AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063054

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063054.t1 MTR_4g127770 94.424 556 24 2 595 1148 534 1084 0.0 1084
MS.gene063054.t1 MTR_4g127770 81.395 559 93 5 14 568 535 1086 0.0 916
MS.gene063054.t1 MTR_4g127770 89.545 440 43 1 68 507 102 538 0.0 801
MS.gene063054.t1 MTR_4g127770 81.050 438 78 2 648 1085 102 534 0.0 711
MS.gene063054.t1 MTR_4g127770 67.442 86 24 2 1003 1085 3 87 1.35e-24 112
MS.gene063054.t1 MTR_4g127770 63.218 87 26 2 421 503 3 87 2.68e-24 110
MS.gene063054.t1 MTR_2g036600 80.935 556 101 2 594 1148 46 597 0.0 944
MS.gene063054.t1 MTR_2g036600 77.982 545 112 2 25 566 58 597 0.0 882
MS.gene063054.t1 MTR_2g036600 84.234 444 66 1 705 1148 17 456 0.0 788
MS.gene063054.t1 MTR_2g036600 81.532 444 77 1 123 566 18 456 0.0 754
MS.gene063054.t1 MTR_4g127790 83.291 395 64 1 756 1148 1 395 0.0 691
MS.gene063054.t1 MTR_4g127790 82.895 380 65 0 189 568 18 397 0.0 671
MS.gene063054.t1 MTR_8g007295 36.625 557 288 10 615 1144 59 577 2.40e-103 338
MS.gene063054.t1 MTR_8g007295 35.484 558 291 12 35 562 59 577 4.19e-98 324
MS.gene063054.t1 MTR_8g007295 34.091 440 243 8 615 1045 59 460 4.87e-69 239
MS.gene063054.t1 MTR_8g007295 33.333 441 243 10 35 463 59 460 1.32e-66 233
MS.gene063054.t1 MTR_1g014140 23.770 488 321 13 662 1139 87 533 3.33e-24 108
MS.gene063054.t1 MTR_2g061670 59.756 82 31 1 470 551 32 111 1.44e-22 95.1
MS.gene063054.t1 MTR_2g061670 63.380 71 24 1 1063 1133 43 111 3.16e-21 91.7
MS.gene063054.t1 MTR_2g021780 39.167 120 62 2 608 726 35 144 7.02e-14 70.9
MS.gene063054.t1 MTR_4g052070 28.667 150 97 4 209 352 182 327 5.19e-13 73.9
MS.gene063054.t1 MTR_4g052070 29.333 150 96 4 791 934 182 327 1.50e-12 72.4
MS.gene063054.t1 MTR_8g104740 27.083 144 103 2 792 934 197 339 1.09e-12 72.8
MS.gene063054.t1 MTR_8g104740 27.211 147 99 3 210 352 197 339 1.12e-12 72.8
MS.gene063054.t1 MTR_8g104740 27.211 147 99 3 210 352 197 339 1.23e-12 72.4
MS.gene063054.t1 MTR_8g104740 27.083 144 103 2 792 934 197 339 1.28e-12 72.4
MS.gene063054.t1 MTR_4g120810 26.389 144 104 2 792 934 195 337 2.56e-12 71.6
MS.gene063054.t1 MTR_4g120810 26.531 147 100 3 210 352 195 337 2.74e-12 71.6
MS.gene063054.t1 MTR_4g120810 26.531 147 100 3 210 352 195 337 3.28e-12 71.2
MS.gene063054.t1 MTR_4g120810 26.389 144 104 2 792 934 195 337 3.57e-12 71.2
MS.gene063054.t1 MTR_1g113700 27.891 147 98 3 210 352 152 294 2.87e-11 68.2
MS.gene063054.t1 MTR_1g113700 27.083 144 103 2 792 934 152 294 6.39e-11 67.0
MS.gene063054.t1 MTR_8g104740 25.833 120 88 1 234 352 8 127 8.31e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063054.t1 AT3G11710 76.164 537 121 3 608 1143 79 609 0.0 870
MS.gene063054.t1 AT3G11710 69.231 572 159 6 15 579 63 624 0.0 828
MS.gene063054.t1 AT3G13490 35.893 560 291 10 615 1144 80 601 1.41e-100 331
MS.gene063054.t1 AT3G13490 34.698 562 293 13 35 562 80 601 1.55e-92 309
MS.gene063054.t1 AT3G30805 81.132 53 10 0 1086 1138 71 123 1.57e-23 99.0
MS.gene063054.t1 AT3G30805 75.472 53 13 0 504 556 71 123 8.03e-21 91.3
MS.gene063054.t1 AT4G26870 24.346 497 316 17 661 1139 70 524 6.40e-21 98.6
MS.gene063054.t1 AT4G31180 24.544 493 312 20 662 1139 103 550 5.33e-17 86.3
MS.gene063054.t1 AT4G31180 23.887 494 312 23 82 557 103 550 1.25e-13 75.5
MS.gene063054.t1 AT4G31180 24.544 493 312 20 662 1139 103 550 5.33e-17 86.3
MS.gene063054.t1 AT4G31180 23.887 494 312 23 82 557 103 550 1.25e-13 75.5
MS.gene063054.t1 AT4G33760 29.032 155 108 2 781 934 52 205 5.39e-14 76.6
MS.gene063054.t1 AT4G33760 27.211 147 105 2 207 352 60 205 1.35e-11 68.9
MS.gene063054.t1 AT4G33760 29.032 155 108 2 781 934 188 341 6.56e-14 77.0
MS.gene063054.t1 AT4G33760 27.211 147 105 2 207 352 196 341 1.31e-11 69.3

Find 273 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCATCAAATTTGCATTAT+TGG 0.111871 8.3:-3364166 None:intergenic
CACCGTCAAATTTGCATTAT+TGG 0.124349 8.3:-3358483 None:intergenic
TCCTTCAAAATGTATGTTTC+AGG 0.181765 8.3:-3358620 None:intergenic
CCTTGCTGGCCTTCATTTCA+TGG 0.201842 8.3:+3365699 MS.gene063054:CDS
CCAACTGGTGGTTGGGGTTT+GGG 0.204870 8.3:+3367475 MS.gene063054:CDS
CCAACTGGTGGTTGGGGTTT+GGG 0.227071 8.3:+3361458 MS.gene063054:CDS
GCCAACTGGTGGTTGGGGTT+TGG 0.232514 8.3:+3367474 MS.gene063054:CDS
ATGGAACGTGTTTATGAAAT+TGG 0.241321 8.3:+3365945 MS.gene063054:CDS
GCCAACTGGTGGTTGGGGTT+TGG 0.250654 8.3:+3361457 MS.gene063054:CDS
ATGGAACGTGTTTATGAAAT+TGG 0.254852 8.3:+3359652 MS.gene063054:CDS
GACTTGAATGAGGTTGAATT+TGG 0.268675 8.3:+3363669 MS.gene063054:CDS
TCAGGGCTTCTGGTACTTCC+TGG 0.271401 8.3:-3364288 None:intergenic
TGAAGATGTGTCTATTTCTT+TGG 0.281075 8.3:+3362533 MS.gene063054:CDS
TACATTACTGCTCTGGAGTA+TGG 0.281721 8.3:+3361428 MS.gene063054:CDS
GTTGGTGTCACTGGATTTCC+AGG 0.293901 8.3:+3363726 MS.gene063054:CDS
GTTGGTGTCATTGGATTTCC+AGG 0.297597 8.3:+3357988 MS.gene063054:CDS
TCAGGATTCCTGGTACTTCC+TGG 0.304810 8.3:-3358602 None:intergenic
TGAAGACGTGTCTGTGTCTT+TGG 0.305307 8.3:+3357506 MS.gene063054:CDS
AAGATATCGTTTACGCCATT+TGG 0.308132 8.3:+3359310 MS.gene063054:CDS
TCGGCAGTTGCCGGAGGTTT+AGG 0.314354 8.3:-3356965 None:intergenic
TTTGCCGCCAACTGGTGGTT+GGG 0.328330 8.3:+3361451 MS.gene063054:CDS
TTTGCCGCCAACTGGTGGTT+GGG 0.328330 8.3:+3367468 MS.gene063054:CDS
AAGAGTCTTTGTTCATAATT+CGG 0.338397 8.3:-3357636 None:intergenic
GTTCAATACATTGATAGATA+TGG 0.347688 8.3:+3362486 MS.gene063054:CDS
TGCCTTCAAGGTCCAGGTTA+TGG 0.349562 8.3:+3362724 MS.gene063054:CDS
TGGCAGCAGCAGCAGACTTT+TGG 0.352886 8.3:-3364146 None:intergenic
CTATCAATGTATTGAACAAT+AGG 0.354294 8.3:-3362480 None:intergenic
AAAATCAAGTATCATGCAAA+TGG 0.364771 8.3:+3359918 MS.gene063054:CDS
AAAATCAAATATCATGCAAA+TGG 0.367440 8.3:+3366209 MS.gene063054:CDS
AATGTATGTTTCAGGATTCC+TGG 0.370219 8.3:-3358612 None:intergenic
TACATCCGAAGATTCCTTGC+TGG 0.370279 8.3:+3365685 MS.gene063054:CDS
CAATGCACTGCTTACGCTCT+TGG 0.370911 8.3:-3362044 None:intergenic
TGCATATCAGGATCGGCAAT+TGG 0.371500 8.3:+3361373 MS.gene063054:intron
CTTGCATGGTGGTGCCTTCA+AGG 0.376401 8.3:+3362712 MS.gene063054:CDS
TCCTCACTGGCCAAGTCCTT+GGG 0.378341 8.3:-3360121 None:intergenic
TCCTCACTGGCCAAGTCCTT+GGG 0.378341 8.3:-3366416 None:intergenic
ACAGAGAATTTGTGTGGATA+GGG 0.379221 8.3:-3357423 None:intergenic
ATTTCAAATAGGTTTGGTTC+AGG 0.380041 8.3:+3359875 MS.gene063054:intron
AATCTCTGACGTTGCACTAC+TGG 0.384930 8.3:-3367069 None:intergenic
GATTGAGAAACTAGAGAGTA+TGG 0.385113 8.3:+3366379 MS.gene063054:CDS
AGGTACATCTTGAGGTTTCA+TGG 0.386700 8.3:-3361626 None:intergenic
CCTATGATGAACACGATTGC+CGG 0.388946 8.3:+3365816 MS.gene063054:CDS
ACGGAGAATTTGTGTGGATA+GGG 0.389563 8.3:-3362450 None:intergenic
TCAGCAGCTGCAGGTCTGTT+AGG 0.390259 8.3:-3362230 None:intergenic
GATATGGAGGTTTAAGCAAT+GGG 0.394523 8.3:+3362502 MS.gene063054:CDS
GACGTGTCTGTGTCTTTGGC+TGG 0.395827 8.3:+3357510 MS.gene063054:CDS
GGTGACACTGTTGGTGTCAT+TGG 0.399682 8.3:+3357979 MS.gene063054:CDS
TTGGTGGTTTCCAGAGATGT+AGG 0.400233 8.3:-3362025 None:intergenic
TATCTCAAGCAGCTGGTTGT+TGG 0.400476 8.3:+3359625 MS.gene063054:CDS
TATCTCAAGCAGCTGGTTGT+TGG 0.400476 8.3:+3365918 MS.gene063054:CDS
TAATGACTACGACGACCTAA+TGG 0.402204 8.3:+3359750 MS.gene063054:CDS
AGATCATACCTTGAGTTGTT+CGG 0.404084 8.3:-3361097 None:intergenic
CCGGCAATCGTGTTCATCAT+AGG 0.404675 8.3:-3365816 None:intergenic
TTCCTCACTGGCCAAGTCCT+TGG 0.407696 8.3:-3360122 None:intergenic
TTCCTCACTGGCCAAGTCCT+TGG 0.407696 8.3:-3366417 None:intergenic
ACAGAACGGTAAAGGTCTTC+GGG 0.409569 8.3:-3358412 None:intergenic
TTCGTCAAAGCCTACATCTC+TGG 0.410149 8.3:+3362015 MS.gene063054:CDS
CTTGCTTCACAGAAGACAAA+AGG 0.410690 8.3:+3357393 MS.gene063054:CDS
TCAAACAACTGCTCGGTTGT+TGG 0.410955 8.3:+3360201 MS.gene063054:CDS
AAATCAAATATCATGCAAAT+GGG 0.412981 8.3:+3366210 MS.gene063054:CDS
TAGACTTCACTCCACCCTTC+AGG 0.413847 8.3:+3359964 MS.gene063054:CDS
TAGACTTCACTCCACCCTTC+AGG 0.413847 8.3:+3366255 MS.gene063054:CDS
GACAGAACGGTAAAGGTCTT+CGG 0.414717 8.3:-3358413 None:intergenic
AAATCAAGTATCATGCAAAT+GGG 0.415647 8.3:+3359919 MS.gene063054:CDS
TGCCAAAGGGCTCATGATCT+CGG 0.415986 8.3:-3360868 None:intergenic
GACAGCACTATAAAAGTCTT+GGG 0.416381 8.3:-3364099 None:intergenic
GATGTGTCTATTTCTTTGGC+TGG 0.418336 8.3:+3362537 MS.gene063054:CDS
TCAAACCACTGCTCGGTTGT+TGG 0.419167 8.3:+3366496 MS.gene063054:CDS
ACTTGCGTTTGTGCATAATT+CGG 0.423587 8.3:-3362664 None:intergenic
CTCAAGCAGCTGGTTGTTGG+TGG 0.428955 8.3:+3359628 MS.gene063054:CDS
CTCAAGCAGCTGGTTGTTGG+TGG 0.428955 8.3:+3365921 MS.gene063054:CDS
TGCAGCTGCTGATGAAGATA+TGG 0.431677 8.3:+3362241 MS.gene063054:CDS
TCATTGTGGTGAGTTACAAA+TGG 0.432241 8.3:-3365855 None:intergenic
GGTGACATTGTTGGTGTCAC+TGG 0.432373 8.3:+3363717 MS.gene063054:CDS
CAAGGTCATCAAGGTGCCTC+TGG 0.437123 8.3:-3359397 None:intergenic
GTTTGCCGCCAACTGGTGGT+TGG 0.437210 8.3:+3361450 MS.gene063054:CDS
GTTTGCCGCCAACTGGTGGT+TGG 0.437210 8.3:+3367467 MS.gene063054:CDS
CAATACATTGATACATATCA+AGG 0.438267 8.3:+3357462 MS.gene063054:CDS
TTGGTCACATTGCAGCTTGT+AGG 0.438724 8.3:+3366794 MS.gene063054:intron
CAGGAGGATTTATATGATTG+AGG 0.438912 8.3:+3360069 MS.gene063054:intron
CACGAACAATTCAAAACGTT+CGG 0.439954 8.3:-3366918 None:intergenic
GAAGGCCAGCAAGGAATCTT+CGG 0.443270 8.3:-3365690 None:intergenic
AATCTCTGACGTTGCACTAC+AGG 0.444229 8.3:-3361072 None:intergenic
CAATACAAACCTTTGATTGA+AGG 0.444973 8.3:-3361646 None:intergenic
GGAGTGAAGTCTATTTCAAT+AGG 0.446836 8.3:-3359954 None:intergenic
GGAGTGAAGTCTATTTCAAT+AGG 0.446836 8.3:-3366245 None:intergenic
TTGGTCACGTTGCAGCTTGT+AGG 0.448524 8.3:+3360795 MS.gene063054:intron
GCATGTCAGGATCGACAATC+AGG 0.450178 8.3:+3367391 MS.gene063054:intron
TGCCAATAATGCAAATTTGA+TGG 0.451707 8.3:+3364164 MS.gene063054:CDS
ATCTGTGCCACTTTGCCAAA+GGG 0.452813 8.3:-3360881 None:intergenic
TGGGCGAGCTGCTGCTCCAC+CGG 0.453842 8.3:-3365835 None:intergenic
CCGGCAATCTTGTTCATCAT+AGG 0.455324 8.3:-3359523 None:intergenic
TCCCGAGATCATGAGTCCTT+TGG 0.458594 8.3:+3366865 MS.gene063054:CDS
TGGTAAACAATTTAGAAATG+AGG 0.460542 8.3:+3365965 MS.gene063054:CDS
TCCCGAGATCATGAGCCCTT+TGG 0.461063 8.3:+3360866 MS.gene063054:CDS
AGACAGCACTATAAAAGTCT+TGG 0.463800 8.3:-3364100 None:intergenic
AAGAAATAGACACATCTTCA+AGG 0.464276 8.3:-3362530 None:intergenic
ATTATGCACAAACGCAAGTC+GGG 0.464340 8.3:+3362668 MS.gene063054:CDS
TGGCAAACAATTTAGAAATG+AGG 0.466304 8.3:+3359672 MS.gene063054:CDS
GCCAAAGGGCTCATGATCTC+GGG 0.466333 8.3:-3360867 None:intergenic
ACTTAGTATTCCCAAGGACT+TGG 0.467055 8.3:+3360111 MS.gene063054:CDS
GGTAAACAATTTAGAAATGA+GGG 0.469173 8.3:+3365966 MS.gene063054:CDS
ACATCTTGAGGTTTCATAGC+AGG 0.471022 8.3:-3367638 None:intergenic
CCTATGATGAACAAGATTGC+CGG 0.471130 8.3:+3359523 MS.gene063054:CDS
TTTATCTGTAGGGAAATCAA+TGG 0.471261 8.3:+3364262 MS.gene063054:intron
TGCACTGCTTACGCTCTTGG+TGG 0.473084 8.3:-3362041 None:intergenic
GGATGATTTATGATGAATGT+AGG 0.473787 8.3:-3360846 None:intergenic
GGATGATTTATGATGAATGT+AGG 0.473787 8.3:-3366845 None:intergenic
CTTACAGTGTCGGCAGTTGC+CGG 0.475235 8.3:-3356974 None:intergenic
TGCCAAAGGACTCATGATCT+CGG 0.475522 8.3:-3366867 None:intergenic
TCAAAACGTTCGGTCAGGCC+TGG 0.476366 8.3:-3366908 None:intergenic
AAGACACAGACACGTCTTCA+AGG 0.476872 8.3:-3357503 None:intergenic
GAGTATGGTTTGCCGCCAAC+TGG 0.476984 8.3:+3361443 MS.gene063054:CDS
GAGTATGGTTTGCCGCCAAC+TGG 0.476984 8.3:+3367460 MS.gene063054:CDS
GTTGGGGTTTGGGCATTGAT+CGG 0.479704 8.3:+3367485 MS.gene063054:CDS
TCCAGGTTATGGCTGATGTT+AGG 0.480005 8.3:+3362735 MS.gene063054:CDS
AATTATGAACAAAGACTCTT+CGG 0.480554 8.3:+3357639 MS.gene063054:CDS
TGATATTCTGCGAATCAGTC+AGG 0.481899 8.3:-3361502 None:intergenic
TGATGATGAAGCAATGGCCT+TGG 0.483609 8.3:+3367414 MS.gene063054:CDS
ACATCTTGAGGTTTCATGGC+AGG 0.484630 8.3:-3361622 None:intergenic
TGGACGAGCTGCTGCTCCAC+CGG 0.485920 8.3:-3359542 None:intergenic
CGGAGAATTTGTGTGGATAG+GGG 0.486022 8.3:-3362449 None:intergenic
AACAACCGAGCAGTTGTTTG+AGG 0.488757 8.3:-3360199 None:intergenic
TGAACTCTGGATTATGTGTA+AGG 0.488822 8.3:-3359702 None:intergenic
TTGGTTCAGGAACTTACAAA+TGG 0.492041 8.3:+3359888 MS.gene063054:CDS
CAGTGCATTGACGAGTGAAC+GGG 0.494165 8.3:+3362057 MS.gene063054:CDS
ACCTAACATCAGCCATAACC+TGG 0.494834 8.3:-3362736 None:intergenic
GCATATCAGGATCGGCAATT+GGG 0.495449 8.3:+3361374 MS.gene063054:intron
TAGAGAAATCTGTGGGTACC+AGG 0.495766 8.3:+3358584 MS.gene063054:intron
AACTCACAGGTAGTGAACTC+TGG 0.495866 8.3:-3359715 None:intergenic
GCCAAAGGACTCATGATCTC+GGG 0.496427 8.3:-3366866 None:intergenic
TTGCCGCCAACTGGTGGTTG+GGG 0.497993 8.3:+3361452 MS.gene063054:CDS
TTGCCGCCAACTGGTGGTTG+GGG 0.497993 8.3:+3367469 MS.gene063054:CDS
TCAAAACGTTCTGTCAGGCC+TGG 0.499909 8.3:-3360909 None:intergenic
CATTGTGGTGAGTTACAAAT+GGG 0.499930 8.3:-3365854 None:intergenic
AACAACCGAGCAGTGGTTTG+AGG 0.500335 8.3:-3366494 None:intergenic
TGTAGGAGTACCGTGAGAAT+AGG 0.501482 8.3:+3362388 MS.gene063054:intron
TGAAACATACATTACTGCTC+TGG 0.503261 8.3:+3361421 MS.gene063054:CDS
GAGGAACTAGAGAGTATGTC+AGG 0.504804 8.3:+3360088 MS.gene063054:CDS
AGCAAACCTCCATGAAATGA+AGG 0.508393 8.3:-3365708 None:intergenic
GCTGCTGAAATTCAACCTGC+TGG 0.508875 8.3:+3362206 MS.gene063054:CDS
CACCTCGTTCCACAGTAGAA+TGG 0.509380 8.3:-3357960 None:intergenic
ATATCTTCATCAGCAGCTGC+AGG 0.510477 8.3:-3362239 None:intergenic
TGGTGGTGCCTTCAAGGTCC+AGG 0.510882 8.3:+3362718 MS.gene063054:CDS
AGCTGCTTGAGATAAAGTTC+TGG 0.514028 8.3:-3359616 None:intergenic
AGCTGCTTGAGATAAAGTTC+TGG 0.514028 8.3:-3365909 None:intergenic
TCATTGTGGTGAGTTACAAA+TGG 0.514610 8.3:-3359562 None:intergenic
TTGCTTCACAGAAGACAAAA+GGG 0.514772 8.3:+3357394 MS.gene063054:CDS
GCAGGTCTGTTAGGTCCAGC+AGG 0.518131 8.3:-3362221 None:intergenic
ACAACCGAGCAGTGGTTTGA+GGG 0.518422 8.3:-3366493 None:intergenic
ACAACCGAGCAGTTGTTTGA+GGG 0.520606 8.3:-3360198 None:intergenic
CAGAGAATTTGTGTGGATAG+GGG 0.522588 8.3:-3357422 None:intergenic
AACAAACCTCCATAAAATCA+AGG 0.522859 8.3:-3359415 None:intergenic
TCAACTCAAAACGTTCTGTC+AGG 0.525134 8.3:-3360914 None:intergenic
TGAAAAGAAGGTACATCTTG+AGG 0.525637 8.3:-3367650 None:intergenic
AGTTGCCGGAGGTTTAGGTT+CGG 0.527576 8.3:-3356960 None:intergenic
GACGAGTGAACGGGACAGAC+AGG 0.527816 8.3:+3362066 MS.gene063054:CDS
GTTGGGGTTTGGGTATTGAT+CGG 0.528015 8.3:+3361468 MS.gene063054:CDS
AATCTGTGCCACTTTGCCAA+AGG 0.528215 8.3:-3360882 None:intergenic
ACTTACTATTCCCAAGGACT+TGG 0.528844 8.3:+3366406 MS.gene063054:CDS
CAAGATGTACCTTCAATCAA+AGG 0.530991 8.3:+3361637 MS.gene063054:CDS
TGCCAATAATGCAAATTTGA+CGG 0.531770 8.3:+3358481 MS.gene063054:CDS
ACAATTCAAAACGTTCGGTC+AGG 0.534482 8.3:-3366913 None:intergenic
GACGGAGAATTTGTGTGGAT+AGG 0.534750 8.3:-3362451 None:intergenic
AGAACTTTATCTCAAGCAGC+TGG 0.534987 8.3:+3359618 MS.gene063054:CDS
AGAACTTTATCTCAAGCAGC+TGG 0.534987 8.3:+3365911 MS.gene063054:CDS
AGATATGGAGGTTTAAGCAA+TGG 0.535581 8.3:+3362501 MS.gene063054:CDS
TTCGTCCGAACCTAAACCTC+CGG 0.537314 8.3:+3356955 MS.gene063054:CDS
CACCTCGCTTCACATTAGAA+TGG 0.537962 8.3:-3363698 None:intergenic
AATTCAATATCAAATCCAAA+TGG 0.541200 8.3:-3359325 None:intergenic
TTATCTGTAGGGAAATCAAT+GGG 0.542991 8.3:+3364263 MS.gene063054:intron
GAAGCAATGGCCTTGGATGA+AGG 0.543335 8.3:+3367421 MS.gene063054:CDS
TTGATTGAAGGTACATCTTG+AGG 0.543618 8.3:-3361634 None:intergenic
AATTATGCACAAACGCAAGT+CGG 0.545040 8.3:+3362667 MS.gene063054:CDS
ATATCTTCATCAGCAGAGGC+AGG 0.545332 8.3:-3357107 None:intergenic
TGAAGCAAGATAACTAAGCC+TGG 0.547388 8.3:-3357379 None:intergenic
TAGGGAAATCAATGGGTACC+AGG 0.548143 8.3:+3364270 MS.gene063054:intron
GGACGAAGTAGCTTCTTCCA+TGG 0.549805 8.3:-3356939 None:intergenic
AACAGAGAATTTGTGTGGAT+AGG 0.550068 8.3:-3357424 None:intergenic
CAATACATTGATAGATATGG+AGG 0.550891 8.3:+3362489 MS.gene063054:CDS
TGTGGGTACCAGGAAGTACC+AGG 0.553333 8.3:+3358594 MS.gene063054:CDS
CATCTTGAGGTTTCATGGCA+GGG 0.556920 8.3:-3361621 None:intergenic
AAACCCCAACCACCAGTTGG+CGG 0.558933 8.3:-3361455 None:intergenic
AAACCCCAACCACCAGTTGG+CGG 0.558933 8.3:-3367472 None:intergenic
GACTGATTCGCAGAATATCA+AGG 0.559590 8.3:+3361505 MS.gene063054:CDS
GAGAAACTAGAGAGTATGGC+AGG 0.559839 8.3:+3366383 MS.gene063054:CDS
CATCTTGAGGTTTCATAGCA+GGG 0.560185 8.3:-3367637 None:intergenic
ACAATGAGACAGAACGGTAA+AGG 0.560210 8.3:-3358420 None:intergenic
AGCCATAACCTGGACCTTGA+AGG 0.561992 8.3:-3362726 None:intergenic
ACATATCAAGGGTTAAGTAA+TGG 0.569115 8.3:+3357474 MS.gene063054:CDS
CAGGATATCCGACTTGGATG+AGG 0.569983 8.3:+3357921 MS.gene063054:intron
TGTCCAGGGAAAAGTAAGAC+AGG 0.573002 8.3:+3364060 MS.gene063054:intron
GTGAAGCGAGGTGACATTGT+TGG 0.573651 8.3:+3363708 MS.gene063054:CDS
CCATAAAATCAAGGTCATCA+AGG 0.574422 8.3:-3359406 None:intergenic
GCAGCTGGTTGTTGGTGGGA+TGG 0.575523 8.3:+3359633 MS.gene063054:CDS
GCAGCTGGTTGTTGGTGGGA+TGG 0.575523 8.3:+3365926 MS.gene063054:CDS
GCAGTGCATTGACGAGTGAA+CGG 0.575879 8.3:+3362056 MS.gene063054:CDS
AATCTGTGCCACTTTGCCAA+AGG 0.576290 8.3:-3366881 None:intergenic
GAGATTTGCCGAACAACTCA+AGG 0.577714 8.3:+3361089 MS.gene063054:CDS
ATCAGGTGATGATGAAGCAA+TGG 0.577823 8.3:+3367408 MS.gene063054:CDS
ATGGTTCACGAACTCACAAA+GGG 0.580731 8.3:+3366179 MS.gene063054:CDS
TGTCCAGGGAAAAGCGAGGA+AGG 0.581394 8.3:+3358374 MS.gene063054:intron
TCATGAGCCCTTTGGCAAAG+TGG 0.581802 8.3:+3360874 MS.gene063054:CDS
TCATGAGTCCTTTGGCAAAG+TGG 0.581802 8.3:+3366873 MS.gene063054:CDS
CTTGCTGCACTGAAGACAGA+AGG 0.584097 8.3:+3362420 MS.gene063054:CDS
GGGATGCAGGATATCCGACT+TGG 0.585560 8.3:+3357915 MS.gene063054:intron
CCCAAACCCCAACCACCAGT+TGG 0.586950 8.3:-3367475 None:intergenic
ATAAGCCATATAAAACTCAC+AGG 0.586968 8.3:-3359728 None:intergenic
AACTCACATGTAGTGAACTC+AGG 0.587093 8.3:-3366008 None:intergenic
TGACCTCAAGGGTGGCGTCA+AGG 0.590788 8.3:+3357681 MS.gene063054:CDS
GAGATTTGCTGAACAACTCA+AGG 0.591967 8.3:+3367086 MS.gene063054:CDS
GACTGATTCACAGAATATCA+AGG 0.592348 8.3:+3367522 MS.gene063054:CDS
CAGAAAATCTGACTTGAATG+AGG 0.596663 8.3:+3363659 MS.gene063054:intron
TCAAGCAGCTGGTTGTTGGT+GGG 0.599873 8.3:+3359629 MS.gene063054:CDS
TCAAGCAGCTGGTTGTTGGT+GGG 0.599873 8.3:+3365922 MS.gene063054:CDS
CCCAAACCCCAACCACCAGT+TGG 0.600185 8.3:-3361458 None:intergenic
CCATGAAATGAAGGCCAGCA+AGG 0.603953 8.3:-3365699 None:intergenic
TTGCAAATTCCATTCTACTG+TGG 0.605267 8.3:+3357951 MS.gene063054:CDS
TGCTGGCCTTCATTTCATGG+AGG 0.605307 8.3:+3365702 MS.gene063054:CDS
AACCGAGCAGTTGTTTGAGG+GGG 0.606061 8.3:-3360196 None:intergenic
GTCAGGACTTAGTATTCCCA+AGG 0.606351 8.3:+3360105 MS.gene063054:CDS
GATACTTAAGCCTATTCTCA+CGG 0.607728 8.3:-3362398 None:intergenic
TATGGTTTGCCGCCAACTGG+TGG 0.610148 8.3:+3361446 MS.gene063054:CDS
TATGGTTTGCCGCCAACTGG+TGG 0.610148 8.3:+3367463 MS.gene063054:CDS
CAACCGAGCAGTGGTTTGAG+GGG 0.610155 8.3:-3366492 None:intergenic
TGCAGCAATACACTGAGACC+AGG 0.610650 8.3:+3357361 MS.gene063054:intron
AAATCATTTCTTACATCCAG+AGG 0.610808 8.3:+3359381 MS.gene063054:CDS
AATACATTGATACATATCAA+GGG 0.612680 8.3:+3357463 MS.gene063054:CDS
ATATTGATTAGCTTCCTCAC+TGG 0.615270 8.3:-3360134 None:intergenic
ATATTGATTAGCTTCCTCAC+TGG 0.615270 8.3:-3366429 None:intergenic
GGCAGGACTTACTATTCCCA+AGG 0.615415 8.3:+3366400 MS.gene063054:CDS
TGAAGATATCATCGATCCAA+AGG 0.617996 8.3:+3357121 MS.gene063054:CDS
TTATCTGTAGAGAAATCTGT+GGG 0.620570 8.3:+3358577 MS.gene063054:intron
CAAGCAGGTACTTACAGTGT+CGG 0.622087 8.3:-3356984 None:intergenic
TTGCTGCACTGAAGACAGAA+GGG 0.623014 8.3:+3362421 MS.gene063054:CDS
TGATGAAGATATGGACCCAA+AGG 0.623582 8.3:+3362250 MS.gene063054:CDS
AATCAAATATCATGCAAATG+GGG 0.623882 8.3:+3366211 MS.gene063054:CDS
AAATTTAGACTGCACCTGAA+GGG 0.623943 8.3:-3359978 None:intergenic
TCCCAAGGACTTGGCCAGTG+AGG 0.624949 8.3:+3366415 MS.gene063054:CDS
ACAGTGTCGGCAGTTGCCGG+AGG 0.625448 8.3:-3356971 None:intergenic
TTTAGACTGCACCTGAAGGG+TGG 0.625534 8.3:-3359975 None:intergenic
TCCCAAGGACTTGGCCAGTG+AGG 0.627431 8.3:+3360120 MS.gene063054:CDS
TTCCATTCTAATGTGAAGCG+AGG 0.628364 8.3:+3363696 MS.gene063054:CDS
TTTATCTGTAGAGAAATCTG+TGG 0.629536 8.3:+3358576 MS.gene063054:intron
TAACCTTGACGCCACCCTTG+AGG 0.631000 8.3:-3357684 None:intergenic
TATGGTTCACGAACTCACAA+AGG 0.632329 8.3:+3366178 MS.gene063054:CDS
CAACCGAGCAGTTGTTTGAG+GGG 0.632537 8.3:-3360197 None:intergenic
ATAGAAACAGAGAATTTGTG+TGG 0.634714 8.3:-3357429 None:intergenic
TTTATCCAACAACCGAGCAG+TGG 0.636466 8.3:-3366501 None:intergenic
ACTTCAAGTCAAGTTCATTG+TGG 0.642009 8.3:-3365869 None:intergenic
AATCAAGTATCATGCAAATG+GGG 0.644371 8.3:+3359920 MS.gene063054:CDS
ATGATGAACACGATTGCCGG+TGG 0.645481 8.3:+3365819 MS.gene063054:CDS
AAATTCAACCTCATCCAAGT+CGG 0.645584 8.3:-3357929 None:intergenic
AGGAAGCTAATCAATATCTG+AGG 0.649505 8.3:+3360140 MS.gene063054:CDS
TCAAGGTTATTGCTGATGCA+CGG 0.651198 8.3:+3357698 MS.gene063054:CDS
GATGATATCTTCATCAGCAG+AGG 0.652024 8.3:-3357111 None:intergenic
AACCGAGCAGTGGTTTGAGG+GGG 0.655651 8.3:-3366491 None:intergenic
TTGAACAATAGGCATAGAGA+CGG 0.656187 8.3:-3362469 None:intergenic
GTGCAGACAATGAGACAGAA+CGG 0.656626 8.3:-3358426 None:intergenic
ATAACAGAGAAAATGTTGAG+TGG 0.661557 8.3:+3366068 MS.gene063054:CDS
TTGCATGCACTGCACCTGAA+GGG 0.661615 8.3:-3366269 None:intergenic
CATGCACTGCACCTGAAGGG+TGG 0.662706 8.3:-3366266 None:intergenic
ACAGCACTATAAAAGTCTTG+GGG 0.665362 8.3:-3364098 None:intergenic
ATAACAGAGAAAATGTTGAG+TGG 0.671427 8.3:+3359775 MS.gene063054:CDS
ATGATGAACAAGATTGCCGG+TGG 0.672460 8.3:+3359526 MS.gene063054:CDS
AAGTGGCACAGATTGAAACC+AGG 0.673243 8.3:+3360891 MS.gene063054:CDS
TTCCATTCTACTGTGGAACG+AGG 0.682210 8.3:+3357958 MS.gene063054:CDS
AAGTGGCACAGATTAAAACC+AGG 0.689648 8.3:+3366890 MS.gene063054:CDS
GTGGAACGAGGTGACACTGT+TGG 0.695961 8.3:+3357970 MS.gene063054:CDS
ATAGAGACGGAGAATTTGTG+TGG 0.699741 8.3:-3362456 None:intergenic
ACTTCATGTCAAGATCATTG+TGG 0.702739 8.3:-3359576 None:intergenic
ATATGGAGGTTTAAGCAATG+GGG 0.752839 8.3:+3362503 MS.gene063054:CDS
CAATTGTCCAGGGAAAAGCG+AGG 0.767711 8.3:+3358370 MS.gene063054:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr8.3 gene 3356941 3367676 3356941 ID=MS.gene063054
chr8.3 mRNA 3356941 3367676 3356941 ID=MS.gene063054.t1;Parent=MS.gene063054
chr8.3 exon 3356941 3356991 3356941 ID=MS.gene063054.t1.exon1;Parent=MS.gene063054.t1
chr8.3 CDS 3356941 3356991 3356941 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3357083 3357142 3357083 ID=MS.gene063054.t1.exon2;Parent=MS.gene063054.t1
chr8.3 CDS 3357083 3357142 3357083 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3357366 3357531 3357366 ID=MS.gene063054.t1.exon3;Parent=MS.gene063054.t1
chr8.3 CDS 3357366 3357531 3357366 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3357635 3357719 3357635 ID=MS.gene063054.t1.exon4;Parent=MS.gene063054.t1
chr8.3 CDS 3357635 3357719 3357635 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3357924 3358009 3357924 ID=MS.gene063054.t1.exon5;Parent=MS.gene063054.t1
chr8.3 CDS 3357924 3358009 3357924 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3358381 3358502 3358381 ID=MS.gene063054.t1.exon6;Parent=MS.gene063054.t1
chr8.3 CDS 3358381 3358502 3358381 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3358587 3358646 3358587 ID=MS.gene063054.t1.exon7;Parent=MS.gene063054.t1
chr8.3 CDS 3358587 3358646 3358587 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3359305 3359430 3359305 ID=MS.gene063054.t1.exon8;Parent=MS.gene063054.t1
chr8.3 CDS 3359305 3359430 3359305 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3359514 3359796 3359514 ID=MS.gene063054.t1.exon9;Parent=MS.gene063054.t1
chr8.3 CDS 3359514 3359796 3359514 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3359886 3359985 3359886 ID=MS.gene063054.t1.exon10;Parent=MS.gene063054.t1
chr8.3 CDS 3359886 3359985 3359886 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3360072 3360228 3360072 ID=MS.gene063054.t1.exon11;Parent=MS.gene063054.t1
chr8.3 CDS 3360072 3360228 3360072 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3360810 3360953 3360810 ID=MS.gene063054.t1.exon12;Parent=MS.gene063054.t1
chr8.3 CDS 3360810 3360953 3360810 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3361042 3361110 3361042 ID=MS.gene063054.t1.exon13;Parent=MS.gene063054.t1
chr8.3 CDS 3361042 3361110 3361042 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3361383 3361526 3361383 ID=MS.gene063054.t1.exon14;Parent=MS.gene063054.t1
chr8.3 CDS 3361383 3361526 3361383 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3361607 3361658 3361607 ID=MS.gene063054.t1.exon15;Parent=MS.gene063054.t1
chr8.3 CDS 3361607 3361658 3361607 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3362008 3362087 3362008 ID=MS.gene063054.t1.exon16;Parent=MS.gene063054.t1
chr8.3 CDS 3362008 3362087 3362008 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3362206 3362271 3362206 ID=MS.gene063054.t1.exon17;Parent=MS.gene063054.t1
chr8.3 CDS 3362206 3362271 3362206 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3362393 3362558 3362393 ID=MS.gene063054.t1.exon18;Parent=MS.gene063054.t1
chr8.3 CDS 3362393 3362558 3362393 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3362663 3362756 3362663 ID=MS.gene063054.t1.exon19;Parent=MS.gene063054.t1
chr8.3 CDS 3362663 3362756 3362663 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3363662 3363747 3363662 ID=MS.gene063054.t1.exon20;Parent=MS.gene063054.t1
chr8.3 CDS 3363662 3363747 3363662 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3364067 3364185 3364067 ID=MS.gene063054.t1.exon21;Parent=MS.gene063054.t1
chr8.3 CDS 3364067 3364185 3364067 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3364273 3364332 3364273 ID=MS.gene063054.t1.exon22;Parent=MS.gene063054.t1
chr8.3 CDS 3364273 3364332 3364273 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3365598 3365723 3365598 ID=MS.gene063054.t1.exon23;Parent=MS.gene063054.t1
chr8.3 CDS 3365598 3365723 3365598 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3365807 3366089 3365807 ID=MS.gene063054.t1.exon24;Parent=MS.gene063054.t1
chr8.3 CDS 3365807 3366089 3365807 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3366177 3366276 3366177 ID=MS.gene063054.t1.exon25;Parent=MS.gene063054.t1
chr8.3 CDS 3366177 3366276 3366177 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3366367 3366523 3366367 ID=MS.gene063054.t1.exon26;Parent=MS.gene063054.t1
chr8.3 CDS 3366367 3366523 3366367 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3366809 3366952 3366809 ID=MS.gene063054.t1.exon27;Parent=MS.gene063054.t1
chr8.3 CDS 3366809 3366952 3366809 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3367039 3367107 3367039 ID=MS.gene063054.t1.exon28;Parent=MS.gene063054.t1
chr8.3 CDS 3367039 3367107 3367039 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3367400 3367543 3367400 ID=MS.gene063054.t1.exon29;Parent=MS.gene063054.t1
chr8.3 CDS 3367400 3367543 3367400 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
chr8.3 exon 3367623 3367676 3367623 ID=MS.gene063054.t1.exon30;Parent=MS.gene063054.t1
chr8.3 CDS 3367623 3367676 3367623 ID=cds.MS.gene063054.t1;Parent=MS.gene063054.t1
Gene Sequence

>MS.gene063054

ATGGAAGAAGCTACTTCGTCCGAACCTAAACCTCCGGCAACTGCCGACACTGTAAGTACCTGCTTGCATTAAGGTTTGATCATCATCATCATCATCATCGTGCTATTTTCGAATGCAATTTTATTTTGTTTTTTATTTTCAGGCTGCTGCTCGACCTAAAAGAAGACCTGCCTCTGCTGATGAAGATATCATCGATCCAAAGGTATGCACGCATCTTATTTTTGTCACTGCAGATTTCTCTCTCACCAATCGCGGAAAATAGCGACTTGTTCAAATTCCACTACACAAGAGCGCTGCTGCTATAGCCACCAATTGACTACAATTTGTACTAAATAACGTATCTTAGAATAATAGGTTCTATTTAAAAACAATGCTATTTGATTGATTAAACTTATTTTTCTTCCACATGATTATTTTAACTGCAGCAATACACTGAGACCAGGCTTAGTTATCTTGCTTCACAGAAGACAAAAGGGAATAACCCCTATCCACACAAATTCTCTGTTTCTATGACTATTCTTCAATACATTGATACATATCAAGGGTTAAGTAATGGAGAACACCTTGAAGACGTGTCTGTGTCTTTGGCTGGTTTGTAGTCTCCAGTTTCTATTTCAACGTTTTTGTTTGTGGTCTCTTGTGTTGTTGCTGACTTACTGTATATGTTGATGGTAATTGTCTTTCTGCGTGTTAGGCCGAATTATGAACAAAGACTCTTCGGATGCAAAGCTTGTCTTTTATGACCTCAAGGGTGGCGTCAAGGTTATTGCTGATGCACGGTACATTATGTTGCCACGTTCTGTGGCATCCCTTTGCCTTCTTAGCTTGATGTTTGACTAACTTTGTAGCAGTTGGATGGTTTTTCAACTTGCTTCTATTGCCTTTTCAAAAATCTAATTTTTTTTTACCTTCTTAAATAGAACCTATACTACATTTTCTTTTTTTATTCCACAACTAAAACAAGTTTTATCCCCGGGATGCAGGATATCCGACTTGGATGAGGTTGAATTTTGCAAATTCCATTCTACTGTGGAACGAGGTGACACTGTTGGTGTCATTGGATTTCCAGGTTTAAGATGTTACAATGTTTTAGTTGCTTAAATAATCAAATATGTTCTTTCTTCTTATTTCATTTCCCTTTTTGAGCTGTCTTTCTTGGATTTGACTCCTCTAAAGTGAGGGGTGTGAGTGTGATAGTATGACATTATAAGTTAATAACTACGTATTGGAAAATCAATGGTTAGATTTTAAGTTCTTCATAGTTTGTTATATACGTGCTTGTATTTTAGCACAATCGTAACAGTTGATTTTACGATCAACGGCACTTTATGCTCTAAAGTGTACCCCCCCTCATTATAGGAGCCAAATCCGTCTTTCTTTCTTTCTTTCTTTCTGTCTGTATACATTTTAAGCCTGTTATTCCCTTGTTCAATTGTCCAGGGAAAAGCGAGGAAGGAGAACTTAGTATTTTCCCGAAGACCTTTACCGTTCTGTCTCATTGTCTGCACTTCATACCCAATCAAAAGTCTGCTGCTGCTGCTGCCAATAATGCAAATTTGACGGTGAACATAATTTCTTTTGGTGTTTGATAATGCTACATTGATATTCATACGTAGTGACATCCTTATTTCATTATTTATCTGTAGAGAAATCTGTGGGTACCAGGAAGTACCAGGAATCCTGAAACATACATTTTGAAGGATCAGGTATTATTAGTATGAAAAGTACTTTGATTATTTCTTTCATTGCTGTTGTTTGTTTATAAAAATATTCTTTAGCGTATACTATCTCATTTTTTTGGGATTTATTTTCAAGCAGATGGCAATAAAATGGTAACATGTTTTACTGAGAAAATGCAGTATACCATCCTTTTTTTTATGGCTAGGGGTGGGGGTTAGAAATGGATTGATATAGACAATTATTAGGCATTTTCTATCACTATTTTGTTGTATGATTGGCATTCATTTTTCTAATTACTTTGCAAAGATAAAGCTGCTGTTATTCATAACCATAAGAATATATTTAAGTGAAATTTGATGTTTAAGCTTACACTAGGCCATGCACCTGCTTGATATTATATTAGGATTTTCCCTTTCCAATTTTCTGTTTGCTAAAGTTTGCACATTGATTTCTATTCAAAATTGAACAAAGAAAACCTTAATTATTAATCAAAATCATGAATCTTTTGCCTCACCATCCATTATGACTTAAGCTGCACAAGCATTCTCTTTATAAAAATAAGAATATGGTGTGTTCTGATCTGAGATGTGAAGTTGGGGAGAAGGGATTTGATGTATCCTTTGTTCTTTTTCTTTCTATTAATAGTGGTTTCTTTTCTTATTTCAACGTAATTGTCTTGTATAGGAAACAAGATATCGTTTACGCCATTTGGATTTGATATTGAATTCAGATATTCAAGAAATATTCCACACTAGAAATAAAATCATTTCTTACATCCAGAGGCACCTTGATGACCTTGATTTTATGGAGGTTTGTTCTCTGTCCAAGTATTCTGATGCCAGTTGCTTATACTATCTTCCATTCCCTTTACCTATTCTTTTCACTACTTTCAGGTTGAAACACCTATGATGAACAAGATTGCCGGTGGAGCAGCAGCTCGTCCATTTGTAACTCACCACAATGATCTTGACATGAAGTTATTCATGAGAATTGCTCCAGAACTTTATCTCAAGCAGCTGGTTGTTGGTGGGATGGAACGTGTTTATGAAATTGGCAAACAATTTAGAAATGAGGATATAGACCTTACACATAATCCAGAGTTCACTACCTGTGAGTTTTATATGGCTTATAATGACTACGACGACCTAATGGCGATAACAGAGAAAATGTTGAGTGGTAAGAATTATTAAGGTCTATTGGTTGCTATATTTGAATTTATCTTCTTCATGTGTTGTTAATCTCATGATGTGGCAAATTTCAAATAGGTTTGGTTCAGGAACTTACAAATGGAAGCTATAAAATCAAGTATCATGCAAATGGGGTTGATAAAGATCCTATTGAAATAGACTTCACTCCACCCTTCAGGTGCAGTCTAAATTTGTCACTCATCAATTGAGATTATAAAATCTATTATATTTTTTCATAACTCATTTGGATTTTTAATTTTACAGGAGGATTTATATGATTGAGGAACTAGAGAGTATGTCAGGACTTAGTATTCCCAAGGACTTGGCCAGTGAGGAAGCTAATCAATATCTGAGGAATGCATGCTTGAAGTATGACATCAAATGCGCTCCCCCTCAAACAACTGCTCGGTTGTTGGATAAAGTAATTCACGATCTGTTTCTTTGTTGGCCTGTAATATGCTTTATTTTCAAATTTTGTTTTTATTCAAAAGCAGGTTGTAACCTCTTTTCTCTTCTTGAAATCGAGCAAAAAATTAATTTGCCTGGTTTGCAGTTGATCAACAGATATGAACATAAAAGTTCATATATTCTGTTAATAAGAAAAGGTTCAGATATTGGATTAAAATATGGTCTTATCTGCTTTGCATAGAAATCTGGGACACTCGTTTTTTTCGTTTTGGTGGTGGGGGGTTAAAAAATTACGTGCATTTTTACTCTATCTCATACAACAGATAACCGTTCAGCAACTGATATAACTCTATTTTCTGGATATGAGGTCTTTCTCCTATAAAAAAAGTTAGAATTGTGATCTTCGTGGCATATGGCTTCAAATAGTGGTTATTGGTTGCTGATATGGTCACTCTATTCTTCAGTTGTCTTTTTTACCTGCGTCTGTTCTCATGGAAATTAATCAGGGGTGTTGGCTAGGTCGTTAAATGCTCACATATTTAGTCATTTGATCAATAAGCTGTTATTTATGATGCTATTTTGGTCACGTTGCAGCTTGTAGGCCACTTTTTGGAAGAAACATGTATCAATCCTACATTCATCATAAATCATCCCGAGATCATGAGCCCTTTGGCAAAGTGGCACAGATTGAAACCAGGCCTGACAGAACGTTTTGAGTTGATTGTTAATAAGCTTAAAGTAAGTTCATGAACTCAGGTGATTATTATTAGTAAAAGCAAGTTAACAACTTTTTTATTCTTGTAACTGTTTTTCTGTTAACTTTCAGCTTTGCAATGCATATACTGAATTGAATGATCCTGTAGTGCAACGTCAGAGATTTGCCGAACAACTCAAGGTATGATCTAAAGATTAGCTTACTAAACTAATTATATGCTCTAATTGTTTTTTTAAGAGATGTGTGGACAATGTTTTTTTTTACACATGCATCCCATCAAATCACTATATGACATTACTTTGCTATTTAGTTCTTAAAATATTTCTAAAAATATCTATACGCTGTGATTGGTTGCATGTGTAAAATATTGTATACTACAATGCACACGAATTAAATCTTTTTTTGATTCAAAGTAAAAATAACTAATTGGTCTATGCTTCTCTGCATATCAGGATCGGCAATTGGGTGATGATGAAGCAATGCTCTTAGATGAAACATACATTACTGCTCTGGAGTATGGTTTGCCGCCAACTGGTGGTTGGGGTTTGGGTATTGATCGGTTGACAATGATCCTGACTGATTCGCAGAATATCAAGGTTCTTGGTCTTTCTCATTCTCTGCATGTTTAATTTTGTTTTTGTAAATTCTTACATTCTTGGTTCCTTTTGGGTTACAGGAAGTTCTTCTCTTCCCTGCCATGAAACCTCAAGATGTACCTTCAATCAAAGGTTTGTATTGTACATGCGTTCACCTTTTTTTTTAATTGAAAATTAAGGTGAAGAAAAATGTTTGTTTAGATATGTTGCTCATGTTGGTCTTCTTAACTATATATCCATTTAAAATAATTCTGAGTTTCTTTACTATTCCTACCCCTAGCCATATATATTTGAAAAAAGAGCTAAAACGTGCATACCAAGTTTCTTTTTTTATATGCATATATTTGGAATAAGTTATCAGCCAACAATAAAAGGAATCAGTTACATTTAGCACAACATAGAGGGAGGGAATTGAAGGACGCTGCAAAATCATAATCTGTAGTTTTAATTGCTTTGTCTCATTTGAATTGGTTGATAATAGAAGCTATTTCGTCAAAGCCTACATCTCTGGAAACCACCAAGAGCGTAAGCAGTGCATTGACGAGTGAACGGGACAGACAGGTTACTCTCTTTCCCATTCTCAATCTTCATTTCCTTTGATTAGGATTAGTTACTGATTAAGATTGTTAGGATTATCGATGTATCATGAATGCTATTTTATTTTGTTTTTGATATTTAGGCTGCTGAAATTCAACCTGCTGGACCTAACAGACCTGCAGCTGCTGATGAAGATATGGACCCAAAGGTATGTATGGTTCCTCTTTTTGTCATTGCAATGATTTCAAATTGTGATTTCTCTCCGACTAATGATATACTATTTGATTGATTGAACTTTGTTTTTCCTACCTGTTTTAATTTAACTGTAGGAGTACCGTGAGAATAGGCTTAAGTATCTTGCTGCACTGAAGACAGAAGGGATTAACCCCTATCCACACAAATTCTCCGTCTCTATGCCTATTGTTCAATACATTGATAGATATGGAGGTTTAAGCAATGGGGAGCACCTTGAAGATGTGTCTATTTCTTTGGCTGGTTAGTAGTCGCCAATTTCTATTTGATTTTTTTTTTTTTTTTTTAGTTTGTGATCTCTTGTATTCTTGCTGTATGTTGATGCTAATTGTCTTTCTGCGTGTTAGGCCGAATTATGCACAAACGCAAGTCGGGTAAAAAGCTTTTCTTTTATGACTTGCATGGTGGTGCCTTCAAGGTCCAGGTTATGGCTGATGTTAGGTACGTTACGTTGCTATTTTGATCTATAACATACCAAAACGTCCATTCTGAAAATGTTTTTAAATAGAAACAGACTATTGTCATCGATACGATAATCGTTCTTATGTTGTCATTTTTTTTTAGTGTAGCCTGTATACCTAAATAAACAGTGTAGCTTGTCGCCCCCTATATATGATCTGGATTCAGTTTCTGATTGAATTGTTATTTTGAGTGGCTGATGCAATATATCAAAAATTTATTGATCAAGCAGCTTGTACAAGAAAATTAAAGTTGTCACCCCTAGTTGATTGAATTGCTTATAATAATTTCCAGTGGTTCATGTGTTCTATTGTTCATTCAATGGTTATTATTTTATGATTCTGTTCATTAGATGGGAAAAGAAAACCAATGGTTGCTAACCTCCCTTCCCTTTAGATAAAAATCTGGCCTATGACATCGAGGTATAAATGAAATTTCAAATTTAAGCACTTTGTTTAAGTACATCAGGTACCAATTTGCAAAAATGCAGCAGTTGTACCTCAGTTTTCATTAGTCGACTTGAAGTAAAAACGTGGCAAGACAAAATATCATGTCTAAAGTTTTACAATTTGAAGAAAAACTCCTGTCTCACTAAACATCACCATAATTGAGAAATGTGTGATTAAAACAAGACAAATTAATGCATTTCAAATTGAAGGATATACAAATCCTGTCATACAACTAGACATCATGATAAGAACAATTATCATATTGTTCACAATGTTCTGTTTCTATTCAACTATGTGTTTTGTGTAAGATGAAAAATAAGTTTTAGGGATAGAGCTATACGGTGTAGTATCCCTTTTCCTTCTTACTTTGATGTTTGACATTACCTTCTTTTTTTTTTATTGCACAAAACTAAAACAAGTTATATCTCTGGGATGCAGAAAATCTGACTTGAATGAGGTTGAATTTGGCAAATTCCATTCTAATGTGAAGCGAGGTGACATTGTTGGTGTCACTGGATTTCCAGGTTTGAGATGTTACCAAGTTTTAGTTTTCTTAAATAGTCAAATATGTTCTCTCTTATTTATTTCATTTCCCTTTTTGAGTTGTCTTTATTGGATTTGACTCCTCTTAAGTGAGGGGTGTGTGTGATAATATGCCATTATAAGTTTAAAACTATGAATTGAAAAATCAATGATTAGATTTTAAGATCTTCATAGTTTGTTTTATATGTGCTTGTATTTTAGCACAATCTAAACAGTTGATTTTCTGATCAACGGTACTTTATCGTCTAAAGTGCTTCTGTATATGTTTTAAGCCTTTTATTCCCTTGTCCGATTGTCCAGGGAAAAGTAAGACAGGAGAGCTTAGCATTTTCCCCAAGACTTTTATAGTGCTGTCTCATTGTCTGCACTTGATGCCCAACCAAAAGTCTGCTGCTGCTGCCAATAATGCAAATTTGATGGTGAACATAATTTCTCTTGGTGTTTGATACTAGTTGATACTTGACATTCATACATAGTTACATCCTTATTTTATTATTTATCTGTAGGGAAATCAATGGGTACCAGGAAGTACCAGAAGCCCTGAAAAATACATTTTAAAGGATCAGGTATTATTAGTCTTGAAAGTACTTGGATATTTTCTTTCATTGGGGTTTATTTTCAAGCAGATTGTAATTAAATGGAAACACATGTTACTGAGAAAATGTTAGGGTGCAATAGCATTCAGTACTGCATTTCTCTCACTATTATGTAGTATGATTAGCATTCATTTTTCTAATTGTGTTGCAAAAATGAAGTTATTGTTATTCATGCACATATGGATCTATTTAAGTAAAATTTGATGTTTGAGTTCAAACTAGGCCATACACCTGCTTGATATTATATTAGGATTTTCCTTTTTCAATTTGATGTTTGCTAAAATTTGCACGTTGATTTCTATTCAAAATTGAACAAAGAAAATCTTAATTATTAATCAACAGCATGGACCTTTCGTCTCACCATCCATTATGGCTTAAGCTGTGAAAGCATTCTATTTGTAAGAATAGTGTGTTCTTATCTGAGATGTGAAGTTGGGGAATAGGGATTTCATGCATCCTTTGTTCTTTTTCTTTCTATAGATTAAATCATAGTCACATAATTCGCGGTTCGTTCCGGTACGTGGTACGGGTACGGGTTCGCGGTACGCGACAGGAGAAGAATTCGGTACGTATAGGGGTATACAGCTTCGGTACGCTCCTGTTCGTAGTACTAATTAGAAAAAAGTATTTTTTTTACTAAAACTTTTAATTACAAAAAATATATTTATAGATTTTCTAAAAAAAAAGTAGTTTAGTTAAAAAAGAAAAGAGTTTACTTCTTAAAGAAATCACTAGGTCATACACTTATATTATTATTTTCTGCAGAGTTAGCAATTCAAAATTCTTTGGGCCAAATGCAGCAAAGTCCAATATAAAAAAATGGTCCAACAAGAGAAAAGCCCAATTTCCACAATAACCCAAATTTTATCATCTTCCTCATCTGCTCAAACGACAGCCGCCACCACTGTTCCAAACCTAATTTCTTCTACCAAGTTTCTCACTCTCCACTCTTTGTTCTTGTTCTTCTCACTCAGTCCTCAACTCATGGTGATTCATTTTATAGTTATTTTGTAGTCTAAACCTTTTTTTCAACCAATCAGCGGTAACCATGCTTTGGTACTCTTGGTTCGCTGGTTTGTGCGTACCAATACGCCGAAGTACCCAAATTTGGTACTCACGTACCAATTCGCAATTCTCCCTTGATTACACGAATTATGTGACTATGGATTAAATCACCTATCGCTCATCTATTAACAGTAGTCTTTTTTCTTATTGCAACGTAATTATCTTTATAGGAAACAAGATATCGTTTACGCTTTTTGGATTTGATATTGAATTCAGAGATTCGAGAAATATTCAAAACTAGAAGTAATATCATTTCTTACATCCGAAGATTCCTTGCTGGCCTTCATTTCATGGAGGTTTGCTCTCTGTCCAAATATTCTGATGCCAGTTGCTTATAATATCTTCCATTCCCTTTAACTATTCTTTTAACTACTTTCAGGTTGAAACACCTATGATGAACACGATTGCCGGTGGAGCAGCAGCTCGCCCATTTGTAACTCACCACAATGAACTTGACTTGAAGTTATTCATGAGAATTGCTCCAGAACTTTATCTCAAGCAGCTGGTTGTTGGTGGGATGGAACGTGTTTATGAAATTGGTAAACAATTTAGAAATGAGGGTATAGACATGACACACAATCCTGAGTTCACTACATGTGAGTTTTATATGGCTTACATGGACTATGATGACCTAATGAAGATAACAGAGAAAATGTTGAGTGGTAAGAATTATTAAGGCCTATTGATTGCTATATTTGATTTTATCTTCTTCAGGCCATGTTATTCATTATGTGGCAAATTTCAAATAGGTATGGTTCACGAACTCACAAAGGGAAGCTATAAAATCAAATATCATGCAAATGGGGTTGATAAAGATCCTATTGAAATAGACTTCACTCCACCCTTCAGGTGCAGTGCATGCAAATTTGTCACTCATCAACTGTGATTATAAAATCTGTTGTATTTTGGCATGACTCATTTGTATTTTTAATTTTACAGGAGGATTGATATGATTGAGAAACTAGAGAGTATGGCAGGACTTACTATTCCCAAGGACTTGGCCAGTGAGGAAGCTAATCAATATCTGAAGAATGCATGCTTGAAGTTTGACATCAAATGCGCTCCCCCTCAAACCACTGCTCGGTTGTTGGATAAAGTAATGTACAATCTGTTTCTTTGTTGGCCTATAATATGCTTTGTTTTCAAATTTTTGTTCTTATTCAAAAAAAGGTTGTAACCTCTTTTCAAATTTTAGCAAAAAATTTTGTTGGCATGGTTTGCAGTTGCTCAACAGATATTAAACATAAAAAAAAGTTCAGAAATTGGATGAAAATGTGATCTGATCTGCTTTGCATAGAAATATGGGACATTCTTAACTCACAATATTAGTCATTTGATTAATAAGCTGTGGTTAATGATTCTAAGTTTGGTCACATTGCAGCTTGTAGGCCACTTTTTGGAAGAAACATGTGTCAATCCTACATTCATCATAAATCATCCCGAGATCATGAGTCCTTTGGCAAAGTGGCACAGATTAAAACCAGGCCTGACCGAACGTTTTGAATTGTTCGTGAATAAGCATGAAGTAAGTTAATGAAACTCAGGTGATTATTATTAAAAGCAAGTTAACAACGTTTTTATTCTTGTCACTGTTTTTCTGTTAATTTTCAGCTTTGCAATGCATATACTGAATTGAATGATCCAGTAGTGCAACGTCAGAGATTTGCTGAACAACTCAAGGTATGATGTAAAGATTCGCGTACTAAATTAATTCTGCGCTCTCATTGTTTGATATTGTTTTTAAGATATAGTGACTATGTAATGTTTTTTTTTTCATTTGCATCCAAACAAATCGTTATATGATATCACTTTTGCTATTTTAGTTCTAAAACAATTTCCAAAAATATTTATACGTTGTGATTAGATGCATGCGTAAAAAAATTGTATACTTACAATGCATGTAAGTTAGGATTTAATATGTATACACCGGCAGTTTTAATAACGGGTTGGTTTATGTTTTCGTGCATGTCAGGATCGACAATCAGGTGATGATGAAGCAATGGCCTTGGATGAAGGTTTTTGTACTGCTCTGGAGTATGGTTTGCCGCCAACTGGTGGTTGGGGTTTGGGCATTGATCGGTTGACAATGATACTGACTGATTCACAGAATATCAAGGTTCTTGCTCTTTCTCATTCTTTCGTGTTCAATTTTGTGTTTGTAAATTCTTACATTCTTGGTTCCTTTTGGGTTACAGGAAGTTCTTCTCTTCCCTGCTATGAAACCTCAAGATGTACCTTCTTTTCATTGA
Protein sequence

>MS.gene063054.t1

MEEATSSEPKPPATADTAAARPKRRPASADEDIIDPKQYTETRLSYLASQKTKGNNPYPHKFSVSMTILQYIDTYQGLSNGEHLEDVSVSLAGRIMNKDSSDAKLVFYDLKGGVKVIADARISDLDEVEFCKFHSTVERGDTVGVIGFPGKSEEGELSIFPKTFTVLSHCLHFIPNQKSAAAAANNANLTRNLWVPGSTRNPETYILKDQETRYRLRHLDLILNSDIQEIFHTRNKIISYIQRHLDDLDFMEVETPMMNKIAGGAAARPFVTHHNDLDMKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEDIDLTHNPEFTTCEFYMAYNDYDDLMAITEKMLSGLVQELTNGSYKIKYHANGVDKDPIEIDFTPPFRRIYMIEELESMSGLSIPKDLASEEANQYLRNACLKYDIKCAPPQTTARLLDKLVGHFLEETCINPTFIINHPEIMSPLAKWHRLKPGLTERFELIVNKLKLCNAYTELNDPVVQRQRFAEQLKDRQLGDDEAMLLDETYITALEYGLPPTGGWGLGIDRLTMILTDSQNIKEVLLFPAMKPQDVPSIKEAISSKPTSLETTKSVSSALTSERDRQAAEIQPAGPNRPAAADEDMDPKEYRENRLKYLAALKTEGINPYPHKFSVSMPIVQYIDRYGGLSNGEHLEDVSISLAGRIMHKRKSGKKLFFYDLHGGAFKVQVMADVRKSDLNEVEFGKFHSNVKRGDIVGVTGFPGKSKTGELSIFPKTFIVLSHCLHLMPNQKSAAAANNANLMGNQWVPGSTRSPEKYILKDQETRYRLRFLDLILNSEIREIFKTRSNIISYIRRFLAGLHFMEVETPMMNTIAGGAAARPFVTHHNELDLKLFMRIAPELYLKQLVVGGMERVYEIGKQFRNEGIDMTHNPEFTTCEFYMAYMDYDDLMKITEKMLSGMVHELTKGSYKIKYHANGVDKDPIEIDFTPPFRRIDMIEKLESMAGLTIPKDLASEEANQYLKNACLKFDIKCAPPQTTARLLDKLVGHFLEETCVNPTFIINHPEIMSPLAKWHRLKPGLTERFELFVNKHELCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDEGFCTALEYGLPPTGGWGLGIDRLTMILTDSQNIKEVLLFPAMKPQDVPSFH