3 354 6 364 1.91e-14 73.9
MS.gene062128.t1 MTR_5g087690 25.143 350 212 13 28 354 50 372 1.99e-13 71.2
MS.gene062128.t1 MTR_1g092740 24.776 335 196 12 29 337 39 343 2.80e-13 70.5
MS.gene062128.t1 MTR_2g017925 26.012 346 211 17 1 329 10 327 2.84e-13 70.5
MS.gene062128.t1 MTR_2g017955 24.022 358 214 16 1 328 1 330 3.52e-13 70.5
MS.gene062128.t1 MTR_7g008060 26.627 338 191 14 27 340 32 336 6.13e-13 69.3
MS.gene062128.t1 MTR_1g060520 23.324 343 179 10 16 333 26 309 8.46e-13 68.9
MS.gene062128.t1 MTR_8g074570 24.932 365 223 16 5 340 14 356 3.41e-12 67.4
MS.gene062128.t1 MTR_1108s0010 32.192 146 78 4 204 338 68 203 2.22e-11 63.2
MS.gene062128.t1 MTR_8g022810 30.097 206 116 8 27 218 40 231 4.86e-11 63.5
MS.gene062128.t1 MTR_1g092690 22.917 336 203 13 20 333 46 347 5.21e-11 63.5
MS.gene062128.t1 MTR_5g093090 26.144 306 189 13 3 292 6 290 7.85e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene062128.t1 AT5G45910 43.280 372 179 9 1 345 3 369 2.12e-92 281
MS.gene062128.t1 AT1G28570 43.149 343 168 9 26 346 32 369 1.50e-86 266
MS.gene062128.t1 AT1G31550 43.045 381 162 13 1 346 10 370 1.23e-85 264
MS.gene062128.t1 AT1G28610 41.803 366 187 10 1 345 4 364 6.93e-85 262
MS.gene062128.t1 AT1G28580 41.734 369 186 11 1 346 10 372 2.46e-84 261
MS.gene062128.t1 AT1G28590 42.667 375 166 12 9 348 13 373 4.76e-84 261
MS.gene062128.t1 AT1G28600 41.099 382 171 12 1 347 4 366 1.62e-82 256
MS.gene062128.t1 AT1G31550 42.257 381 162 13 1 346 10 367 3.67e-82 255
MS.gene062128.t1 AT2G27360 40.701 371 186 11 2 346 7 369 3.90e-81 253
MS.gene062128.t1 AT1G28650 40.054 372 179 12 3 345 15 371 2.32e-77 243
MS.gene062128.t1 AT1G28660 40.533 375 173 14 3 345 13 369 3.38e-76 239
MS.gene062128.t1 AT1G28660 40.533 375 172 15 3 345 13 368 1.98e-74 235
MS.gene062128.t1 AT1G28640 39.452 365 191 11 3 345 13 369 1.20e-73 233
MS.gene062128.t1 AT1G28670 39.178 365 193 11 3 345 13 370 3.87e-73 232
MS.gene062128.t1 AT1G28580 41.781 292 148 8 72 346 5 291 1.98e-67 215
MS.gene062128.t1 AT3G48460 34.006 347 194 9 23 345 33 368 1.37e-56 189
MS.gene062128.t1 AT5G03980 35.795 352 158 12 3 337 10 310 1.15e-53 179
MS.gene062128.t1 AT1G28570 42.723 213 102 6 151 346 88 297 1.61e-50 171
MS.gene062128.t1 AT4G01130 33.422 377 201 13 4 346 13 373 2.35e-50 172
MS.gene062128.t1 AT1G54790 32.368 380 209 9 1 346 5 370 8.24e-49 169
MS.gene062128.t1 AT1G28570 42.308 208 100 6 156 346 2 206 2.38e-48 163
MS.gene062128.t1 AT1G54790 31.854 383 210 11 1 346 1 369 4.05e-46 161
MS.gene062128.t1 AT5G14450 32.804 378 203 13 3 347 21 380 3.02e-45 159
MS.gene062128.t1 AT1G56670 29.651 344 198 8 28 346 40 364 5.37e-42 150
MS.gene062128.t1 AT1G54790 30.467 407 210 13 1 346 1 395 1.25e-41 150
MS.gene062128.t1 AT1G67830 31.667 360 190 12 19 337 21 365 2.47e-41 149
MS.gene062128.t1 AT3G05180 31.564 358 193 10 21 343 31 371 4.37e-41 148
MS.gene062128.t1 AT3G62280 30.383 339 196 7 29 345 37 357 9.46e-41 147
MS.gene062128.t1 AT3G26430 32.773 357 192 11 26 347 29 372 1.26e-40 147
MS.gene062128.t1 AT1G09390 28.919 370 216 10 3 346 13 361 2.27e-40 146
MS.gene062128.t1 AT4G01130 34.333 300 172 10 4 292 13 298 5.79e-38 139
MS.gene062128.t1 AT1G28610 38.208 212 123 5 1 206 4 213 5.62e-35 129
MS.gene062128.t1 AT1G28600 38.532 218 104 7 1 201 4 208 1.92e-34 126
MS.gene062128.t1 AT3G27950 30.105 382 202 13 4 347 10 364 1.74e-33 127
MS.gene062128.t1 AT1G71120 30.636 346 173 13 28 340 31 342 2.55e-32 124
MS.gene062128.t1 AT1G75880 31.351 370 199 16 4 339 20 368 7.77e-31 120
MS.gene062128.t1 AT1G23500 30.199 351 204 15 4 340 16 339 9.07e-31 120
MS.gene062128.t1 AT5G63170 29.651 344 206 14 1 330 1 322 1.52e-30 119
MS.gene062128.t1 AT1G56670 29.710 276 165 6 28 292 40 297 2.93e-30 117
MS.gene062128.t1 AT3G62280 30.403 273 163 6 29 292 37 291 1.80e-29 115
MS.gene062128.t1 AT1G75880 31.351 370 198 17 4 339 20 367 1.89e-29 117
MS.gene062128.t1 AT5G15720 29.204 339 195 14 22 334 23 342 3.39e-29 116
MS.gene062128.t1 AT1G75890 31.063 367 197 17 7 339 19 363 8.59e-29 115
MS.gene062128.t1 AT1G75890 31.063 367 197 17 7 339 48 392 1.54e-28 114
MS.gene062128.t1 AT5G08460 28.212 358 203 15 3 328 22 357 1.88e-28 114
MS.gene062128.t1 AT4G01130 29.530 298 166 10 82 346 1 287 3.37e-28 112
MS.gene062128.t1 AT1G75890 30.645 372 205 17 7 339 19 376 7.11e-28 112
MS.gene062128.t1 AT1G73610 28.804 368 202 17 1 339 1 337 8.98e-28 111
MS.gene062128.t1 AT3G14225 29.513 349 184 13 28 341 37 358 9.84e-27 109
MS.gene062128.t1 AT1G53940 31.487 343 185 12 28 341 39 360 1.85e-26 108
MS.gene062128.t1 AT1G20132 28.955 335 196 13 28 339 61 376 4.76e-26 107
MS.gene062128.t1 AT2G40250 28.228 333 201 13 25 334 33 350 6.38e-26 107
MS.gene062128.t1 AT5G42170 29.674 337 186 13 28 338 50 361 7.87e-26 107
MS.gene062128.t1 AT3G14225 29.799 349 187 14 28 341 37 362 2.29e-25 105
MS.gene062128.t1 AT1G59406 30.952 336 185 15 28 339 30 342 2.40e-25 105
MS.gene062128.t1 AT1G59030 30.952 336 185 15 28 339 30 342 2.40e-25 105
MS.gene062128.t1 AT1G58725 30.952 336 185 15 28 339 30 342 2.40e-25 105
MS.gene062128.t1 AT1G20120 29.446 343 197 14 26 342 76 399 3.33e-25 105
MS.gene062128.t1 AT1G53920 28.165 387 214 13 5 354 19 378 3.58e-25 105
MS.gene062128.t1 AT5G40990 29.532 342 193 12 28 341 37 358 6.12e-25 104
MS.gene062128.t1 AT3G14820 29.674 337 185 13 28 338 32 342 6.90e-25 103
MS.gene062128.t1 AT1G58520 30.909 330 186 14 28 339 30 335 3.54e-24 102
MS.gene062128.t1 AT1G58525 30.909 330 186 14 28 339 30 335 3.54e-24 102
MS.gene062128.t1 AT1G06990 27.128 376 213 15 4 342 5 356 3.74e-24 102
MS.gene062128.t1 AT1G20135 26.393 341 216 13 3 333 11 326 4.51e-24 101
MS.gene062128.t1 AT1G75900 29.080 337 190 13 28 338 43 356 8.50e-24 101
MS.gene062128.t1 AT1G75920 28.000 350 218 13 5 339 6 336 8.59e-24 100
MS.gene062128.t1 AT1G20130 27.035 344 198 14 28 339 184 506 9.10e-24 102
MS.gene062128.t1 AT5G03810 28.947 342 186 12 28 338 30 345 9.64e-24 100
MS.gene062128.t1 AT1G20130 27.035 344 198 14 28 339 204 526 1.06e-23 102
MS.gene062128.t1 AT3G04290 27.933 358 212 14 6 340 11 345 3.26e-23 99.4
MS.gene062128.t1 AT5G45950 28.182 330 191 13 28 335 40 345 3.56e-23 99.4
MS.gene062128.t1 AT5G03820 27.198 364 219 11 1 338 6 349 4.29e-23 99.0
MS.gene062128.t1 AT5G03820 27.198 364 219 11 1 338 34 377 8.92e-23 98.6
MS.gene062128.t1 AT4G28780 27.807 374 221 15 1 345 1 354 1.91e-22 97.4
MS.gene062128.t1 AT1G75930 29.483 329 196 15 26 338 27 335 2.55e-22 96.7
MS.gene062128.t1 AT1G29670 26.870 361 206 16 4 335 10 341 2.78e-22 97.1
MS.gene062128.t1 AT5G15720 28.571 287 172 12 22 292 23 292 4.61e-22 95.5
MS.gene062128.t1 AT3G16370 29.248 359 197 17 15 343 19 350 4.81e-22 95.9
MS.gene062128.t1 AT1G29670 26.870 361 206 16 4 335 78 409 5.49e-22 96.7
MS.gene062128.t1 AT5G22810 26.902 368 215 15 1 338 8 351 9.28e-22 95.5
MS.gene062128.t1 AT1G53990 29.223 373 202 16 3 341 5 349 1.21e-21 95.1
MS.gene062128.t1 AT5G15720 27.500 280 166 10 76 334 48 311 1.51e-21 94.4
MS.gene062128.t1 AT2G23540 27.378 347 195 14 28 340 48 371 2.00e-21 94.7
MS.gene062128.t1 AT4G10950 26.979 341 206 14 24 340 66 387 2.41e-21 94.7
MS.gene062128.t1 AT5G18430 28.412 359 211 15 9 340 7 346 3.58e-21 93.6
MS.gene062128.t1 AT2G03980 27.134 328 193 13 26 329 41 346 6.07e-21 93.2
MS.gene062128.t1 AT2G03980 27.134 328 193 13 26 329 41 346 6.07e-21 93.2
MS.gene062128.t1 AT2G03980 27.134 328 193 13 26 329 41 346 6.07e-21 93.2
MS.gene062128.t1 AT2G03980 27.134 328 193 13 26 329 41 346 6.07e-21 93.2
MS.gene062128.t1 AT1G74460 26.807 332 203 12 30 339 25 338 8.35e-21 92.8
MS.gene062128.t1 AT1G33811 27.576 330 202 14 29 335 35 350 1.13e-20 92.4
MS.gene062128.t1 AT5G41890 27.467 375 201 19 5 340 17 359 1.15e-20 92.4
MS.gene062128.t1 AT1G54020 27.119 354 203 16 1 334 9 327 2.12e-20 91.7
MS.gene062128.t1 AT1G75920 27.123 365 217 14 5 339 1 346 3.34e-20 90.9
MS.gene062128.t1 AT1G54030 28.659 328 175 15 27 333 51 340 4.65e-20 91.3
MS.gene062128.t1 AT1G71691 27.492 331 194 13 28 335 55 362 4.86e-20 90.9
MS.gene062128.t1 AT3G53100 26.426 333 205 13 28 338 29 343 9.58e-20 89.4
MS.gene062128.t1 AT5G45960 27.003 337 200 13 28 337 47 364 1.27e-19 89.4
MS.gene062128.t1 AT2G42990 28.440 327 184 16 28 327 28 331 1.68e-19 89.0
MS.gene062128.t1 AT2G30310 26.374 364 205 15 6 334 11 346 1.78e-19 89.0
MS.gene062128.t1 AT4G26790 26.706 337 205 11 26 339 27 344 4.89e-19 87.4
MS.gene062128.t1 AT4G26790 26.706 337 205 11 26 339 27 344 4.89e-19 87.4
MS.gene062128.t1 AT4G10950 26.686 341 203 15 24 340 66 383 8.10e-19 87.4
MS.gene062128.t1 AT1G29660 26.331 357 214 14 4 335 10 342 8.35e-19 87.0
MS.gene062128.t1 AT2G04570 27.446 368 208 18 3 342 10 346 1.11e-18 86.3
MS.gene062128.t1 AT1G71250 26.036 338 206 13 28 341 41 358 1.16e-18 86.7
MS.gene062128.t1 AT1G75920 28.374 289 176 11 63 339 39 308 1.21e-18 85.9
MS.gene062128.t1 AT3G43550 28.990 307 180 12 1 292 3 286 2.41e-18 84.7
MS.gene062128.t1 AT3G50400 25.333 375 217 14 3 340 10 358 3.23e-18 85.5
MS.gene062128.t1 AT1G75910 26.496 351 223 15 5 339 5 336 4.08e-18 84.7
MS.gene062128.t1 AT5G33370 27.978 361 212 15 4 340 10 346 4.27e-18 84.7
MS.gene062128.t1 AT5G03610 26.149 348 203 11 19 339 30 350 4.38e-18 84.7
MS.gene062128.t1 AT2G30220 26.761 355 208 16 6 331 11 342 5.21e-18 84.7
MS.gene062128.t1 AT3G09930 26.409 337 201 12 19 333 30 341 5.42e-18 84.3
MS.gene062128.t1 AT3G09930 26.409 337 201 12 19 333 30 341 5.42e-18 84.3
MS.gene062128.t1 AT3G43570 27.174 368 184 16 1 339 1 313 1.12e-17 83.2
MS.gene062128.t1 AT2G19010 26.113 337 199 13 30 345 32 339 1.37e-17 83.2
MS.gene062128.t1 AT2G19010 26.113 337 199 13 30 345 62 369 1.70e-17 83.2
MS.gene062128.t1 AT5G45670 24.225 355 214 14 4 329 6 334 3.31e-17 82.4
MS.gene062128.t1 AT5G55050 26.866 335 194 12 29 333 40 353 5.26e-17 81.6
MS.gene062128.t1 AT1G53940 31.295 278 159 9 28 292 39 297 6.16e-17 80.9
MS.gene062128.t1 AT2G31540 25.989 354 197 16 26 342 33 358 1.51e-15 77.4
MS.gene062128.t1 AT1G54000 23.810 357 220 14 3 337 12 338 1.63e-15 77.4
MS.gene062128.t1 AT1G54010 24.079 353 213 14 1 329 9 330 1.63e-15 77.4
MS.gene062128.t1 AT3G14210 25.816 337 199 11 24 337 32 340 2.06e-15 77.0
MS.gene062128.t1 AT4G18970 23.780 328 198 11 30 329 30 333 4.37e-15 76.3
MS.gene062128.t1 AT4G18970 23.780 328 198 11 30 329 30 333 4.63e-15 75.9
MS.gene062128.t1 AT1G71691 27.698 278 167 11 28 292 55 311 5.72e-15 75.1
MS.gene062128.t1 AT5G37690 23.780 328 208 13 32 337 31 338 1.48e-14 74.3
MS.gene062128.t1 AT1G58430 25.581 344 198 15 26 337 33 350 4.67e-14 72.8
MS.gene062128.t1 AT4G30140 26.176 340 193 11 30 345 35 340 4.71e-14 72.8
MS.gene062128.t1 AT2G19050 26.036 338 198 14 30 343 33 342 1.05e-13 71.6
MS.gene062128.t1 AT3G14220 23.919 347 211 15 10 334 16 331 2.60e-13 70.9
MS.gene062128.t1 AT2G19060 26.377 345 190 16 30 345 32 341 2.89e-13 70.5
MS.gene062128.t1 AT1G71691 25.704 284 167 12 73 335 1 261 2.51e-12 67.0
MS.gene062128.t1 AT1G54030 27.138 269 147 12 27 282 51 283 3.03e-11 64.3

Find 70 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTTCTAAATATATAAAT+TGG 0.129048 2.3:-45901261 MS.gene062128:CDS
GTTCTCTCTTAGTGTATTTA+TGG 0.133067 2.3:+45902111 None:intergenic
TGAATATCTTAATCCTCTTT+TGG 0.184478 2.3:-45903293 MS.gene062128:CDS
ACTTATTTCAAACAGCTTTC+AGG 0.227396 2.3:-45903126 MS.gene062128:CDS
ACTGAAAACTACGATGAATT+TGG 0.240545 2.3:-45902190 MS.gene062128:CDS
AAATATATTATCTTGACATT+AGG 0.260840 2.3:+45902085 None:intergenic
TCCCAATTTATATATTTAGA+AGG 0.288128 2.3:+45901259 None:intergenic
AATATATTATCTTGACATTA+GGG 0.326070 2.3:+45902086 None:intergenic
AGGGTGCGGTGCCTCCCTTC+TGG 0.327617 2.3:-45902239 MS.gene062128:CDS
GGAGTGAACTTTGCATTTGC+TGG 0.336376 2.3:-45902789 MS.gene062128:CDS
TTTCGTGACGTCTTGGCCTT+TGG 0.340861 2.3:+45902812 None:intergenic
TCCCTTCTGGCATTGGCGAC+TGG 0.345028 2.3:-45902226 MS.gene062128:CDS
GGGAGGCACCGCACCCTATT+GGG 0.354289 2.3:+45902245 None:intergenic
AGGGAGGCACCGCACCCTAT+TGG 0.362601 2.3:+45902244 None:intergenic
CCCAATGAGTAATTACTTGC+TGG 0.395496 2.3:+45902714 None:intergenic
AACTACCCACCGTATTGTTC+TGG 0.401721 2.3:+45902025 None:intergenic
CGGTGCCTCCCTTCTGGCAT+TGG 0.406051 2.3:-45902233 MS.gene062128:CDS
TCATTTGTAGCGGAGGCATA+TGG 0.407601 2.3:-45902867 MS.gene062128:intron
CGTTTGATCATAGATTTCAT+AGG 0.413108 2.3:-45903087 MS.gene062128:intron
GCCTATATGCTGCTTCTGTA+AGG 0.418654 2.3:+45901227 None:intergenic
GTGCCAGGGAACTTCCCAAT+AGG 0.420547 2.3:-45902259 MS.gene062128:CDS
CTGGCATTGGCGACTGGCTA+TGG 0.434389 2.3:-45902220 MS.gene062128:CDS
ATACTCCGCCATAGTATTGA+AGG 0.444608 2.3:+45902156 None:intergenic
ACCAGCAAGTAATTACTCAT+TGG 0.444773 2.3:-45902715 MS.gene062128:CDS
AAAGAGGATTAAGATATTCA+TGG 0.445712 2.3:+45903296 None:intergenic
AATAATTATCTCAATAAAAG+TGG 0.451241 2.3:-45902747 MS.gene062128:CDS
CCGCCAAGCAATAGTTCATA+TGG 0.451369 2.3:-45903153 MS.gene062128:CDS
TTGAAAGGAGCTGGCTTAAG+TGG 0.454936 2.3:+45901163 None:intergenic
AGCTTCATATGGAAGATGAT+TGG 0.457834 2.3:+45903233 None:intergenic
CCCTTCTAAATATATAAATT+GGG 0.458420 2.3:-45901260 MS.gene062128:CDS
TCACTCCTTTCGTGACGTCT+TGG 0.468137 2.3:+45902805 None:intergenic
TCGGAGCAAACAGAGTTGTT+AGG 0.469954 2.3:+45901283 None:intergenic
TGGTGCTTCGTATAAACGTT+TGG 0.474368 2.3:+45902045 None:intergenic
CCAGCAAGTAATTACTCATT+GGG 0.482449 2.3:-45902714 MS.gene062128:CDS
ATATGCTGCTTCTGTAAGGT+GGG 0.484524 2.3:+45901231 None:intergenic
TATATGCTGCTTCTGTAAGG+TGG 0.485674 2.3:+45901230 None:intergenic
AAGTTGAAAATAGCTTCATA+TGG 0.489466 2.3:+45903222 None:intergenic
ACCTTACAGAAGCAGCATAT+AGG 0.489949 2.3:-45901228 MS.gene062128:CDS
CACCCTATTGGGAAGTTCCC+TGG 0.505867 2.3:+45902256 None:intergenic
GAACCATATGAACTATTGCT+TGG 0.507617 2.3:+45903150 None:intergenic
GCTGTAGAGATAGTTGTGCC+AGG 0.508915 2.3:-45902274 MS.gene062128:CDS
TGCCAGGGAACTTCCCAATA+GGG 0.509591 2.3:-45902258 MS.gene062128:CDS
CCCAATTTATATATTTAGAA+GGG 0.510864 2.3:+45901260 None:intergenic
TCATCCTGTAAAAGAAAGAA+AGG 0.514260 2.3:-45902657 MS.gene062128:intron
TTAAGTGGAGGATTTGCAAA+AGG 0.515527 2.3:+45901178 None:intergenic
TACTAGACATTAATCAAAGA+AGG 0.523634 2.3:-45902298 MS.gene062128:intron
GCATATAGGCAAATAGCAAA+AGG 0.524981 2.3:-45901214 MS.gene062128:CDS
TCTAAATATATAAATTGGGA+TGG 0.538186 2.3:-45901256 MS.gene062128:CDS
ACACAAATGTGACCCAAAAG+AGG 0.544147 2.3:+45903280 None:intergenic
ATAGCAAAAGGACTAGTTGA+AGG 0.548149 2.3:-45901202 MS.gene062128:CDS
TTGGTGATAGTCTTATAAGC+TGG 0.557346 2.3:+45902831 None:intergenic
ATTATTATAATTAAGTGCAG+TGG 0.559806 2.3:+45902764 None:intergenic
ATTTATATATTTAGAAGGGT+CGG 0.560332 2.3:+45901264 None:intergenic
GTGATTGCATCAACCACTGA+GGG 0.567669 2.3:+45902429 None:intergenic
AGCCAGTCGCCAATGCCAGA+AGG 0.576626 2.3:+45902224 None:intergenic
AAAGGAGCTGGCTTAAGTGG+AGG 0.579527 2.3:+45901166 None:intergenic
GCCAGTCGCCAATGCCAGAA+GGG 0.593603 2.3:+45902225 None:intergenic
TATGCTGCTTCTGTAAGGTG+GGG 0.596122 2.3:+45901232 None:intergenic
TAGAAATGTTGTTCCCTCAG+TGG 0.597906 2.3:-45902442 MS.gene062128:CDS
TACGAAGCACCAGAACAATA+CGG 0.601683 2.3:-45902034 MS.gene062128:intron
GGGAACTTCCCAATAGGGTG+CGG 0.603170 2.3:-45902253 MS.gene062128:CDS
GGTGACTCAATTAGTGACAC+AGG 0.605738 2.3:-45903198 MS.gene062128:CDS
TAAAGCCTTCAATACTATGG+CGG 0.610165 2.3:-45902161 MS.gene062128:CDS
CTGTAGAGATAGTTGTGCCA+GGG 0.619777 2.3:-45902273 MS.gene062128:CDS
CCATATGAACTATTGCTTGG+CGG 0.623846 2.3:+45903153 None:intergenic
AAAGGCCAAGACGTCACGAA+AGG 0.632440 2.3:-45902810 MS.gene062128:CDS
AGTCGCCAATGCCAGAAGGG+AGG 0.634631 2.3:+45902228 None:intergenic
GCTTATAAGACTATCACCAA+AGG 0.687780 2.3:-45902828 MS.gene062128:CDS
AAAATTGTGTGAGATATGAG+AGG 0.692350 2.3:+45902473 None:intergenic
TGTGATTGCATCAACCACTG+AGG 0.696004 2.3:+45902428 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATAAGATTTTATATAATA+AGG - chr2.3:45902984-45903003 MS.gene062128:intron 10.0%
!!! TTTCATATACATTTAATTTT+TGG - chr2.3:45901407-45901426 MS.gene062128:intron 10.0%
!! AAATATATTATCTTGACATT+AGG + chr2.3:45902365-45902384 None:intergenic 15.0%
!! AATAATTATCTCAATAAAAG+TGG - chr2.3:45901700-45901719 MS.gene062128:intron 15.0%
!! AATATATTATCTTGACATTA+GGG + chr2.3:45902364-45902383 None:intergenic 15.0%
!! ACAAAAACAAAATATATAGT+TGG + chr2.3:45902118-45902137 None:intergenic 15.0%
!! ATATAATTAGTAATCACAAT+AGG + chr2.3:45902489-45902508 None:intergenic 15.0%
!! GTGATTACTAATTATATTAT+AGG - chr2.3:45902492-45902511 MS.gene062128:CDS 15.0%
!! GTTAATTAAATAAGTAGATA+TGG + chr2.3:45901821-45901840 None:intergenic 15.0%
!!! AATATTTTTATAAGTTGGTT+TGG + chr2.3:45902596-45902615 None:intergenic 15.0%
!!! TCTCTTTTATTTAAAGTTAT+TGG - chr2.3:45902744-45902763 MS.gene062128:CDS 15.0%
!! AAATATTCATTCATTTGTAG+CGG - chr2.3:45901570-45901589 MS.gene062128:intron 20.0%
!! ACCCTTCTAAATATATAAAT+TGG - chr2.3:45903186-45903205 MS.gene062128:CDS 20.0%
!! ATTATTATAATTAAGTGCAG+TGG + chr2.3:45901686-45901705 None:intergenic 20.0%
!! ATTTATATATTTAGAAGGGT+CGG + chr2.3:45903186-45903205 None:intergenic 20.0%
!! CAACAACATAATATTCTTAT+AGG - chr2.3:45902868-45902887 MS.gene062128:intron 20.0%
!! CCCAATTTATATATTTAGAA+GGG + chr2.3:45903190-45903209 None:intergenic 20.0%
!! CCCTTCTAAATATATAAATT+GGG - chr2.3:45903187-45903206 MS.gene062128:CDS 20.0%
!! CTATAAGAATATTATGTTGT+TGG + chr2.3:45902870-45902889 None:intergenic 20.0%
!! CTATATATAAAAGGAATACA+TGG + chr2.3:45902941-45902960 None:intergenic 20.0%
!! TCCCAATTTATATATTTAGA+AGG + chr2.3:45903191-45903210 None:intergenic 20.0%
!! TCTAAATATATAAATTGGGA+TGG - chr2.3:45903191-45903210 MS.gene062128:CDS 20.0%
!! TTATAGGTAAGCTTATTAAT+AGG - chr2.3:45902884-45902903 MS.gene062128:intron 20.0%
!! TTTGATTAATGTCTAGTATA+TGG + chr2.3:45902147-45902166 None:intergenic 20.0%
!!! AAAATTTTAAAAGCATGTTG+TGG - chr2.3:45903137-45903156 MS.gene062128:CDS 20.0%
!!! AAGTATAATTTAACTTACAG+TGG + chr2.3:45902052-45902071 None:intergenic 20.0%
!!! ACATTTGTGTATAGTTTTTT+AGG - chr2.3:45901180-45901199 MS.gene062128:CDS 20.0%
!!! ATTTTTTTACAACATGAAAG+TGG + chr2.3:45902778-45902797 None:intergenic 20.0%
!!! TTGTTTTTAATTCCATAACT+AGG - chr2.3:45901858-45901877 MS.gene062128:intron 20.0%
! AAGTTGAAAATAGCTTCATA+TGG + chr2.3:45901228-45901247 None:intergenic 25.0%
! ATAATAATGAGTTTGAACTG+GGG - chr2.3:45901469-45901488 MS.gene062128:intron 25.0%
! ATGAATGTGAAATTCAAGTA+TGG + chr2.3:45901451-45901470 None:intergenic 25.0%
! CAAACATTATTACCTAGTTA+TGG + chr2.3:45901873-45901892 None:intergenic 25.0%
! CATAATAATGAGTTTGAACT+GGG - chr2.3:45901468-45901487 MS.gene062128:intron 25.0%
! GTATGAATGATATAACAGTT+CGG - chr2.3:45902081-45902100 MS.gene062128:CDS 25.0%
! TACTAGACATTAATCAAAGA+AGG - chr2.3:45902149-45902168 MS.gene062128:CDS 25.0%
! TCATAATAATGAGTTTGAAC+TGG - chr2.3:45901467-45901486 MS.gene062128:intron 25.0%
!! AATACCTTTCTTTCTTTTAC+AGG + chr2.3:45901797-45901816 None:intergenic 25.0%
!! GAATATCTTAATCCTCTTTT+GGG - chr2.3:45901155-45901174 MS.gene062128:CDS 25.0%
!! TAAAAGGAATACATGGTTTT+AGG + chr2.3:45902934-45902953 None:intergenic 25.0%
!! TGAATATCTTAATCCTCTTT+TGG - chr2.3:45901154-45901173 MS.gene062128:CDS 25.0%
!!! AAGAAGTCACTATTTTTAGT+GGG - chr2.3:45901928-45901947 MS.gene062128:intron 25.0%
!!! TATGAAGCTATTTTCAACTT+TGG - chr2.3:45901228-45901247 MS.gene062128:CDS 25.0%
!!! TCAAGTACATTTTTTTATGC+AGG - chr2.3:45903101-45903120 MS.gene062128:CDS 25.0%
!!! TTTTAAAGCCTTCAATACTA+TGG - chr2.3:45902283-45902302 MS.gene062128:CDS 25.0%
AAAATTGTGTGAGATATGAG+AGG + chr2.3:45901977-45901996 None:intergenic 30.0%
ACTGAAAACTACGATGAATT+TGG - chr2.3:45902257-45902276 MS.gene062128:CDS 30.0%
ACTTATTTCAAACAGCTTTC+AGG - chr2.3:45901321-45901340 MS.gene062128:CDS 30.0%
CGTTTGATCATAGATTTCAT+AGG - chr2.3:45901360-45901379 MS.gene062128:intron 30.0%
GTTCTCTCTTAGTGTATTTA+TGG + chr2.3:45902339-45902358 None:intergenic 30.0%
TCATCCTGTAAAAGAAAGAA+AGG - chr2.3:45901790-45901809 MS.gene062128:intron 30.0%
TTTGAATAAACTACCTAACC+AGG + chr2.3:45903026-45903045 None:intergenic 30.0%
!! ATTTTAAAAGCATGTTGTGG+AGG - chr2.3:45903140-45903159 MS.gene062128:CDS 30.0%
!!! CAAGAAGTCACTATTTTTAG+TGG - chr2.3:45901927-45901946 MS.gene062128:intron 30.0%
!!! CTATTTTTAGTGGGAGAAAT+TGG - chr2.3:45901937-45901956 MS.gene062128:intron 30.0%
AATAAAAAGAGCGAACAGAC+AGG + chr2.3:45902680-45902699 None:intergenic 35.0%
ACCAGCAAGTAATTACTCAT+TGG - chr2.3:45901732-45901751 MS.gene062128:intron 35.0%
AGCTTCATATGGAAGATGAT+TGG + chr2.3:45901217-45901236 None:intergenic 35.0%
CCAGCAAGTAATTACTCATT+GGG - chr2.3:45901733-45901752 MS.gene062128:intron 35.0%
GAACCATATGAACTATTGCT+TGG + chr2.3:45901300-45901319 None:intergenic 35.0%
GCATATAGGCAAATAGCAAA+AGG - chr2.3:45903233-45903252 MS.gene062128:CDS 35.0%
GCTTATAAGACTATCACCAA+AGG - chr2.3:45901619-45901638 MS.gene062128:intron 35.0%
GTCTTATAAGCTGGCAAAAA+TGG + chr2.3:45901610-45901629 None:intergenic 35.0%
TAAAGCCTTCAATACTATGG+CGG - chr2.3:45902286-45902305 MS.gene062128:CDS 35.0%
TATTCATTCATTTGTAGCGG+AGG - chr2.3:45901573-45901592 MS.gene062128:intron 35.0%
TTAAGTGGAGGATTTGCAAA+AGG + chr2.3:45903272-45903291 None:intergenic 35.0%
!! ATAGCAAAAGGACTAGTTGA+AGG - chr2.3:45903245-45903264 MS.gene062128:CDS 35.0%
!! TAAGCTATTTTGAAAGGAGC+TGG + chr2.3:45903296-45903315 None:intergenic 35.0%
!! TTGGTGATAGTCTTATAAGC+TGG + chr2.3:45901619-45901638 None:intergenic 35.0%
!! TTTTTAGTGGGAGAAATTGG+TGG - chr2.3:45901940-45901959 MS.gene062128:intron 35.0%
ACACAAATGTGACCCAAAAG+AGG + chr2.3:45901170-45901189 None:intergenic 40.0%
ACCTTACAGAAGCAGCATAT+AGG - chr2.3:45903219-45903238 MS.gene062128:CDS 40.0%
CCATATGAACTATTGCTTGG+CGG + chr2.3:45901297-45901316 None:intergenic 40.0%
CCCAATGAGTAATTACTTGC+TGG + chr2.3:45901736-45901755 None:intergenic 40.0%
TAGAAATGTTGTTCCCTCAG+TGG - chr2.3:45902005-45902024 MS.gene062128:intron 40.0%
TATGCTACAATAGCCTGGTT+AGG - chr2.3:45903010-45903029 MS.gene062128:intron 40.0%
TGGTGCTTCGTATAAACGTT+TGG + chr2.3:45902405-45902424 None:intergenic 40.0%
! ATACTCCGCCATAGTATTGA+AGG + chr2.3:45902294-45902313 None:intergenic 40.0%
! ATATGCTGCTTCTGTAAGGT+GGG + chr2.3:45903219-45903238 None:intergenic 40.0%
! TACGAAGCACCAGAACAATA+CGG - chr2.3:45902413-45902432 MS.gene062128:intron 40.0%
! TATATGCTGCTTCTGTAAGG+TGG + chr2.3:45903220-45903239 None:intergenic 40.0%
!! CTTTCAGGACGTTTTTCAGA+TGG - chr2.3:45901336-45901355 MS.gene062128:intron 40.0%
AACTACCCACCGTATTGTTC+TGG + chr2.3:45902425-45902444 None:intergenic 45.0%
AAGCACCAGAACAATACGGT+GGG - chr2.3:45902417-45902436 MS.gene062128:CDS 45.0%
CCGCCAAGCAATAGTTCATA+TGG - chr2.3:45901294-45901313 MS.gene062128:CDS 45.0%
CTGTAGAGATAGTTGTGCCA+GGG - chr2.3:45902174-45902193 MS.gene062128:CDS 45.0%
GGAGTGAACTTTGCATTTGC+TGG - chr2.3:45901658-45901677 MS.gene062128:intron 45.0%
GGATGTATGCTACAATAGCC+TGG - chr2.3:45903005-45903024 MS.gene062128:intron 45.0%
GGTGACTCAATTAGTGACAC+AGG - chr2.3:45901249-45901268 MS.gene062128:CDS 45.0%
GTGATTGCATCAACCACTGA+GGG + chr2.3:45902021-45902040 None:intergenic 45.0%
TCGGAGCAAACAGAGTTGTT+AGG + chr2.3:45903167-45903186 None:intergenic 45.0%
TGTGATTGCATCAACCACTG+AGG + chr2.3:45902022-45902041 None:intergenic 45.0%
! GCCTATATGCTGCTTCTGTA+AGG + chr2.3:45903223-45903242 None:intergenic 45.0%
! TATGCTGCTTCTGTAAGGTG+GGG + chr2.3:45903218-45903237 None:intergenic 45.0%
! TCATTTGTAGCGGAGGCATA+TGG - chr2.3:45901580-45901599 MS.gene062128:intron 45.0%
! TTGAAAGGAGCTGGCTTAAG+TGG + chr2.3:45903287-45903306 None:intergenic 45.0%
!! TAATATATACTATATATAAA+AGG + chr2.3:45902950-45902969 None:intergenic 5.0%
!!! TATAAAATATTTTTATAAGT+TGG + chr2.3:45902601-45902620 None:intergenic 5.0%
AAAGGCCAAGACGTCACGAA+AGG - chr2.3:45901637-45901656 MS.gene062128:intron 50.0%
GCTGTAGAGATAGTTGTGCC+AGG - chr2.3:45902173-45902192 MS.gene062128:CDS 50.0%
TCACTCCTTTCGTGACGTCT+TGG + chr2.3:45901645-45901664 None:intergenic 50.0%
TGCCAGGGAACTTCCCAATA+GGG - chr2.3:45902189-45902208 MS.gene062128:CDS 50.0%
! AAAGGAGCTGGCTTAAGTGG+AGG + chr2.3:45903284-45903303 None:intergenic 50.0%
! GAAGCACCAGAACAATACGG+TGG - chr2.3:45902416-45902435 MS.gene062128:CDS 50.0%
! TTTCGTGACGTCTTGGCCTT+TGG + chr2.3:45901638-45901657 None:intergenic 50.0%
CACCCTATTGGGAAGTTCCC+TGG + chr2.3:45902194-45902213 None:intergenic 55.0%
GGGAACTTCCCAATAGGGTG+CGG - chr2.3:45902194-45902213 MS.gene062128:CDS 55.0%
GTGCCAGGGAACTTCCCAAT+AGG - chr2.3:45902188-45902207 MS.gene062128:CDS 55.0%
AGCCAGTCGCCAATGCCAGA+AGG + chr2.3:45902226-45902245 None:intergenic 60.0%
AGTCGCCAATGCCAGAAGGG+AGG + chr2.3:45902222-45902241 None:intergenic 60.0%
GCCAGTCGCCAATGCCAGAA+GGG + chr2.3:45902225-45902244 None:intergenic 60.0%
!! CTGGCATTGGCGACTGGCTA+TGG - chr2.3:45902227-45902246 MS.gene062128:CDS 60.0%
!! TCCCTTCTGGCATTGGCGAC+TGG - chr2.3:45902221-45902240 MS.gene062128:CDS 60.0%
CGGTGCCTCCCTTCTGGCAT+TGG - chr2.3:45902214-45902233 MS.gene062128:CDS 65.0%
!! AGGGAGGCACCGCACCCTAT+TGG + chr2.3:45902206-45902225 None:intergenic 65.0%
!! GGGAGGCACCGCACCCTATT+GGG + chr2.3:45902205-45902224 None:intergenic 65.0%
AGGGTGCGGTGCCTCCCTTC+TGG - chr2.3:45902208-45902227 MS.gene062128:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 45901153 45903316 45901153 ID=MS.gene062128
chr2.3 mRNA 45901153 45903316 45901153 ID=MS.gene062128.t1;Parent=MS.gene062128
chr2.3 exon 45903088 45903316 45903088 ID=MS.gene062128.t1.exon1;Parent=MS.gene062128.t1
chr2.3 CDS 45903088 45903316 45903088 ID=cds.MS.gene062128.t1;Parent=MS.gene062128.t1
chr2.3 exon 45902658 45902879 45902658 ID=MS.gene062128.t1.exon2;Parent=MS.gene062128.t1
chr2.3 CDS 45902658 45902879 45902658 ID=cds.MS.gene062128.t1;Parent=MS.gene062128.t1
chr2.3 exon 45902416 45902558 45902416 ID=MS.gene062128.t1.exon3;Parent=MS.gene062128.t1
chr2.3 CDS 45902416 45902558 45902416 ID=cds.MS.gene062128.t1;Parent=MS.gene062128.t1
chr2.3 exon 45902035 45902314 45902035 ID=MS.gene062128.t1.exon4;Parent=MS.gene062128.t1
chr2.3 CDS 45902035 45902314 45902035 ID=cds.MS.gene062128.t1;Parent=MS.gene062128.t1
chr2.3 exon 45901153 45901346 45901153 ID=MS.gene062128.t1.exon5;Parent=MS.gene062128.t1
chr2.3 CDS 45901153 45901346 45901153 ID=cds.MS.gene062128.t1;Parent=MS.gene062128.t1
Gene Sequence

>MS.gene062128

ATGAATATCTTAATCCTCTTTTGGGTCACATTTGTGTATAGTTTTTTAGGAGTTTCAAATTCCAATCATCTTCCATATGAAGCTATTTTCAACTTTGGTGACTCAATTAGTGACACAGGAAATCAAGCTTCTTTTTACACACCGCCAAGCAATAGTTCATATGGTTCAACTTATTTCAAACAGCTTTCAGGACGTTTTTCAGATGGACGTTTGATCATAGATTTCATAGGTATTTTACAGTTATATGAAAATCTTTTCATATACATTTAATTTTTGGAGAAAAATTCAAATATTTCCATACTTGAATTTCACATTCATAATAATGAGTTTGAACTGGGGTGTTAGAAAGTGTATTATTGATATTTTTTATTTAAATAAACTTAATAATCGCGCAATTTTAATTGAATAGACAGTAACAAATATTCATTCATTTGTAGCGGAGGCATATGGATTGCCATTTTTGCCAGCTTATAAGACTATCACCAAAGGCCAAGACGTCACGAAAGGAGTGAACTTTGCATTTGCTGGTTCCACTGCACTTAATTATAATAATTATCTCAATAAAAGTGGAATTCATGTACCAGCAAGTAATTACTCATTGGGTGTTCAACTTAAGTTGTTTAAAGAGTTTAGAAATTCATCCTGTAAAAGAAAGAAAGGTATTACCATATCTACTTATTTAATTAACGTCTCTTTCAAAATGTTTTGTTTTTAATTCCATAACTAGGTAATAATGTTTGTTACATTATATAATGTAGATTGTCGTAGCTACTTCAAGAAGTCACTATTTTTAGTGGGAGAAATTGGTGGAAATGATCTTTCCTCTCATATCTCACACAATTTTTCAAACTTTAGAAATGTTGTTCCCTCAGTGGTTGATGCAATCACAAAAGCTACCACTGTAAGTTAAATTATACTTGATAGAGACGTATGAATGATATAACAGTTCGGTGAGTAATTTACCAACTATATATTTTGTTTTTGTTTCTTTCCATATACTAGACATTAATCAAAGAAGGAGCTGTAGAGATAGTTGTGCCAGGGAACTTCCCAATAGGGTGCGGTGCCTCCCTTCTGGCATTGGCGACTGGCTATGGTAATAAGACTGAAAACTACGATGAATTTGGATGTTTTAAAGCCTTCAATACTATGGCGGAGTATTTCAACGACAAACTAATATATTCCATAAATACACTAAGAGAGAACTACCCTAATGTCAAGATAATATATTTTGACTACTACAATGCTGCCAAACGTTTATACGAAGCACCAGAACAATACGGTGGGTAGTTATTTATTTAACTTTTTACATTTTACATTGTTAGATGTACAACCTATTGTGATTACTAATTATATTATAGGTACATTTTCGCTTATCTTTTGACAAGCTTGTGATTGTGAGAGCTTATAGAAGCAGTGTATAACATGTGCATAAGCTCTCCAAACCAACTTATAAAAATATTTTATATAAAAATTATTTTAATTTGTTTAATCTATTACTAGCATTAAGACAAACGCTTTGTACCTGTCTGTTCGCTCTTTTTATTGCGCTAATGCGTATAAATTATGAATAATAGTTCTTATGACATTTTCTCTTTTATTTAAAGTTATTGGTAAATAATCCACTTTCATGTTGTAAAAAAATATACTCATCTTTTTCAATGACATCAACAATATAGCAAATACAGTATAATTCTTATATTTTTTATTGACACCAACAACATAATATTCTTATAGGTAAGCTTATTAATAGGTATAATTGAAAGCGAAAAAGTCATCCTAAAACCATGTATTCCTTTTATATATAGTATATATTATAGAAATAACTCATACATAAGATTTTATATAATAAGGATGTATGCTACAATAGCCTGGTTAGGTAGTTTATTCAAACAGAACGTAAGATTTACTTTTGTCTATTTCATTTATACATTTTCATTTATTTAATTCAAGTACATTTTTTTATGCAGGCTTTGATAAGAGTAAAATTTTAAAAGCATGTTGTGGAGGTCCTAACAACTCTGTTTGCTCCGACCCTTCTAAATATATAAATTGGGATGGACCCCACCTTACAGAAGCAGCATATAGGCAAATAGCAAAAGGACTAGTTGAAGGTCCTTTTGCAAATCCTCCACTTAAGCCAGCTCCTTTCAAAATAGCTTAA
Protein sequence

>MS.gene062128.t1

MNILILFWVTFVYSFLGVSNSNHLPYEAIFNFGDSISDTGNQASFYTPPSNSSYGSTYFKQLSGRFSDGRLIIDFIAEAYGLPFLPAYKTITKGQDVTKGVNFAFAGSTALNYNNYLNKSGIHVPASNYSLGVQLKLFKEFRNSSCKRKKDCRSYFKKSLFLVGEIGGNDLSSHISHNFSNFRNVVPSVVDAITKATTTLIKEGAVEIVVPGNFPIGCGASLLALATGYGNKTENYDEFGCFKAFNTMAEYFNDKLIYSINTLRENYPNVKIIYFDYYNAAKRLYEAPEQYGFDKSKILKACCGGPNNSVCSDPSKYINWDGPHLTEAAYRQIAKGLVEGPFANPPLKPAPFKIA