Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062153.t1 | XP_013468875.1 | 92.8 | 922 | 53 | 2 | 11 | 919 | 1 | 922 | 0.00E+00 | 1721.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062153.t1 | Q9ZSB5 | 61.2 | 933 | 307 | 11 | 11 | 917 | 1 | 904 | 0.0e+00 | 1112.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062153.t1 | A0A072VM85 | 92.8 | 922 | 53 | 2 | 11 | 919 | 1 | 922 | 0.0e+00 | 1721.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene057682 | MS.gene062153 | 0.834303 | 3.24E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 217 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACTCCCTTGGTTACTTATT+TGG | 0.167537 | 1.3:-30513090 | MS.gene062153:CDS |
AATTATATTAGGCTTCTATT+TGG | 0.193463 | 1.3:-30517215 | MS.gene062153:intron |
GTGGAAATTGCCAGAGATTT+TGG | 0.202696 | 1.3:-30512426 | MS.gene062153:CDS |
GAGCTAGTGTGCAAAGTTAA+AGG | 0.260338 | 1.3:-30517343 | MS.gene062153:CDS |
GTGAATTAGCACTTGCATTT+GGG | 0.290290 | 1.3:-30516279 | MS.gene062153:CDS |
TTGAGGAAACTTTGGTCCTC+TGG | 0.299288 | 1.3:-30516250 | MS.gene062153:CDS |
CTTCCTGAAGTTCACAAAAC+TGG | 0.302951 | 1.3:-30512696 | MS.gene062153:CDS |
GCTGATCGTTCCTCTCATTC+TGG | 0.315839 | 1.3:-30516770 | MS.gene062153:CDS |
GGAATCATTGACTTCAATAA+AGG | 0.321302 | 1.3:-30513995 | MS.gene062153:CDS |
TTTCCACAAGTCCAGTTTCT+TGG | 0.325981 | 1.3:+30512442 | None:intergenic |
ATGCAGTCCATCCAATAAAA+AGG | 0.328639 | 1.3:+30514809 | None:intergenic |
GGTGAATTAGCACTTGCATT+TGG | 0.331811 | 1.3:-30516280 | MS.gene062153:CDS |
TTAATTTCAGCTTCAGAAAC+AGG | 0.340496 | 1.3:+30512010 | None:intergenic |
AACGATGACGATTGCTGAAT+CGG | 0.342025 | 1.3:-30521747 | MS.gene062153:CDS |
TTGGAAGAAGACCCTCAATA+TGG | 0.349829 | 1.3:-30513071 | MS.gene062153:CDS |
AGCAACCATTACGGTGGTTT+AGG | 0.350370 | 1.3:-30512257 | MS.gene062153:CDS |
GAATAGCGCTCTTCAATGTT+TGG | 0.351618 | 1.3:-30516510 | MS.gene062153:CDS |
GAACTTCCCCATTCACAATC+TGG | 0.353781 | 1.3:-30512342 | MS.gene062153:CDS |
AAAACCCAGTGCACATATAA+AGG | 0.354307 | 1.3:-30512778 | MS.gene062153:CDS |
TGTTCTCTGGTGCAAAGTGC+CGG | 0.355262 | 1.3:+30512894 | None:intergenic |
AATTGTAAAATTAAGCAAAA+AGG | 0.364916 | 1.3:-30518126 | MS.gene062153:intron |
ATATAAAGGTCTTTGCTGAT+TGG | 0.366153 | 1.3:-30512764 | MS.gene062153:CDS |
ATTATATTAGGCTTCTATTT+GGG | 0.367380 | 1.3:-30517214 | MS.gene062153:intron |
ATCAACTTCCTTGGCAATGC+TGG | 0.378205 | 1.3:+30518233 | None:intergenic |
GTCTGTGTTCCTTGCATTGA+GGG | 0.381184 | 1.3:+30512471 | None:intergenic |
GCCAAGGAAGTTGATTTCTC+AGG | 0.383623 | 1.3:-30518225 | MS.gene062153:CDS |
GATGGAAGAAGCGACGTCTT+AGG | 0.385620 | 1.3:-30511936 | None:intergenic |
AAGTTCATCACTGACTACTA+TGG | 0.386122 | 1.3:-30516609 | MS.gene062153:CDS |
ACAAAGAAATAGCTTCTTGC+CGG | 0.386336 | 1.3:+30512655 | None:intergenic |
CAGACAAGCTACCAAGAAAC+TGG | 0.387149 | 1.3:-30512453 | MS.gene062153:CDS |
TGGTAATGATAAGTACATAA+AGG | 0.388653 | 1.3:+30514328 | None:intergenic |
GGTGGAGAGAGGAAGATCTT+TGG | 0.388726 | 1.3:-30513113 | MS.gene062153:CDS |
AGATCATCTGTATCAATTGC+AGG | 0.391184 | 1.3:-30516698 | MS.gene062153:CDS |
TGACGTGACTGTCATCAAAA+TGG | 0.395919 | 1.3:+30512035 | None:intergenic |
TCATTCTGGTGTGCATTCAA+TGG | 0.399599 | 1.3:-30516756 | MS.gene062153:CDS |
TATCACAGATGCCTTGTCAA+TGG | 0.404625 | 1.3:+30512800 | None:intergenic |
TGTTGCACCACGTGCGTTCA+AGG | 0.406091 | 1.3:-30516218 | MS.gene062153:CDS |
AGACAGTAATTGTCATTGTC+CGG | 0.406135 | 1.3:+30514288 | None:intergenic |
TCAATCACCTTTAGATTAAG+TGG | 0.406422 | 1.3:+30518170 | None:intergenic |
CAGAGATCTTTGCCAAGCAT+TGG | 0.409945 | 1.3:-30514202 | MS.gene062153:CDS |
GTGCAAAGTGCCGGGTTCCT+CGG | 0.410838 | 1.3:+30512903 | None:intergenic |
TTCTCTTCCTCCGGTGAAAT+CGG | 0.411393 | 1.3:+30521692 | None:intergenic |
AGAAATATTGCATCGACATC+TGG | 0.412333 | 1.3:-30513917 | MS.gene062153:CDS |
TCTCATGAAGGGAAGGAAAC+TGG | 0.414310 | 1.3:-30512981 | MS.gene062153:CDS |
ATTATATCAGAATTATCAAT+TGG | 0.417193 | 1.3:+30518699 | None:intergenic |
CACTGAATTGTGGAGCAAAT+CGG | 0.419702 | 1.3:+30516185 | None:intergenic |
AGTTTGCATTCTCCAATGTC+TGG | 0.419774 | 1.3:+30517148 | None:intergenic |
AATGGTTGCTGATTGCATAA+AGG | 0.420321 | 1.3:+30512270 | None:intergenic |
CAAGTTGGCAGAGGTATGTT+GGG | 0.420787 | 1.3:-30518812 | MS.gene062153:CDS |
ATCACAGATGCCTTGTCAAT+GGG | 0.425512 | 1.3:+30512801 | None:intergenic |
GAGTCCTTCATTTCAATGTA+AGG | 0.429050 | 1.3:+30514759 | None:intergenic |
AATTCTGATATAATTTCAAA+TGG | 0.429572 | 1.3:-30518690 | MS.gene062153:CDS |
TTTAGCAGGACTGCAGAACT+TGG | 0.431003 | 1.3:-30516549 | MS.gene062153:CDS |
GATGATCTTGGAGGTTCTAA+TGG | 0.431147 | 1.3:+30516713 | None:intergenic |
GGATGTCCCCTCTTGTTCTC+TGG | 0.432883 | 1.3:+30512881 | None:intergenic |
TCGGAGCTTAATTTGAAAGA+TGG | 0.434560 | 1.3:-30521641 | MS.gene062153:CDS |
GTTCTCTGGTGCAAAGTGCC+GGG | 0.438834 | 1.3:+30512895 | None:intergenic |
TATACTTTATTATTTCCAAT+AGG | 0.439148 | 1.3:-30521613 | MS.gene062153:intron |
AATGGTCACTCAAGTGGGTC+TGG | 0.439704 | 1.3:-30516659 | MS.gene062153:CDS |
AAGACGTCGCTTCTTCCATC+TGG | 0.440402 | 1.3:+30511939 | None:intergenic |
GGGACTTGTTGAGGAAACTT+TGG | 0.440723 | 1.3:-30516258 | MS.gene062153:CDS |
GGTAATGATAAGTACATAAA+GGG | 0.444185 | 1.3:+30514329 | None:intergenic |
ATCAACATGGAGAATCCTTT+AGG | 0.444926 | 1.3:-30516437 | MS.gene062153:CDS |
GCAGGCCATCAGAAGATTGC+TGG | 0.446316 | 1.3:+30518763 | None:intergenic |
CAATCTTACCACATGTCATC+TGG | 0.451523 | 1.3:+30512591 | None:intergenic |
ACGATCCGTTTCTCTTCCTC+CGG | 0.451906 | 1.3:+30521683 | None:intergenic |
GACATTGGAGAATGCAAACT+TGG | 0.453854 | 1.3:-30517145 | MS.gene062153:CDS |
ACTGAATTGTGGAGCAAATC+GGG | 0.454165 | 1.3:+30516186 | None:intergenic |
AAGGAAACTGGTTTCATCTC+AGG | 0.457552 | 1.3:-30512969 | MS.gene062153:CDS |
ATCAGAATTATCAATTGGAC+CGG | 0.457774 | 1.3:+30518704 | None:intergenic |
GCAATTGATACAGATGATCT+TGG | 0.458422 | 1.3:+30516701 | None:intergenic |
AGAGATCTTTGCCAAGCATT+GGG | 0.458789 | 1.3:-30514201 | MS.gene062153:CDS |
ACCTCAATGCTGTACTGCTT+CGG | 0.459105 | 1.3:+30518197 | None:intergenic |
ATCTGGTCCTAGAGGTTCTT+CGG | 0.459925 | 1.3:+30512608 | None:intergenic |
GGTCAAATCCAGATTGTGAA+TGG | 0.461365 | 1.3:+30512334 | None:intergenic |
CATTCTGGTGTGCATTCAAT+GGG | 0.461609 | 1.3:-30516755 | MS.gene062153:CDS |
GGTGAAAGAGGTGGTTTAGC+AGG | 0.462978 | 1.3:-30516563 | MS.gene062153:CDS |
TCAATGTTGGCTCCATATTG+AGG | 0.465522 | 1.3:+30513059 | None:intergenic |
CAAGTATGGGAAAGGCTGTT+GGG | 0.466815 | 1.3:-30518591 | MS.gene062153:CDS |
GTCAAATCCAGATTGTGAAT+GGG | 0.468661 | 1.3:+30512335 | None:intergenic |
CTTCGTTAGTTAAAACAAGT+TGG | 0.468962 | 1.3:+30512841 | None:intergenic |
GATAAATATGACGTCTATAG+TGG | 0.470173 | 1.3:-30516584 | MS.gene062153:CDS |
TCAAGTTGGCAGAGGTATGT+TGG | 0.470261 | 1.3:-30518813 | MS.gene062153:CDS |
AAAGACCTTTATATGTGCAC+TGG | 0.472356 | 1.3:+30512773 | None:intergenic |
TATGCAATCAGCAACCATTA+CGG | 0.474161 | 1.3:-30512266 | MS.gene062153:CDS |
TAAAGGTTATACACATAGGA+TGG | 0.475468 | 1.3:+30512287 | None:intergenic |
CAATGTTGGCTCCATATTGA+GGG | 0.480052 | 1.3:+30513060 | None:intergenic |
CGGAGCTTAATTTGAAAGAT+GGG | 0.480500 | 1.3:-30521640 | MS.gene062153:CDS |
GAAGATCTTTGGAACTCCCT+TGG | 0.482950 | 1.3:-30513102 | MS.gene062153:CDS |
CCCTGAGAAATCAACTTCCT+TGG | 0.487604 | 1.3:+30518224 | None:intergenic |
TATATGATGCAAGCTATTTG+AGG | 0.490281 | 1.3:-30512722 | MS.gene062153:CDS |
TGAGGAAACTTTGGTCCTCT+GGG | 0.491053 | 1.3:-30516249 | MS.gene062153:CDS |
GAAGGAGTTAATTAAGCAAT+CGG | 0.491093 | 1.3:-30521660 | MS.gene062153:CDS |
TGTCTGTGTTCCTTGCATTG+AGG | 0.491807 | 1.3:+30512470 | None:intergenic |
AGCATGCAGTGCCCAATGCT+TGG | 0.492001 | 1.3:+30514190 | None:intergenic |
TTGCATTTGGGGACTTGTTG+AGG | 0.494177 | 1.3:-30516267 | MS.gene062153:CDS |
CATTACGGTGGTTTAGGTGG+TGG | 0.494345 | 1.3:-30512251 | MS.gene062153:CDS |
CCAAGGAAGTTGATTTCTCA+GGG | 0.495656 | 1.3:-30518224 | MS.gene062153:CDS |
ACAAGTATGGGAAAGGCTGT+TGG | 0.500405 | 1.3:-30518592 | MS.gene062153:CDS |
TTAGCAGGACTGCAGAACTT+GGG | 0.500451 | 1.3:-30516548 | MS.gene062153:CDS |
CAACTCATCCCATTATCAAT+CGG | 0.501111 | 1.3:+30521719 | None:intergenic |
AAAGCCTTACATTGAAATGA+AGG | 0.501423 | 1.3:-30514763 | MS.gene062153:CDS |
CACTTCCTTCCACTGTCACC+CGG | 0.503998 | 1.3:-30514307 | MS.gene062153:CDS |
CTCGGATGGTAGGCCGGATG+AGG | 0.505210 | 1.3:-30514739 | MS.gene062153:CDS |
ATATGATGCAAGCTATTTGA+GGG | 0.506090 | 1.3:-30512721 | MS.gene062153:CDS |
TTTAGTTCCTCAACAAGTAT+GGG | 0.508258 | 1.3:-30518604 | MS.gene062153:CDS |
ATTGAAGTCAATGATTCCAA+TGG | 0.513982 | 1.3:+30514000 | None:intergenic |
ACGTGCGTTCAAGGGAAAGC+TGG | 0.515230 | 1.3:-30516209 | MS.gene062153:CDS |
CAAAGAAATAGCTTCTTGCC+GGG | 0.515685 | 1.3:+30512656 | None:intergenic |
GTCCATACACGCATTCCTAA+AGG | 0.518820 | 1.3:+30516422 | None:intergenic |
CAAATGGAAGTAATTGTGAC+GGG | 0.525856 | 1.3:-30518674 | MS.gene062153:CDS |
AATGGGAAATGAATTAGCAT+TGG | 0.527118 | 1.3:-30516738 | MS.gene062153:CDS |
AGTTGGAAGCGACGTCCAGA+TGG | 0.527287 | 1.3:-30511954 | MS.gene062153:CDS |
AACTAAGTCTCATGAAGGGA+AGG | 0.531234 | 1.3:-30512988 | MS.gene062153:CDS |
TTTAGATATTCATCGACCAT+TGG | 0.531240 | 1.3:-30518646 | MS.gene062153:CDS |
AGCCTTTCCCATACTTGTTG+AGG | 0.532585 | 1.3:+30518597 | None:intergenic |
ATTGATTGTTGATGAATGCC+AGG | 0.532873 | 1.3:-30514670 | MS.gene062153:intron |
GAAGGACTCGGATGGTAGGC+CGG | 0.535738 | 1.3:-30514745 | MS.gene062153:CDS |
AGTGAACAGTATCGGCATGC+AGG | 0.538726 | 1.3:+30518745 | None:intergenic |
GACATATGTACATAGAATGT+TGG | 0.539698 | 1.3:-30513036 | MS.gene062153:CDS |
ATTGTCCGGGTGACAGTGGA+AGG | 0.540739 | 1.3:+30514302 | None:intergenic |
GGTGTACCCACTTAATCTAA+AGG | 0.542422 | 1.3:-30518177 | MS.gene062153:CDS |
AACTAACTTGAGAATCATGC+TGG | 0.546603 | 1.3:+30516155 | None:intergenic |
AGCTTTCCCTTGAACGCACG+TGG | 0.549334 | 1.3:+30516211 | None:intergenic |
AAGTATGTGAAAAGTAAAGA+TGG | 0.549335 | 1.3:-30512311 | MS.gene062153:CDS |
GACGTCTATAGTGGTGAAAG+AGG | 0.550637 | 1.3:-30516575 | MS.gene062153:CDS |
GACAGTAATTGTCATTGTCC+GGG | 0.551707 | 1.3:+30514289 | None:intergenic |
AAGAGCGCTATTCATAAAGC+AGG | 0.553621 | 1.3:+30516520 | None:intergenic |
TCTTCAACTAAGTCTCATGA+AGG | 0.553689 | 1.3:-30512993 | MS.gene062153:CDS |
TTGTCTAATGGTCACTCAAG+TGG | 0.555942 | 1.3:-30516665 | MS.gene062153:CDS |
TCATTTGCGACTTCCTCATC+CGG | 0.556059 | 1.3:+30514726 | None:intergenic |
TGTTCACTGAACAGTGGGAA+GGG | 0.557069 | 1.3:-30513134 | MS.gene062153:intron |
TGAATTAGCACTTGCATTTG+GGG | 0.557302 | 1.3:-30516278 | MS.gene062153:CDS |
CACCACCTAAACCACCGTAA+TGG | 0.561137 | 1.3:+30512252 | None:intergenic |
TCGTTATCTAGATAATCCAT+TGG | 0.561503 | 1.3:-30514016 | MS.gene062153:CDS |
ATTACGGTGGTTTAGGTGGT+GGG | 0.561699 | 1.3:-30512250 | MS.gene062153:CDS |
ATCGACTCAAGAGTGGAGCC+AGG | 0.567147 | 1.3:-30513951 | MS.gene062153:CDS |
GATCATCTGTATCAATTGCA+GGG | 0.567157 | 1.3:-30516697 | MS.gene062153:CDS |
GAACAAAGAGTCATTGCTGA+CGG | 0.567578 | 1.3:-30517178 | MS.gene062153:CDS |
TGTCTAATGGTCACTCAAGT+GGG | 0.570423 | 1.3:-30516664 | MS.gene062153:CDS |
AAAGGATGAAGAACATATTG+TGG | 0.573464 | 1.3:-30513977 | MS.gene062153:CDS |
GAGTTGTGTGCCGATTTCAC+CGG | 0.573770 | 1.3:-30521702 | MS.gene062153:CDS |
AAGACCTTTATATGTGCACT+GGG | 0.573883 | 1.3:+30512774 | None:intergenic |
GAACAAGAGGGGACATCCTG+TGG | 0.574752 | 1.3:-30512876 | MS.gene062153:CDS |
TCAAATGGAAGTAATTGTGA+CGG | 0.574962 | 1.3:-30518675 | MS.gene062153:CDS |
TAGCAGGACTGCAGAACTTG+GGG | 0.576248 | 1.3:-30516547 | MS.gene062153:CDS |
TATGGGAAAGGCTGTTGGGA+TGG | 0.576501 | 1.3:-30518587 | MS.gene062153:intron |
AGGTATGTTGGGCATTGTGA+TGG | 0.577486 | 1.3:-30518801 | MS.gene062153:CDS |
AGGAAGTCGCAAATGAGTGT+TGG | 0.577729 | 1.3:-30514719 | MS.gene062153:CDS |
GTTGCACCACGTGCGTTCAA+GGG | 0.578428 | 1.3:-30516217 | MS.gene062153:CDS |
TATCTTCAAGTGAACAGTAT+CGG | 0.578627 | 1.3:+30518737 | None:intergenic |
ATTGATACAGATGATCTTGG+AGG | 0.579531 | 1.3:+30516704 | None:intergenic |
GGAGAATGCAAACTTGGCAA+TGG | 0.580595 | 1.3:-30517139 | MS.gene062153:CDS |
TAGTCTTTATCCTCTTCCAA+TGG | 0.580945 | 1.3:+30518630 | None:intergenic |
TATTCATCGACCATTGGAAG+AGG | 0.581116 | 1.3:-30518640 | MS.gene062153:CDS |
CGATTTGCTCCACAATTCAG+TGG | 0.583237 | 1.3:-30516184 | MS.gene062153:CDS |
ATGTACATATGTCTCAATGT+TGG | 0.584427 | 1.3:+30513046 | None:intergenic |
AACCATTACGGTGGTTTAGG+TGG | 0.584463 | 1.3:-30512254 | MS.gene062153:CDS |
TTTCACCGGAGGAAGAGAAA+CGG | 0.585574 | 1.3:-30521688 | MS.gene062153:CDS |
TTCCTCAACAAGTATGGGAA+AGG | 0.585591 | 1.3:-30518599 | MS.gene062153:CDS |
TTACATTGAAATGAAGGACT+CGG | 0.585855 | 1.3:-30514757 | MS.gene062153:CDS |
TAGCTGTGAGCCCATTGACA+AGG | 0.586420 | 1.3:-30512811 | MS.gene062153:CDS |
TGTCATTGTCCGGGTGACAG+TGG | 0.589052 | 1.3:+30514298 | None:intergenic |
GACGGCTTCAGACCAGACAT+TGG | 0.593889 | 1.3:-30517160 | MS.gene062153:CDS |
ATTCAGCAAGTGGTGGAGTG+TGG | 0.594255 | 1.3:+30516486 | None:intergenic |
TTGGAAAGATGACTCTCCAC+AGG | 0.597434 | 1.3:+30512860 | None:intergenic |
TAGGTACTGCCCTCAATGCA+AGG | 0.598022 | 1.3:-30512480 | MS.gene062153:CDS |
GGCTCCACTCTTGAGTCGAT+AGG | 0.599098 | 1.3:+30513954 | None:intergenic |
TTGTGTGCCGATTTCACCGG+AGG | 0.599322 | 1.3:-30521699 | MS.gene062153:CDS |
AAATGAAGGACTCGGATGGT+AGG | 0.599838 | 1.3:-30514749 | MS.gene062153:CDS |
TTCTTCCAAATAAGTAACCA+AGG | 0.600475 | 1.3:+30513085 | None:intergenic |
ACTGACCAGCAATCTTCTGA+TGG | 0.604191 | 1.3:-30518768 | MS.gene062153:CDS |
CTACCAAGAAACTGGACTTG+TGG | 0.605316 | 1.3:-30512445 | MS.gene062153:CDS |
ACTTTGCACCAGAGAACAAG+AGG | 0.606165 | 1.3:-30512889 | MS.gene062153:CDS |
GCATTACACTGCATATGCTA+AGG | 0.606988 | 1.3:-30512228 | MS.gene062153:intron |
AGTTGATTGATGATAATAAG+TGG | 0.607365 | 1.3:-30512060 | MS.gene062153:CDS |
TCACAGTGAACCGAGGAACC+CGG | 0.607659 | 1.3:-30512913 | MS.gene062153:CDS |
CAATCACCTTTAGATTAAGT+GGG | 0.608336 | 1.3:+30518171 | None:intergenic |
TGAATGCACACCAGAATGAG+AGG | 0.609087 | 1.3:+30516760 | None:intergenic |
AAAGGTTATACACATAGGAT+GGG | 0.610075 | 1.3:+30512288 | None:intergenic |
TTACAATTGTCTAGGTACAA+AGG | 0.610376 | 1.3:-30518260 | MS.gene062153:intron |
ATGTTCACTGAACAGTGGGA+AGG | 0.611843 | 1.3:-30513135 | MS.gene062153:intron |
CGGGTGACAGTGGAAGGAAG+TGG | 0.612301 | 1.3:+30514308 | None:intergenic |
TGCATAAAGGTTATACACAT+AGG | 0.622320 | 1.3:+30512283 | None:intergenic |
TCAAATCCAGATTGTGAATG+GGG | 0.623330 | 1.3:+30512336 | None:intergenic |
GTGGCCTATCGACTCAAGAG+TGG | 0.623354 | 1.3:-30513958 | MS.gene062153:CDS |
AAGGTGGACCAGCATTGCCA+AGG | 0.624449 | 1.3:-30518241 | MS.gene062153:CDS |
ACACTAGTTTGTCCTGAATG+TGG | 0.624818 | 1.3:-30514374 | MS.gene062153:CDS |
ACAGTGGGAAGGGTGGAGAG+AGG | 0.626561 | 1.3:-30513124 | MS.gene062153:intron |
CACATGTCATCTGGTCCTAG+AGG | 0.629509 | 1.3:+30512600 | None:intergenic |
GGAAGAGAAACGGATCGTGA+AGG | 0.630973 | 1.3:-30521678 | MS.gene062153:CDS |
CTTCAACTAAGTCTCATGAA+GGG | 0.631995 | 1.3:-30512992 | MS.gene062153:CDS |
ATCATCTGTATCAATTGCAG+GGG | 0.637469 | 1.3:-30516696 | MS.gene062153:CDS |
ACCGAAGCAGTACAGCATTG+AGG | 0.637486 | 1.3:-30518198 | MS.gene062153:CDS |
TGGTTATAACCACTGAATTG+TGG | 0.641543 | 1.3:+30516175 | None:intergenic |
GAAACTGGTTTCATCTCAGG+TGG | 0.641699 | 1.3:-30512966 | MS.gene062153:CDS |
TCACTGAACAGTGGGAAGGG+TGG | 0.648017 | 1.3:-30513131 | MS.gene062153:intron |
TCTTCCAAATAAGTAACCAA+GGG | 0.649627 | 1.3:+30513086 | None:intergenic |
CTCTAGGACCAGATGACATG+TGG | 0.653845 | 1.3:-30512599 | MS.gene062153:intron |
GTCTATAGTGGTGAAAGAGG+TGG | 0.657063 | 1.3:-30516572 | MS.gene062153:CDS |
ATTGAAATGAAGGACTCGGA+TGG | 0.658538 | 1.3:-30514753 | MS.gene062153:CDS |
TAAAGGAGTAGAACAGCACA+AGG | 0.658863 | 1.3:-30517326 | MS.gene062153:intron |
GCAATCAGCAACCATTACGG+TGG | 0.659658 | 1.3:-30512263 | MS.gene062153:CDS |
TAGCTCATAGAGTTCACTCA+AGG | 0.664124 | 1.3:+30517360 | None:intergenic |
CAATTGTCTAGGTACAAAGG+TGG | 0.670376 | 1.3:-30518257 | MS.gene062153:intron |
TCAGAATTATCAATTGGACC+GGG | 0.676607 | 1.3:+30518705 | None:intergenic |
TGCAACAGCAGTTCGCCCAG+AGG | 0.677930 | 1.3:+30516234 | None:intergenic |
CTAATTCTCACAGTGAACCG+AGG | 0.686154 | 1.3:-30512920 | MS.gene062153:CDS |
TTCTTGACCGAAGAACCTCT+AGG | 0.686595 | 1.3:-30512615 | MS.gene062153:CDS |
CTTTGCACCAGAGAACAAGA+GGG | 0.690692 | 1.3:-30512888 | MS.gene062153:CDS |
GAGTGACCATTAGACAAGGT+AGG | 0.713316 | 1.3:+30516671 | None:intergenic |
TTACAGCGATGAGATCAACA+TGG | 0.715649 | 1.3:-30516450 | MS.gene062153:CDS |
TCATCTGTATCAATTGCAGG+GGG | 0.722106 | 1.3:-30516695 | MS.gene062153:CDS |
GTGAATGGGGAAGTTCACAA+AGG | 0.723784 | 1.3:+30512349 | None:intergenic |
TTGAAGATAACTGATAGACC+CGG | 0.726861 | 1.3:-30518723 | MS.gene062153:CDS |
TTTGCACCAGAGAACAAGAG+GGG | 0.735618 | 1.3:-30512887 | MS.gene062153:CDS |
ACTTGAGTGACCATTAGACA+AGG | 0.740534 | 1.3:+30516667 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 30511937 | 30521797 | 30511937 | ID=MS.gene062153 |
chr1.3 | mRNA | 30511937 | 30521797 | 30511937 | ID=MS.gene062153.t1;Parent=MS.gene062153 |
chr1.3 | exon | 30521614 | 30521797 | 30521614 | ID=MS.gene062153.t1.exon1;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30521614 | 30521797 | 30521614 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
chr1.3 | exon | 30518588 | 30518842 | 30518588 | ID=MS.gene062153.t1.exon2;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30518588 | 30518842 | 30518588 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
chr1.3 | exon | 30518127 | 30518268 | 30518127 | ID=MS.gene062153.t1.exon3;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30518127 | 30518268 | 30518127 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
chr1.3 | exon | 30517327 | 30517386 | 30517327 | ID=MS.gene062153.t1.exon4;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30517327 | 30517386 | 30517327 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
chr1.3 | exon | 30517131 | 30517226 | 30517131 | ID=MS.gene062153.t1.exon5;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30517131 | 30517226 | 30517131 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
chr1.3 | exon | 30516430 | 30516816 | 30516430 | ID=MS.gene062153.t1.exon6;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30516430 | 30516816 | 30516430 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
chr1.3 | exon | 30516162 | 30516302 | 30516162 | ID=MS.gene062153.t1.exon7;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30516162 | 30516302 | 30516162 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
chr1.3 | exon | 30514671 | 30514841 | 30514671 | ID=MS.gene062153.t1.exon8;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30514671 | 30514841 | 30514671 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
chr1.3 | exon | 30514271 | 30514411 | 30514271 | ID=MS.gene062153.t1.exon9;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30514271 | 30514411 | 30514271 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
chr1.3 | exon | 30514155 | 30514235 | 30514155 | ID=MS.gene062153.t1.exon10;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30514155 | 30514235 | 30514155 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
chr1.3 | exon | 30513913 | 30514058 | 30513913 | ID=MS.gene062153.t1.exon11;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30513913 | 30514058 | 30513913 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
chr1.3 | exon | 30512600 | 30513142 | 30512600 | ID=MS.gene062153.t1.exon12;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30512600 | 30513142 | 30512600 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
chr1.3 | exon | 30512229 | 30512499 | 30512229 | ID=MS.gene062153.t1.exon13;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30512229 | 30512499 | 30512229 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
chr1.3 | exon | 30511937 | 30512080 | 30511937 | ID=MS.gene062153.t1.exon14;Parent=MS.gene062153.t1 |
chr1.3 | CDS | 30511937 | 30512080 | 30511937 | ID=cds.MS.gene062153.t1;Parent=MS.gene062153.t1 |
Gene Sequence |
Protein sequence |