Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062935.t1 | XP_003607085.1 | 94.7 | 569 | 28 | 2 | 1 | 567 | 1 | 569 | 7.00E-305 | 1055.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062935.t1 | Q9SI61 | 76.2 | 572 | 111 | 7 | 1 | 553 | 1 | 566 | 9.4e-242 | 837.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062935.t1 | G7JL07 | 94.7 | 569 | 28 | 2 | 1 | 567 | 1 | 569 | 5.0e-305 | 1055.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene33554 | MS.gene062935 | PPI |
MS.gene47076 | MS.gene062935 | PPI |
MS.gene55438 | MS.gene062935 | PPI |
MS.gene074158 | MS.gene062935 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062935.t1 | MTR_4g072110 | 98.067 | 569 | 9 | 2 | 1 | 567 | 1 | 569 | 0.0 | 1134 |
MS.gene062935.t1 | MTR_3g117590 | 77.228 | 404 | 61 | 2 | 128 | 531 | 27 | 399 | 0.0 | 629 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062935.t1 | AT4G34740 | 81.944 | 504 | 81 | 2 | 51 | 553 | 67 | 561 | 0.0 | 847 |
MS.gene062935.t1 | AT2G16570 | 82.863 | 496 | 83 | 2 | 60 | 553 | 71 | 566 | 0.0 | 845 |
MS.gene062935.t1 | AT4G38880 | 70.942 | 499 | 135 | 5 | 31 | 526 | 34 | 525 | 0.0 | 713 |
Find 154 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGATAGCTGTTCCTGATTC+TGG | 0.178498 | 4.2:+35771848 | MS.gene062935:CDS |
AGAGAAGGGAGAGAGGGTTT+TGG | 0.224365 | 4.2:-35770870 | None:intergenic |
GGATGAGTGTTGAAGAAATA+AGG | 0.235614 | 4.2:+35772212 | MS.gene062935:CDS |
GGGTTTAGGCCTTTGGTTAT+GGG | 0.237862 | 4.2:+35771542 | MS.gene062935:CDS |
TGGGTTTAGGCCTTTGGTTA+TGG | 0.266896 | 4.2:+35771541 | MS.gene062935:CDS |
GAGAGGATGATGTCGGAAAT+TGG | 0.268968 | 4.2:-35770936 | None:intergenic |
ATTATTGGTTCTTGTTACTA+TGG | 0.269970 | 4.2:+35772151 | MS.gene062935:CDS |
ATTGCAAGTCCACCAATTAT+TGG | 0.272119 | 4.2:+35772136 | MS.gene062935:CDS |
TGACGATCCCGGCGCCTTCT+TGG | 0.277743 | 4.2:-35771100 | None:intergenic |
GTGCTGTGCTTGAAGGTAAA+AGG | 0.278979 | 4.2:+35772017 | MS.gene062935:CDS |
TCAACAATTCTCAAAATAAA+AGG | 0.280388 | 4.2:-35771440 | None:intergenic |
GTAGCAGTATTCACCTCTTT+TGG | 0.290374 | 4.2:-35772454 | None:intergenic |
TGAGGGATCCGTTTGGGTTT+AGG | 0.298862 | 4.2:+35771528 | MS.gene062935:CDS |
TCCGTTTGGGTTTAGGCCTT+TGG | 0.309909 | 4.2:+35771535 | MS.gene062935:CDS |
GTGATTGTGGTTGATAATAA+TGG | 0.317436 | 4.2:+35771659 | MS.gene062935:CDS |
TGCGGAGTTGTTGGAATCTA+TGG | 0.322709 | 4.2:+35771020 | MS.gene062935:CDS |
AGAGCTAAGCTTGAAGATAA+AGG | 0.329947 | 4.2:+35771350 | MS.gene062935:CDS |
AGTGAGGAAAAGGGGTTTAC+GGG | 0.333438 | 4.2:-35770901 | None:intergenic |
CTCTTAACCTTGAGCTCTCT+TGG | 0.333802 | 4.2:-35772352 | None:intergenic |
TGATGGTTTGAATGGGAGTT+TGG | 0.341680 | 4.2:+35772393 | MS.gene062935:CDS |
AAGTGAGGAAAAGGGGTTTA+CGG | 0.349379 | 4.2:-35770902 | None:intergenic |
TTGAGCCGTCTCAGAAGATT+AGG | 0.349524 | 4.2:+35771960 | MS.gene062935:CDS |
TTGAGCTCTCTTGGTTCAAC+AGG | 0.352244 | 4.2:-35772343 | None:intergenic |
TGGCCGATGGCTAAGCTTCC+GGG | 0.363060 | 4.2:-35771206 | None:intergenic |
CGCCTTCTTGGCCGCGGTGT+TGG | 0.365653 | 4.2:-35771088 | None:intergenic |
TTTGTTGCTGGGTACCGTTT+TGG | 0.372205 | 4.2:+35771278 | MS.gene062935:CDS |
CCGGTCCGTGCTGTGCTTGA+AGG | 0.375757 | 4.2:+35772010 | MS.gene062935:CDS |
AGAGGATGATGTCGGAAATT+GGG | 0.376272 | 4.2:-35770935 | None:intergenic |
GGGAGGGAGAAGGGATGGTT+TGG | 0.381402 | 4.2:-35770817 | None:intergenic |
GTTGGTGACTTTGTTGATGA+TGG | 0.383115 | 4.2:+35772376 | MS.gene062935:CDS |
TAGTAACAAGAACCAATAAT+TGG | 0.384192 | 4.2:-35772148 | None:intergenic |
CAGAGGAGTTGATATCTAAT+AGG | 0.384260 | 4.2:+35772191 | MS.gene062935:CDS |
GAGAAGGGATGGTTTGGTTA+GGG | 0.384271 | 4.2:-35770811 | None:intergenic |
GATTCAATCGCTCTGTTTGA+TGG | 0.385949 | 4.2:+35771682 | MS.gene062935:CDS |
CTAATCAACCCTTGTTGAAA+AGG | 0.394989 | 4.2:-35771911 | None:intergenic |
GAAGATTGTGAGGTTGCTTA+AGG | 0.403149 | 4.2:+35772084 | MS.gene062935:CDS |
GGAGAAGGGATGGTTTGGTT+AGG | 0.409516 | 4.2:-35770812 | None:intergenic |
CGTGAAGAGTGCGGAGTTGT+TGG | 0.409849 | 4.2:+35771011 | MS.gene062935:CDS |
TTTGTTGATGATGGTTTGAA+TGG | 0.415105 | 4.2:+35772385 | MS.gene062935:CDS |
ATGGCCGATGGCTAAGCTTC+CGG | 0.422840 | 4.2:-35771207 | None:intergenic |
CAAGAGAGCTCAAGGTTAAG+AGG | 0.423035 | 4.2:+35772353 | MS.gene062935:CDS |
GTCGGAGAGAGAAGGGAGAG+AGG | 0.429052 | 4.2:-35770877 | None:intergenic |
ATACTATGCAAGCTATTGAT+TGG | 0.430909 | 4.2:-35772268 | None:intergenic |
TTGTTGGGAGGGAGAAGGGA+TGG | 0.433208 | 4.2:-35770822 | None:intergenic |
GATGAGTGTTGAAGAAATAA+GGG | 0.433460 | 4.2:+35772213 | MS.gene062935:CDS |
GCAGCCACAACACCAGAATC+AGG | 0.436019 | 4.2:-35771860 | None:intergenic |
TTGAAGAAGCGGTTGTTGTT+GGG | 0.436751 | 4.2:-35770837 | None:intergenic |
TTGCTGTGAGGGATCCGTTT+GGG | 0.437418 | 4.2:+35771522 | MS.gene062935:CDS |
TTTGGAGGAAGTGAGGAAAA+GGG | 0.443047 | 4.2:-35770910 | None:intergenic |
GTTGTTGTTGGGAGGGAGAA+GGG | 0.448820 | 4.2:-35770826 | None:intergenic |
GTTGAAGAAGCGGTTGTTGT+TGG | 0.450569 | 4.2:-35770838 | None:intergenic |
GGAACAAATTGATGGTGGTT+GGG | 0.451957 | 4.2:+35772414 | MS.gene062935:CDS |
TGATTGTGGTTGATAATAAT+GGG | 0.454958 | 4.2:+35771660 | MS.gene062935:CDS |
AATAGCTTGCATAGTATGTT+GGG | 0.456007 | 4.2:+35772274 | MS.gene062935:CDS |
TCTGGTGTTGTGGCTGCGCT+TGG | 0.458740 | 4.2:+35771866 | MS.gene062935:CDS |
TATGAATCACGTAGGCGATT+TGG | 0.462036 | 4.2:+35771785 | MS.gene062935:CDS |
CAATAGCTTGCATAGTATGT+TGG | 0.465848 | 4.2:+35772273 | MS.gene062935:CDS |
ATCACAACATCACAATCAAC+AGG | 0.467162 | 4.2:-35771830 | None:intergenic |
TTTGTTATGCTTGTTTCTCT+GGG | 0.472388 | 4.2:+35772314 | MS.gene062935:CDS |
CTTGGTTATGCTGCGAAAGC+CGG | 0.474447 | 4.2:+35771884 | MS.gene062935:CDS |
GGTTGTTGTTGGGAGGGAGA+AGG | 0.476572 | 4.2:-35770827 | None:intergenic |
GGGAGTTTGGAACAAATTGA+TGG | 0.485386 | 4.2:+35772406 | MS.gene062935:CDS |
CATGTTCGTTATTCTACTGC+TGG | 0.487415 | 4.2:+35771227 | MS.gene062935:CDS |
TTGAAGAACGTTGTTGTTAA+CGG | 0.487917 | 4.2:-35771123 | None:intergenic |
GTTGCTGTGAGGGATCCGTT+TGG | 0.488507 | 4.2:+35771521 | MS.gene062935:CDS |
GTTGTTAACGGTGACGATCC+CGG | 0.488654 | 4.2:-35771111 | None:intergenic |
ACCGCGGCCAAGAAGGCGCC+GGG | 0.491418 | 4.2:+35771093 | MS.gene062935:CDS |
GGAAAACATCCTCGTCTTGT+GGG | 0.492354 | 4.2:-35770971 | None:intergenic |
CTCCAACACCGCGGCCAAGA+AGG | 0.497456 | 4.2:+35771086 | MS.gene062935:CDS |
CTTCAATCCATCACCGGTGT+TGG | 0.497665 | 4.2:+35771140 | MS.gene062935:CDS |
GGTTTAGGCCTTTGGTTATG+GGG | 0.500914 | 4.2:+35771543 | MS.gene062935:CDS |
TGAGCCGTCTCAGAAGATTA+GGG | 0.501845 | 4.2:+35771961 | MS.gene062935:CDS |
GACAAGACCAACACCGGTGA+TGG | 0.504668 | 4.2:-35771147 | None:intergenic |
TGCTCAAAGATACACTGCTT+CGG | 0.506723 | 4.2:-35771716 | None:intergenic |
TGGAACAAATTGATGGTGGT+TGG | 0.506884 | 4.2:+35772413 | MS.gene062935:CDS |
GAGCTCAAGGTTAAGAGGGT+TGG | 0.509152 | 4.2:+35772358 | MS.gene062935:CDS |
TTTGTTGGAGAGGATGATGT+CGG | 0.510776 | 4.2:-35770943 | None:intergenic |
TGGAAGAAAAGCAAGTGAAT+CGG | 0.512363 | 4.2:-35772248 | None:intergenic |
AAAGAGGTGAATACTGCTAC+TGG | 0.516631 | 4.2:+35772457 | MS.gene062935:CDS |
TTCTATTGTGTTTGTTACCG+AGG | 0.517084 | 4.2:+35771490 | MS.gene062935:CDS |
TTGGAGGAAGTGAGGAAAAG+GGG | 0.517107 | 4.2:-35770909 | None:intergenic |
CACCGCGGCCAAGAAGGCGC+CGG | 0.518932 | 4.2:+35771092 | MS.gene062935:CDS |
CACGAGGCTTGTCGTCGTTG+AGG | 0.520175 | 4.2:-35770992 | None:intergenic |
GTGAGGTTGCTTAAGGAAGC+TGG | 0.520822 | 4.2:+35772091 | MS.gene062935:CDS |
GAAAAGGGGTTTACGGGTGT+CGG | 0.521257 | 4.2:-35770895 | None:intergenic |
AAACGGTACCCAGCAACAAA+AGG | 0.521430 | 4.2:-35771275 | None:intergenic |
TCGGAGAGAGAAGGGAGAGA+GGG | 0.522057 | 4.2:-35770876 | None:intergenic |
TCTCAGAAGATTAGGGACTT+TGG | 0.526450 | 4.2:+35771968 | MS.gene062935:CDS |
AGGAAAACATCCTCGTCTTG+TGG | 0.526596 | 4.2:-35770972 | None:intergenic |
TTGTTGATGATGGTTTGAAT+GGG | 0.530340 | 4.2:+35772386 | MS.gene062935:CDS |
GGATAAGCTTGTTGCTGTGA+GGG | 0.531703 | 4.2:+35771511 | MS.gene062935:CDS |
TCCCGGCGCCTTCTTGGCCG+CGG | 0.532251 | 4.2:-35771094 | None:intergenic |
AAGAAGCGGTTGTTGTTGGG+AGG | 0.533885 | 4.2:-35770834 | None:intergenic |
GGAGGGCTAAGTAGCAGAGA+CGG | 0.535500 | 4.2:-35771058 | None:intergenic |
TGTTCCTGATTCTGGTGTTG+TGG | 0.536036 | 4.2:+35771856 | MS.gene062935:CDS |
ACAAAACTCGATCAGTTACC+CGG | 0.539167 | 4.2:+35771188 | MS.gene062935:CDS |
TTTCCCTGGTGAGGTGATTG+TGG | 0.539786 | 4.2:+35771646 | MS.gene062935:CDS |
TGGTTCTTGTTACTATGGTG+TGG | 0.539936 | 4.2:+35772156 | MS.gene062935:CDS |
GATATCAACTCCTCTGAGCT+AGG | 0.540111 | 4.2:-35772184 | None:intergenic |
AAGATACACTGCTTCGGCTG+CGG | 0.540981 | 4.2:-35771710 | None:intergenic |
AGAAGCGGTTGTTGTTGGGA+GGG | 0.543704 | 4.2:-35770833 | None:intergenic |
GAGGGCTAAGTAGCAGAGAC+GGG | 0.544400 | 4.2:-35771057 | None:intergenic |
TCAACCACAATCACCTCACC+AGG | 0.547964 | 4.2:-35771650 | None:intergenic |
GGCCGCGGTGTTGGAGAGCG+TGG | 0.550054 | 4.2:-35771079 | None:intergenic |
ACCAAAGGCCTAAACCCAAA+CGG | 0.556825 | 4.2:-35771536 | None:intergenic |
TTACGGGTGTCGGAGAGAGA+AGG | 0.557004 | 4.2:-35770885 | None:intergenic |
GATTGAAGCTACTTATGAGA+GGG | 0.557263 | 4.2:+35771619 | MS.gene062935:CDS |
TGCTGTGCTTGAAGGTAAAA+GGG | 0.558567 | 4.2:+35772018 | MS.gene062935:CDS |
TAACAAGAACCAATAATTGG+TGG | 0.560555 | 4.2:-35772145 | None:intergenic |
GCGGTGTTGGAGAGCGTGGA+GGG | 0.560878 | 4.2:-35771075 | None:intergenic |
CCCTTGTTGAAAAGGAACAC+CGG | 0.561790 | 4.2:-35771903 | None:intergenic |
AGCCAACAGAAATCCAAAAG+AGG | 0.563771 | 4.2:+35772441 | MS.gene062935:CDS |
TTAGGCCTTTGGTTATGGGG+AGG | 0.567193 | 4.2:+35771546 | MS.gene062935:CDS |
CACAGCAACAAGCTTATCCT+CGG | 0.568347 | 4.2:-35771507 | None:intergenic |
GATGCATGTGAGAAGCTTGA+AGG | 0.569398 | 4.2:+35771461 | MS.gene062935:CDS |
CAACACCCACAGAACCAAAA+CGG | 0.569611 | 4.2:-35771292 | None:intergenic |
TTGATTAGGTCACACTATGT+AGG | 0.570960 | 4.2:+35771926 | MS.gene062935:CDS |
GGAGGTTTGTGTTGAAGAAG+CGG | 0.572584 | 4.2:-35770848 | None:intergenic |
CCTTCAAGCACAGCACGGAC+CGG | 0.573470 | 4.2:-35772010 | None:intergenic |
TGTGAAGTTGAAGCTTTCAC+CGG | 0.573769 | 4.2:+35771991 | MS.gene062935:CDS |
AAGAGAGCTCAAGGTTAAGA+GGG | 0.575571 | 4.2:+35772354 | MS.gene062935:CDS |
TTGTTGATGATTCAATTGTG+AGG | 0.577918 | 4.2:+35772047 | MS.gene062935:CDS |
AACGTTCTTCAATCCATCAC+CGG | 0.584401 | 4.2:+35771134 | MS.gene062935:CDS |
TGTTGATGATTCAATTGTGA+GGG | 0.586634 | 4.2:+35772048 | MS.gene062935:CDS |
TGAAGCTACTTATGAGAGGG+AGG | 0.587839 | 4.2:+35771622 | MS.gene062935:CDS |
TACGGGTGTCGGAGAGAGAA+GGG | 0.589095 | 4.2:-35770884 | None:intergenic |
TGATTGAAGCTACTTATGAG+AGG | 0.590354 | 4.2:+35771618 | MS.gene062935:CDS |
GTTATGGGGAGGAGAAGTAA+TGG | 0.595209 | 4.2:+35771557 | MS.gene062935:CDS |
TGTTGAACCAAGAGAGCTCA+AGG | 0.596313 | 4.2:+35772345 | MS.gene062935:CDS |
AAACATCCTCGTCTTGTGGG+TGG | 0.606526 | 4.2:-35770968 | None:intergenic |
ATCGGAGACAAGACCAACAC+CGG | 0.609069 | 4.2:-35771153 | None:intergenic |
CGCGGTGTTGGAGAGCGTGG+AGG | 0.613758 | 4.2:-35771076 | None:intergenic |
CAGCAGTAGAATAACGAACA+TGG | 0.626295 | 4.2:-35771226 | None:intergenic |
AGGATAAGCTTGTTGCTGTG+AGG | 0.627037 | 4.2:+35771510 | MS.gene062935:CDS |
CAACATCGTCGAAGATTGTG+AGG | 0.634583 | 4.2:+35772074 | MS.gene062935:CDS |
TCTGTGGGTGTTGCTCATAA+CGG | 0.634744 | 4.2:+35771302 | MS.gene062935:CDS |
AGAAGAGAGAGTTTGAGCTG+CGG | 0.634768 | 4.2:-35770787 | None:intergenic |
CTTCTCCTCCCCATAACCAA+AGG | 0.635089 | 4.2:-35771551 | None:intergenic |
AAGTCCCTAATCTTCTGAGA+CGG | 0.638630 | 4.2:-35771965 | None:intergenic |
ATCACGTAGGCGATTTGGTG+AGG | 0.640246 | 4.2:+35771790 | MS.gene062935:CDS |
TTAGGTCACACTATGTAGGA+AGG | 0.643224 | 4.2:+35771930 | MS.gene062935:CDS |
TGAGCTCTCTTGGTTCAACA+GGG | 0.647432 | 4.2:-35772342 | None:intergenic |
AGTTTGGAACAAATTGATGG+TGG | 0.649376 | 4.2:+35772409 | MS.gene062935:CDS |
ACAACTCCGCACTCTTCACG+AGG | 0.650501 | 4.2:-35771008 | None:intergenic |
TTACCCGGAAGCTTAGCCAT+CGG | 0.652209 | 4.2:+35771203 | MS.gene062935:CDS |
GACAAGCCTCGTGAAGAGTG+CGG | 0.664911 | 4.2:+35771002 | MS.gene062935:CDS |
AGAATAACGAACATGGCCGA+TGG | 0.666671 | 4.2:-35771219 | None:intergenic |
GTGCAAAAGAAGTTCACATG+AGG | 0.670165 | 4.2:+35772113 | MS.gene062935:CDS |
GTTGATGATTCAATTGTGAG+GGG | 0.670311 | 4.2:+35772049 | MS.gene062935:CDS |
GGCTAAGTAGCAGAGACGGG+AGG | 0.683072 | 4.2:-35771054 | None:intergenic |
TGTGGATACACCTAGCTCAG+AGG | 0.694828 | 4.2:+35772174 | MS.gene062935:CDS |
GGTCTGTGTATGAATCACGT+AGG | 0.739465 | 4.2:+35771777 | MS.gene062935:CDS |
CAACCACAATCACCTCACCA+GGG | 0.745503 | 4.2:-35771649 | None:intergenic |
CTCCACGCTCTCCAACACCG+CGG | 0.815634 | 4.2:+35771077 | MS.gene062935:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACAAGCATAACAAAAATT+AGG | - | chr4.2:35772310-35772329 | None:intergenic | 20.0% |
!! | TCAACAATTCTCAAAATAAA+AGG | - | chr4.2:35771443-35771462 | None:intergenic | 20.0% |
! | TAGTAACAAGAACCAATAAT+TGG | - | chr4.2:35772151-35772170 | None:intergenic | 25.0% |
!! | GAAGAAATAAGGGATTTTAT+TGG | + | chr4.2:35772223-35772242 | MS.gene062935:CDS | 25.0% |
!!! | ATTATTGGTTCTTGTTACTA+TGG | + | chr4.2:35772151-35772170 | MS.gene062935:CDS | 25.0% |
!!! | TGATTGTGGTTGATAATAAT+GGG | + | chr4.2:35771660-35771679 | MS.gene062935:CDS | 25.0% |
!!! | TTTTGTTTCGTTGAATACAT+CGG | - | chr4.2:35771174-35771193 | None:intergenic | 25.0% |
ATACTATGCAAGCTATTGAT+TGG | - | chr4.2:35772271-35772290 | None:intergenic | 30.0% | |
CTACCAAAAACAACAGAATT+AGG | - | chr4.2:35771758-35771777 | None:intergenic | 30.0% | |
TAACAAGAACCAATAATTGG+TGG | - | chr4.2:35772148-35772167 | None:intergenic | 30.0% | |
! | AATAGCTTGCATAGTATGTT+GGG | + | chr4.2:35772274-35772293 | MS.gene062935:CDS | 30.0% |
! | TTGAAGAACGTTGTTGTTAA+CGG | - | chr4.2:35771126-35771145 | None:intergenic | 30.0% |
! | TTTGTTATGCTTGTTTCTCT+GGG | + | chr4.2:35772314-35772333 | MS.gene062935:CDS | 30.0% |
!! | GATGAGTGTTGAAGAAATAA+GGG | + | chr4.2:35772213-35772232 | MS.gene062935:CDS | 30.0% |
!! | GTGATTGTGGTTGATAATAA+TGG | + | chr4.2:35771659-35771678 | MS.gene062935:CDS | 30.0% |
!! | TGTTGATGATTCAATTGTGA+GGG | + | chr4.2:35772048-35772067 | MS.gene062935:CDS | 30.0% |
!! | TTGTTGATGATGGTTTGAAT+GGG | + | chr4.2:35772386-35772405 | MS.gene062935:CDS | 30.0% |
!! | TTGTTGATGATTCAATTGTG+AGG | + | chr4.2:35772047-35772066 | MS.gene062935:CDS | 30.0% |
!! | TTTGTTGATGATGGTTTGAA+TGG | + | chr4.2:35772385-35772404 | MS.gene062935:CDS | 30.0% |
!! | TTTTGTTATGCTTGTTTCTC+TGG | + | chr4.2:35772313-35772332 | MS.gene062935:CDS | 30.0% |
!!! | CTAATTCTGTTGTTTTTGGT+AGG | + | chr4.2:35771756-35771775 | MS.gene062935:CDS | 30.0% |
!!! | TTGCCTAATTCTGTTGTTTT+TGG | + | chr4.2:35771752-35771771 | MS.gene062935:CDS | 30.0% |
AGAGCTAAGCTTGAAGATAA+AGG | + | chr4.2:35771350-35771369 | MS.gene062935:CDS | 35.0% | |
ATCACAACATCACAATCAAC+AGG | - | chr4.2:35771833-35771852 | None:intergenic | 35.0% | |
ATTGCAAGTCCACCAATTAT+TGG | + | chr4.2:35772136-35772155 | MS.gene062935:CDS | 35.0% | |
CTAATCAACCCTTGTTGAAA+AGG | - | chr4.2:35771914-35771933 | None:intergenic | 35.0% | |
GATTGAAGCTACTTATGAGA+GGG | + | chr4.2:35771619-35771638 | MS.gene062935:CDS | 35.0% | |
TGATTGAAGCTACTTATGAG+AGG | + | chr4.2:35771618-35771637 | MS.gene062935:CDS | 35.0% | |
TGGAAGAAAAGCAAGTGAAT+CGG | - | chr4.2:35772251-35772270 | None:intergenic | 35.0% | |
TTGATTAGGTCACACTATGT+AGG | + | chr4.2:35771926-35771945 | MS.gene062935:CDS | 35.0% | |
! | AATGTTCAACCTTTTGTTGC+TGG | + | chr4.2:35771266-35771285 | MS.gene062935:CDS | 35.0% |
! | AGTTTGGAACAAATTGATGG+TGG | + | chr4.2:35772409-35772428 | MS.gene062935:CDS | 35.0% |
! | ATGTTCAACCTTTTGTTGCT+GGG | + | chr4.2:35771267-35771286 | MS.gene062935:CDS | 35.0% |
! | CAATAGCTTGCATAGTATGT+TGG | + | chr4.2:35772273-35772292 | MS.gene062935:CDS | 35.0% |
! | TTCTATTGTGTTTGTTACCG+AGG | + | chr4.2:35771490-35771509 | MS.gene062935:CDS | 35.0% |
!! | CAGAGGAGTTGATATCTAAT+AGG | + | chr4.2:35772191-35772210 | MS.gene062935:CDS | 35.0% |
!! | CTTTTCAACAAGGGTTGATT+AGG | + | chr4.2:35771912-35771931 | MS.gene062935:CDS | 35.0% |
!! | GGATGAGTGTTGAAGAAATA+AGG | + | chr4.2:35772212-35772231 | MS.gene062935:CDS | 35.0% |
!! | GTTGATGATTCAATTGTGAG+GGG | + | chr4.2:35772049-35772068 | MS.gene062935:CDS | 35.0% |
AAAGAGGTGAATACTGCTAC+TGG | + | chr4.2:35772457-35772476 | MS.gene062935:CDS | 40.0% | |
AACGTTCTTCAATCCATCAC+CGG | + | chr4.2:35771134-35771153 | MS.gene062935:CDS | 40.0% | |
AAGAGAGCTCAAGGTTAAGA+GGG | + | chr4.2:35772354-35772373 | MS.gene062935:CDS | 40.0% | |
AAGTGAGGAAAAGGGGTTTA+CGG | - | chr4.2:35770905-35770924 | None:intergenic | 40.0% | |
ACAAAACTCGATCAGTTACC+CGG | + | chr4.2:35771188-35771207 | MS.gene062935:CDS | 40.0% | |
AGAGGATGATGTCGGAAATT+GGG | - | chr4.2:35770938-35770957 | None:intergenic | 40.0% | |
AGCCAACAGAAATCCAAAAG+AGG | + | chr4.2:35772441-35772460 | MS.gene062935:CDS | 40.0% | |
CAGCAGTAGAATAACGAACA+TGG | - | chr4.2:35771229-35771248 | None:intergenic | 40.0% | |
CATGTTCGTTATTCTACTGC+TGG | + | chr4.2:35771227-35771246 | MS.gene062935:CDS | 40.0% | |
GAAGATTGTGAGGTTGCTTA+AGG | + | chr4.2:35772084-35772103 | MS.gene062935:CDS | 40.0% | |
GATTCAATCGCTCTGTTTGA+TGG | + | chr4.2:35771682-35771701 | MS.gene062935:CDS | 40.0% | |
GTGCAAAAGAAGTTCACATG+AGG | + | chr4.2:35772113-35772132 | MS.gene062935:CDS | 40.0% | |
TATGAATCACGTAGGCGATT+TGG | + | chr4.2:35771785-35771804 | MS.gene062935:CDS | 40.0% | |
TCTCAGAAGATTAGGGACTT+TGG | + | chr4.2:35771968-35771987 | MS.gene062935:CDS | 40.0% | |
TGATGGTTTGAATGGGAGTT+TGG | + | chr4.2:35772393-35772412 | MS.gene062935:CDS | 40.0% | |
TGCTCAAAGATACACTGCTT+CGG | - | chr4.2:35771719-35771738 | None:intergenic | 40.0% | |
TGCTGTGCTTGAAGGTAAAA+GGG | + | chr4.2:35772018-35772037 | MS.gene062935:CDS | 40.0% | |
TGGTTCTTGTTACTATGGTG+TGG | + | chr4.2:35772156-35772175 | MS.gene062935:CDS | 40.0% | |
TGTGAAGTTGAAGCTTTCAC+CGG | + | chr4.2:35771991-35772010 | MS.gene062935:CDS | 40.0% | |
TTAGGTCACACTATGTAGGA+AGG | + | chr4.2:35771930-35771949 | MS.gene062935:CDS | 40.0% | |
TTTGGAGGAAGTGAGGAAAA+GGG | - | chr4.2:35770913-35770932 | None:intergenic | 40.0% | |
TTTGTTGGAGAGGATGATGT+CGG | - | chr4.2:35770946-35770965 | None:intergenic | 40.0% | |
! | AAGTCCCTAATCTTCTGAGA+CGG | - | chr4.2:35771968-35771987 | None:intergenic | 40.0% |
! | CACCTCTTTTGGATTTCTGT+TGG | - | chr4.2:35772446-35772465 | None:intergenic | 40.0% |
! | GATGTCGGAAATTGGGTTTT+TGG | - | chr4.2:35770931-35770950 | None:intergenic | 40.0% |
! | GGGAGTTTGGAACAAATTGA+TGG | + | chr4.2:35772406-35772425 | MS.gene062935:CDS | 40.0% |
! | GTAGCAGTATTCACCTCTTT+TGG | - | chr4.2:35772457-35772476 | None:intergenic | 40.0% |
! | TTGAAGAAGCGGTTGTTGTT+GGG | - | chr4.2:35770840-35770859 | None:intergenic | 40.0% |
! | TTTTACCTTCAAGCACAGCA+CGG | - | chr4.2:35772018-35772037 | None:intergenic | 40.0% |
!! | GGAACAAATTGATGGTGGTT+GGG | + | chr4.2:35772414-35772433 | MS.gene062935:CDS | 40.0% |
!! | GTTGGTGACTTTGTTGATGA+TGG | + | chr4.2:35772376-35772395 | MS.gene062935:CDS | 40.0% |
!! | TGGAACAAATTGATGGTGGT+TGG | + | chr4.2:35772413-35772432 | MS.gene062935:CDS | 40.0% |
!! | TTTTGGAGGAAGTGAGGAAA+AGG | - | chr4.2:35770914-35770933 | None:intergenic | 40.0% |
AAACGGTACCCAGCAACAAA+AGG | - | chr4.2:35771278-35771297 | None:intergenic | 45.0% | |
ACCAAAGGCCTAAACCCAAA+CGG | - | chr4.2:35771539-35771558 | None:intergenic | 45.0% | |
AGAAGAGAGAGTTTGAGCTG+CGG | - | chr4.2:35770790-35770809 | None:intergenic | 45.0% | |
AGAATAACGAACATGGCCGA+TGG | - | chr4.2:35771222-35771241 | None:intergenic | 45.0% | |
AGGAAAACATCCTCGTCTTG+TGG | - | chr4.2:35770975-35770994 | None:intergenic | 45.0% | |
AGTGAGGAAAAGGGGTTTAC+GGG | - | chr4.2:35770904-35770923 | None:intergenic | 45.0% | |
CAACACCCACAGAACCAAAA+CGG | - | chr4.2:35771295-35771314 | None:intergenic | 45.0% | |
CAACATCGTCGAAGATTGTG+AGG | + | chr4.2:35772074-35772093 | MS.gene062935:CDS | 45.0% | |
CAAGAGAGCTCAAGGTTAAG+AGG | + | chr4.2:35772353-35772372 | MS.gene062935:CDS | 45.0% | |
CACAGCAACAAGCTTATCCT+CGG | - | chr4.2:35771510-35771529 | None:intergenic | 45.0% | |
CCCTTGTTGAAAAGGAACAC+CGG | - | chr4.2:35771906-35771925 | None:intergenic | 45.0% | |
CTCTTAACCTTGAGCTCTCT+TGG | - | chr4.2:35772355-35772374 | None:intergenic | 45.0% | |
GAGAGGATGATGTCGGAAAT+TGG | - | chr4.2:35770939-35770958 | None:intergenic | 45.0% | |
GATATCAACTCCTCTGAGCT+AGG | - | chr4.2:35772187-35772206 | None:intergenic | 45.0% | |
GATGCATGTGAGAAGCTTGA+AGG | + | chr4.2:35771461-35771480 | MS.gene062935:CDS | 45.0% | |
GGAAAACATCCTCGTCTTGT+GGG | - | chr4.2:35770974-35770993 | None:intergenic | 45.0% | |
GGAGGTTTGTGTTGAAGAAG+CGG | - | chr4.2:35770851-35770870 | None:intergenic | 45.0% | |
GGGTTTAGGCCTTTGGTTAT+GGG | + | chr4.2:35771542-35771561 | MS.gene062935:CDS | 45.0% | |
GGTCTGTGTATGAATCACGT+AGG | + | chr4.2:35771777-35771796 | MS.gene062935:CDS | 45.0% | |
GGTTTAGGCCTTTGGTTATG+GGG | + | chr4.2:35771543-35771562 | MS.gene062935:CDS | 45.0% | |
GTGATAGCTGTTCCTGATTC+TGG | + | chr4.2:35771848-35771867 | MS.gene062935:CDS | 45.0% | |
GTGCTGTGCTTGAAGGTAAA+AGG | + | chr4.2:35772017-35772036 | MS.gene062935:CDS | 45.0% | |
GTTATGGGGAGGAGAAGTAA+TGG | + | chr4.2:35771557-35771576 | MS.gene062935:CDS | 45.0% | |
GTTGAAGAAGCGGTTGTTGT+TGG | - | chr4.2:35770841-35770860 | None:intergenic | 45.0% | |
TGAAGCTACTTATGAGAGGG+AGG | + | chr4.2:35771622-35771641 | MS.gene062935:CDS | 45.0% | |
TGAGCCGTCTCAGAAGATTA+GGG | + | chr4.2:35771961-35771980 | MS.gene062935:CDS | 45.0% | |
TGAGCTCTCTTGGTTCAACA+GGG | - | chr4.2:35772345-35772364 | None:intergenic | 45.0% | |
TGCGGAGTTGTTGGAATCTA+TGG | + | chr4.2:35771020-35771039 | MS.gene062935:CDS | 45.0% | |
TGGGTTTAGGCCTTTGGTTA+TGG | + | chr4.2:35771541-35771560 | MS.gene062935:CDS | 45.0% | |
TGTTGAACCAAGAGAGCTCA+AGG | + | chr4.2:35772345-35772364 | MS.gene062935:CDS | 45.0% | |
TTGAGCCGTCTCAGAAGATT+AGG | + | chr4.2:35771960-35771979 | MS.gene062935:CDS | 45.0% | |
TTGAGCTCTCTTGGTTCAAC+AGG | - | chr4.2:35772346-35772365 | None:intergenic | 45.0% | |
TTGGAGGAAGTGAGGAAAAG+GGG | - | chr4.2:35770912-35770931 | None:intergenic | 45.0% | |
! | CCGGTGTTCCTTTTCAACAA+GGG | + | chr4.2:35771903-35771922 | MS.gene062935:CDS | 45.0% |
! | GTCTTGTGGGTGGTTTTTGT+TGG | - | chr4.2:35770961-35770980 | None:intergenic | 45.0% |
! | TGTTCCTGATTCTGGTGTTG+TGG | + | chr4.2:35771856-35771875 | MS.gene062935:CDS | 45.0% |
!! | AGGATAAGCTTGTTGCTGTG+AGG | + | chr4.2:35771510-35771529 | MS.gene062935:CDS | 45.0% |
!! | GAGAAGGGATGGTTTGGTTA+GGG | - | chr4.2:35770814-35770833 | None:intergenic | 45.0% |
!! | GGATAAGCTTGTTGCTGTGA+GGG | + | chr4.2:35771511-35771530 | MS.gene062935:CDS | 45.0% |
!! | GTCGGAAATTGGGTTTTTGG+AGG | - | chr4.2:35770928-35770947 | None:intergenic | 45.0% |
!! | TCTGTGGGTGTTGCTCATAA+CGG | + | chr4.2:35771302-35771321 | MS.gene062935:CDS | 45.0% |
!! | TTGGGTTTTTGGAGGAAGTG+AGG | - | chr4.2:35770920-35770939 | None:intergenic | 45.0% |
!! | TTTGTTGCTGGGTACCGTTT+TGG | + | chr4.2:35771278-35771297 | MS.gene062935:CDS | 45.0% |
AAACATCCTCGTCTTGTGGG+TGG | - | chr4.2:35770971-35770990 | None:intergenic | 50.0% | |
AAGATACACTGCTTCGGCTG+CGG | - | chr4.2:35771713-35771732 | None:intergenic | 50.0% | |
ATCGGAGACAAGACCAACAC+CGG | - | chr4.2:35771156-35771175 | None:intergenic | 50.0% | |
CAAAAACCACCCACAAGACG+AGG | + | chr4.2:35770962-35770981 | MS.gene062935:CDS | 50.0% | |
CAACCACAATCACCTCACCA+GGG | - | chr4.2:35771652-35771671 | None:intergenic | 50.0% | |
CTTCAATCCATCACCGGTGT+TGG | + | chr4.2:35771140-35771159 | MS.gene062935:CDS | 50.0% | |
CTTCTCCTCCCCATAACCAA+AGG | - | chr4.2:35771554-35771573 | None:intergenic | 50.0% | |
CTTGGTTATGCTGCGAAAGC+CGG | + | chr4.2:35771884-35771903 | MS.gene062935:CDS | 50.0% | |
GAAAAGGGGTTTACGGGTGT+CGG | - | chr4.2:35770898-35770917 | None:intergenic | 50.0% | |
GAGCTCAAGGTTAAGAGGGT+TGG | + | chr4.2:35772358-35772377 | MS.gene062935:CDS | 50.0% | |
GTGAGGTTGCTTAAGGAAGC+TGG | + | chr4.2:35772091-35772110 | MS.gene062935:CDS | 50.0% | |
GTTGTTAACGGTGACGATCC+CGG | - | chr4.2:35771114-35771133 | None:intergenic | 50.0% | |
TCAACCACAATCACCTCACC+AGG | - | chr4.2:35771653-35771672 | None:intergenic | 50.0% | |
TGTGGATACACCTAGCTCAG+AGG | + | chr4.2:35772174-35772193 | MS.gene062935:CDS | 50.0% | |
TTACCCGGAAGCTTAGCCAT+CGG | + | chr4.2:35771203-35771222 | MS.gene062935:CDS | 50.0% | |
TTAGGCCTTTGGTTATGGGG+AGG | + | chr4.2:35771546-35771565 | MS.gene062935:CDS | 50.0% | |
TTGCTGTGAGGGATCCGTTT+GGG | + | chr4.2:35771522-35771541 | MS.gene062935:CDS | 50.0% | |
TTTCCCTGGTGAGGTGATTG+TGG | + | chr4.2:35771646-35771665 | MS.gene062935:CDS | 50.0% | |
! | AAGAAGCGGTTGTTGTTGGG+AGG | - | chr4.2:35770837-35770856 | None:intergenic | 50.0% |
! | AGAAGCGGTTGTTGTTGGGA+GGG | - | chr4.2:35770836-35770855 | None:intergenic | 50.0% |
! | AGAGAAGGGAGAGAGGGTTT+TGG | - | chr4.2:35770873-35770892 | None:intergenic | 50.0% |
! | GAGAAGGGAGAGAGGGTTTT+GGG | - | chr4.2:35770872-35770891 | None:intergenic | 50.0% |
! | GCCGGTGTTCCTTTTCAACA+AGG | + | chr4.2:35771902-35771921 | MS.gene062935:CDS | 50.0% |
! | GTGGGTGGTTTTTGTTGGAG+AGG | - | chr4.2:35770956-35770975 | None:intergenic | 50.0% |
! | GTTGTTGTTGGGAGGGAGAA+GGG | - | chr4.2:35770829-35770848 | None:intergenic | 50.0% |
! | TATGAGAGGGAGGTTTTCCC+TGG | + | chr4.2:35771632-35771651 | MS.gene062935:CDS | 50.0% |
! | TCCGTTTGGGTTTAGGCCTT+TGG | + | chr4.2:35771535-35771554 | MS.gene062935:CDS | 50.0% |
! | TGAGGGATCCGTTTGGGTTT+AGG | + | chr4.2:35771528-35771547 | MS.gene062935:CDS | 50.0% |
!! | ATCACGTAGGCGATTTGGTG+AGG | + | chr4.2:35771790-35771809 | MS.gene062935:CDS | 50.0% |
!! | GGAGAAGGGATGGTTTGGTT+AGG | - | chr4.2:35770815-35770834 | None:intergenic | 50.0% |
!!! | GGGTACCGTTTTGGTTCTGT+GGG | + | chr4.2:35771287-35771306 | MS.gene062935:CDS | 50.0% |
!!! | TGGGTACCGTTTTGGTTCTG+TGG | + | chr4.2:35771286-35771305 | MS.gene062935:CDS | 50.0% |
ACAACTCCGCACTCTTCACG+AGG | - | chr4.2:35771011-35771030 | None:intergenic | 55.0% | |
ATGGCCGATGGCTAAGCTTC+CGG | - | chr4.2:35771210-35771229 | None:intergenic | 55.0% | |
GACAAGACCAACACCGGTGA+TGG | - | chr4.2:35771150-35771169 | None:intergenic | 55.0% | |
GACAAGCCTCGTGAAGAGTG+CGG | + | chr4.2:35771002-35771021 | MS.gene062935:CDS | 55.0% | |
GAGGGCTAAGTAGCAGAGAC+GGG | - | chr4.2:35771060-35771079 | None:intergenic | 55.0% | |
GCAGCCACAACACCAGAATC+AGG | - | chr4.2:35771863-35771882 | None:intergenic | 55.0% | |
GGAGGGCTAAGTAGCAGAGA+CGG | - | chr4.2:35771061-35771080 | None:intergenic | 55.0% | |
GTTGCTGTGAGGGATCCGTT+TGG | + | chr4.2:35771521-35771540 | MS.gene062935:CDS | 55.0% | |
TCGGAGAGAGAAGGGAGAGA+GGG | - | chr4.2:35770879-35770898 | None:intergenic | 55.0% | |
TTGTTGGGAGGGAGAAGGGA+TGG | - | chr4.2:35770825-35770844 | None:intergenic | 55.0% | |
! | CGTGAAGAGTGCGGAGTTGT+TGG | + | chr4.2:35771011-35771030 | MS.gene062935:CDS | 55.0% |
! | GGTTGTTGTTGGGAGGGAGA+AGG | - | chr4.2:35770830-35770849 | None:intergenic | 55.0% |
!! | TACGGGTGTCGGAGAGAGAA+GGG | - | chr4.2:35770887-35770906 | None:intergenic | 55.0% |
!! | TTACGGGTGTCGGAGAGAGA+AGG | - | chr4.2:35770888-35770907 | None:intergenic | 55.0% |
!!! | AAGGGAGAGAGGGTTTTGGG+AGG | - | chr4.2:35770869-35770888 | None:intergenic | 55.0% |
CACGAGGCTTGTCGTCGTTG+AGG | - | chr4.2:35770995-35771014 | None:intergenic | 60.0% | |
CCTTCAAGCACAGCACGGAC+CGG | - | chr4.2:35772013-35772032 | None:intergenic | 60.0% | |
GGCTAAGTAGCAGAGACGGG+AGG | - | chr4.2:35771057-35771076 | None:intergenic | 60.0% | |
GGGAGGGAGAAGGGATGGTT+TGG | - | chr4.2:35770820-35770839 | None:intergenic | 60.0% | |
GTCGGAGAGAGAAGGGAGAG+AGG | - | chr4.2:35770880-35770899 | None:intergenic | 60.0% | |
TGGCCGATGGCTAAGCTTCC+GGG | - | chr4.2:35771209-35771228 | None:intergenic | 60.0% | |
! | GAGGGAGGTTTTCCCTGGTG+AGG | + | chr4.2:35771637-35771656 | MS.gene062935:CDS | 60.0% |
!! | TCTGGTGTTGTGGCTGCGCT+TGG | + | chr4.2:35771866-35771885 | MS.gene062935:CDS | 60.0% |
CCGGTCCGTGCTGTGCTTGA+AGG | + | chr4.2:35772010-35772029 | MS.gene062935:CDS | 65.0% | |
CTCCAACACCGCGGCCAAGA+AGG | + | chr4.2:35771086-35771105 | MS.gene062935:CDS | 65.0% | |
CTCCACGCTCTCCAACACCG+CGG | + | chr4.2:35771077-35771096 | MS.gene062935:CDS | 65.0% | |
TGACGATCCCGGCGCCTTCT+TGG | - | chr4.2:35771103-35771122 | None:intergenic | 65.0% | |
! | GCGGTGTTGGAGAGCGTGGA+GGG | - | chr4.2:35771078-35771097 | None:intergenic | 65.0% |
CGCCTTCTTGGCCGCGGTGT+TGG | - | chr4.2:35771091-35771110 | None:intergenic | 70.0% | |
! | CGCGGTGTTGGAGAGCGTGG+AGG | - | chr4.2:35771079-35771098 | None:intergenic | 70.0% |
TCCCGGCGCCTTCTTGGCCG+CGG | - | chr4.2:35771097-35771116 | None:intergenic | 75.0% | |
! | CACCGCGGCCAAGAAGGCGC+CGG | + | chr4.2:35771092-35771111 | MS.gene062935:CDS | 75.0% |
! | GGCCGCGGTGTTGGAGAGCG+TGG | - | chr4.2:35771082-35771101 | None:intergenic | 75.0% |
!! | ACCGCGGCCAAGAAGGCGCC+GGG | + | chr4.2:35771093-35771112 | MS.gene062935:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 35770783 | 35772486 | 35770783 | ID=MS.gene062935 |
chr4.2 | mRNA | 35770783 | 35772486 | 35770783 | ID=MS.gene062935.t1;Parent=MS.gene062935 |
chr4.2 | exon | 35770783 | 35772486 | 35770783 | ID=MS.gene062935.t1.exon1;Parent=MS.gene062935.t1 |
chr4.2 | CDS | 35770783 | 35772486 | 35770783 | ID=cds.MS.gene062935.t1;Parent=MS.gene062935.t1 |
Gene Sequence |
Protein sequence |