Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062833.t1 | XP_013464372.1 | 99.7 | 298 | 1 | 0 | 1 | 298 | 1 | 298 | 2.70E-159 | 571.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062833.t1 | Q9LRR6 | 69.7 | 287 | 81 | 1 | 17 | 297 | 39 | 325 | 3.4e-110 | 399.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062833.t1 | A0A072V9E0 | 99.7 | 298 | 1 | 0 | 1 | 298 | 1 | 298 | 2.0e-159 | 571.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051248 | MS.gene062833 | 0.816394 | 5.66E-52 | -1.69E-46 |
| MS.gene059154 | MS.gene062833 | 0.812076 | 5.08E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062833.t1 | MTR_2g070540 | 99.664 | 298 | 1 | 0 | 1 | 298 | 1 | 298 | 0.0 | 615 |
| MS.gene062833.t1 | MTR_3g092510 | 65.169 | 267 | 89 | 3 | 28 | 291 | 105 | 370 | 3.24e-124 | 360 |
| MS.gene062833.t1 | MTR_3g092550 | 64.388 | 278 | 87 | 3 | 28 | 294 | 104 | 380 | 1.25e-121 | 353 |
| MS.gene062833.t1 | MTR_3g102040 | 29.310 | 174 | 105 | 6 | 114 | 282 | 25 | 185 | 5.85e-13 | 69.3 |
| MS.gene062833.t1 | MTR_4g085540 | 28.652 | 178 | 109 | 6 | 111 | 283 | 32 | 196 | 2.02e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062833.t1 | AT3G14450 | 71.080 | 287 | 77 | 1 | 17 | 297 | 39 | 325 | 6.88e-152 | 428 |
| MS.gene062833.t1 | AT1G53650 | 69.643 | 280 | 69 | 5 | 17 | 294 | 38 | 303 | 7.49e-142 | 402 |
| MS.gene062833.t1 | AT1G53650 | 68.440 | 282 | 75 | 4 | 17 | 294 | 38 | 309 | 1.97e-133 | 381 |
| MS.gene062833.t1 | AT1G32790 | 63.971 | 272 | 93 | 1 | 28 | 294 | 83 | 354 | 4.04e-123 | 356 |
| MS.gene062833.t1 | AT3G49390 | 64.179 | 268 | 90 | 4 | 28 | 294 | 87 | 349 | 3.69e-120 | 348 |
| MS.gene062833.t1 | AT3G49390 | 64.179 | 268 | 90 | 4 | 28 | 294 | 87 | 349 | 3.69e-120 | 348 |
| MS.gene062833.t1 | AT3G49390 | 64.179 | 268 | 90 | 4 | 28 | 294 | 87 | 349 | 3.69e-120 | 348 |
| MS.gene062833.t1 | AT4G10610 | 63.941 | 269 | 86 | 2 | 28 | 291 | 66 | 328 | 2.60e-119 | 346 |
| MS.gene062833.t1 | AT1G32790 | 62.692 | 260 | 92 | 1 | 28 | 282 | 83 | 342 | 2.00e-114 | 336 |
| MS.gene062833.t1 | AT1G32790 | 41.975 | 81 | 46 | 1 | 210 | 290 | 173 | 252 | 2.39e-14 | 73.2 |
| MS.gene062833.t1 | AT4G10610 | 62.791 | 258 | 85 | 2 | 28 | 280 | 66 | 317 | 2.79e-112 | 328 |
| MS.gene062833.t1 | AT4G10610 | 38.824 | 85 | 51 | 1 | 206 | 290 | 146 | 229 | 6.28e-12 | 65.5 |
| MS.gene062833.t1 | AT5G24440 | 52.837 | 282 | 120 | 2 | 17 | 289 | 36 | 313 | 2.40e-99 | 295 |
| MS.gene062833.t1 | AT5G24440 | 41.860 | 86 | 49 | 1 | 205 | 290 | 132 | 216 | 8.45e-14 | 71.2 |
Find 66 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCATACCCTTCGATTGTT+TGG | 0.222316 | 2.4:+24884905 | None:intergenic |
| CTGAATTCAGATTCAGCTTT+TGG | 0.224207 | 2.4:+24885091 | None:intergenic |
| GGTTACGCGCTTGAGGCTTT+TGG | 0.235319 | 2.4:-24880928 | MS.gene062833:CDS |
| TTGTCCACAATTGGTGAATA+AGG | 0.247931 | 2.4:+24883747 | None:intergenic |
| AAACTGTAGCGGCATGCTTT+TGG | 0.294414 | 2.4:-24880098 | MS.gene062833:CDS |
| CGTTCAACCTTCTCCTCCCT+TGG | 0.306807 | 2.4:+24883976 | None:intergenic |
| GCTTAGTGTTGACCAGAAAA+TGG | 0.311863 | 2.4:+24884948 | None:intergenic |
| TTGTACAAATATTGACAAAA+AGG | 0.314486 | 2.4:-24881373 | MS.gene062833:intron |
| TTCAGCTGATGCCAACAAAA+TGG | 0.330118 | 2.4:-24885122 | MS.gene062833:CDS |
| ATCATACCCTTCGATTGTTT+GGG | 0.345576 | 2.4:+24884906 | None:intergenic |
| ATAACTTACTTGTCCACAAT+TGG | 0.377012 | 2.4:+24883738 | None:intergenic |
| GGCCTCACTGGAGTCTTTGA+AGG | 0.384362 | 2.4:+24879951 | None:intergenic |
| CGAGCAACCCTTGGCCTCAC+TGG | 0.390725 | 2.4:+24879939 | None:intergenic |
| AACCTTGGTGGTACTGTGCT+TGG | 0.416008 | 2.4:-24881650 | MS.gene062833:CDS |
| AATGCGGATCACCACAAATT+CGG | 0.432023 | 2.4:+24881864 | None:intergenic |
| GTTCAACCTTCTCCTCCCTT+GGG | 0.452495 | 2.4:+24883977 | None:intergenic |
| TGACGGCCATGATCATGATT+AGG | 0.454312 | 2.4:+24884995 | None:intergenic |
| GTTCACAAAGCTGAATCCTT+TGG | 0.463673 | 2.4:-24885047 | MS.gene062833:CDS |
| ATAATGGTACCAAACCTGAT+AGG | 0.472253 | 2.4:+24880067 | None:intergenic |
| GTCATTGATTGCCGAATTTG+TGG | 0.473392 | 2.4:-24881875 | MS.gene062833:CDS |
| CCGATCGGTTAACGCGATAC+AGG | 0.479639 | 2.4:+24879915 | None:intergenic |
| TGAATCCTACATTCCTCCCC+AGG | 0.485315 | 2.4:-24881580 | MS.gene062833:CDS |
| TTCGAAGGAAGGACCCTCAC+TGG | 0.492340 | 2.4:+24881620 | None:intergenic |
| CAAAGACTCCAGTGAGGCCA+AGG | 0.492377 | 2.4:-24879947 | MS.gene062833:CDS |
| CATGCAGTCGGATGATGAGC+GGG | 0.512341 | 2.4:-24881418 | MS.gene062833:intron |
| GTGTTGACCAGAAAATGGTT+AGG | 0.517283 | 2.4:+24884953 | None:intergenic |
| CATACCCTGGGGAGGAATGT+AGG | 0.517978 | 2.4:+24881575 | None:intergenic |
| GGGAGGAATGTAGGATTCAC+AGG | 0.522132 | 2.4:+24881584 | None:intergenic |
| TATTCTCCTAATCATGATCA+TGG | 0.524419 | 2.4:-24885001 | MS.gene062833:CDS |
| GCAAGGGCAGCTTTAAACCT+TGG | 0.527689 | 2.4:-24881665 | MS.gene062833:CDS |
| GCAGCCTTATTCACCAATTG+TGG | 0.527712 | 2.4:-24883751 | MS.gene062833:CDS |
| TGATGAGATTAAACCCTTGA+CGG | 0.534141 | 2.4:+24884978 | None:intergenic |
| ATCATGATCATGGCCGTCAA+GGG | 0.543640 | 2.4:-24884991 | MS.gene062833:CDS |
| TTTCTTGGTTTAGGTTACTG+AGG | 0.557417 | 2.4:-24883782 | MS.gene062833:intron |
| TTTCACAGGTTACGCGCTTG+AGG | 0.557575 | 2.4:-24880935 | MS.gene062833:intron |
| GATACAGGACGAGCAACCCT+TGG | 0.563628 | 2.4:+24879930 | None:intergenic |
| AAAGCTGAATCCTTTGGCTA+AGG | 0.568332 | 2.4:-24885041 | MS.gene062833:CDS |
| TCATGTCAACAGATGGTGCA+AGG | 0.569752 | 2.4:-24881682 | MS.gene062833:intron |
| ATAATAACCCAAACAATCGA+AGG | 0.576301 | 2.4:-24884913 | MS.gene062833:CDS |
| TGATTAGGAGAATAAGATGA+AGG | 0.576404 | 2.4:+24885010 | None:intergenic |
| GTTGAACGGAAGATCGCTAA+AGG | 0.577137 | 2.4:-24883961 | MS.gene062833:CDS |
| GGGTTATTATCATTAGCAGA+AGG | 0.581158 | 2.4:+24884926 | None:intergenic |
| CAATTCGAGTTGAATGCACC+TGG | 0.583914 | 2.4:+24880901 | None:intergenic |
| AACTTCTTTGAATCATCATG+TGG | 0.584423 | 2.4:-24881050 | MS.gene062833:CDS |
| AATCATGATCATGGCCGTCA+AGG | 0.590810 | 2.4:-24884992 | MS.gene062833:CDS |
| AGCAGTAACAACAGTTGCCA+TGG | 0.591951 | 2.4:+24885150 | None:intergenic |
| TGGTTTAGGTTACTGAGGAG+CGG | 0.592921 | 2.4:-24883777 | MS.gene062833:intron |
| ATGAGCGGGAAATGTGTACC+AGG | 0.597275 | 2.4:-24881404 | MS.gene062833:CDS |
| GGAATGTAGGATTCACAGGA+AGG | 0.618003 | 2.4:+24881588 | None:intergenic |
| ATTTGTACAATAGACAGTCC+TGG | 0.620124 | 2.4:+24881386 | None:intergenic |
| AGGGCAGCTTTAAACCTTGG+TGG | 0.621096 | 2.4:-24881662 | MS.gene062833:CDS |
| CTTTGAATCATCATGTGGCG+AGG | 0.622886 | 2.4:-24881045 | MS.gene062833:intron |
| CATGTCAACAGATGGTGCAA+GGG | 0.627275 | 2.4:-24881681 | MS.gene062833:intron |
| GCTTGGATACTATCCAGTGA+GGG | 0.628896 | 2.4:-24881633 | MS.gene062833:CDS |
| AAAGACTCCAGTGAGGCCAA+GGG | 0.631851 | 2.4:-24879946 | MS.gene062833:CDS |
| ACATGCAGTCGGATGATGAG+CGG | 0.641380 | 2.4:-24881419 | MS.gene062833:intron |
| AAAATATTCATACCCTGGGG+AGG | 0.643159 | 2.4:+24881567 | None:intergenic |
| TAATAACCCAAACAATCGAA+GGG | 0.646031 | 2.4:-24884912 | MS.gene062833:intron |
| GCTACAGTTTAGTGCAACAA+TGG | 0.660726 | 2.4:+24880111 | None:intergenic |
| GCAAAGCGAAGAACTGAATG+CGG | 0.663672 | 2.4:+24881848 | None:intergenic |
| CAAGGGAGGAGAAGGTTGAA+CGG | 0.663891 | 2.4:-24883975 | MS.gene062833:CDS |
| GAATCCTACATTCCTCCCCA+GGG | 0.668990 | 2.4:-24881579 | MS.gene062833:intron |
| ATTGTTGCACTAAACTGTAG+CGG | 0.677875 | 2.4:-24880109 | MS.gene062833:CDS |
| TGCTTGGATACTATCCAGTG+AGG | 0.696812 | 2.4:-24881634 | MS.gene062833:CDS |
| ATCCAAGCACAGTACCACCA+AGG | 0.728153 | 2.4:+24881648 | None:intergenic |
| GTCCTTCAAAGACTCCAGTG+AGG | 0.760009 | 2.4:-24879953 | MS.gene062833:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAGTTTAAAAAAATGT+TGG | + | chr2.4:24880797-24880816 | None:intergenic | 10.0% |
| !! | TTATAATTATTTAAATATGG+CGG | + | chr2.4:24883149-24883168 | None:intergenic | 10.0% |
| !!! | ACATAAAATCAAAAATATTT+TGG | - | chr2.4:24883562-24883581 | MS.gene062833:intron | 10.0% |
| !!! | CTTTAAAATATTTACAAAAT+AGG | + | chr2.4:24884822-24884841 | None:intergenic | 10.0% |
| !!! | GTTCTTTTAAATTATTTTTT+TGG | - | chr2.4:24881901-24881920 | MS.gene062833:intron | 10.0% |
| !!! | TGCTTAATAATTTTTTAATA+TGG | - | chr2.4:24881400-24881419 | MS.gene062833:CDS | 10.0% |
| !!! | TTTTGATTTTTTTTTTGTTT+TGG | - | chr2.4:24880336-24880355 | MS.gene062833:intron | 10.0% |
| !! | AAAAAATAACAATCAAAATG+AGG | + | chr2.4:24880207-24880226 | None:intergenic | 15.0% |
| !! | AAAAATAACAATCAAAATGA+GGG | + | chr2.4:24880206-24880225 | None:intergenic | 15.0% |
| !! | AAAAATTATTAAGCATGTAA+CGG | + | chr2.4:24881395-24881414 | None:intergenic | 15.0% |
| !! | CAATAAATGCATAAAATATT+AGG | + | chr2.4:24883051-24883070 | None:intergenic | 15.0% |
| !! | TAAAAGTTATTTATCTCAAA+AGG | - | chr2.4:24884086-24884105 | MS.gene062833:intron | 15.0% |
| !! | TTAGTCAATACTTTATTAAT+TGG | - | chr2.4:24884233-24884252 | MS.gene062833:intron | 15.0% |
| !!! | ATGAAATGATTGTTTTATTA+TGG | + | chr2.4:24884057-24884076 | None:intergenic | 15.0% |
| !!! | CTAATATTTTATGCATTTAT+TGG | - | chr2.4:24883049-24883068 | MS.gene062833:intron | 15.0% |
| !!! | TAACATTTTATTACATCATT+TGG | - | chr2.4:24883166-24883185 | MS.gene062833:intron | 15.0% |
| !!! | TATATTGTAACAGATATTTT+TGG | - | chr2.4:24883759-24883778 | MS.gene062833:CDS | 15.0% |
| !! | AAATACAACCAATTATAGAA+AGG | + | chr2.4:24883535-24883554 | None:intergenic | 20.0% |
| !! | AACAAAGTTGAAGTTATTTA+TGG | + | chr2.4:24884296-24884315 | None:intergenic | 20.0% |
| !! | AAGATGGTGTTTAAATAATT+CGG | + | chr2.4:24881270-24881289 | None:intergenic | 20.0% |
| !! | AGACAATATATAGAAGATAA+AGG | + | chr2.4:24882973-24882992 | None:intergenic | 20.0% |
| !! | CATGATCAAAATAATGAAAT+AGG | + | chr2.4:24883365-24883384 | None:intergenic | 20.0% |
| !! | CTGTCATTATTATATTAACT+TGG | - | chr2.4:24884874-24884893 | MS.gene062833:intron | 20.0% |
| !! | GGTTTAAAAGATTCAAAAAT+TGG | - | chr2.4:24883825-24883844 | MS.gene062833:intron | 20.0% |
| !! | TAAATAAGTGCAAATTTAAG+TGG | - | chr2.4:24884773-24884792 | MS.gene062833:intron | 20.0% |
| !! | TAAATTACAAACAAATCACA+CGG | + | chr2.4:24880630-24880649 | None:intergenic | 20.0% |
| !! | TCAATTTAGTGAAATAAAGT+AGG | - | chr2.4:24880462-24880481 | MS.gene062833:intron | 20.0% |
| !! | TTAAGAGAATCAATATACAA+AGG | + | chr2.4:24883603-24883622 | None:intergenic | 20.0% |
| !! | TTGTACAAATATTGACAAAA+AGG | - | chr2.4:24883698-24883717 | MS.gene062833:intron | 20.0% |
| !! | TTTCTATAATTGGTTGTATT+TGG | - | chr2.4:24883534-24883553 | MS.gene062833:intron | 20.0% |
| !!! | AACTATGATCTCTTTAATTT+TGG | - | chr2.4:24882896-24882915 | MS.gene062833:intron | 20.0% |
| !!! | ACATAACAAAGTATCATAAT+AGG | + | chr2.4:24881508-24881527 | None:intergenic | 20.0% |
| !!! | ATTTTTCTGCTTTTTTTGTA+TGG | - | chr2.4:24880421-24880440 | MS.gene062833:intron | 20.0% |
| !!! | CTATTTCATTATTTTGATCA+TGG | - | chr2.4:24883363-24883382 | MS.gene062833:intron | 20.0% |
| !!! | GATCATATTTTATTATCCTT+CGG | - | chr2.4:24885081-24885100 | MS.gene062833:CDS | 20.0% |
| !!! | TATGGAAAAAAATTCACTTT+TGG | - | chr2.4:24880519-24880538 | MS.gene062833:intron | 20.0% |
| !!! | TATTATGATACTTTGTTATG+TGG | - | chr2.4:24881507-24881526 | MS.gene062833:intron | 20.0% |
| !!! | TTATCTCAAAAGGTAAATTT+TGG | - | chr2.4:24884096-24884115 | MS.gene062833:intron | 20.0% |
| !!! | TTTTCACATAACATATTAGT+AGG | + | chr2.4:24880935-24880954 | None:intergenic | 20.0% |
| ! | ATAATGCATCCATGAATTAT+CGG | - | chr2.4:24883905-24883924 | MS.gene062833:CDS | 25.0% |
| ! | ATACAAAACACTGCATTTAA+GGG | + | chr2.4:24882554-24882573 | None:intergenic | 25.0% |
| ! | ATTTATGTTTACTACATTCG+TGG | - | chr2.4:24880645-24880664 | MS.gene062833:intron | 25.0% |
| ! | ATTTCCAATCAACAAGATAT+AGG | + | chr2.4:24880403-24880422 | None:intergenic | 25.0% |
| ! | CTAATATGTTATGTGAAAAC+TGG | - | chr2.4:24880936-24880955 | MS.gene062833:intron | 25.0% |
| ! | TAAATAAGAGAAAAGACAAC+AGG | + | chr2.4:24880865-24880884 | None:intergenic | 25.0% |
| ! | TAATTAGTGTTGTCAAATTG+TGG | - | chr2.4:24884450-24884469 | MS.gene062833:intron | 25.0% |
| ! | TAATTATTTAAATATGGCGG+TGG | + | chr2.4:24883146-24883165 | None:intergenic | 25.0% |
| ! | TATAATTGGTTGTATTTGGA+TGG | - | chr2.4:24883538-24883557 | MS.gene062833:intron | 25.0% |
| ! | TATTACATCATTTGGATTGA+AGG | - | chr2.4:24883174-24883193 | MS.gene062833:intron | 25.0% |
| ! | TTGGTTCAGAAGAAATTAAT+GGG | + | chr2.4:24881700-24881719 | None:intergenic | 25.0% |
| ! | TTTCCAATCAACAAGATATA+GGG | + | chr2.4:24880402-24880421 | None:intergenic | 25.0% |
| ! | TTTCTGTTCCTTTCTATAAT+TGG | - | chr2.4:24883524-24883543 | MS.gene062833:intron | 25.0% |
| ! | TTTGCACTTATTTAAATGAC+TGG | + | chr2.4:24884767-24884786 | None:intergenic | 25.0% |
| !! | AATCTTTTAAACCATTTGAG+CGG | + | chr2.4:24883818-24883837 | None:intergenic | 25.0% |
| !! | AGGGCATAATTTTCAAATTA+AGG | + | chr2.4:24882111-24882130 | None:intergenic | 25.0% |
| !! | ATTTAAACACCATCTTTTCT+TGG | - | chr2.4:24881274-24881293 | MS.gene062833:intron | 25.0% |
| !! | CATTTTATGACACCTTAAAA+TGG | - | chr2.4:24882300-24882319 | MS.gene062833:intron | 25.0% |
| !! | CGGTTTTCTATTATCAAAAT+CGG | + | chr2.4:24881250-24881269 | None:intergenic | 25.0% |
| !! | TAACAGATCTGCATTTTATT+CGG | + | chr2.4:24882051-24882070 | None:intergenic | 25.0% |
| !! | TTTGGTTCAGAAGAAATTAA+TGG | + | chr2.4:24881701-24881720 | None:intergenic | 25.0% |
| !! | TTTGTGATGATTTTTGTGAT+GGG | - | chr2.4:24880252-24880271 | MS.gene062833:intron | 25.0% |
| !! | TTTTGTGATGATTTTTGTGA+TGG | - | chr2.4:24880251-24880270 | MS.gene062833:intron | 25.0% |
| !!! | AGCTTTTTATTGTTGTTACA+GGG | - | chr2.4:24882416-24882435 | MS.gene062833:intron | 25.0% |
| !!! | GAATGAAAAGTTGATAGTAA+CGG | + | chr2.4:24881570-24881589 | None:intergenic | 25.0% |
| !!! | GGTAAAACTACTTTTAGTTT+AGG | - | chr2.4:24883780-24883799 | MS.gene062833:intron | 25.0% |
| !!! | TATACAGACTCTTTGTTTTA+AGG | + | chr2.4:24880563-24880582 | None:intergenic | 25.0% |
| AAACCCTATATCTTGTTGAT+TGG | - | chr2.4:24880396-24880415 | MS.gene062833:intron | 30.0% | |
| AACAGAAAATATTCATACCC+TGG | + | chr2.4:24883512-24883531 | None:intergenic | 30.0% | |
| AACTTCTTTGAATCATCATG+TGG | - | chr2.4:24884021-24884040 | MS.gene062833:intron | 30.0% | |
| ACACGTAACAACAAATCAAA+AGG | + | chr2.4:24882787-24882806 | None:intergenic | 30.0% | |
| ACAGAAAATATTCATACCCT+GGG | + | chr2.4:24883511-24883530 | None:intergenic | 30.0% | |
| ACTGCATGTTACAAAAGAAA+CGG | + | chr2.4:24883641-24883660 | None:intergenic | 30.0% | |
| AGGAATTGTTATCTGTGATA+TGG | - | chr2.4:24880501-24880520 | MS.gene062833:intron | 30.0% | |
| AGTTGAAGTTATTTATGGTG+CGG | + | chr2.4:24884291-24884310 | None:intergenic | 30.0% | |
| ATAACTTACTTGTCCACAAT+TGG | + | chr2.4:24881336-24881355 | None:intergenic | 30.0% | |
| ATAATAACCCAAACAATCGA+AGG | - | chr2.4:24880158-24880177 | MS.gene062833:intron | 30.0% | |
| CAAAAACTATCCTCCAATAA+TGG | + | chr2.4:24885023-24885042 | None:intergenic | 30.0% | |
| CACAATCAAAACGAATCAAA+AGG | + | chr2.4:24882852-24882871 | None:intergenic | 30.0% | |
| CATACAAAACACTGCATTTA+AGG | + | chr2.4:24882555-24882574 | None:intergenic | 30.0% | |
| CATATATGTAAACGACAGAA+AGG | + | chr2.4:24881609-24881628 | None:intergenic | 30.0% | |
| CATCATGAATGTTCAACATA+TGG | + | chr2.4:24881481-24881500 | None:intergenic | 30.0% | |
| CGTAGTTGTTAATTAAGTAG+GGG | - | chr2.4:24884690-24884709 | MS.gene062833:intron | 30.0% | |
| CTCAAGAAGGAAGAAATAAA+CGG | + | chr2.4:24884927-24884946 | None:intergenic | 30.0% | |
| GCGTAGTTGTTAATTAAGTA+GGG | - | chr2.4:24884689-24884708 | MS.gene062833:intron | 30.0% | |
| GGCTTGTAGAAGAAATTAAT+GGG | + | chr2.4:24881724-24881743 | None:intergenic | 30.0% | |
| GTGAAATACACTGTTGTAAA+TGG | - | chr2.4:24881955-24881974 | MS.gene062833:intron | 30.0% | |
| TAACCTAAACCAAGAAAAGA+TGG | + | chr2.4:24881286-24881305 | None:intergenic | 30.0% | |
| TAATAACCCAAACAATCGAA+GGG | - | chr2.4:24880159-24880178 | MS.gene062833:intron | 30.0% | |
| TATTCTCCTAATCATGATCA+TGG | - | chr2.4:24880070-24880089 | MS.gene062833:intron | 30.0% | |
| TCAATTTGTGAAAGATTGCA+GGG | - | chr2.4:24882263-24882282 | MS.gene062833:intron | 30.0% | |
| TGATTAGGAGAATAAGATGA+AGG | + | chr2.4:24880064-24880083 | None:intergenic | 30.0% | |
| TTACGAACAATCCTTCTATA+CGG | + | chr2.4:24881745-24881764 | None:intergenic | 30.0% | |
| TTGTCGTTATTCGATTTCAT+TGG | - | chr2.4:24880771-24880790 | MS.gene062833:intron | 30.0% | |
| ! | AATACTAGTGTTGTTAGTCA+TGG | + | chr2.4:24884607-24884626 | None:intergenic | 30.0% |
| ! | AGCCAAAATTCTCCATTTTA+AGG | + | chr2.4:24882315-24882334 | None:intergenic | 30.0% |
| ! | ATCTGCATTTTATTCGGTTA+AGG | + | chr2.4:24882045-24882064 | None:intergenic | 30.0% |
| ! | ATGAGTCTTCATTGATTGAT+TGG | - | chr2.4:24881354-24881373 | MS.gene062833:intron | 30.0% |
| ! | CACCTTAAAATGGAGAATTT+TGG | - | chr2.4:24882310-24882329 | MS.gene062833:intron | 30.0% |
| ! | GAAGCAGTGTTGTTAAATAT+CGG | - | chr2.4:24882196-24882215 | MS.gene062833:intron | 30.0% |
| ! | TTTCTTTTGTAACATGCAGT+CGG | - | chr2.4:24883641-24883660 | MS.gene062833:intron | 30.0% |
| !! | CAAGCATAACAATTTTGGTA+TGG | + | chr2.4:24881784-24881803 | None:intergenic | 30.0% |
| !! | CAGCTTTTTATTGTTGTTAC+AGG | - | chr2.4:24882415-24882434 | MS.gene062833:intron | 30.0% |
| !! | GTAGAAGAAATTAATGGGTT+TGG | + | chr2.4:24881719-24881738 | None:intergenic | 30.0% |
| !! | GTCATTTTAACATGTTTACC+AGG | - | chr2.4:24883877-24883896 | MS.gene062833:intron | 30.0% |
| !! | TACAAAGTGTTGTCAAATAG+CGG | - | chr2.4:24884530-24884549 | MS.gene062833:intron | 30.0% |
| !! | TGATTTGTTGTTACGTGTTA+AGG | - | chr2.4:24882789-24882808 | MS.gene062833:intron | 30.0% |
| !! | TTTTTATTGTTGTTACAGGG+AGG | - | chr2.4:24882419-24882438 | MS.gene062833:intron | 30.0% |
| !!! | CTGCTTTTTTTGTATGGTAA+AGG | - | chr2.4:24880427-24880446 | MS.gene062833:intron | 30.0% |
| AAAACTCACAAAGCGATAGA+GGG | - | chr2.4:24882469-24882488 | MS.gene062833:intron | 35.0% | |
| AAACACTGCATTTAAGGGTT+TGG | + | chr2.4:24882549-24882568 | None:intergenic | 35.0% | |
| AACACTGCATTTAAGGGTTT+GGG | + | chr2.4:24882548-24882567 | None:intergenic | 35.0% | |
| AATAAAAAGCTGTCTACCTC+TGG | + | chr2.4:24882407-24882426 | None:intergenic | 35.0% | |
| AATCATACCCTTCGATTGTT+TGG | + | chr2.4:24880169-24880188 | None:intergenic | 35.0% | |
| ACTGAAATTGTCAACGATTG+CGG | + | chr2.4:24880708-24880727 | None:intergenic | 35.0% | |
| AGATAACAATTCCTGATGCA+TGG | + | chr2.4:24880495-24880514 | None:intergenic | 35.0% | |
| AGTTGAATTGTCGAAGAGAA+AGG | + | chr2.4:24882997-24883016 | None:intergenic | 35.0% | |
| ATAATGGTACCAAACCTGAT+AGG | + | chr2.4:24885007-24885026 | None:intergenic | 35.0% | |
| ATAATTGTTGACCGCTCAAA+TGG | - | chr2.4:24883804-24883823 | MS.gene062833:intron | 35.0% | |
| ATATGACACGTATCATGCTA+TGG | - | chr2.4:24880905-24880924 | MS.gene062833:CDS | 35.0% | |
| ATCATACCCTTCGATTGTTT+GGG | + | chr2.4:24880168-24880187 | None:intergenic | 35.0% | |
| ATGGAATTCATGTCAACAGA+TGG | - | chr2.4:24883382-24883401 | MS.gene062833:intron | 35.0% | |
| ATTATCCTTCGGATTCTGTA+GGG | - | chr2.4:24885092-24885111 | MS.gene062833:CDS | 35.0% | |
| ATTGTGCCTTAACACATAGT+AGG | + | chr2.4:24882733-24882752 | None:intergenic | 35.0% | |
| ATTGTTGCACTAAACTGTAG+CGG | - | chr2.4:24884962-24884981 | MS.gene062833:CDS | 35.0% | |
| ATTTGTACAATAGACAGTCC+TGG | + | chr2.4:24883688-24883707 | None:intergenic | 35.0% | |
| CAATCAAAATGAGGGATCAA+AGG | + | chr2.4:24880198-24880217 | None:intergenic | 35.0% | |
| CAGAAAATATTCATACCCTG+GGG | + | chr2.4:24883510-24883529 | None:intergenic | 35.0% | |
| CATGTAACTCCGATAATTCA+TGG | + | chr2.4:24883917-24883936 | None:intergenic | 35.0% | |
| CGCGTAGTTGTTAATTAAGT+AGG | - | chr2.4:24884688-24884707 | MS.gene062833:intron | 35.0% | |
| CGCGTCAATAAGGAAAATAA+CGG | + | chr2.4:24884672-24884691 | None:intergenic | 35.0% | |
| CGGCTTGTAGAAGAAATTAA+TGG | + | chr2.4:24881725-24881744 | None:intergenic | 35.0% | |
| CTTGGTTAAAAGATCGTCAT+AGG | + | chr2.4:24882669-24882688 | None:intergenic | 35.0% | |
| CTTTACAAGAACAATCCACT+GGG | + | chr2.4:24884411-24884430 | None:intergenic | 35.0% | |
| GCGAGACAGATAATTAAGAA+AGG | + | chr2.4:24884356-24884375 | None:intergenic | 35.0% | |
| GCGTCAATAAGGAAAATAAC+GGG | + | chr2.4:24884671-24884690 | None:intergenic | 35.0% | |
| GGGTTATTATCATTAGCAGA+AGG | + | chr2.4:24880148-24880167 | None:intergenic | 35.0% | |
| GTCAATTTGTGAAAGATTGC+AGG | - | chr2.4:24882262-24882281 | MS.gene062833:intron | 35.0% | |
| TAACACATAGTAGGATCACA+TGG | + | chr2.4:24882724-24882743 | None:intergenic | 35.0% | |
| TACATCACCAAAAAACACGT+GGG | - | chr2.4:24883309-24883328 | MS.gene062833:intron | 35.0% | |
| TATATGCTTACTCTTGAGTG+TGG | - | chr2.4:24881623-24881642 | MS.gene062833:CDS | 35.0% | |
| TATTATCCTTCGGATTCTGT+AGG | - | chr2.4:24885091-24885110 | MS.gene062833:CDS | 35.0% | |
| TGATGAGATTAAACCCTTGA+CGG | + | chr2.4:24880096-24880115 | None:intergenic | 35.0% | |
| TGTGATCCTACTATGTGTTA+AGG | - | chr2.4:24882724-24882743 | MS.gene062833:intron | 35.0% | |
| TGTTCAACATATGGCACAAT+TGG | + | chr2.4:24881472-24881491 | None:intergenic | 35.0% | |
| TTAACAACTACGCGTCAATA+AGG | + | chr2.4:24884682-24884701 | None:intergenic | 35.0% | |
| TTACATCACCAAAAAACACG+TGG | - | chr2.4:24883308-24883327 | MS.gene062833:intron | 35.0% | |
| TTCGTAAAGCTTAACTCAAC+TGG | - | chr2.4:24881758-24881777 | MS.gene062833:intron | 35.0% | |
| TTGTCCACAATTGGTGAATA+AGG | + | chr2.4:24881327-24881346 | None:intergenic | 35.0% | |
| ! | ACACCATCTTTTCTTGGTTT+AGG | - | chr2.4:24881280-24881299 | MS.gene062833:intron | 35.0% |
| ! | AGGAGAAACAATTTTACCCA+AGG | - | chr2.4:24881078-24881097 | MS.gene062833:intron | 35.0% |
| ! | ATCAGGTTTGGTACCATTAT+TGG | - | chr2.4:24885007-24885026 | MS.gene062833:CDS | 35.0% |
| ! | CAACTTTTCATTCAACTACG+TGG | - | chr2.4:24881577-24881596 | MS.gene062833:intron | 35.0% |
| ! | CTGAATTCAGATTCAGCTTT+TGG | + | chr2.4:24879983-24880002 | None:intergenic | 35.0% |
| ! | GGAGAAACAATTTTACCCAA+GGG | - | chr2.4:24881079-24881098 | MS.gene062833:intron | 35.0% |
| ! | GGTGTCAAGCATAACAATTT+TGG | + | chr2.4:24881789-24881808 | None:intergenic | 35.0% |
| ! | TGCTTTTGTGGAATTTGCAA+TGG | - | chr2.4:24884191-24884210 | MS.gene062833:intron | 35.0% |
| ! | TTATTTCTTCCTTCTTGAGC+AGG | - | chr2.4:24884928-24884947 | MS.gene062833:CDS | 35.0% |
| ! | TTTCTTGGTTTAGGTTACTG+AGG | - | chr2.4:24881289-24881308 | MS.gene062833:intron | 35.0% |
| !! | TTCAACTCGAATTGCTTTTG+TGG | - | chr2.4:24884179-24884198 | MS.gene062833:intron | 35.0% |
| !!! | AGAATTTTGGCTTTCTGACA+TGG | - | chr2.4:24882323-24882342 | MS.gene062833:intron | 35.0% |
| !!! | GATTTTTTTCTCAACAGCGA+TGG | - | chr2.4:24882240-24882259 | MS.gene062833:intron | 35.0% |
| !!! | GTATTTTGGGATAGTCTGTT+GGG | + | chr2.4:24882143-24882162 | None:intergenic | 35.0% |
| !!! | TGATTCGTTTTGATTGTGTC+TGG | - | chr2.4:24882854-24882873 | MS.gene062833:intron | 35.0% |
| !!! | TGGTTTTGAGTCCATTTTGT+TGG | + | chr2.4:24879963-24879982 | None:intergenic | 35.0% |
| AAAATATTCATACCCTGGGG+AGG | + | chr2.4:24883507-24883526 | None:intergenic | 40.0% | |
| AAAGCGTGTTTGCAATGCAA+TGG | - | chr2.4:24884639-24884658 | MS.gene062833:intron | 40.0% | |
| AAAGCTGAATCCTTTGGCTA+AGG | - | chr2.4:24880030-24880049 | MS.gene062833:intron | 40.0% | |
| AAGTGCAAATTTAAGTGGCG+TGG | - | chr2.4:24884778-24884797 | MS.gene062833:intron | 40.0% | |
| AATGATTCATGCACGTGATG+AGG | + | chr2.4:24884738-24884757 | None:intergenic | 40.0% | |
| AATGCGGATCACCACAAATT+CGG | + | chr2.4:24883210-24883229 | None:intergenic | 40.0% | |
| ACACAGAGCATGACAATATC+AGG | + | chr2.4:24881028-24881047 | None:intergenic | 40.0% | |
| ACATTGCCTTTCCATTTCAC+AGG | - | chr2.4:24884122-24884141 | MS.gene062833:intron | 40.0% | |
| ACTGCTCACAAGCATAAAGA+TGG | - | chr2.4:24882368-24882387 | MS.gene062833:intron | 40.0% | |
| AGACAGTATTCCAATGTTGC+TGG | - | chr2.4:24881435-24881454 | MS.gene062833:intron | 40.0% | |
| AGAGAAACCGATATGTTGAC+TGG | - | chr2.4:24884901-24884920 | MS.gene062833:intron | 40.0% | |
| ATGGATGCATTATGCTATCC+TGG | + | chr2.4:24883898-24883917 | None:intergenic | 40.0% | |
| CAAAACTCACAAAGCGATAG+AGG | - | chr2.4:24882468-24882487 | MS.gene062833:intron | 40.0% | |
| CAACATATGGCACAATTGGA+GGG | + | chr2.4:24881468-24881487 | None:intergenic | 40.0% | |
| CATAAAATGTCATCGCGTTG+CGG | + | chr2.4:24882289-24882308 | None:intergenic | 40.0% | |
| CCTTTACAAGAACAATCCAC+TGG | + | chr2.4:24884412-24884431 | None:intergenic | 40.0% | |
| GCTACAGTTTAGTGCAACAA+TGG | + | chr2.4:24884963-24884982 | None:intergenic | 40.0% | |
| GGAAAAAACTCCTTAGCCAA+AGG | + | chr2.4:24880043-24880062 | None:intergenic | 40.0% | |
| GGTCAATAAGTAGCACTTCT+TGG | - | chr2.4:24883846-24883865 | MS.gene062833:intron | 40.0% | |
| GTTCACAAAGCTGAATCCTT+TGG | - | chr2.4:24880024-24880043 | MS.gene062833:intron | 40.0% | |
| GTTTGAATTTCACTACGCTG+CGG | + | chr2.4:24884564-24884583 | None:intergenic | 40.0% | |
| TAAACGGCCAGTCAACATAT+CGG | + | chr2.4:24884911-24884930 | None:intergenic | 40.0% | |
| TAACCAAGTCCACACTAGAA+GGG | - | chr2.4:24882681-24882700 | MS.gene062833:intron | 40.0% | |
| TCAACATATGGCACAATTGG+AGG | + | chr2.4:24881469-24881488 | None:intergenic | 40.0% | |
| TCTTCTACAAGCCGTATAGA+AGG | - | chr2.4:24881731-24881750 | MS.gene062833:intron | 40.0% | |
| TTAACCAAGTCCACACTAGA+AGG | - | chr2.4:24882680-24882699 | MS.gene062833:intron | 40.0% | |
| TTCAGCTGATGCCAACAAAA+TGG | - | chr2.4:24879949-24879968 | MS.gene062833:CDS | 40.0% | |
| TTGTGTCTGGACTGTGAATT+TGG | - | chr2.4:24882867-24882886 | MS.gene062833:intron | 40.0% | |
| TTGTTAAATATCGGCCATGG+CGG | - | chr2.4:24882205-24882224 | MS.gene062833:intron | 40.0% | |
| ! | AATCCAGGTCAGATTTTCGA+TGG | + | chr2.4:24882519-24882538 | None:intergenic | 40.0% |
| ! | AGGTTTGGTACCATTATTGG+AGG | - | chr2.4:24885010-24885029 | MS.gene062833:CDS | 40.0% |
| ! | ATCCAGGTCAGATTTTCGAT+GGG | + | chr2.4:24882518-24882537 | None:intergenic | 40.0% |
| ! | ATTGTTTCTCCTCTGCAAGA+AGG | + | chr2.4:24881070-24881089 | None:intergenic | 40.0% |
| ! | CATCACTCCTAACCATTTTC+TGG | - | chr2.4:24880111-24880130 | MS.gene062833:CDS | 40.0% |
| ! | GAAACAATTTTACCCAAGGG+AGG | - | chr2.4:24881082-24881101 | MS.gene062833:intron | 40.0% |
| ! | GTCATTGATTGCCGAATTTG+TGG | - | chr2.4:24883196-24883215 | MS.gene062833:intron | 40.0% |
| ! | GTGTTGACCAGAAAATGGTT+AGG | + | chr2.4:24880121-24880140 | None:intergenic | 40.0% |
| ! | GTGTTGTTAAATATCGGCCA+TGG | - | chr2.4:24882202-24882221 | MS.gene062833:intron | 40.0% |
| !! | CCAGTGGATTGTTCTTGTAA+AGG | - | chr2.4:24884409-24884428 | MS.gene062833:intron | 40.0% |
| !! | GCTTAGTGTTGACCAGAAAA+TGG | + | chr2.4:24880126-24880145 | None:intergenic | 40.0% |
| !!! | CGTATTTTGGGATAGTCTGT+TGG | + | chr2.4:24882144-24882163 | None:intergenic | 40.0% |
| AACCAAGTCCACACTAGAAG+GGG | - | chr2.4:24882682-24882701 | MS.gene062833:intron | 45.0% | |
| AAGTGTGCCTCGAAATGCAT+AGG | + | chr2.4:24884383-24884402 | None:intergenic | 45.0% | |
| AATCATGATCATGGCCGTCA+AGG | - | chr2.4:24880079-24880098 | MS.gene062833:intron | 45.0% | |
| ACTTACCCTACAGAATCCGA+AGG | + | chr2.4:24885100-24885119 | None:intergenic | 45.0% | |
| AGAAGGGGAGGAATACTCAT+AGG | - | chr2.4:24882697-24882716 | MS.gene062833:intron | 45.0% | |
| ATCATGATCATGGCCGTCAA+GGG | - | chr2.4:24880080-24880099 | MS.gene062833:intron | 45.0% | |
| CATGTCAACAGATGGTGCAA+GGG | - | chr2.4:24883390-24883409 | MS.gene062833:intron | 45.0% | |
| CGTAGTAATGCTTCGTTCTC+AGG | - | chr2.4:24882595-24882614 | MS.gene062833:intron | 45.0% | |
| CTTCGTTCTCAGGATCGAAA+TGG | - | chr2.4:24882605-24882624 | MS.gene062833:intron | 45.0% | |
| CTTTGAATCATCATGTGGCG+AGG | - | chr2.4:24884026-24884045 | MS.gene062833:intron | 45.0% | |
| GCAAAGCGAAGAACTGAATG+CGG | + | chr2.4:24883226-24883245 | None:intergenic | 45.0% | |
| GCATGTAAGTGACGTGAGAA+TGG | - | chr2.4:24881185-24881204 | MS.gene062833:intron | 45.0% | |
| GCGTAACCTGTGAAATGGAA+AGG | + | chr2.4:24884131-24884150 | None:intergenic | 45.0% | |
| GCTTGGATACTATCCAGTGA+GGG | - | chr2.4:24883438-24883457 | MS.gene062833:intron | 45.0% | |
| GGAATGTAGGATTCACAGGA+AGG | + | chr2.4:24883486-24883505 | None:intergenic | 45.0% | |
| GGGAGAAATTCCAGCAACAT+TGG | + | chr2.4:24881448-24881467 | None:intergenic | 45.0% | |
| GTGTGGTCATCTGAGTTATG+AGG | - | chr2.4:24881640-24881659 | MS.gene062833:CDS | 45.0% | |
| GTTGAACGGAAGATCGCTAA+AGG | - | chr2.4:24881110-24881129 | MS.gene062833:intron | 45.0% | |
| TAGGAGAGAAACCATGCATC+AGG | - | chr2.4:24880481-24880500 | MS.gene062833:intron | 45.0% | |
| TCATGTCAACAGATGGTGCA+AGG | - | chr2.4:24883389-24883408 | MS.gene062833:intron | 45.0% | |
| TCGCAGTTGTGTGTGAGTTT+CGG | - | chr2.4:24881834-24881853 | MS.gene062833:CDS | 45.0% | |
| TGACGGCCATGATCATGATT+AGG | + | chr2.4:24880079-24880098 | None:intergenic | 45.0% | |
| TGCTTGGATACTATCCAGTG+AGG | - | chr2.4:24883437-24883456 | MS.gene062833:intron | 45.0% | |
| TTGTTACAGGGAGGTCATGA+AGG | - | chr2.4:24882428-24882447 | MS.gene062833:intron | 45.0% | |
| ! | AAACTGTAGCGGCATGCTTT+TGG | - | chr2.4:24884973-24884992 | MS.gene062833:CDS | 45.0% |
| ! | AACTGTAGCGGCATGCTTTT+GGG | - | chr2.4:24884974-24884993 | MS.gene062833:CDS | 45.0% |
| ! | ATTTTACCCAAGGGAGGAGA+AGG | - | chr2.4:24881088-24881107 | MS.gene062833:intron | 45.0% |
| ! | CTACAATGTGTTTTCCGCAG+TGG | - | chr2.4:24882492-24882511 | MS.gene062833:intron | 45.0% |
| ! | GCAGTGTTATCGATTGCAGA+TGG | + | chr2.4:24882353-24882372 | None:intergenic | 45.0% |
| ! | GGAAGGATAGCAGTTTTCGA+AGG | + | chr2.4:24883469-24883488 | None:intergenic | 45.0% |
| ! | GGATAGCAGTTTTCGAAGGA+AGG | + | chr2.4:24883465-24883484 | None:intergenic | 45.0% |
| ! | TGAATTGCGTTTGTGCTGCT+TGG | - | chr2.4:24880302-24880321 | MS.gene062833:intron | 45.0% |
| ! | TGACTGTGTGCGCGTATTTT+GGG | + | chr2.4:24882156-24882175 | None:intergenic | 45.0% |
| ! | TGGAAGTTTTGCATCACCAG+AGG | - | chr2.4:24882388-24882407 | MS.gene062833:intron | 45.0% |
| ! | TGGTTTAGGTTACTGAGGAG+CGG | - | chr2.4:24881294-24881313 | MS.gene062833:intron | 45.0% |
| !! | CAATTCGAGTTGAATGCACC+TGG | + | chr2.4:24884173-24884192 | None:intergenic | 45.0% |
| !! | GCAGCCTTATTCACCAATTG+TGG | - | chr2.4:24881320-24881339 | MS.gene062833:intron | 45.0% |
| !! | TTTTGGGAACTCAGCCTATC+AGG | - | chr2.4:24884990-24885009 | MS.gene062833:CDS | 45.0% |
| !! | ATGTTATAATTATTTAAATA+TGG | + | chr2.4:24883152-24883171 | None:intergenic | 5.0% |
| AAAGACTCCAGTGAGGCCAA+GGG | - | chr2.4:24885125-24885144 | MS.gene062833:CDS | 50.0% | |
| ACATGCAGTCGGATGATGAG+CGG | - | chr2.4:24883652-24883671 | MS.gene062833:intron | 50.0% | |
| AGGATCGCCATTACAGCTCA+TGG | + | chr2.4:24882649-24882668 | None:intergenic | 50.0% | |
| ATCCAAGCACAGTACCACCA+AGG | + | chr2.4:24883426-24883445 | None:intergenic | 50.0% | |
| ATGAGCGGGAAATGTGTACC+AGG | - | chr2.4:24883667-24883686 | MS.gene062833:intron | 50.0% | |
| CAAGCGCGTAACCTGTGAAA+TGG | + | chr2.4:24884136-24884155 | None:intergenic | 50.0% | |
| CAAGGGAGGAGAAGGTTGAA+CGG | - | chr2.4:24881096-24881115 | MS.gene062833:intron | 50.0% | |
| CACGCTTCCATGAGCTGTAA+TGG | - | chr2.4:24882639-24882658 | MS.gene062833:intron | 50.0% | |
| CACTTTCTGCCTGCTCAAGA+AGG | + | chr2.4:24884940-24884959 | None:intergenic | 50.0% | |
| CGCAAGACCTATGCATTTCG+AGG | - | chr2.4:24884373-24884392 | MS.gene062833:intron | 50.0% | |
| GAAACTCACACACAACTGCG+AGG | + | chr2.4:24881835-24881854 | None:intergenic | 50.0% | |
| GAATCCTACATTCCTCCCCA+GGG | - | chr2.4:24883492-24883511 | MS.gene062833:intron | 50.0% | |
| GGAACTCAGCCTATCAGGTT+TGG | - | chr2.4:24884995-24885014 | MS.gene062833:CDS | 50.0% | |
| GGGAGGAATGTAGGATTCAC+AGG | + | chr2.4:24883490-24883509 | None:intergenic | 50.0% | |
| GTATTCCTCCCCTTCTAGTG+TGG | + | chr2.4:24882693-24882712 | None:intergenic | 50.0% | |
| GTCCTTCAAAGACTCCAGTG+AGG | - | chr2.4:24885118-24885137 | MS.gene062833:CDS | 50.0% | |
| GTTATGCTTGACACCGTCTC+CGG | - | chr2.4:24881794-24881813 | MS.gene062833:intron | 50.0% | |
| GTTCAACCTTCTCCTCCCTT+GGG | + | chr2.4:24881097-24881116 | None:intergenic | 50.0% | |
| TGAATCCTACATTCCTCCCC+AGG | - | chr2.4:24883491-24883510 | MS.gene062833:intron | 50.0% | |
| TTATGCTTGACACCGTCTCC+GGG | - | chr2.4:24881795-24881814 | MS.gene062833:intron | 50.0% | |
| TTGGGATAGTCTGTTGGGTG+CGG | + | chr2.4:24882138-24882157 | None:intergenic | 50.0% | |
| TTTCACAGGTTACGCGCTTG+AGG | - | chr2.4:24884136-24884155 | MS.gene062833:intron | 50.0% | |
| TTTGCACTGCCTTCTTGCAG+AGG | - | chr2.4:24881058-24881077 | MS.gene062833:CDS | 50.0% | |
| ! | AACCTTGGTGGTACTGTGCT+TGG | - | chr2.4:24883421-24883440 | MS.gene062833:intron | 50.0% |
| ! | AGATTTTCGATGGGCCACTG+CGG | + | chr2.4:24882509-24882528 | None:intergenic | 50.0% |
| ! | GGGTTTGGGACAACAAATCC+AGG | + | chr2.4:24882534-24882553 | None:intergenic | 50.0% |
| ! | GTGACTGTGTGCGCGTATTT+TGG | + | chr2.4:24882157-24882176 | None:intergenic | 50.0% |
| ! | GTTACGCGCTTGAGGCTTTT+GGG | - | chr2.4:24884144-24884163 | MS.gene062833:intron | 50.0% |
| ! | TTACGCGCTTGAGGCTTTTG+GGG | - | chr2.4:24884145-24884164 | MS.gene062833:intron | 50.0% |
| !! | AGGGCAGCTTTAAACCTTGG+TGG | - | chr2.4:24883409-24883428 | MS.gene062833:intron | 50.0% |
| !! | GCAAGGGCAGCTTTAAACCT+TGG | - | chr2.4:24883406-24883425 | MS.gene062833:intron | 50.0% |
| AGGCACACTTTCGTTCCCAG+TGG | - | chr2.4:24884393-24884412 | MS.gene062833:intron | 55.0% | |
| CAAAGACTCCAGTGAGGCCA+AGG | - | chr2.4:24885124-24885143 | MS.gene062833:CDS | 55.0% | |
| CAAGTCCACACTAGAAGGGG+AGG | - | chr2.4:24882685-24882704 | MS.gene062833:intron | 55.0% | |
| CATACCCTGGGGAGGAATGT+AGG | + | chr2.4:24883499-24883518 | None:intergenic | 55.0% | |
| CATGCAGTCGGATGATGAGC+GGG | - | chr2.4:24883653-24883672 | MS.gene062833:intron | 55.0% | |
| CGTTCAACCTTCTCCTCCCT+TGG | + | chr2.4:24881098-24881117 | None:intergenic | 55.0% | |
| CTCCCCTTCTAGTGTGGACT+TGG | + | chr2.4:24882687-24882706 | None:intergenic | 55.0% | |
| GATACAGGACGAGCAACCCT+TGG | + | chr2.4:24885144-24885163 | None:intergenic | 55.0% | |
| GGCCCATCGAAAATCTGACC+TGG | - | chr2.4:24882513-24882532 | MS.gene062833:intron | 55.0% | |
| GGCCTCACTGGAGTCTTTGA+AGG | + | chr2.4:24885123-24885142 | None:intergenic | 55.0% | |
| TATGCTTGACACCGTCTCCG+GGG | - | chr2.4:24881796-24881815 | MS.gene062833:intron | 55.0% | |
| TGGGATAGTCTGTTGGGTGC+GGG | + | chr2.4:24882137-24882156 | None:intergenic | 55.0% | |
| TTCGAAGGAAGGACCCTCAC+TGG | + | chr2.4:24883454-24883473 | None:intergenic | 55.0% | |
| ! | CAGCTCATGGAAGCGTGAGA+TGG | + | chr2.4:24882636-24882655 | None:intergenic | 55.0% |
| ! | GGTTACGCGCTTGAGGCTTT+TGG | - | chr2.4:24884143-24884162 | MS.gene062833:intron | 55.0% |
| ! | TACGCGCTTGAGGCTTTTGG+GGG | - | chr2.4:24884146-24884165 | MS.gene062833:intron | 55.0% |
| !!! | GTGTGCGCCCACGTGTTTTT+TGG | + | chr2.4:24883319-24883338 | None:intergenic | 55.0% |
| ACACACAACTGCGAGGTCCC+GGG | + | chr2.4:24881828-24881847 | None:intergenic | 60.0% | |
| CACACACAACTGCGAGGTCC+CGG | + | chr2.4:24881829-24881848 | None:intergenic | 60.0% | |
| GATAGTCTGTTGGGTGCGGG+AGG | + | chr2.4:24882134-24882153 | None:intergenic | 60.0% | |
| TCCTCCATCGCATTCCGCCA+TGG | + | chr2.4:24882222-24882241 | None:intergenic | 60.0% | |
| !! | CTTGAGGCTTTTGGGGGACC+AGG | - | chr2.4:24884152-24884171 | MS.gene062833:intron | 60.0% |
| AGTCTGTTGGGTGCGGGAGG+AGG | + | chr2.4:24882131-24882150 | None:intergenic | 65.0% | |
| CGAGCAACCCTTGGCCTCAC+TGG | + | chr2.4:24885135-24885154 | None:intergenic | 65.0% | |
| GTCTGTTGGGTGCGGGAGGA+GGG | + | chr2.4:24882130-24882149 | None:intergenic | 65.0% | |
| ! | GCCATGGCGGAATGCGATGG+AGG | - | chr2.4:24882218-24882237 | MS.gene062833:intron | 65.0% |
| ! | TCGGCCATGGCGGAATGCGA+TGG | - | chr2.4:24882215-24882234 | MS.gene062833:intron | 65.0% |
| CCGGGTTCGAACCCCGGAGA+CGG | + | chr2.4:24881810-24881829 | None:intergenic | 70.0% | |
| CCGTCTCCGGGGTTCGAACC+CGG | - | chr2.4:24881807-24881826 | MS.gene062833:intron | 70.0% | |
| CGTCTCCGGGGTTCGAACCC+GGG | - | chr2.4:24881808-24881827 | MS.gene062833:intron | 70.0% | |
| GAGGTCCCGGGTTCGAACCC+CGG | + | chr2.4:24881816-24881835 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 24879923 | 24885170 | 24879923 | ID=MS.gene062833 |
| chr2.4 | mRNA | 24879923 | 24885170 | 24879923 | ID=MS.gene062833.t1;Parent=MS.gene062833 |
| chr2.4 | exon | 24884913 | 24885170 | 24884913 | ID=MS.gene062833.t1.exon1;Parent=MS.gene062833.t1 |
| chr2.4 | CDS | 24884913 | 24885170 | 24884913 | ID=cds.MS.gene062833.t1;Parent=MS.gene062833.t1 |
| chr2.4 | exon | 24883905 | 24884015 | 24883905 | ID=MS.gene062833.t1.exon2;Parent=MS.gene062833.t1 |
| chr2.4 | CDS | 24883905 | 24884015 | 24883905 | ID=cds.MS.gene062833.t1;Parent=MS.gene062833.t1 |
| chr2.4 | exon | 24883747 | 24883791 | 24883747 | ID=MS.gene062833.t1.exon3;Parent=MS.gene062833.t1 |
| chr2.4 | CDS | 24883747 | 24883791 | 24883747 | ID=cds.MS.gene062833.t1;Parent=MS.gene062833.t1 |
| chr2.4 | exon | 24881825 | 24881897 | 24881825 | ID=MS.gene062833.t1.exon4;Parent=MS.gene062833.t1 |
| chr2.4 | CDS | 24881825 | 24881897 | 24881825 | ID=cds.MS.gene062833.t1;Parent=MS.gene062833.t1 |
| chr2.4 | exon | 24881580 | 24881692 | 24881580 | ID=MS.gene062833.t1.exon5;Parent=MS.gene062833.t1 |
| chr2.4 | CDS | 24881580 | 24881692 | 24881580 | ID=cds.MS.gene062833.t1;Parent=MS.gene062833.t1 |
| chr2.4 | exon | 24881374 | 24881433 | 24881374 | ID=MS.gene062833.t1.exon6;Parent=MS.gene062833.t1 |
| chr2.4 | CDS | 24881374 | 24881433 | 24881374 | ID=cds.MS.gene062833.t1;Parent=MS.gene062833.t1 |
| chr2.4 | exon | 24881046 | 24881093 | 24881046 | ID=MS.gene062833.t1.exon7;Parent=MS.gene062833.t1 |
| chr2.4 | CDS | 24881046 | 24881093 | 24881046 | ID=cds.MS.gene062833.t1;Parent=MS.gene062833.t1 |
| chr2.4 | exon | 24880881 | 24880949 | 24880881 | ID=MS.gene062833.t1.exon8;Parent=MS.gene062833.t1 |
| chr2.4 | CDS | 24880881 | 24880949 | 24880881 | ID=cds.MS.gene062833.t1;Parent=MS.gene062833.t1 |
| chr2.4 | exon | 24880082 | 24880143 | 24880082 | ID=MS.gene062833.t1.exon9;Parent=MS.gene062833.t1 |
| chr2.4 | CDS | 24880082 | 24880143 | 24880082 | ID=cds.MS.gene062833.t1;Parent=MS.gene062833.t1 |
| chr2.4 | exon | 24879923 | 24879980 | 24879923 | ID=MS.gene062833.t1.exon10;Parent=MS.gene062833.t1 |
| chr2.4 | CDS | 24879923 | 24879980 | 24879923 | ID=cds.MS.gene062833.t1;Parent=MS.gene062833.t1 |
| Gene Sequence |
| Protein sequence |
