Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062182.t1 | XP_013468851.1 | 91.7 | 768 | 62 | 2 | 1 | 767 | 1 | 767 | 0.00E+00 | 1398.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062182.t1 | Q7XJU0 | 29.5 | 757 | 282 | 20 | 5 | 749 | 1 | 517 | 2.2e-60 | 235.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062182.t1 | A0A072VNC6 | 91.7 | 768 | 62 | 2 | 1 | 767 | 1 | 767 | 0.0e+00 | 1398.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051720 | MS.gene062182 | 0.808789 | 2.61E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062182.t1 | MTR_1g077640 | 91.667 | 768 | 62 | 2 | 1 | 767 | 1 | 767 | 0.0 | 1430 |
| MS.gene062182.t1 | MTR_2g087295 | 56.039 | 207 | 85 | 2 | 554 | 760 | 666 | 866 | 4.30e-67 | 239 |
| MS.gene062182.t1 | MTR_4g051565 | 53.182 | 220 | 94 | 3 | 544 | 760 | 604 | 817 | 6.45e-67 | 238 |
| MS.gene062182.t1 | MTR_4g051565 | 53.182 | 220 | 94 | 3 | 544 | 760 | 692 | 905 | 4.00e-66 | 236 |
| MS.gene062182.t1 | MTR_7g096650 | 46.632 | 193 | 95 | 3 | 560 | 749 | 274 | 461 | 7.89e-48 | 176 |
| MS.gene062182.t1 | MTR_7g096650 | 46.632 | 193 | 95 | 3 | 560 | 749 | 450 | 637 | 2.43e-46 | 176 |
| MS.gene062182.t1 | MTR_7g096650 | 30.380 | 158 | 64 | 6 | 9 | 129 | 5 | 153 | 2.88e-11 | 67.4 |
| MS.gene062182.t1 | MTR_7g096650 | 46.632 | 193 | 95 | 3 | 560 | 749 | 470 | 657 | 2.91e-46 | 176 |
| MS.gene062182.t1 | MTR_7g096650 | 31.515 | 165 | 75 | 4 | 9 | 137 | 5 | 167 | 4.75e-13 | 73.2 |
| MS.gene062182.t1 | MTR_1g070180 | 44.444 | 198 | 104 | 3 | 560 | 754 | 470 | 664 | 4.34e-46 | 175 |
| MS.gene062182.t1 | MTR_1g070180 | 33.750 | 160 | 71 | 4 | 5 | 137 | 1 | 152 | 1.08e-15 | 81.6 |
| MS.gene062182.t1 | MTR_7g063470 | 37.561 | 205 | 116 | 5 | 536 | 740 | 424 | 616 | 1.44e-34 | 140 |
| MS.gene062182.t1 | MTR_7g063470 | 37.561 | 205 | 116 | 5 | 536 | 740 | 474 | 666 | 1.94e-34 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062182.t1 | AT1G06150 | 27.833 | 812 | 445 | 31 | 5 | 753 | 1 | 734 | 2.62e-67 | 237 |
| MS.gene062182.t1 | AT1G06150 | 27.531 | 810 | 448 | 30 | 5 | 753 | 1 | 732 | 1.33e-66 | 235 |
| MS.gene062182.t1 | AT2G27230 | 51.546 | 194 | 77 | 3 | 559 | 750 | 443 | 621 | 1.15e-55 | 202 |
| MS.gene062182.t1 | AT2G27230 | 32.143 | 168 | 83 | 5 | 5 | 143 | 1 | 166 | 3.06e-16 | 83.6 |
| MS.gene062182.t1 | AT2G27230 | 51.546 | 194 | 77 | 3 | 559 | 750 | 443 | 621 | 1.15e-55 | 202 |
| MS.gene062182.t1 | AT2G27230 | 32.143 | 168 | 83 | 5 | 5 | 143 | 1 | 166 | 3.06e-16 | 83.6 |
| MS.gene062182.t1 | AT1G64625 | 51.613 | 186 | 73 | 2 | 565 | 750 | 326 | 494 | 1.70e-54 | 196 |
| MS.gene062182.t1 | AT1G64625 | 42.222 | 135 | 63 | 2 | 5 | 139 | 1 | 120 | 3.77e-24 | 107 |
| MS.gene062182.t1 | AT1G64625 | 51.613 | 186 | 73 | 2 | 565 | 750 | 340 | 508 | 3.20e-54 | 196 |
| MS.gene062182.t1 | AT1G64625 | 44.118 | 136 | 73 | 3 | 5 | 139 | 1 | 134 | 9.52e-25 | 109 |
| MS.gene062182.t1 | AT1G64625 | 51.613 | 186 | 73 | 2 | 565 | 750 | 350 | 518 | 4.72e-54 | 195 |
| MS.gene062182.t1 | AT1G64625 | 40.690 | 145 | 75 | 3 | 5 | 139 | 1 | 144 | 4.09e-23 | 104 |
| MS.gene062182.t1 | AT2G31280 | 46.632 | 193 | 89 | 4 | 558 | 749 | 534 | 713 | 7.97e-44 | 169 |
| MS.gene062182.t1 | AT2G31280 | 34.266 | 143 | 74 | 5 | 13 | 137 | 9 | 149 | 2.90e-18 | 90.1 |
| MS.gene062182.t1 | AT2G31280 | 42.381 | 210 | 90 | 4 | 558 | 749 | 534 | 730 | 4.36e-41 | 161 |
| MS.gene062182.t1 | AT2G31280 | 34.266 | 143 | 74 | 5 | 13 | 137 | 9 | 149 | 3.19e-18 | 90.1 |
| MS.gene062182.t1 | AT2G31280 | 41.500 | 200 | 80 | 4 | 558 | 733 | 506 | 692 | 1.65e-34 | 141 |
| MS.gene062182.t1 | AT2G31280 | 34.959 | 123 | 60 | 4 | 8 | 119 | 30 | 143 | 5.62e-15 | 79.3 |
| MS.gene062182.t1 | AT1G64625 | 44.118 | 136 | 73 | 3 | 5 | 139 | 1 | 134 | 2.96e-25 | 109 |
| MS.gene062182.t1 | AT1G64625 | 60.811 | 74 | 29 | 0 | 566 | 639 | 341 | 414 | 1.15e-22 | 102 |
| MS.gene062182.t1 | AT5G24352 | 51.250 | 80 | 33 | 2 | 60 | 139 | 4 | 77 | 2.00e-15 | 72.4 |
| MS.gene062182.t1 | AT5G24352 | 45.000 | 80 | 30 | 1 | 60 | 139 | 4 | 69 | 1.86e-13 | 66.2 |
Find 136 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATACCTACTTGTAATTT+TGG | 0.045446 | 1.1:-58174848 | None:intergenic |
| CGCCGTACTAACCTTATTTC+TGG | 0.106368 | 1.1:-58172878 | None:intergenic |
| TTCTTCTTGTTGGGCCTTGC+AGG | 0.149105 | 1.1:-58174938 | None:intergenic |
| TGGCAATGTCTCTTAGTTTA+AGG | 0.165018 | 1.1:+58171793 | MS.gene062182:CDS |
| TTCTTTCTTCAGGATGATTC+TGG | 0.170932 | 1.1:+58172578 | MS.gene062182:intron |
| CTTAAGACTCTTTGTGCTTA+TGG | 0.174159 | 1.1:+58171822 | MS.gene062182:CDS |
| TTCATGTCCTCAACTATAAT+TGG | 0.194549 | 1.1:-58175527 | None:intergenic |
| AGATACCATAGAAGCTTTAT+TGG | 0.197455 | 1.1:+58173908 | MS.gene062182:CDS |
| TCGACATAATTCGAGGTTTC+GGG | 0.239172 | 1.1:+58175695 | MS.gene062182:CDS |
| ATTGACCTCATTGCAAAATA+TGG | 0.246518 | 1.1:+58174091 | MS.gene062182:CDS |
| TCAAAATTAGAACTATTAAA+AGG | 0.258952 | 1.1:-58174656 | None:intergenic |
| TGAATCTGCTGCCGATCTTT+TGG | 0.266071 | 1.1:-58174992 | None:intergenic |
| TAGTTTACCTTTGGCTCATT+AGG | 0.268155 | 1.1:-58175297 | None:intergenic |
| TAATTCAGAGAATGATTTCT+TGG | 0.285374 | 1.1:+58174421 | MS.gene062182:CDS |
| TTTCCTAGTTAAAACACTAT+TGG | 0.288077 | 1.1:-58174816 | None:intergenic |
| CGGCATAGCCTTCTTCTTGT+TGG | 0.293886 | 1.1:-58174948 | None:intergenic |
| TTGATGAAAGCGCCAGAAAA+TGG | 0.296120 | 1.1:-58171862 | None:intergenic |
| AAACTTCTCTCAGATCTTCA+TGG | 0.320954 | 1.1:-58173818 | None:intergenic |
| AACATACTATGAAGAGCAAT+TGG | 0.325842 | 1.1:+58172014 | MS.gene062182:CDS |
| GAATCGATTGCGGCGGTGTT+TGG | 0.331696 | 1.1:-58176035 | None:intergenic |
| CTTCTATGGTATCTTTGAAT+TGG | 0.334452 | 1.1:-58173899 | None:intergenic |
| CCTCTGAAAATTCATGCAAT+TGG | 0.338658 | 1.1:+58173769 | MS.gene062182:CDS |
| ATTCTCCTCTGGGATAATTA+AGG | 0.340496 | 1.1:+58172613 | MS.gene062182:CDS |
| GTCGACATAATTCGAGGTTT+CGG | 0.344451 | 1.1:+58175694 | MS.gene062182:CDS |
| AGGCTCCAATAAAGCTTCTA+TGG | 0.353011 | 1.1:-58173913 | None:intergenic |
| GGCATAGCCTTCTTCTTGTT+GGG | 0.357712 | 1.1:-58174947 | None:intergenic |
| TGCTTACCTCTATAAGCATT+TGG | 0.365462 | 1.1:-58175559 | None:intergenic |
| AAACAAGGAAGAAGAAACTA+TGG | 0.366561 | 1.1:+58175743 | MS.gene062182:CDS |
| CAATCTTAAGAGGGCCGTTC+CGG | 0.367185 | 1.1:+58174892 | MS.gene062182:CDS |
| AATCCTACTTGCACTGATCT+TGG | 0.367857 | 1.1:+58174365 | MS.gene062182:CDS |
| ACAGTTTGGATCCAGAAATA+AGG | 0.379457 | 1.1:+58172867 | MS.gene062182:CDS |
| GAAACAGAATGCATCAAGTT+TGG | 0.380910 | 1.1:-58174779 | None:intergenic |
| TAATTGGACATACCATTGTT+TGG | 0.385344 | 1.1:-58175511 | None:intergenic |
| AAAAGGTTATTCTCAGAGTT+AGG | 0.388146 | 1.1:+58174593 | MS.gene062182:CDS |
| CTTTCACAGGCAAGCATAGT+TGG | 0.406506 | 1.1:+58172463 | MS.gene062182:CDS |
| GAAATAGCATCAATCTTAAG+AGG | 0.411422 | 1.1:+58174882 | MS.gene062182:CDS |
| TTGTATCAACAATTCTCCTC+TGG | 0.414500 | 1.1:+58172602 | MS.gene062182:CDS |
| TTTACAAATGATGATCTCAA+TGG | 0.419506 | 1.1:+58173729 | MS.gene062182:CDS |
| CAGATTCTTTGTGAAGATCA+AGG | 0.422973 | 1.1:+58175655 | MS.gene062182:intron |
| GATAGCACAGAATTTGATCT+AGG | 0.425673 | 1.1:+58174443 | MS.gene062182:CDS |
| TGACAAGGATAGATGTGTTT+TGG | 0.431834 | 1.1:+58175988 | MS.gene062182:CDS |
| CAACAAGAAGAAGGCTATGC+CGG | 0.433387 | 1.1:+58174949 | MS.gene062182:CDS |
| AGTTCCACAAGTGCATTTGC+TGG | 0.444799 | 1.1:+58172056 | MS.gene062182:CDS |
| TTGAAACCACTTCATTTGCT+TGG | 0.446521 | 1.1:-58175427 | None:intergenic |
| ACTCTTTGTGCTTATGGTGA+TGG | 0.454319 | 1.1:+58171828 | MS.gene062182:CDS |
| AGCAGTGTGTTTGAACTTGA+TGG | 0.467700 | 1.1:-58174176 | None:intergenic |
| GTTGCATTCAGTTAGTTATG+AGG | 0.477237 | 1.1:+58172485 | MS.gene062182:CDS |
| GTCTAGTTTCAGTTCCATCA+AGG | 0.482359 | 1.1:-58174757 | None:intergenic |
| AAGTTGTTCATAGAAGAGTT+AGG | 0.482558 | 1.1:-58173933 | None:intergenic |
| TTACAAATGATGATCTCAAT+GGG | 0.485898 | 1.1:+58173730 | MS.gene062182:CDS |
| AGTATTATCGGTCGGTGTAC+CGG | 0.486177 | 1.1:-58174567 | None:intergenic |
| ACCTGGCCAAATGCTTATAG+AGG | 0.487487 | 1.1:+58175553 | MS.gene062182:CDS |
| GAGATAGTCGACATAATTCG+AGG | 0.500502 | 1.1:+58175688 | MS.gene062182:CDS |
| CTGCAGATACTAGTATTCTC+TGG | 0.501249 | 1.1:-58174296 | None:intergenic |
| GTTGGTGAAGCTGCTTTCAC+AGG | 0.504064 | 1.1:+58172450 | MS.gene062182:CDS |
| AACAAGAAGAAGGCTATGCC+GGG | 0.505594 | 1.1:+58174950 | MS.gene062182:CDS |
| TTTGTGCTTATGGTGATGGT+TGG | 0.507534 | 1.1:+58171832 | MS.gene062182:CDS |
| GATGCATTCTGTTTCTGACT+TGG | 0.511688 | 1.1:+58174787 | MS.gene062182:CDS |
| GTTTCAAATGGCAATGGCAA+TGG | 0.514892 | 1.1:+58171773 | None:intergenic |
| CGATCAAGGCAGTGAATGGT+GGG | 0.517153 | 1.1:+58174469 | MS.gene062182:CDS |
| AAAATTACAAGTAGGTATGT+TGG | 0.519009 | 1.1:+58174850 | MS.gene062182:CDS |
| CAAGTGCATTTGCTGGGTGA+AGG | 0.521762 | 1.1:+58172063 | MS.gene062182:CDS |
| TGTATCAACAATTCTCCTCT+GGG | 0.522588 | 1.1:+58172603 | MS.gene062182:CDS |
| TTCTGATTTGTAGACAATTG+TGG | 0.525251 | 1.1:+58172816 | MS.gene062182:intron |
| AATACCCTTTCTGAATCAGT+AGG | 0.526262 | 1.1:+58174338 | MS.gene062182:CDS |
| GCAGATGTTTCAACATATGT+TGG | 0.527150 | 1.1:+58174047 | MS.gene062182:CDS |
| CCATGGATGATCTTTGCCAA+TGG | 0.527628 | 1.1:+58174261 | MS.gene062182:CDS |
| CTGCAGAACAATGATTCAGT+TGG | 0.528963 | 1.1:+58174313 | MS.gene062182:CDS |
| TAAACCCTACTGATTCAGAA+AGG | 0.532405 | 1.1:-58174343 | None:intergenic |
| ACCACTCCACATGCATTGAC+AGG | 0.532656 | 1.1:-58172844 | None:intergenic |
| TGTACTTGATTTCTATTCAG+AGG | 0.532995 | 1.1:-58174725 | None:intergenic |
| ACCTCTATAAGCATTTGGCC+AGG | 0.533166 | 1.1:-58175554 | None:intergenic |
| GCATGTGGAGTGGTACAGTT+TGG | 0.534769 | 1.1:+58172853 | MS.gene062182:CDS |
| ACATACTATGAAGAGCAATT+GGG | 0.535612 | 1.1:+58172015 | MS.gene062182:CDS |
| AGTTCAAACACACTGCTACA+TGG | 0.538271 | 1.1:+58174182 | MS.gene062182:CDS |
| TTTGATCTAGGATGCGATCA+AGG | 0.540938 | 1.1:+58174455 | MS.gene062182:CDS |
| GCGATCAAGGCAGTGAATGG+TGG | 0.541214 | 1.1:+58174468 | MS.gene062182:CDS |
| ATGGGCACACTTTATTGTTG+AGG | 0.543756 | 1.1:+58175762 | MS.gene062182:CDS |
| TGCAAGGCCCAACAAGAAGA+AGG | 0.544909 | 1.1:+58174940 | MS.gene062182:CDS |
| GATGCGATCAAGGCAGTGAA+TGG | 0.546126 | 1.1:+58174465 | MS.gene062182:CDS |
| TTCTTATAGGTTGTTGAATG+TGG | 0.548498 | 1.1:+58171987 | MS.gene062182:intron |
| TGATATGCATTCAGAAAAGC+CGG | 0.554383 | 1.1:-58174534 | None:intergenic |
| TGCATATCAGAGTTGAATAC+CGG | 0.557263 | 1.1:+58174548 | MS.gene062182:CDS |
| AGTTTGCTCAAGGAGATAAA+CGG | 0.559704 | 1.1:+58173660 | MS.gene062182:CDS |
| GTTCCACAAGTGCATTTGCT+GGG | 0.559901 | 1.1:+58172057 | MS.gene062182:CDS |
| AAGTGCATTTGCTGGGTGAA+GGG | 0.560058 | 1.1:+58172064 | MS.gene062182:CDS |
| TCACCCAGCAAATGCACTTG+TGG | 0.560379 | 1.1:-58172060 | None:intergenic |
| ATCAAGGCAGTGAATGGTGG+GGG | 0.566879 | 1.1:+58174471 | MS.gene062182:CDS |
| CATTTACCTTTCCACCATGA+GGG | 0.569892 | 1.1:-58175045 | None:intergenic |
| TATTGACCAAGCAAATGAAG+TGG | 0.571314 | 1.1:+58175421 | MS.gene062182:CDS |
| TCCACATGCATTGACAGGTA+TGG | 0.573054 | 1.1:-58172839 | None:intergenic |
| CTGGTGAAGGAGCAAACCAT+TGG | 0.573156 | 1.1:-58174277 | None:intergenic |
| AAACCCTACTGATTCAGAAA+GGG | 0.573769 | 1.1:-58174342 | None:intergenic |
| CGTGGCTTAGTGCTCTCCCC+CGG | 0.578572 | 1.1:-58174968 | None:intergenic |
| CAGATGTTTCTATCTCAGCT+AGG | 0.579045 | 1.1:-58174388 | None:intergenic |
| CCATTGGCAAAGATCATCCA+TGG | 0.579310 | 1.1:-58174261 | None:intergenic |
| AATCTCTAATAGCTTAGAGC+TGG | 0.582531 | 1.1:+58174205 | MS.gene062182:CDS |
| ATACTAGTATTCTCTGGTGA+AGG | 0.583160 | 1.1:-58174290 | None:intergenic |
| ATACCCTTTCTGAATCAGTA+GGG | 0.583689 | 1.1:+58174339 | MS.gene062182:CDS |
| CGACCGATAATACTCGGAAA+AGG | 0.586417 | 1.1:+58174576 | MS.gene062182:CDS |
| TCAGTAGCAGCACTCACCAC+TGG | 0.587773 | 1.1:-58174506 | None:intergenic |
| AGTGCTGCTACTGATAATAC+CGG | 0.588267 | 1.1:+58174515 | MS.gene062182:CDS |
| ATTGACATGATAGACGAGTC+GGG | 0.589591 | 1.1:+58173684 | MS.gene062182:CDS |
| TAAGAAAAGCATGTATCTGA+TGG | 0.589820 | 1.1:-58175238 | None:intergenic |
| TATTGACATGATAGACGAGT+CGG | 0.590871 | 1.1:+58173683 | MS.gene062182:CDS |
| CTAAGCCACGACCAAAAGAT+CGG | 0.592478 | 1.1:+58174981 | MS.gene062182:CDS |
| GGTATGTCCAATTATAGTTG+AGG | 0.593244 | 1.1:+58175520 | MS.gene062182:CDS |
| TCATTTACCTTTCCACCATG+AGG | 0.593811 | 1.1:-58175046 | None:intergenic |
| GAATTATGTCGACTATCTCA+AGG | 0.595980 | 1.1:-58175684 | None:intergenic |
| ACTTGATTTCTATTCAGAGG+TGG | 0.603434 | 1.1:-58174722 | None:intergenic |
| ACAAGATCCTAATGAGCCAA+AGG | 0.603811 | 1.1:+58175290 | MS.gene062182:CDS |
| TCAAACACAAAGTTTGCTCA+AGG | 0.604093 | 1.1:+58173650 | MS.gene062182:CDS |
| CATCATCCCTCATGGTGGAA+AGG | 0.604328 | 1.1:+58175039 | MS.gene062182:CDS |
| TTGAGAGGCATCATCCCTCA+TGG | 0.609799 | 1.1:+58175031 | MS.gene062182:CDS |
| AGGCCAAGATCAGTGCAAGT+AGG | 0.619336 | 1.1:-58174368 | None:intergenic |
| AAATAGCATCAATCTTAAGA+GGG | 0.621188 | 1.1:+58174883 | MS.gene062182:CDS |
| ACATTCCCAAAATTACAAGT+AGG | 0.634399 | 1.1:+58174842 | MS.gene062182:CDS |
| GGGGAATTTACTTACACCAG+TGG | 0.641933 | 1.1:+58174490 | MS.gene062182:CDS |
| GTACACCGACCGATAATACT+CGG | 0.642082 | 1.1:+58174570 | MS.gene062182:CDS |
| GCCATACCTGTCAATGCATG+TGG | 0.646922 | 1.1:+58172838 | MS.gene062182:CDS |
| AACAAGGAAGAAGAAACTAT+GGG | 0.646988 | 1.1:+58175744 | MS.gene062182:CDS |
| TGAAGTAACAAACCAAACAA+TGG | 0.651573 | 1.1:+58175499 | MS.gene062182:CDS |
| GATCAAGGCAGTGAATGGTG+GGG | 0.652349 | 1.1:+58174470 | MS.gene062182:CDS |
| CAAATGCCCATGTAGCACCA+TGG | 0.653340 | 1.1:-58175478 | None:intergenic |
| GTTGAGGACATGAAATCACC+TGG | 0.653629 | 1.1:+58175536 | MS.gene062182:CDS |
| GACTGTATTAAAGAGTTGAG+AGG | 0.653803 | 1.1:+58175016 | MS.gene062182:CDS |
| AAAGCATGTATCTGATGGTG+CGG | 0.658164 | 1.1:-58175233 | None:intergenic |
| ACAAGAAGAAGGCTATGCCG+GGG | 0.662638 | 1.1:+58174951 | MS.gene062182:CDS |
| TAGTACCTTAATTATCCCAG+AGG | 0.667387 | 1.1:-58172618 | None:intergenic |
| CTTATTAGAAGAATCGATTG+CGG | 0.673781 | 1.1:-58176045 | None:intergenic |
| ATTAGAAGAATCGATTGCGG+CGG | 0.681138 | 1.1:-58176042 | None:intergenic |
| ACCTGTCAATGCATGTGGAG+TGG | 0.681660 | 1.1:+58172843 | MS.gene062182:CDS |
| AGAGGCATCATCCCTCATGG+TGG | 0.689375 | 1.1:+58175034 | MS.gene062182:CDS |
| CAAGAAGAAGGCTATGCCGG+GGG | 0.691389 | 1.1:+58174952 | MS.gene062182:CDS |
| AGGCGAATAGACATGTGACA+AGG | 0.714830 | 1.1:+58175973 | MS.gene062182:CDS |
| GGTTTCAAAAGACAACAATG+TGG | 0.775901 | 1.1:+58175442 | MS.gene062182:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTAATTTGATAAAGTT+AGG | + | chr1.1:58172335-58172354 | MS.gene062182:intron | 10.0% |
| !!! | AATTTTTGTAACTATATAAT+TGG | + | chr1.1:58172110-58172129 | MS.gene062182:intron | 10.0% |
| !!! | TCTAAAATAAAACAAATAAA+TGG | + | chr1.1:58175811-58175830 | MS.gene062182:intron | 10.0% |
| !! | AAAATAAAACAAATAAATGG+TGG | + | chr1.1:58175814-58175833 | MS.gene062182:intron | 15.0% |
| !! | AATAAAAGAAAAACTTACAT+AGG | - | chr1.1:58171894-58171913 | None:intergenic | 15.0% |
| !! | AGTTATTATTACAATTGATT+TGG | - | chr1.1:58172710-58172729 | None:intergenic | 15.0% |
| !! | TCAAAATTAGAACTATTAAA+AGG | - | chr1.1:58174659-58174678 | None:intergenic | 15.0% |
| !!! | ATTATTTTATCTAGAATTGT+TGG | + | chr1.1:58172432-58172451 | MS.gene062182:intron | 15.0% |
| !!! | TTAATTTTTGTGAAAATTAG+AGG | - | chr1.1:58172323-58172342 | None:intergenic | 15.0% |
| !! | AAACCATATACATTCTTATT+CGG | - | chr1.1:58175586-58175605 | None:intergenic | 20.0% |
| !! | AAGTTAAAACAAGAGAAAAA+TGG | - | chr1.1:58172547-58172566 | None:intergenic | 20.0% |
| !! | ACTCATTAATGAAAAAACAA+AGG | + | chr1.1:58172393-58172412 | MS.gene062182:intron | 20.0% |
| !! | ATTACATGTAAGCAAAATTA+TGG | - | chr1.1:58172670-58172689 | None:intergenic | 20.0% |
| !! | TCAAATAATCATACTTAATG+TGG | - | chr1.1:58172750-58172769 | None:intergenic | 20.0% |
| !! | TCTACTTAAGATAAAAATGT+TGG | + | chr1.1:58175872-58175891 | MS.gene062182:intron | 20.0% |
| !!! | AAAATCTTGTTTTGATTCAT+TGG | + | chr1.1:58173986-58174005 | MS.gene062182:CDS | 20.0% |
| ! | AAAATTACAAGTAGGTATGT+TGG | + | chr1.1:58174850-58174869 | MS.gene062182:CDS | 25.0% |
| ! | AAATAGCATCAATCTTAAGA+GGG | + | chr1.1:58174883-58174902 | MS.gene062182:CDS | 25.0% |
| ! | AAGAGTAAATTAGTGAACAA+TGG | - | chr1.1:58172280-58172299 | None:intergenic | 25.0% |
| ! | ACTGAACTTCAAAAATTCTT+CGG | - | chr1.1:58174240-58174259 | None:intergenic | 25.0% |
| ! | ATCATCAAATAAAAAGCAGA+TGG | + | chr1.1:58174691-58174710 | MS.gene062182:CDS | 25.0% |
| ! | GAATATCTTGAAAGCAAAAA+TGG | + | chr1.1:58175720-58175739 | MS.gene062182:CDS | 25.0% |
| ! | TAATGAGTAAGTACATTTAG+AGG | - | chr1.1:58172381-58172400 | None:intergenic | 25.0% |
| ! | TAATTCAGAGAATGATTTCT+TGG | + | chr1.1:58174421-58174440 | MS.gene062182:CDS | 25.0% |
| ! | TCAACATGTAAAGAGATATA+GGG | - | chr1.1:58173246-58173265 | None:intergenic | 25.0% |
| ! | TCTTGAAGACAGAAAAAATA+TGG | - | chr1.1:58172208-58172227 | None:intergenic | 25.0% |
| ! | TTACAAATGATGATCTCAAT+GGG | + | chr1.1:58173730-58173749 | MS.gene062182:CDS | 25.0% |
| ! | TTAGCATAATATAGAGAATC+AGG | + | chr1.1:58173392-58173411 | MS.gene062182:intron | 25.0% |
| ! | TTCAACATGTAAAGAGATAT+AGG | - | chr1.1:58173247-58173266 | None:intergenic | 25.0% |
| ! | TTTAACCGATTGAATAATCT+AGG | - | chr1.1:58173543-58173562 | None:intergenic | 25.0% |
| ! | TTTACAAATGATGATCTCAA+TGG | + | chr1.1:58173729-58173748 | MS.gene062182:CDS | 25.0% |
| ! | TTTCCTAGTTAAAACACTAT+TGG | - | chr1.1:58174819-58174838 | None:intergenic | 25.0% |
| !! | AACATACCTACTTGTAATTT+TGG | - | chr1.1:58174851-58174870 | None:intergenic | 25.0% |
| !! | ACATACCTACTTGTAATTTT+GGG | - | chr1.1:58174850-58174869 | None:intergenic | 25.0% |
| !! | CTTGAATTTTCTGTTCTTAT+AGG | + | chr1.1:58171974-58171993 | MS.gene062182:intron | 25.0% |
| !! | TAGTTTAGTTAGTTTACCTT+TGG | - | chr1.1:58175309-58175328 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | - | chr1.1:58173054-58173073 | None:intergenic | 25.0% |
| !!! | GGTTGAATGAAGAATTTTTT+TGG | - | chr1.1:58175126-58175145 | None:intergenic | 25.0% |
| !!! | TGAAGAATTTTTTTGGAAGT+TGG | - | chr1.1:58175119-58175138 | None:intergenic | 25.0% |
| !!! | TTTTTTGGAAGTTGGAAATT+TGG | - | chr1.1:58175111-58175130 | None:intergenic | 25.0% |
| AAAAGGTTATTCTCAGAGTT+AGG | + | chr1.1:58174593-58174612 | MS.gene062182:CDS | 30.0% | |
| AAACAAGGAAGAAGAAACTA+TGG | + | chr1.1:58175743-58175762 | MS.gene062182:CDS | 30.0% | |
| AAATTGTAGCTCATATCTGA+AGG | - | chr1.1:58175147-58175166 | None:intergenic | 30.0% | |
| AACAAGGAAGAAGAAACTAT+GGG | + | chr1.1:58175744-58175763 | MS.gene062182:CDS | 30.0% | |
| AACATACTATGAAGAGCAAT+TGG | + | chr1.1:58172014-58172033 | MS.gene062182:CDS | 30.0% | |
| AAGTTGTTCATAGAAGAGTT+AGG | - | chr1.1:58173936-58173955 | None:intergenic | 30.0% | |
| ACATACTATGAAGAGCAATT+GGG | + | chr1.1:58172015-58172034 | MS.gene062182:CDS | 30.0% | |
| ACATTCCCAAAATTACAAGT+AGG | + | chr1.1:58174842-58174861 | MS.gene062182:CDS | 30.0% | |
| AGAATTTCCTTTCTTTCTTC+AGG | + | chr1.1:58172568-58172587 | MS.gene062182:intron | 30.0% | |
| ATCATACTTAATGTGGTATC+AGG | - | chr1.1:58172743-58172762 | None:intergenic | 30.0% | |
| ATCCAGAAATAAGGTTAGTA+CGG | + | chr1.1:58172876-58172895 | MS.gene062182:intron | 30.0% | |
| ATTGACCTCATTGCAAAATA+TGG | + | chr1.1:58174091-58174110 | MS.gene062182:CDS | 30.0% | |
| CAACCGAATAAGAATGTATA+TGG | + | chr1.1:58175580-58175599 | MS.gene062182:intron | 30.0% | |
| CTTATTAGAAGAATCGATTG+CGG | - | chr1.1:58176048-58176067 | None:intergenic | 30.0% | |
| CTTCACCTAGATTATTCAAT+CGG | + | chr1.1:58173535-58173554 | MS.gene062182:intron | 30.0% | |
| CTTCTATGGTATCTTTGAAT+TGG | - | chr1.1:58173902-58173921 | None:intergenic | 30.0% | |
| GAAATAGCATCAATCTTAAG+AGG | + | chr1.1:58174882-58174901 | MS.gene062182:CDS | 30.0% | |
| GGTACTAAAATTCATCAACA+AGG | + | chr1.1:58172634-58172653 | MS.gene062182:intron | 30.0% | |
| TAATTGGACATACCATTGTT+TGG | - | chr1.1:58175514-58175533 | None:intergenic | 30.0% | |
| TCAAATAAGCCAATCCAAAT+AGG | + | chr1.1:58173220-58173239 | MS.gene062182:intron | 30.0% | |
| TCTTTCTTGTTCAAAACTGT+TGG | + | chr1.1:58172773-58172792 | MS.gene062182:intron | 30.0% | |
| TGAAAGCAAAAATGGAAACA+AGG | + | chr1.1:58175728-58175747 | MS.gene062182:CDS | 30.0% | |
| TGAAGTAACAAACCAAACAA+TGG | + | chr1.1:58175499-58175518 | MS.gene062182:CDS | 30.0% | |
| TGACATGATGCAAATCAATT+TGG | + | chr1.1:58172917-58172936 | MS.gene062182:intron | 30.0% | |
| TGTACTTGATTTCTATTCAG+AGG | - | chr1.1:58174728-58174747 | None:intergenic | 30.0% | |
| TTCATGTCCTCAACTATAAT+TGG | - | chr1.1:58175530-58175549 | None:intergenic | 30.0% | |
| TTCTACTTTCAATTGCTCTT+CGG | - | chr1.1:58173334-58173353 | None:intergenic | 30.0% | |
| TTCTTATAGGTTGTTGAATG+TGG | + | chr1.1:58171987-58172006 | MS.gene062182:intron | 30.0% | |
| ! | AGATACCATAGAAGCTTTAT+TGG | + | chr1.1:58173908-58173927 | MS.gene062182:CDS | 30.0% |
| ! | AGCTTTGTACTAATTTCCAT+CGG | + | chr1.1:58172141-58172160 | MS.gene062182:intron | 30.0% |
| ! | CAAGATTTTTCACCAAAAAG+AGG | - | chr1.1:58173975-58173994 | None:intergenic | 30.0% |
| ! | GATCTAAGTCTATTTTCACT+CGG | + | chr1.1:58172253-58172272 | MS.gene062182:intron | 30.0% |
| ! | GTCACTATCAGAAATCATTT+TGG | + | chr1.1:58175375-58175394 | MS.gene062182:intron | 30.0% |
| ! | TAACCTTTTCCGAGTATTAT+CGG | - | chr1.1:58174582-58174601 | None:intergenic | 30.0% |
| ! | TAAGAAAAGCATGTATCTGA+TGG | - | chr1.1:58175241-58175260 | None:intergenic | 30.0% |
| ! | TCCAAAAATACTCCTCTTTT+TGG | + | chr1.1:58173960-58173979 | MS.gene062182:CDS | 30.0% |
| ! | TCTATCCATATTTTGCAATG+AGG | - | chr1.1:58174099-58174118 | None:intergenic | 30.0% |
| ! | TTCTGATTTGTAGACAATTG+TGG | + | chr1.1:58172816-58172835 | MS.gene062182:intron | 30.0% |
| !!! | ACCAAAAAGAGGAGTATTTT+TGG | - | chr1.1:58173964-58173983 | None:intergenic | 30.0% |
| !!! | AGTCCAATAGTGTTTTAACT+AGG | + | chr1.1:58174813-58174832 | MS.gene062182:CDS | 30.0% |
| !!! | ATTTTTGAAGTTCAGTTCCA+TGG | + | chr1.1:58174244-58174263 | MS.gene062182:CDS | 30.0% |
| !!! | TTTGGAGACAACAGATTTTT+TGG | + | chr1.1:58173626-58173645 | MS.gene062182:CDS | 30.0% |
| AAACTTCTCTCAGATCTTCA+TGG | - | chr1.1:58173821-58173840 | None:intergenic | 35.0% | |
| AAAGAGATATAGGGCCTATT+TGG | - | chr1.1:58173237-58173256 | None:intergenic | 35.0% | |
| AATACCCTTTCTGAATCAGT+AGG | + | chr1.1:58174338-58174357 | MS.gene062182:CDS | 35.0% | |
| AATCTCTAATAGCTTAGAGC+TGG | + | chr1.1:58174205-58174224 | MS.gene062182:CDS | 35.0% | |
| ACAGAATTATGAAGCTTGCA+AGG | - | chr1.1:58173018-58173037 | None:intergenic | 35.0% | |
| ACAGTTTGGATCCAGAAATA+AGG | + | chr1.1:58172867-58172886 | MS.gene062182:CDS | 35.0% | |
| ACTTGATTTCTATTCAGAGG+TGG | - | chr1.1:58174725-58174744 | None:intergenic | 35.0% | |
| ATACCCTTTCTGAATCAGTA+GGG | + | chr1.1:58174339-58174358 | MS.gene062182:CDS | 35.0% | |
| ATACTAGTATTCTCTGGTGA+AGG | - | chr1.1:58174293-58174312 | None:intergenic | 35.0% | |
| CAGATTCTTTGTGAAGATCA+AGG | + | chr1.1:58175655-58175674 | MS.gene062182:intron | 35.0% | |
| CGTCTAATATATTGTACAGC+AGG | + | chr1.1:58175953-58175972 | MS.gene062182:intron | 35.0% | |
| CTGATCAGTGTTTCAGAATT+CGG | + | chr1.1:58172942-58172961 | MS.gene062182:intron | 35.0% | |
| CTTAAGACTCTTTGTGCTTA+TGG | + | chr1.1:58171822-58171841 | MS.gene062182:CDS | 35.0% | |
| GAAACAGAATGCATCAAGTT+TGG | - | chr1.1:58174782-58174801 | None:intergenic | 35.0% | |
| GAATCATCCTGAAGAAAGAA+AGG | - | chr1.1:58172578-58172597 | None:intergenic | 35.0% | |
| GACTGTATTAAAGAGTTGAG+AGG | + | chr1.1:58175016-58175035 | MS.gene062182:CDS | 35.0% | |
| GATAGCACAGAATTTGATCT+AGG | + | chr1.1:58174443-58174462 | MS.gene062182:CDS | 35.0% | |
| GATTCAGATTAAGCCATGTT+TGG | + | chr1.1:58173038-58173057 | MS.gene062182:intron | 35.0% | |
| GCAGATGTTTCAACATATGT+TGG | + | chr1.1:58174047-58174066 | MS.gene062182:CDS | 35.0% | |
| GGTATGTCCAATTATAGTTG+AGG | + | chr1.1:58175520-58175539 | MS.gene062182:CDS | 35.0% | |
| GGTTTCAAAAGACAACAATG+TGG | + | chr1.1:58175442-58175461 | MS.gene062182:CDS | 35.0% | |
| GTGGTAGATAACAAAAACCA+TGG | + | chr1.1:58175461-58175480 | MS.gene062182:CDS | 35.0% | |
| GTTGCATTCAGTTAGTTATG+AGG | + | chr1.1:58172485-58172504 | MS.gene062182:CDS | 35.0% | |
| TAGTACCTTAATTATCCCAG+AGG | - | chr1.1:58172621-58172640 | None:intergenic | 35.0% | |
| TATTGACATGATAGACGAGT+CGG | + | chr1.1:58173683-58173702 | MS.gene062182:CDS | 35.0% | |
| TATTGACCAAGCAAATGAAG+TGG | + | chr1.1:58175421-58175440 | MS.gene062182:CDS | 35.0% | |
| TCAAGCATGCAAGTAATCTA+AGG | - | chr1.1:58171959-58171978 | None:intergenic | 35.0% | |
| TGAGTAAGTACATTTAGAGG+AGG | - | chr1.1:58172378-58172397 | None:intergenic | 35.0% | |
| TGATATGCATTCAGAAAAGC+CGG | - | chr1.1:58174537-58174556 | None:intergenic | 35.0% | |
| TGCACGCAGAAATATTCTTA+GGG | + | chr1.1:58173457-58173476 | MS.gene062182:intron | 35.0% | |
| TGCATATCAGAGTTGAATAC+CGG | + | chr1.1:58174548-58174567 | MS.gene062182:CDS | 35.0% | |
| TGCTTACCTCTATAAGCATT+TGG | - | chr1.1:58175562-58175581 | None:intergenic | 35.0% | |
| TGGCAATGTCTCTTAGTTTA+AGG | + | chr1.1:58171793-58171812 | MS.gene062182:CDS | 35.0% | |
| TGTATCAACAATTCTCCTCT+GGG | + | chr1.1:58172603-58172622 | MS.gene062182:CDS | 35.0% | |
| TTCAATTGCTCTTCGGATAT+AGG | - | chr1.1:58173327-58173346 | None:intergenic | 35.0% | |
| TTCTTTCTTCAGGATGATTC+TGG | + | chr1.1:58172578-58172597 | MS.gene062182:intron | 35.0% | |
| TTGAAACCACTTCATTTGCT+TGG | - | chr1.1:58175430-58175449 | None:intergenic | 35.0% | |
| TTGCACGCAGAAATATTCTT+AGG | + | chr1.1:58173456-58173475 | MS.gene062182:intron | 35.0% | |
| TTGTATCAACAATTCTCCTC+TGG | + | chr1.1:58172602-58172621 | MS.gene062182:CDS | 35.0% | |
| ! | AGATACATGCTTTTCTTACG+CGG | + | chr1.1:58175243-58175262 | MS.gene062182:CDS | 35.0% |
| ! | AGTTTGCTCAAGGAGATAAA+CGG | + | chr1.1:58173660-58173679 | MS.gene062182:CDS | 35.0% |
| ! | CATGCTAACAAATGTTTTCC+TGG | + | chr1.1:58175179-58175198 | MS.gene062182:intron | 35.0% |
| ! | CCAATTGCATGAATTTTCAG+AGG | - | chr1.1:58173772-58173791 | None:intergenic | 35.0% |
| ! | CCTCTGAAAATTCATGCAAT+TGG | + | chr1.1:58173769-58173788 | MS.gene062182:CDS | 35.0% |
| ! | GAATTATGTCGACTATCTCA+AGG | - | chr1.1:58175687-58175706 | None:intergenic | 35.0% |
| ! | GCATGAATTTTCAGAGGAAA+TGG | - | chr1.1:58173766-58173785 | None:intergenic | 35.0% |
| ! | GTACATTTTGCAAACCTTGA+TGG | + | chr1.1:58174743-58174762 | MS.gene062182:CDS | 35.0% |
| ! | TAGTTTACCTTTGGCTCATT+AGG | - | chr1.1:58175300-58175319 | None:intergenic | 35.0% |
| ! | TCAAACACAAAGTTTGCTCA+AGG | + | chr1.1:58173650-58173669 | MS.gene062182:CDS | 35.0% |
| ! | TGACAAGGATAGATGTGTTT+TGG | + | chr1.1:58175988-58176007 | MS.gene062182:CDS | 35.0% |
| !! | AAACCCTACTGATTCAGAAA+GGG | - | chr1.1:58174345-58174364 | None:intergenic | 35.0% |
| !! | ATTCTCCTCTGGGATAATTA+AGG | + | chr1.1:58172613-58172632 | MS.gene062182:CDS | 35.0% |
| !! | TAAACCCTACTGATTCAGAA+AGG | - | chr1.1:58174346-58174365 | None:intergenic | 35.0% |
| !!! | TCCAATTTTTTAGGGTGTAC+CGG | - | chr1.1:58174914-58174933 | None:intergenic | 35.0% |
| ACAAGATCCTAATGAGCCAA+AGG | + | chr1.1:58175290-58175309 | MS.gene062182:CDS | 40.0% | |
| ACTCTTTGTGCTTATGGTGA+TGG | + | chr1.1:58171828-58171847 | MS.gene062182:CDS | 40.0% | |
| AGCAGTGTGTTTGAACTTGA+TGG | - | chr1.1:58174179-58174198 | None:intergenic | 40.0% | |
| AGGCTCCAATAAAGCTTCTA+TGG | - | chr1.1:58173916-58173935 | None:intergenic | 40.0% | |
| AGTTCAAACACACTGCTACA+TGG | + | chr1.1:58174182-58174201 | MS.gene062182:CDS | 40.0% | |
| ATGGGCACACTTTATTGTTG+AGG | + | chr1.1:58175762-58175781 | MS.gene062182:CDS | 40.0% | |
| ATGTAACCTGACTGACAAGA+AGG | + | chr1.1:58173276-58173295 | MS.gene062182:intron | 40.0% | |
| ATTAGAAGAATCGATTGCGG+CGG | - | chr1.1:58176045-58176064 | None:intergenic | 40.0% | |
| ATTGACATGATAGACGAGTC+GGG | + | chr1.1:58173684-58173703 | MS.gene062182:CDS | 40.0% | |
| CATTTACCTTTCCACCATGA+GGG | - | chr1.1:58175048-58175067 | None:intergenic | 40.0% | |
| CTGCAGAACAATGATTCAGT+TGG | + | chr1.1:58174313-58174332 | MS.gene062182:CDS | 40.0% | |
| CTGCAGATACTAGTATTCTC+TGG | - | chr1.1:58174299-58174318 | None:intergenic | 40.0% | |
| GAGATAGTCGACATAATTCG+AGG | + | chr1.1:58175688-58175707 | MS.gene062182:CDS | 40.0% | |
| GATATAGGGCCTATTTGGAT+TGG | - | chr1.1:58173232-58173251 | None:intergenic | 40.0% | |
| GTCGACATAATTCGAGGTTT+CGG | + | chr1.1:58175694-58175713 | MS.gene062182:CDS | 40.0% | |
| TCATTTACCTTTCCACCATG+AGG | - | chr1.1:58175049-58175068 | None:intergenic | 40.0% | |
| TCCGGTACACCCTAAAAAAT+TGG | + | chr1.1:58174910-58174929 | MS.gene062182:CDS | 40.0% | |
| TCGACATAATTCGAGGTTTC+GGG | + | chr1.1:58175695-58175714 | MS.gene062182:CDS | 40.0% | |
| TCTTGTCAGTCAGGTTACAT+AGG | - | chr1.1:58173276-58173295 | None:intergenic | 40.0% | |
| TGTAACCTGACTGACAAGAA+GGG | + | chr1.1:58173277-58173296 | MS.gene062182:intron | 40.0% | |
| ! | AAAGCATGTATCTGATGGTG+CGG | - | chr1.1:58175236-58175255 | None:intergenic | 40.0% |
| ! | AATCCTACTTGCACTGATCT+TGG | + | chr1.1:58174365-58174384 | MS.gene062182:CDS | 40.0% |
| ! | ACTTTCACTGCTGCAGATTT+TGG | + | chr1.1:58173608-58173627 | MS.gene062182:intron | 40.0% |
| ! | AGTGCTGCTACTGATAATAC+CGG | + | chr1.1:58174515-58174534 | MS.gene062182:CDS | 40.0% |
| ! | CAGATGTTTCTATCTCAGCT+AGG | - | chr1.1:58174391-58174410 | None:intergenic | 40.0% |
| ! | CTTTTCCGAGTATTATCGGT+CGG | - | chr1.1:58174578-58174597 | None:intergenic | 40.0% |
| ! | GGAATTGAAGAGCTTTTGAG+AGG | + | chr1.1:58174614-58174633 | MS.gene062182:CDS | 40.0% |
| ! | GTCTAGTTTCAGTTCCATCA+AGG | - | chr1.1:58174760-58174779 | None:intergenic | 40.0% |
| ! | TTTGATCTAGGATGCGATCA+AGG | + | chr1.1:58174455-58174474 | MS.gene062182:CDS | 40.0% |
| !! | ACAAAAACCATGGTGCTACA+TGG | + | chr1.1:58175471-58175490 | MS.gene062182:CDS | 40.0% |
| !! | CAAAAACCATGGTGCTACAT+GGG | + | chr1.1:58175472-58175491 | MS.gene062182:CDS | 40.0% |
| !! | GATGCATTCTGTTTCTGACT+TGG | + | chr1.1:58174787-58174806 | MS.gene062182:CDS | 40.0% |
| !! | GGGAAACGAAGTTTTATCGA+TGG | + | chr1.1:58173704-58173723 | MS.gene062182:CDS | 40.0% |
| !! | TTGATGAAAGCGCCAGAAAA+TGG | - | chr1.1:58171865-58171884 | None:intergenic | 40.0% |
| !! | TTTGTGCTTATGGTGATGGT+TGG | + | chr1.1:58171832-58171851 | MS.gene062182:CDS | 40.0% |
| !! | TTTTCTGGCGCTTTCATCAA+AGG | + | chr1.1:58171865-58171884 | MS.gene062182:CDS | 40.0% |
| !!! | CAGGCTCGTCCAATTTTTTA+GGG | - | chr1.1:58174922-58174941 | None:intergenic | 40.0% |
| !!! | GTTGGTCTTATGCCATTTTC+TGG | + | chr1.1:58171850-58171869 | MS.gene062182:CDS | 40.0% |
| !!! | TTTTTTAGGGTGTACCGGAA+CGG | - | chr1.1:58174909-58174928 | None:intergenic | 40.0% |
| AAAAATTGGACGAGCCTGCA+AGG | + | chr1.1:58174924-58174943 | MS.gene062182:CDS | 45.0% | |
| AACAAGAAGAAGGCTATGCC+GGG | + | chr1.1:58174950-58174969 | MS.gene062182:CDS | 45.0% | |
| ACCTCTATAAGCATTTGGCC+AGG | - | chr1.1:58175557-58175576 | None:intergenic | 45.0% | |
| ACCTGGCCAAATGCTTATAG+AGG | + | chr1.1:58175553-58175572 | MS.gene062182:CDS | 45.0% | |
| AGAAGAAGAGACTCCGCTAA+TGG | - | chr1.1:58172183-58172202 | None:intergenic | 45.0% | |
| AGGCGAATAGACATGTGACA+AGG | + | chr1.1:58175973-58175992 | MS.gene062182:CDS | 45.0% | |
| AGTATTATCGGTCGGTGTAC+CGG | - | chr1.1:58174570-58174589 | None:intergenic | 45.0% | |
| AGTTCCACAAGTGCATTTGC+TGG | + | chr1.1:58172056-58172075 | MS.gene062182:CDS | 45.0% | |
| CAACAAGAAGAAGGCTATGC+CGG | + | chr1.1:58174949-58174968 | MS.gene062182:CDS | 45.0% | |
| CCATGGATGATCTTTGCCAA+TGG | + | chr1.1:58174261-58174280 | MS.gene062182:CDS | 45.0% | |
| CCATTGGCAAAGATCATCCA+TGG | - | chr1.1:58174264-58174283 | None:intergenic | 45.0% | |
| CGACCGATAATACTCGGAAA+AGG | + | chr1.1:58174576-58174595 | MS.gene062182:CDS | 45.0% | |
| CTAAGCCACGACCAAAAGAT+CGG | + | chr1.1:58174981-58175000 | MS.gene062182:CDS | 45.0% | |
| CTTTCACAGGCAAGCATAGT+TGG | + | chr1.1:58172463-58172482 | MS.gene062182:CDS | 45.0% | |
| GGCATAGCCTTCTTCTTGTT+GGG | - | chr1.1:58174950-58174969 | None:intergenic | 45.0% | |
| GGGGAATTTACTTACACCAG+TGG | + | chr1.1:58174490-58174509 | MS.gene062182:CDS | 45.0% | |
| GTACACCGACCGATAATACT+CGG | + | chr1.1:58174570-58174589 | MS.gene062182:CDS | 45.0% | |
| GTTCCACAAGTGCATTTGCT+GGG | + | chr1.1:58172057-58172076 | MS.gene062182:CDS | 45.0% | |
| GTTGAGGACATGAAATCACC+TGG | + | chr1.1:58175536-58175555 | MS.gene062182:CDS | 45.0% | |
| TTCAACCCTTCTTGTCAGTC+AGG | - | chr1.1:58173285-58173304 | None:intergenic | 45.0% | |
| TTTCCATCGGAGAATCTGAC+TGG | + | chr1.1:58172154-58172173 | MS.gene062182:intron | 45.0% | |
| ! | AAGTGCATTTGCTGGGTGAA+GGG | + | chr1.1:58172064-58172083 | MS.gene062182:CDS | 45.0% |
| ! | ATCTGACTGGTCACCATTAG+CGG | + | chr1.1:58172167-58172186 | MS.gene062182:intron | 45.0% |
| ! | CGCCGTACTAACCTTATTTC+TGG | - | chr1.1:58172881-58172900 | None:intergenic | 45.0% |
| ! | TCCACATGCATTGACAGGTA+TGG | - | chr1.1:58172842-58172861 | None:intergenic | 45.0% |
| ! | TGAATCTGCTGCCGATCTTT+TGG | - | chr1.1:58174995-58175014 | None:intergenic | 45.0% |
| !! | AAGAGCACTTGTGAGCTGTT+TGG | - | chr1.1:58173186-58173205 | None:intergenic | 45.0% |
| !!! | GCAGGCTCGTCCAATTTTTT+AGG | - | chr1.1:58174923-58174942 | None:intergenic | 45.0% |
| ACAAGAAGAAGGCTATGCCG+GGG | + | chr1.1:58174951-58174970 | MS.gene062182:CDS | 50.0% | |
| ACCTGTCAATGCATGTGGAG+TGG | + | chr1.1:58172843-58172862 | MS.gene062182:CDS | 50.0% | |
| AGGCCAAGATCAGTGCAAGT+AGG | - | chr1.1:58174371-58174390 | None:intergenic | 50.0% | |
| ATCAAGGCAGTGAATGGTGG+GGG | + | chr1.1:58174471-58174490 | MS.gene062182:CDS | 50.0% | |
| CAAATGCCCATGTAGCACCA+TGG | - | chr1.1:58175481-58175500 | None:intergenic | 50.0% | |
| CAATCTTAAGAGGGCCGTTC+CGG | + | chr1.1:58174892-58174911 | MS.gene062182:CDS | 50.0% | |
| CGATCAAGGCAGTGAATGGT+GGG | + | chr1.1:58174469-58174488 | MS.gene062182:CDS | 50.0% | |
| CGATGCTACACTGTGAAACC+AGG | - | chr1.1:58175200-58175219 | None:intergenic | 50.0% | |
| CGGCATAGCCTTCTTCTTGT+TGG | - | chr1.1:58174951-58174970 | None:intergenic | 50.0% | |
| CTGGTGAAGGAGCAAACCAT+TGG | - | chr1.1:58174280-58174299 | None:intergenic | 50.0% | |
| GATCAAGGCAGTGAATGGTG+GGG | + | chr1.1:58174470-58174489 | MS.gene062182:CDS | 50.0% | |
| GATGCGATCAAGGCAGTGAA+TGG | + | chr1.1:58174465-58174484 | MS.gene062182:CDS | 50.0% | |
| GCATGTGGAGTGGTACAGTT+TGG | + | chr1.1:58172853-58172872 | MS.gene062182:CDS | 50.0% | |
| GCCATACCTGTCAATGCATG+TGG | + | chr1.1:58172838-58172857 | MS.gene062182:CDS | 50.0% | |
| TCACCCAGCAAATGCACTTG+TGG | - | chr1.1:58172063-58172082 | None:intergenic | 50.0% | |
| TGACCAGTCAGATTCTCCGA+TGG | - | chr1.1:58172160-58172179 | None:intergenic | 50.0% | |
| TGCAAGGCCCAACAAGAAGA+AGG | + | chr1.1:58174940-58174959 | MS.gene062182:CDS | 50.0% | |
| TTCTTCTTGTTGGGCCTTGC+AGG | - | chr1.1:58174941-58174960 | None:intergenic | 50.0% | |
| ! | ACCACTCCACATGCATTGAC+AGG | - | chr1.1:58172847-58172866 | None:intergenic | 50.0% |
| ! | CAAGTGCATTTGCTGGGTGA+AGG | + | chr1.1:58172063-58172082 | MS.gene062182:CDS | 50.0% |
| ! | CATCATCCCTCATGGTGGAA+AGG | + | chr1.1:58175039-58175058 | MS.gene062182:CDS | 50.0% |
| ! | GTTGGTGAAGCTGCTTTCAC+AGG | + | chr1.1:58172450-58172469 | MS.gene062182:CDS | 50.0% |
| !! | TTGAGAGGCATCATCCCTCA+TGG | + | chr1.1:58175031-58175050 | MS.gene062182:CDS | 50.0% |
| CAAGAAGAAGGCTATGCCGG+GGG | + | chr1.1:58174952-58174971 | MS.gene062182:CDS | 55.0% | |
| GAATCGATTGCGGCGGTGTT+TGG | - | chr1.1:58176038-58176057 | None:intergenic | 55.0% | |
| GCGATCAAGGCAGTGAATGG+TGG | + | chr1.1:58174468-58174487 | MS.gene062182:CDS | 55.0% | |
| TCAGTAGCAGCACTCACCAC+TGG | - | chr1.1:58174509-58174528 | None:intergenic | 55.0% | |
| ! | TGCTGCCGATCTTTTGGTCG+TGG | - | chr1.1:58174989-58175008 | None:intergenic | 55.0% |
| !! | AGAGGCATCATCCCTCATGG+TGG | + | chr1.1:58175034-58175053 | MS.gene062182:CDS | 55.0% |
| CGTGGCTTAGTGCTCTCCCC+CGG | - | chr1.1:58174971-58174990 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 58171786 | 58176088 | 58171786 | ID=MS.gene062182 |
| chr1.1 | mRNA | 58171786 | 58176088 | 58171786 | ID=MS.gene062182.t1;Parent=MS.gene062182 |
| chr1.1 | exon | 58171786 | 58171895 | 58171786 | ID=MS.gene062182.t1.exon1;Parent=MS.gene062182.t1 |
| chr1.1 | CDS | 58171786 | 58171895 | 58171786 | ID=cds.MS.gene062182.t1;Parent=MS.gene062182.t1 |
| chr1.1 | exon | 58171996 | 58172085 | 58171996 | ID=MS.gene062182.t1.exon2;Parent=MS.gene062182.t1 |
| chr1.1 | CDS | 58171996 | 58172085 | 58171996 | ID=cds.MS.gene062182.t1;Parent=MS.gene062182.t1 |
| chr1.1 | exon | 58172446 | 58172506 | 58172446 | ID=MS.gene062182.t1.exon3;Parent=MS.gene062182.t1 |
| chr1.1 | CDS | 58172446 | 58172506 | 58172446 | ID=cds.MS.gene062182.t1;Parent=MS.gene062182.t1 |
| chr1.1 | exon | 58172590 | 58172634 | 58172590 | ID=MS.gene062182.t1.exon4;Parent=MS.gene062182.t1 |
| chr1.1 | CDS | 58172590 | 58172634 | 58172590 | ID=cds.MS.gene062182.t1;Parent=MS.gene062182.t1 |
| chr1.1 | exon | 58172829 | 58172888 | 58172829 | ID=MS.gene062182.t1.exon5;Parent=MS.gene062182.t1 |
| chr1.1 | CDS | 58172829 | 58172888 | 58172829 | ID=cds.MS.gene062182.t1;Parent=MS.gene062182.t1 |
| chr1.1 | exon | 58173624 | 58175060 | 58173624 | ID=MS.gene062182.t1.exon6;Parent=MS.gene062182.t1 |
| chr1.1 | CDS | 58173624 | 58175060 | 58173624 | ID=cds.MS.gene062182.t1;Parent=MS.gene062182.t1 |
| chr1.1 | exon | 58175210 | 58175311 | 58175210 | ID=MS.gene062182.t1.exon7;Parent=MS.gene062182.t1 |
| chr1.1 | CDS | 58175210 | 58175311 | 58175210 | ID=cds.MS.gene062182.t1;Parent=MS.gene062182.t1 |
| chr1.1 | exon | 58175419 | 58175574 | 58175419 | ID=MS.gene062182.t1.exon8;Parent=MS.gene062182.t1 |
| chr1.1 | CDS | 58175419 | 58175574 | 58175419 | ID=cds.MS.gene062182.t1;Parent=MS.gene062182.t1 |
| chr1.1 | exon | 58175658 | 58175783 | 58175658 | ID=MS.gene062182.t1.exon9;Parent=MS.gene062182.t1 |
| chr1.1 | CDS | 58175658 | 58175783 | 58175658 | ID=cds.MS.gene062182.t1;Parent=MS.gene062182.t1 |
| chr1.1 | exon | 58175972 | 58176088 | 58175972 | ID=MS.gene062182.t1.exon10;Parent=MS.gene062182.t1 |
| chr1.1 | CDS | 58175972 | 58176088 | 58175972 | ID=cds.MS.gene062182.t1;Parent=MS.gene062182.t1 |
| Gene Sequence |
| Protein sequence |
