Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062162.t1 | XP_013468866.1 | 99 | 680 | 7 | 0 | 7 | 686 | 1 | 680 | 0.00E+00 | 1357.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062162.t1 | Q6R3L0 | 73.3 | 636 | 167 | 1 | 51 | 686 | 41 | 673 | 1.1e-284 | 980.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062162.t1 | A0A072VND8 | 99.0 | 680 | 7 | 0 | 7 | 686 | 1 | 680 | 0.0e+00 | 1357.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059868 | MS.gene062162 | 0.800042 | 1.73E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 153 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCATGGCCGTACCGTTTC+TGG | 0.148320 | 1.2:-62773088 | MS.gene062162:CDS |
| CTCGCATTCTGCAATGCTTT+TGG | 0.175738 | 1.2:-62773594 | MS.gene062162:CDS |
| CATTGCTTGCAACTTTGTTT+TGG | 0.185014 | 1.2:-62773192 | MS.gene062162:CDS |
| AGAATGTTTGAGCTTGTTTA+AGG | 0.190142 | 1.2:+62773754 | None:intergenic |
| CTAAACATCAACATGGAATT+TGG | 0.220436 | 1.2:-62775911 | MS.gene062162:CDS |
| ATGGTTCCAGCAATTGCTTC+TGG | 0.222492 | 1.2:-62772979 | MS.gene062162:CDS |
| AACCATCAACTCTGCTTTCT+TGG | 0.226520 | 1.2:+62772996 | None:intergenic |
| CTTGGAGCTGTGCTCTCTTA+TGG | 0.235520 | 1.2:-62774136 | MS.gene062162:CDS |
| CAAGAGCAAGAACCATAAAA+AGG | 0.240574 | 1.2:-62773930 | MS.gene062162:CDS |
| GCAGCAGAGACATTCAAATT+TGG | 0.267639 | 1.2:+62775692 | None:intergenic |
| TTGATCGGCGTAAAGGAAAT+TGG | 0.270852 | 1.2:-62774096 | MS.gene062162:CDS |
| GAAGGGTTTATATGGTTATA+AGG | 0.272710 | 1.2:-62774044 | MS.gene062162:CDS |
| CCTGCATTTGGTTGGATGTC+TGG | 0.275545 | 1.2:-62775076 | MS.gene062162:CDS |
| AATTCCATGTTGATGTTTAG+TGG | 0.292963 | 1.2:+62775914 | None:intergenic |
| ACTAACATGAAGGGTTTATA+TGG | 0.306840 | 1.2:-62774052 | MS.gene062162:CDS |
| ACAGAAACATGGCAGTTATA+GGG | 0.308924 | 1.2:-62773242 | MS.gene062162:CDS |
| TCACACACAGGATGATAAAA+TGG | 0.314433 | 1.2:-62774578 | MS.gene062162:CDS |
| TTTGAACAGTTTCCAACCTT+TGG | 0.319448 | 1.2:-62774356 | MS.gene062162:CDS |
| CTGTCCAATGTTCATCAGAT+TGG | 0.320759 | 1.2:+62775810 | None:intergenic |
| ATTATTTCAGCTCCTATAAC+TGG | 0.321331 | 1.2:+62775833 | None:intergenic |
| TACAGAAACATGGCAGTTAT+AGG | 0.321915 | 1.2:-62773243 | MS.gene062162:CDS |
| CAACAAAGCAAACAACAAAA+AGG | 0.327369 | 1.2:+62775050 | None:intergenic |
| CTCCAAGAAAGCAGAGTTGA+TGG | 0.329189 | 1.2:-62772998 | MS.gene062162:CDS |
| CAACCTTTGGGTTGCAAGCT+TGG | 0.349895 | 1.2:-62774343 | MS.gene062162:CDS |
| ATTATATGCCATGTTTATAT+CGG | 0.361843 | 1.2:+62773560 | None:intergenic |
| ATAAACATGGCATATAATTA+CGG | 0.369510 | 1.2:-62773555 | MS.gene062162:CDS |
| GAGGAAAGGTTGCCAGTTAT+AGG | 0.369530 | 1.2:-62775845 | MS.gene062162:CDS |
| TTGAACAGTTTCCAACCTTT+GGG | 0.374259 | 1.2:-62774355 | MS.gene062162:CDS |
| TTTCTGTAAATTAGCGCATA+AGG | 0.374435 | 1.2:+62773258 | None:intergenic |
| GGTGTAGTGGCAGCACTTGT+TGG | 0.376653 | 1.2:-62773486 | MS.gene062162:CDS |
| TGGATCGGGGTGGTTGGATA+TGG | 0.377446 | 1.2:-62773711 | MS.gene062162:CDS |
| TTGGAACCATTCCTGTTGTA+AGG | 0.381075 | 1.2:+62775711 | None:intergenic |
| CATCAAATGCCTTGTAGAAC+AGG | 0.386991 | 1.2:+62773310 | None:intergenic |
| TTGCTTCTGGACTAATTTGC+GGG | 0.390184 | 1.2:-62772966 | MS.gene062162:CDS |
| GTGAACTTGTCTCTGCTCCT+TGG | 0.393687 | 1.2:-62774154 | MS.gene062162:CDS |
| GCATGTTTCCTCAGCTGAAA+TGG | 0.394853 | 1.2:-62773653 | MS.gene062162:CDS |
| CTATCAATTGCTCTAATCCT+TGG | 0.398456 | 1.2:-62774016 | MS.gene062162:CDS |
| CATATCTGTTGGGATTAAAC+AGG | 0.406006 | 1.2:-62775159 | MS.gene062162:CDS |
| TCTTATGGGGTTTCTTTAAG+TGG | 0.406690 | 1.2:-62774406 | MS.gene062162:CDS |
| AGAGCATTCCAATGTGGATC+GGG | 0.410494 | 1.2:-62773725 | MS.gene062162:CDS |
| GCAACAGCGGTTCTCATCAA+TGG | 0.410553 | 1.2:-62774604 | MS.gene062162:CDS |
| TGCTATAGCATTGCTGTTAG+CGG | 0.415612 | 1.2:-62775554 | MS.gene062162:intron |
| ACAAGCTCAAACATTCTTGA+AGG | 0.418237 | 1.2:-62773748 | MS.gene062162:CDS |
| TAAACATGGCATATAATTAC+GGG | 0.419343 | 1.2:-62773554 | MS.gene062162:CDS |
| TTGATGTTTAGTGGACTTGA+TGG | 0.419351 | 1.2:+62775923 | None:intergenic |
| GCAGTTAAAGAACCTGCATT+TGG | 0.420611 | 1.2:-62775088 | MS.gene062162:CDS |
| TTCTGTAAATTAGCGCATAA+GGG | 0.423993 | 1.2:+62773259 | None:intergenic |
| TGATATGTGCACAGGTAGTT+TGG | 0.424107 | 1.2:-62773046 | MS.gene062162:CDS |
| CAGGTTCTTTAACTGCGCTT+GGG | 0.424884 | 1.2:+62775095 | None:intergenic |
| GCAGGTTCTTTAACTGCGCT+TGG | 0.426747 | 1.2:+62775094 | None:intergenic |
| AACAGCACAAGTCTGAATAA+TGG | 0.434716 | 1.2:+62775580 | None:intergenic |
| GACAGTTGAAACTAGAATCT+TGG | 0.437254 | 1.2:+62773973 | None:intergenic |
| AGGATTTGCTTCATATCTGT+TGG | 0.442291 | 1.2:-62775170 | MS.gene062162:CDS |
| GCTTGTTTAAGGTCACCATT+TGG | 0.442681 | 1.2:+62773765 | None:intergenic |
| ATGGCAGTTATAGGGGTTCA+AGG | 0.442747 | 1.2:-62773234 | MS.gene062162:CDS |
| CAAGTAGTTGGCACTGCAAT+GGG | 0.442885 | 1.2:-62773360 | MS.gene062162:CDS |
| GGCCGTACCGTTTCTGGTAG+GGG | 0.452239 | 1.2:-62773082 | MS.gene062162:CDS |
| AGGAAGACATATGTGTTGTC+TGG | 0.456289 | 1.2:-62775139 | MS.gene062162:CDS |
| ACAGAACACATAACAATAAG+AGG | 0.457854 | 1.2:-62775791 | MS.gene062162:CDS |
| GGATTTGCTTCATATCTGTT+GGG | 0.460752 | 1.2:-62775169 | MS.gene062162:CDS |
| ATTCTAGTTTCAACTGTCCT+TGG | 0.462241 | 1.2:-62773968 | MS.gene062162:CDS |
| ATTGCACACGCACCTCTCCC+AGG | 0.462537 | 1.2:-62773398 | MS.gene062162:CDS |
| CCGCTTGTTGATCGGCGTAA+AGG | 0.468950 | 1.2:-62774103 | MS.gene062162:CDS |
| CCATTGCAGTGCCAACTACT+TGG | 0.469410 | 1.2:+62773361 | None:intergenic |
| TATTTCAGGAAGCAAGTACA+TGG | 0.472341 | 1.2:-62774455 | MS.gene062162:intron |
| TTATGTATCCGCTTGTTGAT+CGG | 0.475175 | 1.2:-62774111 | MS.gene062162:CDS |
| GTTGCAAAACCACTTGGATA+AGG | 0.475631 | 1.2:+62774622 | None:intergenic |
| TTGGCATACGAACATCGCCC+TGG | 0.477283 | 1.2:+62773380 | None:intergenic |
| ATTAGTCCAGAAGCAATTGC+TGG | 0.479004 | 1.2:+62772973 | None:intergenic |
| GTGTAGTGGCAGCACTTGTT+GGG | 0.479516 | 1.2:-62773485 | MS.gene062162:CDS |
| TGTCTTAATTCCACTCAGAA+AGG | 0.483712 | 1.2:-62775020 | MS.gene062162:intron |
| ATTGCTTCTGGACTAATTTG+CGG | 0.484236 | 1.2:-62772967 | MS.gene062162:CDS |
| TGGCCGTACCGTTTCTGGTA+GGG | 0.487172 | 1.2:-62773083 | MS.gene062162:CDS |
| ATGGCCGTACCGTTTCTGGT+AGG | 0.493169 | 1.2:-62773084 | MS.gene062162:CDS |
| TCTGGACTAATTTGCGGGGA+AGG | 0.499946 | 1.2:-62772961 | MS.gene062162:CDS |
| GAGCTTCTTCCTGTTCTACA+AGG | 0.503256 | 1.2:-62773319 | MS.gene062162:CDS |
| CAAGCTTGCAACCCAAAGGT+TGG | 0.503431 | 1.2:+62774344 | None:intergenic |
| CAGAAACATGGCAGTTATAG+GGG | 0.504777 | 1.2:-62773241 | MS.gene062162:CDS |
| TACGAACATCGCCCTGGGAG+AGG | 0.508872 | 1.2:+62773386 | None:intergenic |
| TTGTTTGTGAGTATGATGAT+TGG | 0.510508 | 1.2:-62775767 | MS.gene062162:CDS |
| ATGAAGCTGAACCTTACAAC+AGG | 0.516868 | 1.2:-62775722 | MS.gene062162:CDS |
| CCAAGTAGTTGGCACTGCAA+TGG | 0.516937 | 1.2:-62773361 | MS.gene062162:CDS |
| TTAAAGAACCTGCATTTGGT+TGG | 0.523266 | 1.2:-62775084 | MS.gene062162:CDS |
| ACGGCCATGACCATCGGTAA+TGG | 0.525061 | 1.2:+62773099 | None:intergenic |
| CTTAGAAGAAACTAACATGA+AGG | 0.531827 | 1.2:-62774062 | MS.gene062162:CDS |
| AAGTATGCCCCTACCAGAAA+CGG | 0.532502 | 1.2:+62773075 | None:intergenic |
| ACCGCTGTTGCAAAACCACT+TGG | 0.532997 | 1.2:+62774616 | None:intergenic |
| TAATCCAATCTGATGAACAT+TGG | 0.534849 | 1.2:-62775814 | MS.gene062162:CDS |
| TCTCATTAAATCCGTGATCT+CGG | 0.542009 | 1.2:-62773457 | MS.gene062162:CDS |
| CTTCCAAGCTTGCAACCCAA+AGG | 0.543418 | 1.2:+62774340 | None:intergenic |
| AACGGTACGGCCATGACCAT+CGG | 0.544921 | 1.2:+62773093 | None:intergenic |
| GCATTGCAGAATGCGAGAGA+TGG | 0.551488 | 1.2:+62773600 | None:intergenic |
| CCAATGTGGATCGGGGTGGT+TGG | 0.555058 | 1.2:-62773717 | MS.gene062162:CDS |
| CCAACCACCCCGATCCACAT+TGG | 0.558976 | 1.2:+62773717 | None:intergenic |
| TTCTACAAGGCATTTGATGT+GGG | 0.559939 | 1.2:-62773306 | MS.gene062162:CDS |
| TTTGCAATTGATATGTGCAC+AGG | 0.560248 | 1.2:-62773054 | MS.gene062162:CDS |
| GTGGCAGCACTTGTTGGGTG+TGG | 0.560583 | 1.2:-62773480 | MS.gene062162:CDS |
| GTAACAAATTTCATGCAGAT+AGG | 0.560658 | 1.2:+62772889 | None:intergenic |
| CCAGACATCCAACCAAATGC+AGG | 0.560714 | 1.2:+62775076 | None:intergenic |
| GTTCTACAAGGCATTTGATG+TGG | 0.561788 | 1.2:-62773307 | MS.gene062162:CDS |
| GAGAGCATTCCAATGTGGAT+CGG | 0.564131 | 1.2:-62773726 | MS.gene062162:CDS |
| CTCAATTTACCTTATCCAAG+TGG | 0.567851 | 1.2:-62774631 | MS.gene062162:CDS |
| TTAGAAGAAACTAACATGAA+GGG | 0.576320 | 1.2:-62774061 | MS.gene062162:CDS |
| GATGCCATTACCGATGGTCA+TGG | 0.577978 | 1.2:-62773103 | MS.gene062162:CDS |
| CACTTGGATAAGGTAAATTG+AGG | 0.578530 | 1.2:+62774632 | None:intergenic |
| CAGAGACAAGTTCACAAGGT+GGG | 0.586027 | 1.2:+62774162 | None:intergenic |
| TCTGTAAATTAGCGCATAAG+GGG | 0.587143 | 1.2:+62773260 | None:intergenic |
| TGATTCTTTCATGTACGCCA+AGG | 0.587279 | 1.2:+62773951 | None:intergenic |
| GCTAGAGCAAGAATAGCAGC+AGG | 0.590008 | 1.2:+62772925 | None:intergenic |
| TGGCATACGAACATCGCCCT+GGG | 0.590951 | 1.2:+62773381 | None:intergenic |
| TTGCACACGCACCTCTCCCA+GGG | 0.591980 | 1.2:-62773397 | MS.gene062162:CDS |
| TTAATCAGAACATGGAGGAA+AGG | 0.596522 | 1.2:-62775859 | MS.gene062162:CDS |
| ATTGCAAGACACCGAGATCA+CGG | 0.597470 | 1.2:+62773446 | None:intergenic |
| CCTTTACGCCGATCAACAAG+CGG | 0.598669 | 1.2:+62774103 | None:intergenic |
| TTAGCTGCTGATGATATGCA+CGG | 0.598888 | 1.2:-62773792 | MS.gene062162:CDS |
| TTGTCTGGAGTAGGCACTGA+GGG | 0.599934 | 1.2:-62775124 | MS.gene062162:CDS |
| GATATGCACGGGAATCCAAA+TGG | 0.600924 | 1.2:-62773780 | MS.gene062162:CDS |
| CATAAGAGAGCACAGCTCCA+AGG | 0.601707 | 1.2:+62774137 | None:intergenic |
| ACAAATTTCATGCAGATAGG+CGG | 0.603089 | 1.2:+62772892 | None:intergenic |
| TCAGCTGAGGAAACATGCGC+GGG | 0.603914 | 1.2:+62773658 | None:intergenic |
| ACATATGTGTTGTCTGGAGT+AGG | 0.606766 | 1.2:-62775133 | MS.gene062162:CDS |
| TGCGCTAATTTACAGAAACA+TGG | 0.611107 | 1.2:-62773253 | MS.gene062162:CDS |
| ATTGCTCTAATCCTTGGTGA+TGG | 0.613675 | 1.2:-62774010 | MS.gene062162:CDS |
| ACTGTGACAGGAAAAGAGAA+TGG | 0.615219 | 1.2:-62773507 | MS.gene062162:CDS |
| TGCCCCTACCAGAAACGGTA+CGG | 0.622037 | 1.2:+62773080 | None:intergenic |
| ATGTTCGTATGCCAAGTAGT+TGG | 0.622489 | 1.2:-62773372 | MS.gene062162:CDS |
| AGGAAAAGAGAATGGTGTAG+TGG | 0.626117 | 1.2:-62773499 | MS.gene062162:CDS |
| GCTGAACCTTACAACAGGAA+TGG | 0.626965 | 1.2:-62775717 | MS.gene062162:CDS |
| TAGCTGCTGATGATATGCAC+GGG | 0.628013 | 1.2:-62773791 | MS.gene062162:CDS |
| TTCAGCTGAGGAAACATGCG+CGG | 0.629166 | 1.2:+62773657 | None:intergenic |
| GAAATGGATGCCATTACCGA+TGG | 0.631123 | 1.2:-62773109 | MS.gene062162:CDS |
| TAATTTGCGGGGAAGGACTG+TGG | 0.634672 | 1.2:-62772954 | MS.gene062162:CDS |
| ACATAGTACCATTTCAGCTG+AGG | 0.638500 | 1.2:+62773645 | None:intergenic |
| TTCTCAGGCAAAGAAGACTG+TGG | 0.640879 | 1.2:-62774380 | MS.gene062162:CDS |
| CAAAGTTGCAAGCAATGTCG+AGG | 0.653267 | 1.2:+62773198 | None:intergenic |
| AAGAGATATTAATCAGAACA+TGG | 0.654492 | 1.2:-62775867 | MS.gene062162:CDS |
| GGAGCAGAGACAAGTTCACA+AGG | 0.657179 | 1.2:+62774158 | None:intergenic |
| GAGCATTCCAATGTGGATCG+GGG | 0.663368 | 1.2:-62773724 | MS.gene062162:CDS |
| AAGTCCACTAAACATCAACA+TGG | 0.666317 | 1.2:-62775918 | MS.gene062162:CDS |
| ATTTCAGGAAGCAAGTACAT+GGG | 0.670330 | 1.2:-62774454 | MS.gene062162:intron |
| AGGTCTCACCGATATAAACA+TGG | 0.670610 | 1.2:-62773568 | MS.gene062162:CDS |
| TTTGATGTGGGAAATCCACA+TGG | 0.672631 | 1.2:-62773294 | MS.gene062162:CDS |
| TGAAGGAGAGCATTCCAATG+TGG | 0.677015 | 1.2:-62773731 | MS.gene062162:CDS |
| TAGAACAGGAAGAAGCTCAG+AGG | 0.678038 | 1.2:+62773324 | None:intergenic |
| TGCTTCTGGACTAATTTGCG+GGG | 0.681116 | 1.2:-62772965 | MS.gene062162:CDS |
| GGACTACAAACCTTTCTGAG+TGG | 0.685333 | 1.2:+62775010 | None:intergenic |
| GGGGCTTTGAATTCTCCATG+TGG | 0.688129 | 1.2:+62773279 | None:intergenic |
| GCAGAGACAAGTTCACAAGG+TGG | 0.689164 | 1.2:+62774161 | None:intergenic |
| CATTCCAATGTGGATCGGGG+TGG | 0.693940 | 1.2:-62773721 | MS.gene062162:CDS |
| AAGTATATACGCCATCACCA+AGG | 0.720711 | 1.2:+62773999 | None:intergenic |
| AGATATTAATCAGAACATGG+AGG | 0.737419 | 1.2:-62775864 | MS.gene062162:CDS |
| AAGTAGTTGGCACTGCAATG+GGG | 0.753918 | 1.2:-62773359 | MS.gene062162:CDS |
| GTTGTCTGGAGTAGGCACTG+AGG | 0.773435 | 1.2:-62775125 | MS.gene062162:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTATATTATAATATTTC+AGG | - | chr1.2:62774365-62774384 | MS.gene062162:CDS | 10.0% |
| !! | TGAAATATTATAATATAAGA+TGG | + | chr1.2:62774366-62774385 | None:intergenic | 10.0% |
| !! | ATGTTACTAATCTTATTATT+TGG | - | chr1.2:62774585-62774604 | MS.gene062162:CDS | 15.0% |
| !! | CATATAATATATAATTGGTT+TGG | - | chr1.2:62774540-62774559 | MS.gene062162:intron | 15.0% |
| !! | TCAAGCATATAATATATAAT+TGG | - | chr1.2:62774535-62774554 | MS.gene062162:intron | 15.0% |
| !!! | AAGTAGATTTTATTAAAAAG+TGG | - | chr1.2:62773993-62774012 | MS.gene062162:CDS | 15.0% |
| !!! | TTAATAAAATCTACTTCTTT+TGG | + | chr1.2:62773989-62774008 | None:intergenic | 15.0% |
| !! | ATAAACATGGCATATAATTA+CGG | - | chr1.2:62775279-62775298 | MS.gene062162:intron | 20.0% |
| !! | ATTATATGCCATGTTTATAT+CGG | + | chr1.2:62775277-62775296 | None:intergenic | 20.0% |
| !! | GAAAAATTCAAAAGAAGAAA+GGG | + | chr1.2:62774957-62774976 | None:intergenic | 20.0% |
| !! | GAAAATGATAAATATGTAGT+AGG | + | chr1.2:62773318-62773337 | None:intergenic | 20.0% |
| !! | TAACATTCTCCTTAATTAAT+TGG | + | chr1.2:62773936-62773955 | None:intergenic | 20.0% |
| !! | TGAAAAATTCAAAAGAAGAA+AGG | + | chr1.2:62774958-62774977 | None:intergenic | 20.0% |
| !!! | ATCCAAATTTTTGTACAAAA+AGG | + | chr1.2:62773866-62773885 | None:intergenic | 20.0% |
| !!! | TCATTTTTTTGAGAACAAAA+TGG | - | chr1.2:62773595-62773614 | MS.gene062162:CDS | 20.0% |
| !!! | TTAATTAGACACTGAATTTT+TGG | + | chr1.2:62774146-62774165 | None:intergenic | 20.0% |
| ! | AAAGAAGCTCCAATTAATTA+AGG | - | chr1.2:62773924-62773943 | MS.gene062162:intron | 25.0% |
| ! | AAGAGATATTAATCAGAACA+TGG | - | chr1.2:62772967-62772986 | MS.gene062162:CDS | 25.0% |
| ! | TAAACATGGCATATAATTAC+GGG | - | chr1.2:62775280-62775299 | MS.gene062162:intron | 25.0% |
| ! | TGTTGCAATTTGGAAAATAA+AGG | - | chr1.2:62774325-62774344 | MS.gene062162:intron | 25.0% |
| ! | TTAGAAGAAACTAACATGAA+GGG | - | chr1.2:62774773-62774792 | MS.gene062162:intron | 25.0% |
| ! | TTTGTAGTCCTATAATACTT+TGG | - | chr1.2:62773837-62773856 | MS.gene062162:intron | 25.0% |
| !! | ATTTTTCACCCAAAAAGATT+GGG | - | chr1.2:62775703-62775722 | MS.gene062162:CDS | 25.0% |
| !! | CTCCTTTTTGTACAAAAATT+TGG | - | chr1.2:62773861-62773880 | MS.gene062162:intron | 25.0% |
| !! | TAGTTTCTTCTAAGTTTTCA+GGG | + | chr1.2:62774766-62774785 | None:intergenic | 25.0% |
| !! | TATGTTCTTTACCCTTTTTA+TGG | + | chr1.2:62774919-62774938 | None:intergenic | 25.0% |
| !! | TCTGAATAATGGTATTTTCT+TGG | + | chr1.2:62773246-62773265 | None:intergenic | 25.0% |
| !! | TTAGTTTCTTCTAAGTTTTC+AGG | + | chr1.2:62774767-62774786 | None:intergenic | 25.0% |
| !!! | AACTTTTGTTTGTTGCAATT+TGG | - | chr1.2:62774315-62774334 | MS.gene062162:intron | 25.0% |
| !!! | ATTTTTCGATCAGTTTCTTA+TGG | - | chr1.2:62774413-62774432 | MS.gene062162:CDS | 25.0% |
| !!! | CATTTAAAAGTACTGAAAGA+TGG | + | chr1.2:62773902-62773921 | None:intergenic | 25.0% |
| !!! | TTTTTCGATCAGTTTCTTAT+GGG | - | chr1.2:62774414-62774433 | MS.gene062162:CDS | 25.0% |
| AAGAGCAAGAACCATAAAAA+GGG | - | chr1.2:62774905-62774924 | MS.gene062162:intron | 30.0% | |
| AATCAGATCATGTTCAAGTA+AGG | - | chr1.2:62773404-62773423 | MS.gene062162:CDS | 30.0% | |
| AATTCCATGTTGATGTTTAG+TGG | + | chr1.2:62772923-62772942 | None:intergenic | 30.0% | |
| ACAGAACACATAACAATAAG+AGG | - | chr1.2:62773043-62773062 | MS.gene062162:CDS | 30.0% | |
| ACTAACATGAAGGGTTTATA+TGG | - | chr1.2:62774782-62774801 | MS.gene062162:intron | 30.0% | |
| AGATATTAATCAGAACATGG+AGG | - | chr1.2:62772970-62772989 | MS.gene062162:CDS | 30.0% | |
| ATTATTTCAGCTCCTATAAC+TGG | + | chr1.2:62773004-62773023 | None:intergenic | 30.0% | |
| CAACAAAGCAAACAACAAAA+AGG | + | chr1.2:62773787-62773806 | None:intergenic | 30.0% | |
| CTAAACATCAACATGGAATT+TGG | - | chr1.2:62772923-62772942 | MS.gene062162:CDS | 30.0% | |
| CTTAGAAGAAACTAACATGA+AGG | - | chr1.2:62774772-62774791 | MS.gene062162:intron | 30.0% | |
| GAAGAGATGTTTATAGTACT+TGG | + | chr1.2:62774282-62774301 | None:intergenic | 30.0% | |
| GAAGGGTTTATATGGTTATA+AGG | - | chr1.2:62774790-62774809 | MS.gene062162:intron | 30.0% | |
| GGAATTTGGAGAGAAAAAAA+TGG | - | chr1.2:62772937-62772956 | MS.gene062162:CDS | 30.0% | |
| GTAACAAATTTCATGCAGAT+AGG | + | chr1.2:62775948-62775967 | None:intergenic | 30.0% | |
| GTTCTCAAAAAAATGAACTC+TGG | + | chr1.2:62773591-62773610 | None:intergenic | 30.0% | |
| TAATCCAATCTGATGAACAT+TGG | - | chr1.2:62773020-62773039 | MS.gene062162:CDS | 30.0% | |
| TCAAAAAAATGAACTCTGGT+TGG | + | chr1.2:62773587-62773606 | None:intergenic | 30.0% | |
| TTCTGTAAATTAGCGCATAA+GGG | + | chr1.2:62775578-62775597 | None:intergenic | 30.0% | |
| TTGTTTGTGAGTATGATGAT+TGG | - | chr1.2:62773067-62773086 | MS.gene062162:CDS | 30.0% | |
| TTTCTGTAAATTAGCGCATA+AGG | + | chr1.2:62775579-62775598 | None:intergenic | 30.0% | |
| ! | AAAGGAGTCCAAAGTATTAT+AGG | + | chr1.2:62773848-62773867 | None:intergenic | 30.0% |
| ! | AGAATGTTTGAGCTTGTTTA+AGG | + | chr1.2:62775083-62775102 | None:intergenic | 30.0% |
| ! | ATCCATTTCCCAATCTTTTT+GGG | + | chr1.2:62775714-62775733 | None:intergenic | 30.0% |
| ! | CTTTTGTGTTTGTAAGAAGT+TGG | - | chr1.2:62773173-62773192 | MS.gene062162:CDS | 30.0% |
| ! | GATTTTTCACCCAAAAAGAT+TGG | - | chr1.2:62775702-62775721 | MS.gene062162:CDS | 30.0% |
| ! | TTCTTTAAGTGGTTTTTCTC+AGG | - | chr1.2:62774439-62774458 | MS.gene062162:CDS | 30.0% |
| ! | TTTTCGATCAGTTTCTTATG+GGG | - | chr1.2:62774415-62774434 | MS.gene062162:CDS | 30.0% |
| !! | TTGCAAAGCCATTTTGTTAA+CGG | + | chr1.2:62774108-62774127 | None:intergenic | 30.0% |
| !!! | ATTGCTTGCAACTTTGTTTT+GGG | - | chr1.2:62775643-62775662 | MS.gene062162:CDS | 30.0% |
| !!! | CTTTTTGTTGTTTGCTTTGT+TGG | - | chr1.2:62773785-62773804 | MS.gene062162:CDS | 30.0% |
| AACAGCACAAGTCTGAATAA+TGG | + | chr1.2:62773257-62773276 | None:intergenic | 35.0% | |
| AAGTCCACTAAACATCAACA+TGG | - | chr1.2:62772916-62772935 | MS.gene062162:CDS | 35.0% | |
| ACAAATTTCATGCAGATAGG+CGG | + | chr1.2:62775945-62775964 | None:intergenic | 35.0% | |
| ACAAGCTCAAACATTCTTGA+AGG | - | chr1.2:62775086-62775105 | MS.gene062162:CDS | 35.0% | |
| ACAGAAACATGGCAGTTATA+GGG | - | chr1.2:62775592-62775611 | MS.gene062162:CDS | 35.0% | |
| ATCATCAGCAGCTAATTCTA+AGG | + | chr1.2:62775037-62775056 | None:intergenic | 35.0% | |
| ATTGCTTCTGGACTAATTTG+CGG | - | chr1.2:62775867-62775886 | MS.gene062162:CDS | 35.0% | |
| ATTTCAGGAAGCAAGTACAT+GGG | - | chr1.2:62774380-62774399 | MS.gene062162:CDS | 35.0% | |
| CAAGAGCAAGAACCATAAAA+AGG | - | chr1.2:62774904-62774923 | MS.gene062162:intron | 35.0% | |
| CACTTGGATAAGGTAAATTG+AGG | + | chr1.2:62774205-62774224 | None:intergenic | 35.0% | |
| CATATCTGTTGGGATTAAAC+AGG | - | chr1.2:62773675-62773694 | MS.gene062162:CDS | 35.0% | |
| CTATCAATTGCTCTAATCCT+TGG | - | chr1.2:62774818-62774837 | MS.gene062162:intron | 35.0% | |
| CTCAATTTACCTTATCCAAG+TGG | - | chr1.2:62774203-62774222 | MS.gene062162:CDS | 35.0% | |
| GACAGTTGAAACTAGAATCT+TGG | + | chr1.2:62774864-62774883 | None:intergenic | 35.0% | |
| GTCCTTGATTTCTAACGAAA+CGG | + | chr1.2:62773360-62773379 | None:intergenic | 35.0% | |
| TACAGAAACATGGCAGTTAT+AGG | - | chr1.2:62775591-62775610 | MS.gene062162:CDS | 35.0% | |
| TATTTCAGGAAGCAAGTACA+TGG | - | chr1.2:62774379-62774398 | MS.gene062162:CDS | 35.0% | |
| TCACACACAGGATGATAAAA+TGG | - | chr1.2:62774256-62774275 | MS.gene062162:intron | 35.0% | |
| TCGTTAACGAGATTCAACTA+AGG | - | chr1.2:62773468-62773487 | MS.gene062162:CDS | 35.0% | |
| TCGTTAACGATTGAAGTATG+AGG | + | chr1.2:62773458-62773477 | None:intergenic | 35.0% | |
| TCTCATTAAATCCGTGATCT+CGG | - | chr1.2:62775377-62775396 | MS.gene062162:intron | 35.0% | |
| TCTGTAAATTAGCGCATAAG+GGG | + | chr1.2:62775577-62775596 | None:intergenic | 35.0% | |
| TCTTATGGGGTTTCTTTAAG+TGG | - | chr1.2:62774428-62774447 | MS.gene062162:CDS | 35.0% | |
| TGCGCTAATTTACAGAAACA+TGG | - | chr1.2:62775581-62775600 | MS.gene062162:CDS | 35.0% | |
| TGTCTTAATTCCACTCAGAA+AGG | - | chr1.2:62773814-62773833 | MS.gene062162:intron | 35.0% | |
| TTAAAGAACCTGCATTTGGT+TGG | - | chr1.2:62773750-62773769 | MS.gene062162:CDS | 35.0% | |
| TTAATCAGAACATGGAGGAA+AGG | - | chr1.2:62772975-62772994 | MS.gene062162:CDS | 35.0% | |
| TTCCGTTTCGTTAGAAATCA+AGG | - | chr1.2:62773355-62773374 | MS.gene062162:CDS | 35.0% | |
| TTCGTTAGAAATCAAGGACA+CGG | - | chr1.2:62773361-62773380 | MS.gene062162:CDS | 35.0% | |
| TTGAACAGTTTCCAACCTTT+GGG | - | chr1.2:62774479-62774498 | MS.gene062162:intron | 35.0% | |
| TTTGAACAGTTTCCAACCTT+TGG | - | chr1.2:62774478-62774497 | MS.gene062162:intron | 35.0% | |
| TTTGCAATTGATATGTGCAC+AGG | - | chr1.2:62775780-62775799 | MS.gene062162:CDS | 35.0% | |
| ! | ACTAAAGTGCTTGAAAAAGC+TGG | - | chr1.2:62773196-62773215 | MS.gene062162:CDS | 35.0% |
| ! | AGGATTTGCTTCATATCTGT+TGG | - | chr1.2:62773664-62773683 | MS.gene062162:CDS | 35.0% |
| ! | CATCCATTTCCCAATCTTTT+TGG | + | chr1.2:62775715-62775734 | None:intergenic | 35.0% |
| ! | GGATTTGCTTCATATCTGTT+GGG | - | chr1.2:62773665-62773684 | MS.gene062162:CDS | 35.0% |
| ! | TTATGTATCCGCTTGTTGAT+CGG | - | chr1.2:62774723-62774742 | MS.gene062162:intron | 35.0% |
| ! | TTCTACAAGGCATTTGATGT+GGG | - | chr1.2:62775528-62775547 | MS.gene062162:intron | 35.0% |
| !! | ATTCTAGTTTCAACTGTCCT+TGG | - | chr1.2:62774866-62774885 | MS.gene062162:intron | 35.0% |
| !! | CATTGCTTGCAACTTTGTTT+TGG | - | chr1.2:62775642-62775661 | MS.gene062162:CDS | 35.0% |
| !! | GATTTTAGCACGACTTTTGT+GGG | - | chr1.2:62774632-62774651 | MS.gene062162:CDS | 35.0% |
| !! | TGCAAAGCCATTTTGTTAAC+GGG | + | chr1.2:62774107-62774126 | None:intergenic | 35.0% |
| !! | TTGATGTTTAGTGGACTTGA+TGG | + | chr1.2:62772914-62772933 | None:intergenic | 35.0% |
| !!! | GAAAGTTGCACTATTTTTGC+TGG | - | chr1.2:62775302-62775321 | MS.gene062162:intron | 35.0% |
| AACCATCAACTCTGCTTTCT+TGG | + | chr1.2:62775841-62775860 | None:intergenic | 40.0% | |
| AAGTATATACGCCATCACCA+AGG | + | chr1.2:62774838-62774857 | None:intergenic | 40.0% | |
| ACATAGTACCATTTCAGCTG+AGG | + | chr1.2:62775192-62775211 | None:intergenic | 40.0% | |
| ACTGTGACAGGAAAAGAGAA+TGG | - | chr1.2:62775327-62775346 | MS.gene062162:intron | 40.0% | |
| AGGAAAAGAGAATGGTGTAG+TGG | - | chr1.2:62775335-62775354 | MS.gene062162:intron | 40.0% | |
| AGGAAGACATATGTGTTGTC+TGG | - | chr1.2:62773695-62773714 | MS.gene062162:CDS | 40.0% | |
| AGGTCTCACCGATATAAACA+TGG | - | chr1.2:62775266-62775285 | MS.gene062162:intron | 40.0% | |
| ATACTTAACCAATGCTCCTG+GGG | + | chr1.2:62773966-62773985 | None:intergenic | 40.0% | |
| ATGAAGCTGAACCTTACAAC+AGG | - | chr1.2:62773112-62773131 | MS.gene062162:CDS | 40.0% | |
| ATGTTCGTATGCCAAGTAGT+TGG | - | chr1.2:62775462-62775481 | MS.gene062162:intron | 40.0% | |
| ATTAGTCCAGAAGCAATTGC+TGG | + | chr1.2:62775864-62775883 | None:intergenic | 40.0% | |
| ATTGCTCTAATCCTTGGTGA+TGG | - | chr1.2:62774824-62774843 | MS.gene062162:intron | 40.0% | |
| CACCCAAAAAGATTGGGAAA+TGG | - | chr1.2:62775709-62775728 | MS.gene062162:CDS | 40.0% | |
| CAGAAACATGGCAGTTATAG+GGG | - | chr1.2:62775593-62775612 | MS.gene062162:CDS | 40.0% | |
| CATCAAATGCCTTGTAGAAC+AGG | + | chr1.2:62775527-62775546 | None:intergenic | 40.0% | |
| CTGTCCAATGTTCATCAGAT+TGG | + | chr1.2:62773027-62773046 | None:intergenic | 40.0% | |
| CTTGCACATTCTTCTTATGC+AGG | - | chr1.2:62774166-62774185 | MS.gene062162:CDS | 40.0% | |
| GATACTTAACCAATGCTCCT+GGG | + | chr1.2:62773967-62773986 | None:intergenic | 40.0% | |
| GCAGCAGAGACATTCAAATT+TGG | + | chr1.2:62773145-62773164 | None:intergenic | 40.0% | |
| GCAGTTAAAGAACCTGCATT+TGG | - | chr1.2:62773746-62773765 | MS.gene062162:CDS | 40.0% | |
| GTTGCAAAACCACTTGGATA+AGG | + | chr1.2:62774215-62774234 | None:intergenic | 40.0% | |
| TAATCCAGAGTTCGGTTAGA+AGG | + | chr1.2:62773564-62773583 | None:intergenic | 40.0% | |
| TGATATGTGCACAGGTAGTT+TGG | - | chr1.2:62775788-62775807 | MS.gene062162:CDS | 40.0% | |
| TGATTCTTTCATGTACGCCA+AGG | + | chr1.2:62774886-62774905 | None:intergenic | 40.0% | |
| TTAGCTGCTGATGATATGCA+CGG | - | chr1.2:62775042-62775061 | MS.gene062162:CDS | 40.0% | |
| TTGATCGGCGTAAAGGAAAT+TGG | - | chr1.2:62774738-62774757 | MS.gene062162:intron | 40.0% | |
| TTGGAACCATTCCTGTTGTA+AGG | + | chr1.2:62773126-62773145 | None:intergenic | 40.0% | |
| TTTGATGTGGGAAATCCACA+TGG | - | chr1.2:62775540-62775559 | MS.gene062162:intron | 40.0% | |
| ! | ACATATGTGTTGTCTGGAGT+AGG | - | chr1.2:62773701-62773720 | MS.gene062162:CDS | 40.0% |
| ! | CATCAATGGTTTTCACACAC+AGG | - | chr1.2:62774244-62774263 | MS.gene062162:intron | 40.0% |
| ! | GCTTGTTTAAGGTCACCATT+TGG | + | chr1.2:62775072-62775091 | None:intergenic | 40.0% |
| ! | GTATTTTCTTGGCGAGTGAA+TGG | + | chr1.2:62773235-62773254 | None:intergenic | 40.0% |
| ! | GTTCTACAAGGCATTTGATG+TGG | - | chr1.2:62775527-62775546 | MS.gene062162:intron | 40.0% |
| ! | TGCTATAGCATTGCTGTTAG+CGG | - | chr1.2:62773280-62773299 | MS.gene062162:CDS | 40.0% |
| ! | TTGCTTCTGGACTAATTTGC+GGG | - | chr1.2:62775868-62775887 | MS.gene062162:CDS | 40.0% |
| !! | CGATTTTAGCACGACTTTTG+TGG | - | chr1.2:62774631-62774650 | MS.gene062162:CDS | 40.0% |
| !! | GGGTTCTTTGCTTTTGCAAT+AGG | - | chr1.2:62775663-62775682 | MS.gene062162:CDS | 40.0% |
| AAGTAGTTGGCACTGCAATG+GGG | - | chr1.2:62775475-62775494 | MS.gene062162:intron | 45.0% | |
| AAGTATGCCCCTACCAGAAA+CGG | + | chr1.2:62775762-62775781 | None:intergenic | 45.0% | |
| AGAATGTTAAACAGTGCCCC+AGG | - | chr1.2:62773947-62773966 | MS.gene062162:CDS | 45.0% | |
| ATGGCAGTTATAGGGGTTCA+AGG | - | chr1.2:62775600-62775619 | MS.gene062162:CDS | 45.0% | |
| ATGGTTCCAGCAATTGCTTC+TGG | - | chr1.2:62775855-62775874 | MS.gene062162:CDS | 45.0% | |
| ATTCCTTAACGAGTGCCCTA+GGG | - | chr1.2:62774078-62774097 | MS.gene062162:CDS | 45.0% | |
| ATTGCAAGACACCGAGATCA+CGG | + | chr1.2:62775391-62775410 | None:intergenic | 45.0% | |
| CAAAGTTGCAAGCAATGTCG+AGG | + | chr1.2:62775639-62775658 | None:intergenic | 45.0% | |
| CAAGTAGTTGGCACTGCAAT+GGG | - | chr1.2:62775474-62775493 | MS.gene062162:intron | 45.0% | |
| CAGAGACAAGTTCACAAGGT+GGG | + | chr1.2:62774675-62774694 | None:intergenic | 45.0% | |
| CAGGTTCTTTAACTGCGCTT+GGG | + | chr1.2:62773742-62773761 | None:intergenic | 45.0% | |
| CTCCAAGAAAGCAGAGTTGA+TGG | - | chr1.2:62775836-62775855 | MS.gene062162:CDS | 45.0% | |
| CTTACCTTCTAACCGAACTC+TGG | - | chr1.2:62773557-62773576 | MS.gene062162:CDS | 45.0% | |
| GAAATGGATGCCATTACCGA+TGG | - | chr1.2:62775725-62775744 | MS.gene062162:CDS | 45.0% | |
| GAGCTTCTTCCTGTTCTACA+AGG | - | chr1.2:62775515-62775534 | MS.gene062162:intron | 45.0% | |
| GAGGAAAGGTTGCCAGTTAT+AGG | - | chr1.2:62772989-62773008 | MS.gene062162:CDS | 45.0% | |
| GATATGCACGGGAATCCAAA+TGG | - | chr1.2:62775054-62775073 | MS.gene062162:CDS | 45.0% | |
| GCATGTTTCCTCAGCTGAAA+TGG | - | chr1.2:62775181-62775200 | MS.gene062162:intron | 45.0% | |
| GCTGAACCTTACAACAGGAA+TGG | - | chr1.2:62773117-62773136 | MS.gene062162:CDS | 45.0% | |
| GGACTACAAACCTTTCTGAG+TGG | + | chr1.2:62773827-62773846 | None:intergenic | 45.0% | |
| GGATACTTAACCAATGCTCC+TGG | + | chr1.2:62773968-62773987 | None:intergenic | 45.0% | |
| TAGAACAGGAAGAAGCTCAG+AGG | + | chr1.2:62775513-62775532 | None:intergenic | 45.0% | |
| TAGCTGCTGATGATATGCAC+GGG | - | chr1.2:62775043-62775062 | MS.gene062162:CDS | 45.0% | |
| TTCTCAGGCAAAGAAGACTG+TGG | - | chr1.2:62774454-62774473 | MS.gene062162:intron | 45.0% | |
| TTTGCGCTTGTGTGTGTTGT+AGG | - | chr1.2:62773641-62773660 | MS.gene062162:CDS | 45.0% | |
| ! | AGAGCATTCCAATGTGGATC+GGG | - | chr1.2:62775109-62775128 | MS.gene062162:CDS | 45.0% |
| ! | CTCGCATTCTGCAATGCTTT+TGG | - | chr1.2:62775240-62775259 | MS.gene062162:intron | 45.0% |
| ! | TAGCATTGCTGTTAGCGGTA+AGG | - | chr1.2:62773285-62773304 | MS.gene062162:CDS | 45.0% |
| ! | TGCTTCTGGACTAATTTGCG+GGG | - | chr1.2:62775869-62775888 | MS.gene062162:CDS | 45.0% |
| ! | TTTTTGCTGGCAACTGTGAC+AGG | - | chr1.2:62775315-62775334 | MS.gene062162:intron | 45.0% |
| !! | CTGGTTGGTAATCCAGAGTT+CGG | + | chr1.2:62773572-62773591 | None:intergenic | 45.0% |
| !! | GAGAGCATTCCAATGTGGAT+CGG | - | chr1.2:62775108-62775127 | MS.gene062162:CDS | 45.0% |
| !! | TCCAAGTGGTTTTGCAACAG+CGG | - | chr1.2:62774217-62774236 | MS.gene062162:intron | 45.0% |
| !! | TGAAGGAGAGCATTCCAATG+TGG | - | chr1.2:62775103-62775122 | MS.gene062162:CDS | 45.0% |
| !!! | TTCTGCAATGCTTTTGGAGC+AGG | - | chr1.2:62775246-62775265 | MS.gene062162:intron | 45.0% |
| !! | ATAATACTAATATTAATATA+TGG | - | chr1.2:62774981-62775000 | MS.gene062162:intron | 5.0% |
| !! | TAATACTAATATTAATATAT+GGG | - | chr1.2:62774982-62775001 | MS.gene062162:intron | 5.0% |
| ACCGCTGTTGCAAAACCACT+TGG | + | chr1.2:62774221-62774240 | None:intergenic | 50.0% | |
| CAAGCTTGCAACCCAAAGGT+TGG | + | chr1.2:62774493-62774512 | None:intergenic | 50.0% | |
| CCAAGTAGTTGGCACTGCAA+TGG | - | chr1.2:62775473-62775492 | MS.gene062162:intron | 50.0% | |
| CCAGACATCCAACCAAATGC+AGG | + | chr1.2:62773761-62773780 | None:intergenic | 50.0% | |
| CCATTGCAGTGCCAACTACT+TGG | + | chr1.2:62775476-62775495 | None:intergenic | 50.0% | |
| CCTGCATTTGGTTGGATGTC+TGG | - | chr1.2:62773758-62773777 | MS.gene062162:CDS | 50.0% | |
| CCTTTACGCCGATCAACAAG+CGG | + | chr1.2:62774734-62774753 | None:intergenic | 50.0% | |
| CTTCCAAGCTTGCAACCCAA+AGG | + | chr1.2:62774497-62774516 | None:intergenic | 50.0% | |
| CTTGGAGCTGTGCTCTCTTA+TGG | - | chr1.2:62774698-62774717 | MS.gene062162:intron | 50.0% | |
| GAGCATTCCAATGTGGATCG+GGG | - | chr1.2:62775110-62775129 | MS.gene062162:CDS | 50.0% | |
| GATGCCATTACCGATGGTCA+TGG | - | chr1.2:62775731-62775750 | MS.gene062162:CDS | 50.0% | |
| GATTCCTTAACGAGTGCCCT+AGG | - | chr1.2:62774077-62774096 | MS.gene062162:CDS | 50.0% | |
| GCAACAGCGGTTCTCATCAA+TGG | - | chr1.2:62774230-62774249 | MS.gene062162:intron | 50.0% | |
| GCAGAGACAAGTTCACAAGG+TGG | + | chr1.2:62774676-62774695 | None:intergenic | 50.0% | |
| GCAGGTTCTTTAACTGCGCT+TGG | + | chr1.2:62773743-62773762 | None:intergenic | 50.0% | |
| GCATTGCAGAATGCGAGAGA+TGG | + | chr1.2:62775237-62775256 | None:intergenic | 50.0% | |
| GCTAGAGCAAGAATAGCAGC+AGG | + | chr1.2:62775912-62775931 | None:intergenic | 50.0% | |
| GGAGCAGAGACAAGTTCACA+AGG | + | chr1.2:62774679-62774698 | None:intergenic | 50.0% | |
| GTGAACTTGTCTCTGCTCCT+TGG | - | chr1.2:62774680-62774699 | MS.gene062162:intron | 50.0% | |
| GTGTAGTGGCAGCACTTGTT+GGG | - | chr1.2:62775349-62775368 | MS.gene062162:intron | 50.0% | |
| TTCAGCTGAGGAAACATGCG+CGG | + | chr1.2:62775180-62775199 | None:intergenic | 50.0% | |
| TTCCTTAACGAGTGCCCTAG+GGG | - | chr1.2:62774079-62774098 | MS.gene062162:CDS | 50.0% | |
| ! | CATAAGAGAGCACAGCTCCA+AGG | + | chr1.2:62774700-62774719 | None:intergenic | 50.0% |
| ! | TAATTTGCGGGGAAGGACTG+TGG | - | chr1.2:62775880-62775899 | MS.gene062162:CDS | 50.0% |
| ! | TCTGGACTAATTTGCGGGGA+AGG | - | chr1.2:62775873-62775892 | MS.gene062162:CDS | 50.0% |
| ! | TTTGTTAACGGGTGCCCCTA+GGG | + | chr1.2:62774096-62774115 | None:intergenic | 50.0% |
| !! | AGGGGCACCCGTTAACAAAA+TGG | - | chr1.2:62774097-62774116 | MS.gene062162:CDS | 50.0% |
| !! | CAACCTTTGGGTTGCAAGCT+TGG | - | chr1.2:62774491-62774510 | MS.gene062162:intron | 50.0% |
| !! | GGGGCTTTGAATTCTCCATG+TGG | + | chr1.2:62775558-62775577 | None:intergenic | 50.0% |
| !! | TTGTCTGGAGTAGGCACTGA+GGG | - | chr1.2:62773710-62773729 | MS.gene062162:CDS | 50.0% |
| !! | TTTTGTTAACGGGTGCCCCT+AGG | + | chr1.2:62774097-62774116 | None:intergenic | 50.0% |
| AACGGTACGGCCATGACCAT+CGG | + | chr1.2:62775744-62775763 | None:intergenic | 55.0% | |
| ACGGCCATGACCATCGGTAA+TGG | + | chr1.2:62775738-62775757 | None:intergenic | 55.0% | |
| CATTCCAATGTGGATCGGGG+TGG | - | chr1.2:62775113-62775132 | MS.gene062162:CDS | 55.0% | |
| GCGCTTGTGTGTGTTGTAGG+AGG | - | chr1.2:62773644-62773663 | MS.gene062162:CDS | 55.0% | |
| GGTGTAGTGGCAGCACTTGT+TGG | - | chr1.2:62775348-62775367 | MS.gene062162:intron | 55.0% | |
| TCAGCTGAGGAAACATGCGC+GGG | + | chr1.2:62775179-62775198 | None:intergenic | 55.0% | |
| TGCCCCTACCAGAAACGGTA+CGG | + | chr1.2:62775757-62775776 | None:intergenic | 55.0% | |
| TGGATCGGGGTGGTTGGATA+TGG | - | chr1.2:62775123-62775142 | MS.gene062162:CDS | 55.0% | |
| TGGCATACGAACATCGCCCT+GGG | + | chr1.2:62775456-62775475 | None:intergenic | 55.0% | |
| TTGGCATACGAACATCGCCC+TGG | + | chr1.2:62775457-62775476 | None:intergenic | 55.0% | |
| ! | AAACAGTGCCCCAGGAGCAT+TGG | - | chr1.2:62773955-62773974 | MS.gene062162:CDS | 55.0% |
| ! | AGCACGACTTTTGTGGGAGC+AGG | - | chr1.2:62774638-62774657 | MS.gene062162:CDS | 55.0% |
| ! | CCGCTTGTTGATCGGCGTAA+AGG | - | chr1.2:62774731-62774750 | MS.gene062162:intron | 55.0% |
| ! | GTTGTCTGGAGTAGGCACTG+AGG | - | chr1.2:62773709-62773728 | MS.gene062162:CDS | 55.0% |
| !! | ATGGCCGTACCGTTTCTGGT+AGG | - | chr1.2:62775750-62775769 | MS.gene062162:CDS | 55.0% |
| !! | TGGCCGTACCGTTTCTGGTA+GGG | - | chr1.2:62775751-62775770 | MS.gene062162:CDS | 55.0% |
| ATTGCACACGCACCTCTCCC+AGG | - | chr1.2:62775436-62775455 | MS.gene062162:intron | 60.0% | |
| CCAACCACCCCGATCCACAT+TGG | + | chr1.2:62775120-62775139 | None:intergenic | 60.0% | |
| CCAATGTGGATCGGGGTGGT+TGG | - | chr1.2:62775117-62775136 | MS.gene062162:CDS | 60.0% | |
| GGTCATGGCCGTACCGTTTC+TGG | - | chr1.2:62775746-62775765 | MS.gene062162:CDS | 60.0% | |
| TACGAACATCGCCCTGGGAG+AGG | + | chr1.2:62775451-62775470 | None:intergenic | 60.0% | |
| TTGCACACGCACCTCTCCCA+GGG | - | chr1.2:62775437-62775456 | MS.gene062162:intron | 60.0% | |
| ! | GTGGCAGCACTTGTTGGGTG+TGG | - | chr1.2:62775354-62775373 | MS.gene062162:intron | 60.0% |
| ! | TGCCCCTAGGGCACTCGTTA+AGG | + | chr1.2:62774084-62774103 | None:intergenic | 60.0% |
| !! | GGCCGTACCGTTTCTGGTAG+GGG | - | chr1.2:62775752-62775771 | MS.gene062162:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 62772882 | 62775974 | 62772882 | ID=MS.gene062162 |
| chr1.2 | mRNA | 62772882 | 62775974 | 62772882 | ID=MS.gene062162.t1;Parent=MS.gene062162 |
| chr1.2 | exon | 62775555 | 62775974 | 62775555 | ID=MS.gene062162.t1.exon1;Parent=MS.gene062162.t1 |
| chr1.2 | CDS | 62775555 | 62775974 | 62775555 | ID=cds.MS.gene062162.t1;Parent=MS.gene062162.t1 |
| chr1.2 | exon | 62775021 | 62775193 | 62775021 | ID=MS.gene062162.t1.exon2;Parent=MS.gene062162.t1 |
| chr1.2 | CDS | 62775021 | 62775193 | 62775021 | ID=cds.MS.gene062162.t1;Parent=MS.gene062162.t1 |
| chr1.2 | exon | 62774574 | 62774668 | 62774574 | ID=MS.gene062162.t1.exon3;Parent=MS.gene062162.t1 |
| chr1.2 | CDS | 62774574 | 62774668 | 62774574 | ID=cds.MS.gene062162.t1;Parent=MS.gene062162.t1 |
| chr1.2 | exon | 62774335 | 62774469 | 62774335 | ID=MS.gene062162.t1.exon4;Parent=MS.gene062162.t1 |
| chr1.2 | CDS | 62774335 | 62774469 | 62774335 | ID=cds.MS.gene062162.t1;Parent=MS.gene062162.t1 |
| chr1.2 | exon | 62773930 | 62774234 | 62773930 | ID=MS.gene062162.t1.exon5;Parent=MS.gene062162.t1 |
| chr1.2 | CDS | 62773930 | 62774234 | 62773930 | ID=cds.MS.gene062162.t1;Parent=MS.gene062162.t1 |
| chr1.2 | exon | 62772882 | 62773816 | 62772882 | ID=MS.gene062162.t1.exon6;Parent=MS.gene062162.t1 |
| chr1.2 | CDS | 62772882 | 62773816 | 62772882 | ID=cds.MS.gene062162.t1;Parent=MS.gene062162.t1 |
| Gene Sequence |
| Protein sequence |
