Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063313.t1 | XP_013453188.1 | 98 | 496 | 10 | 0 | 1 | 496 | 1 | 496 | 1.10E-261 | 912.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063313.t1 | Q42525 | 70.9 | 468 | 136 | 0 | 24 | 491 | 26 | 493 | 2.2e-194 | 679.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063313.t1 | A0A072UCM8 | 98.0 | 496 | 10 | 0 | 1 | 496 | 1 | 496 | 7.9e-262 | 912.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059545 | MS.gene063313 | 0.892062 | 2.24E-74 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063313.t1 | MTR_6g088795 | 98.185 | 496 | 9 | 0 | 1 | 496 | 1 | 496 | 0.0 | 986 |
| MS.gene063313.t1 | MTR_8g102460 | 78.326 | 466 | 101 | 0 | 31 | 496 | 33 | 498 | 0.0 | 764 |
| MS.gene063313.t1 | MTR_8g014530 | 67.546 | 493 | 157 | 2 | 1 | 491 | 1 | 492 | 0.0 | 677 |
| MS.gene063313.t1 | MTR_8g102460 | 81.267 | 363 | 68 | 0 | 134 | 496 | 1 | 363 | 0.0 | 621 |
| MS.gene063313.t1 | MTR_8g102460 | 77.778 | 324 | 72 | 0 | 31 | 354 | 33 | 356 | 0.0 | 533 |
| MS.gene063313.t1 | MTR_1g025140 | 55.727 | 454 | 199 | 2 | 37 | 490 | 41 | 492 | 1.01e-174 | 501 |
| MS.gene063313.t1 | MTR_5g009000 | 52.891 | 467 | 208 | 3 | 31 | 488 | 33 | 496 | 3.93e-167 | 481 |
| MS.gene063313.t1 | MTR_1g025140 | 58.480 | 342 | 141 | 1 | 37 | 378 | 41 | 381 | 3.14e-137 | 401 |
| MS.gene063313.t1 | MTR_4g097900 | 44.853 | 272 | 112 | 3 | 220 | 491 | 1 | 234 | 8.96e-71 | 225 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063313.t1 | AT4G29130 | 70.789 | 469 | 137 | 0 | 23 | 491 | 25 | 493 | 0.0 | 704 |
| MS.gene063313.t1 | AT2G19860 | 68.710 | 473 | 148 | 0 | 23 | 495 | 25 | 497 | 0.0 | 690 |
| MS.gene063313.t1 | AT2G19860 | 69.072 | 388 | 120 | 0 | 108 | 495 | 1 | 388 | 0.0 | 573 |
| MS.gene063313.t1 | AT1G47840 | 51.542 | 454 | 216 | 4 | 38 | 490 | 43 | 493 | 1.55e-158 | 459 |
| MS.gene063313.t1 | AT1G50460 | 49.785 | 466 | 221 | 4 | 31 | 486 | 33 | 495 | 6.02e-156 | 453 |
| MS.gene063313.t1 | AT3G20040 | 49.683 | 473 | 229 | 4 | 23 | 488 | 25 | 495 | 3.40e-148 | 433 |
| MS.gene063313.t1 | AT1G50460 | 49.261 | 406 | 193 | 4 | 91 | 486 | 17 | 419 | 8.78e-131 | 386 |
| MS.gene063313.t1 | AT4G37840 | 44.681 | 470 | 234 | 6 | 30 | 485 | 25 | 482 | 2.50e-123 | 369 |
| MS.gene063313.t1 | AT1G47840 | 55.346 | 318 | 139 | 3 | 38 | 354 | 43 | 358 | 2.57e-115 | 345 |
| MS.gene063313.t1 | AT1G50460 | 52.308 | 325 | 153 | 2 | 31 | 355 | 33 | 355 | 1.18e-114 | 343 |
| MS.gene063313.t1 | AT1G47845 | 46.541 | 159 | 80 | 4 | 257 | 412 | 18 | 174 | 1.61e-36 | 134 |
Find 140 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATTTCTGGTATGTATT+TGG | 0.112308 | 6.1:-78207930 | MS.gene063313:CDS |
| AGCTTCTCAGTCCCAATATT+TGG | 0.142165 | 6.1:-78206583 | MS.gene063313:CDS |
| GGGTTTCACGTTCTCATTTC+CGG | 0.223554 | 6.1:-78209461 | MS.gene063313:CDS |
| GGTACAACACCGTGCCATTT+AGG | 0.262160 | 6.1:+78208466 | None:intergenic |
| GTCCTCTCCCTGGAAGAAAA+AGG | 0.267221 | 6.1:-78209489 | MS.gene063313:CDS |
| CATACCATCTTTCCTGATTT+CGG | 0.276283 | 6.1:+78208445 | None:intergenic |
| ACTCTTCCACTCCCAAATAT+TGG | 0.279584 | 6.1:+78206571 | None:intergenic |
| TTTGTTGATAATCTTCCATC+TGG | 0.294263 | 6.1:-78211488 | MS.gene063313:CDS |
| ATAATTTCTGGTATGTATTT+GGG | 0.294721 | 6.1:-78207929 | MS.gene063313:CDS |
| GGCGGCTGCGGCGGCGGCGG+TGG | 0.301341 | 6.1:-78211699 | MS.gene063313:CDS |
| CGTGCCCTTCGTATCCAATT+AGG | 0.303217 | 6.1:-78209746 | MS.gene063313:CDS |
| GGTGGTGGCGGCTGCGGCGG+CGG | 0.304443 | 6.1:-78211705 | MS.gene063313:CDS |
| GCTTGATCGTATTCTGTTAG+AGG | 0.309758 | 6.1:+78208075 | None:intergenic |
| GGTGGCGGCTGCGGCGGCGG+CGG | 0.321713 | 6.1:-78211702 | MS.gene063313:CDS |
| GGCGGTGGTGGCGGCTGCGG+CGG | 0.336716 | 6.1:-78211708 | MS.gene063313:CDS |
| TGCGATATTGTTTCTGTTCG+TGG | 0.338701 | 6.1:-78206846 | MS.gene063313:CDS |
| TCCAACGACGGCTCTGGAAT+TGG | 0.339592 | 6.1:-78206621 | MS.gene063313:CDS |
| GGCTGCGGCGGCGGCGGTGG+TGG | 0.342344 | 6.1:-78211696 | MS.gene063313:CDS |
| GTAAAGAGGGGTGTGGAAAG+TGG | 0.342963 | 6.1:-78211658 | MS.gene063313:CDS |
| ATGTTAGTGCAATTCCTAAA+TGG | 0.345610 | 6.1:-78208480 | MS.gene063313:CDS |
| AATAGCAGCAGCAGCAAGGC+GGG | 0.346783 | 6.1:+78206821 | None:intergenic |
| GTCATTGCCGGTGTAATTCT+TGG | 0.356680 | 6.1:-78208532 | MS.gene063313:CDS |
| GCGATATTGTTTCTGTTCGT+GGG | 0.363859 | 6.1:-78206845 | MS.gene063313:CDS |
| TGTATTTGGGTGACATTGTA+AGG | 0.373495 | 6.1:-78207916 | MS.gene063313:CDS |
| GACATCCTGATTGCTGAATC+TGG | 0.380017 | 6.1:+78208552 | None:intergenic |
| GCTTCTCAGTCCCAATATTT+GGG | 0.384463 | 6.1:-78206582 | MS.gene063313:CDS |
| TGAGAATTCCTTTCATACTT+AGG | 0.384705 | 6.1:-78207832 | MS.gene063313:intron |
| GGTGGCGGTGGTGGCGGCTG+CGG | 0.384956 | 6.1:-78211711 | MS.gene063313:CDS |
| GGGAGAGGACGAAACTCTTC+AGG | 0.386617 | 6.1:+78209502 | None:intergenic |
| TATCTCTTCCCAATTTCCTT+AGG | 0.389272 | 6.1:+78206790 | None:intergenic |
| CTCTTCCACTCCCAAATATT+GGG | 0.395121 | 6.1:+78206572 | None:intergenic |
| TGTTGAAATGCAAAATGGTT+TGG | 0.397420 | 6.1:-78211549 | MS.gene063313:CDS |
| CACGGTGTTGTACCGAAATC+AGG | 0.400642 | 6.1:-78208457 | MS.gene063313:CDS |
| GAACATTCCAACGACGGCTC+TGG | 0.410210 | 6.1:-78206627 | MS.gene063313:CDS |
| GCCGGTGTAATTCTTGGTAC+TGG | 0.417324 | 6.1:-78208526 | MS.gene063313:CDS |
| GCGGCGGCGGCGGTGGTGGT+AGG | 0.423366 | 6.1:-78211692 | MS.gene063313:CDS |
| TTTGGCATCCTAAGGAAATT+GGG | 0.423884 | 6.1:-78206798 | MS.gene063313:CDS |
| ATAGGTTATAAACATGGAAT+GGG | 0.427701 | 6.1:-78208121 | MS.gene063313:intron |
| AGGAGGAATTGAAACTTCTT+CGG | 0.427820 | 6.1:+78209691 | None:intergenic |
| ATGGTTGTTGAAATGCAAAA+TGG | 0.429549 | 6.1:-78211554 | MS.gene063313:CDS |
| AGCAATCAGGATGTCATTGC+CGG | 0.443038 | 6.1:-78208544 | MS.gene063313:CDS |
| AGCTACGGTGGCGGTGGTGG+CGG | 0.443924 | 6.1:-78211717 | MS.gene063313:CDS |
| ATAACCATTACCTGTTCTCC+AGG | 0.445092 | 6.1:+78208030 | None:intergenic |
| AGTAGCTACGGTGGCGGTGG+TGG | 0.446361 | 6.1:-78211720 | MS.gene063313:CDS |
| GAGCTTAAACCCTGGAGAAC+AGG | 0.450464 | 6.1:-78208040 | MS.gene063313:intron |
| GAGGAGATATTGAAGGTGTT+TGG | 0.451346 | 6.1:-78211626 | MS.gene063313:CDS |
| TAAAGCCAGATTCAGCAATC+AGG | 0.452297 | 6.1:-78208557 | MS.gene063313:CDS |
| TAAAGAGGGGTGTGGAAAGT+GGG | 0.456309 | 6.1:-78211657 | MS.gene063313:CDS |
| TATAGGTTATAAACATGGAA+TGG | 0.464247 | 6.1:-78208122 | MS.gene063313:intron |
| GAGCTGTCACGCGCATCTGC+AGG | 0.466152 | 6.1:+78208804 | None:intergenic |
| AGGCAGACATCAATTGCATC+CGG | 0.475640 | 6.1:-78209436 | MS.gene063313:CDS |
| GCAATTGATGTCTGCCTCAC+CGG | 0.476515 | 6.1:+78209442 | None:intergenic |
| GAGTACACTAAGGGAGTTGT+TGG | 0.480576 | 6.1:-78206679 | MS.gene063313:CDS |
| ATTCCTCCTCATTTGATGAC+CGG | 0.481221 | 6.1:-78209677 | MS.gene063313:CDS |
| GAAGAGATACGGAAAAGGCC+GGG | 0.483360 | 6.1:-78206776 | MS.gene063313:CDS |
| CGATACATCTTCAGATCTAA+AGG | 0.490893 | 6.1:-78207156 | MS.gene063313:CDS |
| CGCCACCGTAGCTACTATCT+TGG | 0.493817 | 6.1:+78211727 | None:intergenic |
| GAAGAGTTTCGTCCTCTCCC+TGG | 0.496420 | 6.1:-78209499 | MS.gene063313:CDS |
| CAGACTTACATGTGAAGAAC+CGG | 0.497553 | 6.1:+78209658 | None:intergenic |
| ACTCCACTTTATTAGAGTCC+CGG | 0.498137 | 6.1:+78209417 | None:intergenic |
| GGAAGAGATACGGAAAAGGC+CGG | 0.498955 | 6.1:-78206777 | MS.gene063313:CDS |
| AGGTTTCAATATTGAGGATG+TGG | 0.499732 | 6.1:-78209392 | MS.gene063313:intron |
| GAGTAAAGGTTTCAATATTG+AGG | 0.503775 | 6.1:-78209398 | MS.gene063313:CDS |
| GATGAAGCATCCGGGACAAT+CGG | 0.507054 | 6.1:-78206654 | MS.gene063313:CDS |
| AAGAGATACGGAAAAGGCCG+GGG | 0.509409 | 6.1:-78206775 | MS.gene063313:CDS |
| TGGTGAACTAACCAAGTCCT+TGG | 0.511360 | 6.1:-78208837 | MS.gene063313:CDS |
| TGGAAAGTGGGAAAAGGTTG+AGG | 0.517690 | 6.1:-78211645 | MS.gene063313:CDS |
| TTGTTGGGAGATGAAGCATC+CGG | 0.517867 | 6.1:-78206663 | MS.gene063313:CDS |
| AAGGAAATTGGGAAGAGATA+CGG | 0.519669 | 6.1:-78206787 | MS.gene063313:CDS |
| GGGGTGTGGAAAGTGGGAAA+AGG | 0.520221 | 6.1:-78211651 | MS.gene063313:CDS |
| TTGTTGATAATCTTCCATCT+GGG | 0.524059 | 6.1:-78211487 | MS.gene063313:intron |
| ATTATTTATAGGGATGAGAA+AGG | 0.529398 | 6.1:-78209806 | MS.gene063313:intron |
| GATGCGGCGAGCTTAAACCC+TGG | 0.532998 | 6.1:-78208048 | MS.gene063313:CDS |
| ACTCTAATAAAGTGGAGTAA+AGG | 0.533366 | 6.1:-78209412 | MS.gene063313:CDS |
| GGCTTTAGCTACTGTTCCAA+CGG | 0.533554 | 6.1:+78208573 | None:intergenic |
| TGATGCATAGCAGACATGTC+AGG | 0.534330 | 6.1:+78207179 | None:intergenic |
| TCTTCAGATCTAAAGGTGGT+TGG | 0.537048 | 6.1:-78207149 | MS.gene063313:CDS |
| GGACAGCAAAGGAGTAAAGA+GGG | 0.538444 | 6.1:-78211671 | MS.gene063313:CDS |
| CATCCGGGACTCTAATAAAG+TGG | 0.545490 | 6.1:-78209420 | MS.gene063313:CDS |
| CAATTAGGTGGAAAAGAGAA+AGG | 0.549650 | 6.1:-78209731 | MS.gene063313:CDS |
| TTCCACCTAATTGGATACGA+AGG | 0.550973 | 6.1:+78209741 | None:intergenic |
| GATAGTAGCTACGGTGGCGG+TGG | 0.554110 | 6.1:-78211723 | MS.gene063313:CDS |
| TGTACCGAAATCAGGAAAGA+TGG | 0.555989 | 6.1:-78208449 | MS.gene063313:intron |
| TCCACCTAATTGGATACGAA+GGG | 0.557329 | 6.1:+78209742 | None:intergenic |
| AGGACAGCAAAGGAGTAAAG+AGG | 0.557844 | 6.1:-78211672 | MS.gene063313:CDS |
| AAAATTGAAGGATATATTGG+AGG | 0.557932 | 6.1:-78207123 | MS.gene063313:intron |
| TCAGTCCCAATATTTGGGAG+TGG | 0.559079 | 6.1:-78206577 | MS.gene063313:CDS |
| CGCGAAATTCAGAACATGCA+TGG | 0.559310 | 6.1:-78206703 | MS.gene063313:CDS |
| AAAGGTTGAGGAGATATTGA+AGG | 0.560489 | 6.1:-78211633 | MS.gene063313:CDS |
| CGATATTGTTTCTGTTCGTG+GGG | 0.566794 | 6.1:-78206844 | MS.gene063313:CDS |
| GGACTGAGAAGCTGCAAGGA+GGG | 0.568050 | 6.1:+78206593 | None:intergenic |
| AAGGAGAGTACTACTGAAGA+TGG | 0.568422 | 6.1:-78207897 | MS.gene063313:CDS |
| TCATCATACCTAAGTATGAA+AGG | 0.568524 | 6.1:+78207824 | None:intergenic |
| TATGAAAGGAATTCTCAACT+TGG | 0.570144 | 6.1:+78207838 | None:intergenic |
| AGTACACTAAGGGAGTTGTT+GGG | 0.576154 | 6.1:-78206678 | MS.gene063313:CDS |
| AGCAAAGAGAATAACCCAGA+TGG | 0.576188 | 6.1:+78211473 | None:intergenic |
| GAAGAGTGTTGCTGAAGCTA+TGG | 0.578537 | 6.1:-78211573 | MS.gene063313:CDS |
| ATGTTCGATTCCGATTGTCC+CGG | 0.583578 | 6.1:+78206644 | None:intergenic |
| ATGAAAGGAATTCTCAACTT+GGG | 0.584176 | 6.1:+78207839 | None:intergenic |
| TAGGTCGGAGAAGATATAGT+TGG | 0.584505 | 6.1:-78208857 | MS.gene063313:CDS |
| TGTTGGGAGATGAAGCATCC+GGG | 0.586853 | 6.1:-78206662 | MS.gene063313:CDS |
| AAATCAGTGATAGCATTGGA+TGG | 0.591545 | 6.1:-78206744 | MS.gene063313:CDS |
| GCCCTTCGTATCCAATTAGG+TGG | 0.595528 | 6.1:-78209743 | MS.gene063313:CDS |
| AAAAGTGAGGAAGATTGTTG+TGG | 0.601065 | 6.1:-78206874 | MS.gene063313:CDS |
| CACGGAAGTTTGTGCCACCA+AGG | 0.603925 | 6.1:+78209765 | None:intergenic |
| TCCAATTCCAGAGCCGTCGT+TGG | 0.604490 | 6.1:+78206620 | None:intergenic |
| GAAGAACCGGTCATCAAATG+AGG | 0.604505 | 6.1:+78209671 | None:intergenic |
| CATGCATGGAGAGTACACTA+AGG | 0.606091 | 6.1:-78206689 | MS.gene063313:CDS |
| TAACCATTACCTGTTCTCCA+GGG | 0.606985 | 6.1:+78208031 | None:intergenic |
| CAAAGGAGTAAAGAGGGGTG+TGG | 0.608663 | 6.1:-78211665 | MS.gene063313:CDS |
| ATTGGGAAGAGATACGGAAA+AGG | 0.608848 | 6.1:-78206781 | MS.gene063313:CDS |
| GGCAGACATCAATTGCATCC+GGG | 0.612169 | 6.1:-78209435 | MS.gene063313:CDS |
| CAAAATGGTTTGGAGAATGA+AGG | 0.613258 | 6.1:-78211539 | MS.gene063313:CDS |
| CGGTGGTGGTAGGACAGCAA+AGG | 0.618231 | 6.1:-78211682 | MS.gene063313:CDS |
| TCCAGTACCAAGAATTACAC+CGG | 0.619382 | 6.1:+78208525 | None:intergenic |
| AATGGCCAAGATAGTAGCTA+CGG | 0.620734 | 6.1:-78211732 | MS.gene063313:CDS |
| CAAGATAGTAGCTACGGTGG+CGG | 0.623655 | 6.1:-78211726 | MS.gene063313:CDS |
| AAATAGCAGCAGCAGCAAGG+CGG | 0.626042 | 6.1:+78206820 | None:intergenic |
| ACTTCTATAGGTTATAAACA+TGG | 0.633077 | 6.1:-78208127 | MS.gene063313:intron |
| ATGTAGATTAACGACACCGT+TGG | 0.633722 | 6.1:-78208589 | MS.gene063313:intron |
| AAAGGAATTCTCAACTTGGG+AGG | 0.634267 | 6.1:+78207842 | None:intergenic |
| TTAGAGGAAGATGCGAGGAA+CGG | 0.635609 | 6.1:+78208091 | None:intergenic |
| ATTGGGACTGAGAAGCTGCA+AGG | 0.639823 | 6.1:+78206589 | None:intergenic |
| TCACGTTCTCATTTCCGGTG+AGG | 0.639881 | 6.1:-78209456 | MS.gene063313:CDS |
| GAACCGGTCATCAAATGAGG+AGG | 0.648083 | 6.1:+78209674 | None:intergenic |
| AATGGTTTGGAGAATGAAGG+TGG | 0.654227 | 6.1:-78211536 | MS.gene063313:CDS |
| AGTGCAATTCCTAAATGGCA+CGG | 0.654895 | 6.1:-78208475 | MS.gene063313:CDS |
| GACAGCAAAGGAGTAAAGAG+GGG | 0.655437 | 6.1:-78211670 | MS.gene063313:CDS |
| CTAATTGGATACGAAGGGCA+CGG | 0.658298 | 6.1:+78209747 | None:intergenic |
| AGATGGAAGATTATCAACAA+AGG | 0.662452 | 6.1:+78211490 | None:intergenic |
| ATAACACACCCCTAAAAGTG+AGG | 0.664801 | 6.1:-78206887 | MS.gene063313:CDS |
| ATGCATGGAGAGTACACTAA+GGG | 0.666874 | 6.1:-78206688 | MS.gene063313:CDS |
| GGCCAAGATAGTAGCTACGG+TGG | 0.672952 | 6.1:-78211729 | MS.gene063313:CDS |
| TAGGTTATAAACATGGAATG+GGG | 0.677198 | 6.1:-78208120 | MS.gene063313:CDS |
| TCAGTGATAGCATTGGATGG+AGG | 0.680482 | 6.1:-78206741 | MS.gene063313:CDS |
| TTCTGTTAGAGGAAGATGCG+AGG | 0.686859 | 6.1:+78208086 | None:intergenic |
| GGGACTGAGAAGCTGCAAGG+AGG | 0.687192 | 6.1:+78206592 | None:intergenic |
| TACATCTTCAGATCTAAAGG+TGG | 0.692971 | 6.1:-78207153 | MS.gene063313:CDS |
| ATACGATCAAGCTCTAGATG+CGG | 0.693760 | 6.1:-78208064 | MS.gene063313:CDS |
| GGAATCGAACATTCCAACGA+CGG | 0.711066 | 6.1:-78206633 | MS.gene063313:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAATACTCAAAA+AGG | + | chr6.1:78208460-78208479 | None:intergenic | 10.0% |
| !! | TATTATAATACTAACATAAA+TGG | + | chr6.1:78209128-78209147 | None:intergenic | 10.0% |
| !!! | ATAAAAAAAAAATGATTTTG+GGG | - | chr6.1:78208299-78208318 | MS.gene063313:intron | 10.0% |
| !!! | ATATTAAATTTTATTTGCAT+CGG | - | chr6.1:78208953-78208972 | MS.gene063313:intron | 10.0% |
| !!! | TATTTTTTTTTTTAACTTTG+TGG | - | chr6.1:78208467-78208486 | MS.gene063313:CDS | 10.0% |
| !!! | TTTTTTGAATTAGATATAAA+AGG | - | chr6.1:78211271-78211290 | MS.gene063313:intron | 10.0% |
| !! | AAAAAAATTGAAGGATATAT+TGG | - | chr6.1:78211171-78211190 | MS.gene063313:intron | 15.0% |
| !! | AAAATAAAAAACAAGAATGA+TGG | + | chr6.1:78211032-78211051 | None:intergenic | 15.0% |
| !! | TATTAAAACAAACTAATTTG+AGG | - | chr6.1:78210985-78211004 | MS.gene063313:intron | 15.0% |
| !!! | AAATTTGTGTTTTTTGTTTT+TGG | - | chr6.1:78207577-78207596 | MS.gene063313:intron | 15.0% |
| !!! | AATTTTCACATCTTTTTTTA+TGG | - | chr6.1:78211082-78211101 | MS.gene063313:intron | 15.0% |
| !!! | ATTAACATTTTGCAATTTTA+GGG | - | chr6.1:78210037-78210056 | MS.gene063313:intron | 15.0% |
| !!! | ATTTTCACATCTTTTTTTAT+GGG | - | chr6.1:78211083-78211102 | MS.gene063313:intron | 15.0% |
| !!! | GAAATAATTAACATGTTTTA+GGG | + | chr6.1:78208714-78208733 | None:intergenic | 15.0% |
| !!! | TGAAATAATTAACATGTTTT+AGG | + | chr6.1:78208715-78208734 | None:intergenic | 15.0% |
| !!! | TTTGTTTATGTTTATGTTTT+TGG | - | chr6.1:78206939-78206958 | MS.gene063313:intron | 15.0% |
| !!! | TTTGTTTTTGTTTTTGTTTT+GGG | - | chr6.1:78207338-78207357 | MS.gene063313:intron | 15.0% |
| !! | AAAATTAATACGAACTAAGT+TGG | - | chr6.1:78208172-78208191 | MS.gene063313:intron | 20.0% |
| !! | AACAAAAAACACAAATTTCT+AGG | + | chr6.1:78207575-78207594 | None:intergenic | 20.0% |
| !! | AATAAAAAATCTTTGTTCTC+AGG | + | chr6.1:78207809-78207828 | None:intergenic | 20.0% |
| !! | AATTAGAATGACAATGAATA+GGG | + | chr6.1:78209370-78209389 | None:intergenic | 20.0% |
| !! | AATTTAAGAACTCTATAACA+AGG | + | chr6.1:78207179-78207198 | None:intergenic | 20.0% |
| !! | ATAAAAAATCTTTGTTCTCA+GGG | + | chr6.1:78207808-78207827 | None:intergenic | 20.0% |
| !! | ATACAAATGAAGAAAAGAAA+AGG | + | chr6.1:78210610-78210629 | None:intergenic | 20.0% |
| !! | CTGAATATTATTACTTCTAT+AGG | - | chr6.1:78210158-78210177 | MS.gene063313:intron | 20.0% |
| !! | GAAAATATGAATATACTTGT+TGG | - | chr6.1:78211221-78211240 | MS.gene063313:intron | 20.0% |
| !! | GTTAATTATTTCATTACTAC+AGG | - | chr6.1:78208722-78208741 | MS.gene063313:intron | 20.0% |
| !! | TGATCTAAATACGATAAATT+AGG | + | chr6.1:78210685-78210704 | None:intergenic | 20.0% |
| !! | TTATCAATCTAAAGAAAAGA+TGG | + | chr6.1:78211394-78211413 | None:intergenic | 20.0% |
| !! | TTTGAATTAGATATAAAAGG+CGG | - | chr6.1:78211274-78211293 | MS.gene063313:intron | 20.0% |
| !!! | ATAATTTCTGGTATGTATTT+GGG | - | chr6.1:78210368-78210387 | MS.gene063313:intron | 20.0% |
| !!! | ATAATTTTTCTTCATTCAGA+AGG | + | chr6.1:78208073-78208092 | None:intergenic | 20.0% |
| !!! | ATAGTCAATGTTTTAAATCA+TGG | - | chr6.1:78207485-78207504 | MS.gene063313:intron | 20.0% |
| !!! | ATTAATAGTTTGCAAATTCA+GGG | + | chr6.1:78209968-78209987 | None:intergenic | 20.0% |
| !!! | ATTTTGCATGTTTATGTTTT+TGG | - | chr6.1:78206884-78206903 | MS.gene063313:CDS | 20.0% |
| !!! | ATTTTTGAGAAGATAATTTC+TGG | - | chr6.1:78210356-78210375 | MS.gene063313:intron | 20.0% |
| !!! | CTTTGTTTTTGTTTTTGTTT+TGG | - | chr6.1:78207337-78207356 | MS.gene063313:intron | 20.0% |
| !!! | GATTAACATTTTGCAATTTT+AGG | - | chr6.1:78210036-78210055 | MS.gene063313:intron | 20.0% |
| !!! | TAATTTTTCTTCATTCAGAA+GGG | + | chr6.1:78208072-78208091 | None:intergenic | 20.0% |
| !!! | TGTATTTTTCTTCTTTTTCT+AGG | - | chr6.1:78207721-78207740 | MS.gene063313:intron | 20.0% |
| ! | AAAACTCATAAATTTGAGAG+AGG | + | chr6.1:78207125-78207144 | None:intergenic | 25.0% |
| ! | AAAATTGAAGGATATATTGG+AGG | - | chr6.1:78211174-78211193 | MS.gene063313:intron | 25.0% |
| ! | AACTTTGTGGCATTATTTAT+AGG | - | chr6.1:78208480-78208499 | MS.gene063313:CDS | 25.0% |
| ! | ACTTCTATAGGTTATAAACA+TGG | - | chr6.1:78210170-78210189 | MS.gene063313:intron | 25.0% |
| ! | ACTTTGTGGCATTATTTATA+GGG | - | chr6.1:78208481-78208500 | MS.gene063313:CDS | 25.0% |
| ! | AGTAATTAGTTGTTAGGTTT+AGG | - | chr6.1:78207696-78207715 | MS.gene063313:intron | 25.0% |
| ! | AGTGTTAGTAATTAGTTGTT+AGG | - | chr6.1:78207690-78207709 | MS.gene063313:intron | 25.0% |
| ! | ATAGGTTATAAACATGGAAT+GGG | - | chr6.1:78210176-78210195 | MS.gene063313:intron | 25.0% |
| ! | ATCAAAACCTAACTTAATGA+TGG | - | chr6.1:78209684-78209703 | MS.gene063313:CDS | 25.0% |
| ! | ATTATTTATAGGGATGAGAA+AGG | - | chr6.1:78208491-78208510 | MS.gene063313:CDS | 25.0% |
| ! | ATTCTCAAATCCTAAGTAAT+CGG | + | chr6.1:78209565-78209584 | None:intergenic | 25.0% |
| ! | ATTGTCATTCTAATTGAATG+TGG | - | chr6.1:78209375-78209394 | MS.gene063313:intron | 25.0% |
| ! | CAATTAGAATGACAATGAAT+AGG | + | chr6.1:78209371-78209390 | None:intergenic | 25.0% |
| ! | GTAAACGTAAACTGAAATAA+CGG | - | chr6.1:78208207-78208226 | MS.gene063313:intron | 25.0% |
| ! | TAACAACTAATTACTAACAC+TGG | + | chr6.1:78207691-78207710 | None:intergenic | 25.0% |
| ! | TAATGATCATTATTGTTGGA+TGG | - | chr6.1:78207903-78207922 | MS.gene063313:CDS | 25.0% |
| ! | TATAGGTTATAAACATGGAA+TGG | - | chr6.1:78210175-78210194 | MS.gene063313:intron | 25.0% |
| ! | TCTAAATACGATAAATTAGG+AGG | + | chr6.1:78210682-78210701 | None:intergenic | 25.0% |
| ! | TCTGTAATGATCATTATTGT+TGG | - | chr6.1:78207899-78207918 | MS.gene063313:CDS | 25.0% |
| ! | TGATGGAAGATTATAAACAA+TGG | + | chr6.1:78211315-78211334 | None:intergenic | 25.0% |
| !! | ACTTTTCTGTTAACATTAAC+TGG | - | chr6.1:78208238-78208257 | MS.gene063313:intron | 25.0% |
| !! | ATATAAAAGGCGGTAAATTT+TGG | - | chr6.1:78211284-78211303 | MS.gene063313:intron | 25.0% |
| !! | ATCTATAGTTGCTTTAAACA+CGG | - | chr6.1:78210288-78210307 | MS.gene063313:intron | 25.0% |
| !! | CAGAAATTCGTAAATTCTTT+TGG | + | chr6.1:78207627-78207646 | None:intergenic | 25.0% |
| !! | GATTAATAGTTTGCAAATTC+AGG | + | chr6.1:78209969-78209988 | None:intergenic | 25.0% |
| !! | TGTTTAACTTAGTATTGAAC+AGG | + | chr6.1:78210956-78210975 | None:intergenic | 25.0% |
| !!! | CAATGTTTTAAATCATGGTA+TGG | - | chr6.1:78207490-78207509 | MS.gene063313:intron | 25.0% |
| !!! | CGAAATATTGATAATGTGAA+GGG | - | chr6.1:78210067-78210086 | MS.gene063313:intron | 25.0% |
| !!! | GAGTTTTTTGTCTATGTTTT+TGG | - | chr6.1:78207138-78207157 | MS.gene063313:CDS | 25.0% |
| !!! | GATAATTTCTGGTATGTATT+TGG | - | chr6.1:78210367-78210386 | MS.gene063313:intron | 25.0% |
| !!! | TACATTTTCAAGGACTAAAT+TGG | - | chr6.1:78210101-78210120 | MS.gene063313:intron | 25.0% |
| !!! | TCGAAATATTGATAATGTGA+AGG | - | chr6.1:78210066-78210085 | MS.gene063313:intron | 25.0% |
| !!! | TCTTTTTTTATGGGATTGAT+AGG | - | chr6.1:78211092-78211111 | MS.gene063313:intron | 25.0% |
| !!! | TGTGTTGTGTTTTTTGTTTT+TGG | - | chr6.1:78207252-78207271 | MS.gene063313:intron | 25.0% |
| AAACAACCACAGTTTAAACT+GGG | + | chr6.1:78207958-78207977 | None:intergenic | 30.0% | |
| AACACATTTCCACAATATCT+AGG | + | chr6.1:78208012-78208031 | None:intergenic | 30.0% | |
| AATCCTTAGCAACTTAAAAC+TGG | - | chr6.1:78209660-78209679 | MS.gene063313:intron | 30.0% | |
| AATGCTTATGCTATAAGAAC+CGG | + | chr6.1:78210879-78210898 | None:intergenic | 30.0% | |
| ACAAAAATCAGTGATAGCAT+TGG | - | chr6.1:78211549-78211568 | MS.gene063313:CDS | 30.0% | |
| ACATAGATACCTAGCAATTA+AGG | - | chr6.1:78209244-78209263 | MS.gene063313:intron | 30.0% | |
| ACTCTAATAAAGTGGAGTAA+AGG | - | chr6.1:78208885-78208904 | MS.gene063313:intron | 30.0% | |
| AGATGGAAGATTATCAACAA+AGG | + | chr6.1:78206810-78206829 | None:intergenic | 30.0% | |
| ATCAAGTTCATCTCTTTGTT+TGG | - | chr6.1:78209986-78210005 | MS.gene063313:intron | 30.0% | |
| ATCTAGACATGTATTCATGT+AGG | + | chr6.1:78209294-78209313 | None:intergenic | 30.0% | |
| ATGAAAGGAATTCTCAACTT+GGG | + | chr6.1:78210461-78210480 | None:intergenic | 30.0% | |
| ATGGTTGTTGAAATGCAAAA+TGG | - | chr6.1:78206743-78206762 | MS.gene063313:CDS | 30.0% | |
| ATGTTAGTGCAATTCCTAAA+TGG | - | chr6.1:78209817-78209836 | MS.gene063313:intron | 30.0% | |
| ATTGTGGAAATGTGTTAATG+TGG | - | chr6.1:78208016-78208035 | MS.gene063313:intron | 30.0% | |
| ATTTCAAAATTCTCTGGCAA+CGG | + | chr6.1:78207536-78207555 | None:intergenic | 30.0% | |
| CAAAAATCTGCAAATAACAG+TGG | + | chr6.1:78210343-78210362 | None:intergenic | 30.0% | |
| CAATCATATCCTTAATTGCT+AGG | + | chr6.1:78209256-78209275 | None:intergenic | 30.0% | |
| CAATTACCTTGTTCAATACT+TGG | - | chr6.1:78207290-78207309 | MS.gene063313:intron | 30.0% | |
| CGTATTTAGATCATCTTCAA+TGG | - | chr6.1:78210692-78210711 | MS.gene063313:intron | 30.0% | |
| CTACATTCCATCATTAAGTT+AGG | + | chr6.1:78209694-78209713 | None:intergenic | 30.0% | |
| CTTAAGTTTGCATTGAATGA+TGG | - | chr6.1:78208094-78208113 | MS.gene063313:CDS | 30.0% | |
| GAGTAAAGGTTTCAATATTG+AGG | - | chr6.1:78208899-78208918 | MS.gene063313:intron | 30.0% | |
| GTAAAGGAATTGTGAAAAGA+AGG | + | chr6.1:78209535-78209554 | None:intergenic | 30.0% | |
| TAGGTTATAAACATGGAATG+GGG | - | chr6.1:78210177-78210196 | MS.gene063313:intron | 30.0% | |
| TATGAAAGGAATTCTCAACT+TGG | + | chr6.1:78210462-78210481 | None:intergenic | 30.0% | |
| TCATCATACCTAAGTATGAA+AGG | + | chr6.1:78210476-78210495 | None:intergenic | 30.0% | |
| TGAGAATTCCTTTCATACTT+AGG | - | chr6.1:78210465-78210484 | MS.gene063313:intron | 30.0% | |
| TGAGGTTCTTAAATTCTAGT+TGG | + | chr6.1:78210771-78210790 | None:intergenic | 30.0% | |
| TGTTGAAATGCAAAATGGTT+TGG | - | chr6.1:78206748-78206767 | MS.gene063313:CDS | 30.0% | |
| TTGAAATGCACGATACAATA+TGG | - | chr6.1:78207549-78207568 | MS.gene063313:intron | 30.0% | |
| TTGCAGTGAAAATTTCTTTG+AGG | + | chr6.1:78210789-78210808 | None:intergenic | 30.0% | |
| TTTACTTGACCATGCAAAAT+TGG | - | chr6.1:78207836-78207855 | MS.gene063313:CDS | 30.0% | |
| TTTGTTTGGATCTGTATAAC+GGG | - | chr6.1:78210000-78210019 | MS.gene063313:intron | 30.0% | |
| ! | AGTATCGAATGACTAAAATG+CGG | - | chr6.1:78209200-78209219 | MS.gene063313:intron | 30.0% |
| ! | CAAACAGAATCTAAAGTGTT+AGG | + | chr6.1:78210511-78210530 | None:intergenic | 30.0% |
| ! | CATTCTAACTTAGTCCTTTT+TGG | - | chr6.1:78207601-78207620 | MS.gene063313:intron | 30.0% |
| ! | CTGAAGAAGCTGAAATTTTT+GGG | - | chr6.1:78210423-78210442 | MS.gene063313:intron | 30.0% |
| ! | CTTTGTTTGGATCTGTATAA+CGG | - | chr6.1:78209999-78210018 | MS.gene063313:intron | 30.0% |
| ! | GTAAATTCTTTTGGCCAAAA+AGG | + | chr6.1:78207618-78207637 | None:intergenic | 30.0% |
| ! | TAAAACAGACCAATTTTGCA+TGG | + | chr6.1:78207848-78207867 | None:intergenic | 30.0% |
| ! | TAAATTCTAGTTGGCATTGT+AGG | + | chr6.1:78210762-78210781 | None:intergenic | 30.0% |
| ! | TATGCTGTCTTACATTTTCA+AGG | - | chr6.1:78210091-78210110 | MS.gene063313:intron | 30.0% |
| ! | TGAAGAAGCTGAAATTTTTG+GGG | - | chr6.1:78210424-78210443 | MS.gene063313:intron | 30.0% |
| !! | AACAATCTTCCTCACTTTTA+GGG | + | chr6.1:78211422-78211441 | None:intergenic | 30.0% |
| !! | GAAATACAGTTAACTTGTGA+TGG | + | chr6.1:78211332-78211351 | None:intergenic | 30.0% |
| !! | TTGTTGATAATCTTCCATCT+GGG | - | chr6.1:78206810-78206829 | MS.gene063313:CDS | 30.0% |
| !! | TTTGTTGATAATCTTCCATC+TGG | - | chr6.1:78206809-78206828 | MS.gene063313:CDS | 30.0% |
| !!! | AGCTCAAATTTTTTGAGCTA+AGG | + | chr6.1:78207776-78207795 | None:intergenic | 30.0% |
| !!! | ATGAATTTTTTTGTGAGCAG+TGG | - | chr6.1:78210565-78210584 | MS.gene063313:intron | 30.0% |
| !!! | ATTCCAGTTTTAAGTTGCTA+AGG | + | chr6.1:78209666-78209685 | None:intergenic | 30.0% |
| AAAAGTGAGGAAGATTGTTG+TGG | - | chr6.1:78211423-78211442 | MS.gene063313:intron | 35.0% | |
| AAAGGTTGAGGAGATATTGA+AGG | - | chr6.1:78206664-78206683 | MS.gene063313:CDS | 35.0% | |
| AAGGAAATTGGGAAGAGATA+CGG | - | chr6.1:78211510-78211529 | MS.gene063313:CDS | 35.0% | |
| AATGACTAAAATGCGGGTAA+TGG | - | chr6.1:78209207-78209226 | MS.gene063313:intron | 35.0% | |
| ACTGTATTTCTCCTTTCCAA+AGG | - | chr6.1:78211342-78211361 | MS.gene063313:intron | 35.0% | |
| AGGAGGAATTGAAACTTCTT+CGG | + | chr6.1:78208609-78208628 | None:intergenic | 35.0% | |
| AGGTTTCAATATTGAGGATG+TGG | - | chr6.1:78208905-78208924 | MS.gene063313:intron | 35.0% | |
| AGTAATCGGTGAAAAGGTAA+AGG | + | chr6.1:78209551-78209570 | None:intergenic | 35.0% | |
| ATCCTAAGTAATCGGTGAAA+AGG | + | chr6.1:78209557-78209576 | None:intergenic | 35.0% | |
| ATTAAAAGAGTTGGAGGTCA+AGG | + | chr6.1:78207753-78207772 | None:intergenic | 35.0% | |
| ATTAGGAGGCAATGAAAATG+AGG | + | chr6.1:78210668-78210687 | None:intergenic | 35.0% | |
| CAAACAACCACAGTTTAAAC+TGG | + | chr6.1:78207959-78207978 | None:intergenic | 35.0% | |
| CAACAAAAAGCTTGATTCTC+AGG | + | chr6.1:78207416-78207435 | None:intergenic | 35.0% | |
| CAATTAGGTGGAAAAGAGAA+AGG | - | chr6.1:78208566-78208585 | MS.gene063313:CDS | 35.0% | |
| CATACCATCTTTCCTGATTT+CGG | + | chr6.1:78209855-78209874 | None:intergenic | 35.0% | |
| CGATACATCTTCAGATCTAA+AGG | - | chr6.1:78211141-78211160 | MS.gene063313:intron | 35.0% | |
| CTAAGGATTAAAAGAGTTGG+AGG | + | chr6.1:78207759-78207778 | None:intergenic | 35.0% | |
| CTCTTCGAAAAGAGTTTATG+TGG | + | chr6.1:78209003-78209022 | None:intergenic | 35.0% | |
| CTTTCTTCTACTCGTTCTTA+GGG | + | chr6.1:78208362-78208381 | None:intergenic | 35.0% | |
| GAGCTAAGGATTAAAAGAGT+TGG | + | chr6.1:78207762-78207781 | None:intergenic | 35.0% | |
| GGTGGTTGGAAAAAAATTGA+AGG | - | chr6.1:78211162-78211181 | MS.gene063313:intron | 35.0% | |
| GTATCGAATGACTAAAATGC+GGG | - | chr6.1:78209201-78209220 | MS.gene063313:intron | 35.0% | |
| TAAGAACGAGTAGAAGAAAG+AGG | - | chr6.1:78208362-78208381 | MS.gene063313:intron | 35.0% | |
| TACATCTTCAGATCTAAAGG+TGG | - | chr6.1:78211144-78211163 | MS.gene063313:intron | 35.0% | |
| TACTTCATTGTGATTCTGTG+TGG | - | chr6.1:78209410-78209429 | MS.gene063313:CDS | 35.0% | |
| TAGGAACTAAGCAGAATCAA+TGG | + | chr6.1:78208686-78208705 | None:intergenic | 35.0% | |
| TATCTCTTCCCAATTTCCTT+AGG | + | chr6.1:78211510-78211529 | None:intergenic | 35.0% | |
| TCGTGCATTTCAAAATTCTC+TGG | + | chr6.1:78207542-78207561 | None:intergenic | 35.0% | |
| TCTTGACTGAAATGACGTAA+AGG | + | chr6.1:78208150-78208169 | None:intergenic | 35.0% | |
| TCTTTCTTCTACTCGTTCTT+AGG | + | chr6.1:78208363-78208382 | None:intergenic | 35.0% | |
| TGAAGGATATATTGGAGGTA+TGG | - | chr6.1:78211179-78211198 | MS.gene063313:intron | 35.0% | |
| TGTATTTGGGTGACATTGTA+AGG | - | chr6.1:78210381-78210400 | MS.gene063313:intron | 35.0% | |
| TTACATGCCTCTTAGAATCA+TGG | + | chr6.1:78209926-78209945 | None:intergenic | 35.0% | |
| TTCAATGGTAGAACTCATTG+TGG | - | chr6.1:78210707-78210726 | MS.gene063313:intron | 35.0% | |
| TTTGGCATCCTAAGGAAATT+GGG | - | chr6.1:78211499-78211518 | MS.gene063313:CDS | 35.0% | |
| ! | AAATCAGTGATAGCATTGGA+TGG | - | chr6.1:78211553-78211572 | MS.gene063313:CDS | 35.0% |
| ! | CAAAATGGTTTGGAGAATGA+AGG | - | chr6.1:78206758-78206777 | MS.gene063313:CDS | 35.0% |
| ! | CAGAATCTAAAGTGTTAGGT+TGG | + | chr6.1:78210507-78210526 | None:intergenic | 35.0% |
| ! | CATTTGTTGCGAATAGGATT+TGG | - | chr6.1:78209034-78209053 | MS.gene063313:intron | 35.0% |
| ! | CTTTCTCTTTTCCACCTAAT+TGG | + | chr6.1:78208568-78208587 | None:intergenic | 35.0% |
| ! | GAAAGGTCTCTTTTATGCAT+TGG | - | chr6.1:78208508-78208527 | MS.gene063313:CDS | 35.0% |
| ! | GCTGAAGAAGCTGAAATTTT+TGG | - | chr6.1:78210422-78210441 | MS.gene063313:intron | 35.0% |
| ! | TCTCTTCATTTGTTGCGAAT+AGG | - | chr6.1:78209028-78209047 | MS.gene063313:intron | 35.0% |
| ! | TGCAAATTCAGGGATCATTT+TGG | + | chr6.1:78209958-78209977 | None:intergenic | 35.0% |
| ! | TTTTGGCATCCTAAGGAAAT+TGG | - | chr6.1:78211498-78211517 | MS.gene063313:CDS | 35.0% |
| !! | ACAATCTTCCTCACTTTTAG+GGG | + | chr6.1:78211421-78211440 | None:intergenic | 35.0% |
| !! | AGAACCGGTTCTAAAATCTT+AGG | + | chr6.1:78210864-78210883 | None:intergenic | 35.0% |
| !! | CAACAATCTTCCTCACTTTT+AGG | + | chr6.1:78211423-78211442 | None:intergenic | 35.0% |
| !! | TACCTTTTCACCGATTACTT+AGG | - | chr6.1:78209552-78209571 | MS.gene063313:CDS | 35.0% |
| !! | TGATTGCCAAGTATTGAACA+AGG | + | chr6.1:78207299-78207318 | None:intergenic | 35.0% |
| !!! | AACATGTTTTAGGGCATAGT+AGG | + | chr6.1:78208705-78208724 | None:intergenic | 35.0% |
| !!! | CACTGATTTTTGTTTATCCC+CGG | + | chr6.1:78211542-78211561 | None:intergenic | 35.0% |
| !!! | GGACTGGTTTTAAGTTCTAA+AGG | + | chr6.1:78210827-78210846 | None:intergenic | 35.0% |
| AAACCATTTGTCTGCTTGCT+TGG | + | chr6.1:78210640-78210659 | None:intergenic | 40.0% | |
| AAAGGAATTCTCAACTTGGG+AGG | + | chr6.1:78210458-78210477 | None:intergenic | 40.0% | |
| ACCAAGTCCTTGGAAAAAGT+TGG | - | chr6.1:78209470-78209489 | MS.gene063313:CDS | 40.0% | |
| ACTCCACTTTATTAGAGTCC+CGG | + | chr6.1:78208883-78208902 | None:intergenic | 40.0% | |
| ACTCTTCCACTCCCAAATAT+TGG | + | chr6.1:78211729-78211748 | None:intergenic | 40.0% | |
| AGCAAAGAGAATAACCCAGA+TGG | + | chr6.1:78206827-78206846 | None:intergenic | 40.0% | |
| AGCTTCTCAGTCCCAATATT+TGG | - | chr6.1:78211714-78211733 | MS.gene063313:CDS | 40.0% | |
| AGTACACTAAGGGAGTTGTT+GGG | - | chr6.1:78211619-78211638 | MS.gene063313:CDS | 40.0% | |
| AGTGCAATTCCTAAATGGCA+CGG | - | chr6.1:78209822-78209841 | MS.gene063313:intron | 40.0% | |
| ATAACACACCCCTAAAAGTG+AGG | - | chr6.1:78211410-78211429 | MS.gene063313:intron | 40.0% | |
| ATAACCATTACCTGTTCTCC+AGG | + | chr6.1:78210270-78210289 | None:intergenic | 40.0% | |
| ATGTAGATTAACGACACCGT+TGG | - | chr6.1:78209708-78209727 | MS.gene063313:CDS | 40.0% | |
| ATTGGGAAGAGATACGGAAA+AGG | - | chr6.1:78211516-78211535 | MS.gene063313:CDS | 40.0% | |
| CAGACTTACATGTGAAGAAC+CGG | + | chr6.1:78208642-78208661 | None:intergenic | 40.0% | |
| CCTGGAAGAAAAAGGGAATT+GGG | - | chr6.1:78208816-78208835 | MS.gene063313:CDS | 40.0% | |
| CTCTTCCACTCCCAAATATT+GGG | + | chr6.1:78211728-78211747 | None:intergenic | 40.0% | |
| GAAAACCAAACCACTTCCTT+TGG | + | chr6.1:78211361-78211380 | None:intergenic | 40.0% | |
| GAGCAGTGGAATGAAAATGA+TGG | - | chr6.1:78210579-78210598 | MS.gene063313:intron | 40.0% | |
| GCTTCTCAGTCCCAATATTT+GGG | - | chr6.1:78211715-78211734 | MS.gene063313:CDS | 40.0% | |
| GCTTGATCGTATTCTGTTAG+AGG | + | chr6.1:78210225-78210244 | None:intergenic | 40.0% | |
| GTGTTCACCATGATTCTAAG+AGG | - | chr6.1:78209916-78209935 | MS.gene063313:intron | 40.0% | |
| GTTCTTGCACTTTACACCAT+TGG | + | chr6.1:78210934-78210953 | None:intergenic | 40.0% | |
| TAAAGCCAGATTCAGCAATC+AGG | - | chr6.1:78209740-78209759 | MS.gene063313:CDS | 40.0% | |
| TAACCATTACCTGTTCTCCA+GGG | + | chr6.1:78210269-78210288 | None:intergenic | 40.0% | |
| TAGGTCGGAGAAGATATAGT+TGG | - | chr6.1:78209440-78209459 | MS.gene063313:CDS | 40.0% | |
| TCACTTCCCAGTTTAAACTG+TGG | - | chr6.1:78207949-78207968 | MS.gene063313:intron | 40.0% | |
| TCCACCTAATTGGATACGAA+GGG | + | chr6.1:78208558-78208577 | None:intergenic | 40.0% | |
| TCCAGTACCAAGAATTACAC+CGG | + | chr6.1:78209775-78209794 | None:intergenic | 40.0% | |
| TCTTCAGATCTAAAGGTGGT+TGG | - | chr6.1:78211148-78211167 | MS.gene063313:intron | 40.0% | |
| TCTTTGTTCTCAGGGAGATT+AGG | + | chr6.1:78207800-78207819 | None:intergenic | 40.0% | |
| TGTACCGAAATCAGGAAAGA+TGG | - | chr6.1:78209848-78209867 | MS.gene063313:intron | 40.0% | |
| TGTTAATGTGGCTGCAACTA+CGG | - | chr6.1:78208028-78208047 | MS.gene063313:intron | 40.0% | |
| TTACCAAGCAAGCAGACAAA+TGG | - | chr6.1:78210634-78210653 | MS.gene063313:intron | 40.0% | |
| TTCCACCTAATTGGATACGA+AGG | + | chr6.1:78208559-78208578 | None:intergenic | 40.0% | |
| TTTCTCCTTTCCAAAGGAAG+TGG | - | chr6.1:78211348-78211367 | MS.gene063313:intron | 40.0% | |
| ! | AATGGTTTGGAGAATGAAGG+TGG | - | chr6.1:78206761-78206780 | MS.gene063313:CDS | 40.0% |
| ! | ATGCATGGAGAGTACACTAA+GGG | - | chr6.1:78211609-78211628 | MS.gene063313:CDS | 40.0% |
| ! | ATTCCTCCTCATTTGATGAC+CGG | - | chr6.1:78208620-78208639 | MS.gene063313:intron | 40.0% |
| ! | CCAATTCCCTTTTTCTTCCA+GGG | + | chr6.1:78208818-78208837 | None:intergenic | 40.0% |
| ! | CTCTTTTATGCATTGGACCT+TGG | - | chr6.1:78208515-78208534 | MS.gene063313:CDS | 40.0% |
| ! | GATTCTGTGTGGTTTTCTGT+AGG | - | chr6.1:78209421-78209440 | MS.gene063313:CDS | 40.0% |
| ! | TTGGATCTGTATAACGGGAA+GGG | - | chr6.1:78210005-78210024 | MS.gene063313:intron | 40.0% |
| ! | TTTGGATCTGTATAACGGGA+AGG | - | chr6.1:78210004-78210023 | MS.gene063313:intron | 40.0% |
| ! | TTTTATGCATTGGACCTTGG+TGG | - | chr6.1:78208518-78208537 | MS.gene063313:CDS | 40.0% |
| !! | AAGGAGAGTACTACTGAAGA+TGG | - | chr6.1:78210400-78210419 | MS.gene063313:intron | 40.0% |
| !! | ATACGATCAAGCTCTAGATG+CGG | - | chr6.1:78210233-78210252 | MS.gene063313:intron | 40.0% |
| !! | CGATATTGTTTCTGTTCGTG+GGG | - | chr6.1:78211453-78211472 | MS.gene063313:intron | 40.0% |
| !! | GAGGAGATATTGAAGGTGTT+TGG | - | chr6.1:78206671-78206690 | MS.gene063313:CDS | 40.0% |
| !! | GCGATATTGTTTCTGTTCGT+GGG | - | chr6.1:78211452-78211471 | MS.gene063313:intron | 40.0% |
| !! | TGCGATATTGTTTCTGTTCG+TGG | - | chr6.1:78211451-78211470 | MS.gene063313:intron | 40.0% |
| !!! | CTGCTATTTTTGGCATCCTA+AGG | - | chr6.1:78211491-78211510 | MS.gene063313:CDS | 40.0% |
| AAACCCTGGAGAACAGGTAA+TGG | - | chr6.1:78210263-78210282 | MS.gene063313:intron | 45.0% | |
| AGCAATCAGGATGTCATTGC+CGG | - | chr6.1:78209753-78209772 | MS.gene063313:CDS | 45.0% | |
| AGGACAGCAAAGGAGTAAAG+AGG | - | chr6.1:78206625-78206644 | MS.gene063313:CDS | 45.0% | |
| AGGCAGACATCAATTGCATC+CGG | - | chr6.1:78208861-78208880 | MS.gene063313:intron | 45.0% | |
| ATGTTCGATTCCGATTGTCC+CGG | + | chr6.1:78211656-78211675 | None:intergenic | 45.0% | |
| CAAAAATAGCAGCAGCAGCA+AGG | + | chr6.1:78211483-78211502 | None:intergenic | 45.0% | |
| CATCCGGGACTCTAATAAAG+TGG | - | chr6.1:78208877-78208896 | MS.gene063313:intron | 45.0% | |
| CCCTGGAAGAAAAAGGGAAT+TGG | - | chr6.1:78208815-78208834 | MS.gene063313:CDS | 45.0% | |
| CCTTTCCAAAGGAAGTGGTT+TGG | - | chr6.1:78211353-78211372 | MS.gene063313:intron | 45.0% | |
| CGCGAAATTCAGAACATGCA+TGG | - | chr6.1:78211594-78211613 | MS.gene063313:CDS | 45.0% | |
| CTAATTGGATACGAAGGGCA+CGG | + | chr6.1:78208553-78208572 | None:intergenic | 45.0% | |
| GAAGAACCGGTCATCAAATG+AGG | + | chr6.1:78208629-78208648 | None:intergenic | 45.0% | |
| GACAGCAAAGGAGTAAAGAG+GGG | - | chr6.1:78206627-78206646 | MS.gene063313:CDS | 45.0% | |
| GACATCCTGATTGCTGAATC+TGG | + | chr6.1:78209748-78209767 | None:intergenic | 45.0% | |
| GAGTACACTAAGGGAGTTGT+TGG | - | chr6.1:78211618-78211637 | MS.gene063313:CDS | 45.0% | |
| GGAATCGAACATTCCAACGA+CGG | - | chr6.1:78211664-78211683 | MS.gene063313:CDS | 45.0% | |
| GGACAGCAAAGGAGTAAAGA+GGG | - | chr6.1:78206626-78206645 | MS.gene063313:CDS | 45.0% | |
| GGGTTTCACGTTCTCATTTC+CGG | - | chr6.1:78208836-78208855 | MS.gene063313:CDS | 45.0% | |
| GTCATTGCCGGTGTAATTCT+TGG | - | chr6.1:78209765-78209784 | MS.gene063313:CDS | 45.0% | |
| TCAGTCCCAATATTTGGGAG+TGG | - | chr6.1:78211720-78211739 | MS.gene063313:CDS | 45.0% | |
| TCCTCTCCCTGGAAGAAAAA+GGG | - | chr6.1:78208809-78208828 | MS.gene063313:CDS | 45.0% | |
| TGATGCATAGCAGACATGTC+AGG | + | chr6.1:78211121-78211140 | None:intergenic | 45.0% | |
| TGGAAAGTGGGAAAAGGTTG+AGG | - | chr6.1:78206652-78206671 | MS.gene063313:CDS | 45.0% | |
| TGGCTGCTTCTTTGAACATG+CGG | - | chr6.1:78211199-78211218 | MS.gene063313:intron | 45.0% | |
| TGGTGAACTAACCAAGTCCT+TGG | - | chr6.1:78209460-78209479 | MS.gene063313:CDS | 45.0% | |
| TTAGAGGAAGATGCGAGGAA+CGG | + | chr6.1:78210209-78210228 | None:intergenic | 45.0% | |
| TTCTGTTAGAGGAAGATGCG+AGG | + | chr6.1:78210214-78210233 | None:intergenic | 45.0% | |
| ! | CATGCATGGAGAGTACACTA+AGG | - | chr6.1:78211608-78211627 | MS.gene063313:CDS | 45.0% |
| ! | CCAAACCACTTCCTTTGGAA+AGG | + | chr6.1:78211356-78211375 | None:intergenic | 45.0% |
| ! | CCCAATTCCCTTTTTCTTCC+AGG | + | chr6.1:78208819-78208838 | None:intergenic | 45.0% |
| ! | CGTGCTGATCCTAGATATTG+TGG | - | chr6.1:78208000-78208019 | MS.gene063313:intron | 45.0% |
| ! | CTGTGTGGTTTTCTGTAGGT+CGG | - | chr6.1:78209425-78209444 | MS.gene063313:CDS | 45.0% |
| ! | GGCTTTAGCTACTGTTCCAA+CGG | + | chr6.1:78209727-78209746 | None:intergenic | 45.0% |
| ! | TAAAGAGGGGTGTGGAAAGT+GGG | - | chr6.1:78206640-78206659 | MS.gene063313:CDS | 45.0% |
| ! | TCAGTGATAGCATTGGATGG+AGG | - | chr6.1:78211556-78211575 | MS.gene063313:CDS | 45.0% |
| ! | TTGTTGGGAGATGAAGCATC+CGG | - | chr6.1:78211634-78211653 | MS.gene063313:CDS | 45.0% |
| !! | GAAGAGTGTTGCTGAAGCTA+TGG | - | chr6.1:78206724-78206743 | MS.gene063313:CDS | 45.0% |
| !! | GCCAACTTTTTCCAAGGACT+TGG | + | chr6.1:78209474-78209493 | None:intergenic | 45.0% |
| !!! | CTTGCTGCTGCTGCTATTTT+TGG | - | chr6.1:78211481-78211500 | MS.gene063313:intron | 45.0% |
| !! | AATTTAATATAAAAGAATTA+AGG | + | chr6.1:78208943-78208962 | None:intergenic | 5.0% |
| !!! | ATATAAAAAAAAAATGATTT+TGG | - | chr6.1:78208297-78208316 | MS.gene063313:intron | 5.0% |
| !!! | TATAAAAAAAAAATGATTTT+GGG | - | chr6.1:78208298-78208317 | MS.gene063313:intron | 5.0% |
| !!! | TTTTTTTTATTTTTTAAATG+TGG | - | chr6.1:78209313-78209332 | MS.gene063313:intron | 5.0% |
| AAATAGCAGCAGCAGCAAGG+CGG | + | chr6.1:78211480-78211499 | None:intergenic | 50.0% | |
| AAGAGATACGGAAAAGGCCG+GGG | - | chr6.1:78211522-78211541 | MS.gene063313:CDS | 50.0% | |
| ATTGGAGACCTCCGTAGACA+CGG | + | chr6.1:78210916-78210935 | None:intergenic | 50.0% | |
| ATTGGGACTGAGAAGCTGCA+AGG | + | chr6.1:78211711-78211730 | None:intergenic | 50.0% | |
| CAAAGGAGTAAAGAGGGGTG+TGG | - | chr6.1:78206632-78206651 | MS.gene063313:CDS | 50.0% | |
| CAAGATAGTAGCTACGGTGG+CGG | - | chr6.1:78206571-78206590 | MS.gene063313:CDS | 50.0% | |
| CGTGCCCTTCGTATCCAATT+AGG | - | chr6.1:78208551-78208570 | MS.gene063313:CDS | 50.0% | |
| GAACCGGTCATCAAATGAGG+AGG | + | chr6.1:78208626-78208645 | None:intergenic | 50.0% | |
| GAAGAGATACGGAAAAGGCC+GGG | - | chr6.1:78211521-78211540 | MS.gene063313:CDS | 50.0% | |
| GAGCTTAAACCCTGGAGAAC+AGG | - | chr6.1:78210257-78210276 | MS.gene063313:intron | 50.0% | |
| GCAATTGATGTCTGCCTCAC+CGG | + | chr6.1:78208858-78208877 | None:intergenic | 50.0% | |
| GCCCTTCGTATCCAATTAGG+TGG | - | chr6.1:78208554-78208573 | MS.gene063313:CDS | 50.0% | |
| GCCGGTGTAATTCTTGGTAC+TGG | - | chr6.1:78209771-78209790 | MS.gene063313:CDS | 50.0% | |
| GGAAGAGATACGGAAAAGGC+CGG | - | chr6.1:78211520-78211539 | MS.gene063313:CDS | 50.0% | |
| GGCAGACATCAATTGCATCC+GGG | - | chr6.1:78208862-78208881 | MS.gene063313:intron | 50.0% | |
| GTCCTCTCCCTGGAAGAAAA+AGG | - | chr6.1:78208808-78208827 | MS.gene063313:CDS | 50.0% | |
| TCACGTTCTCATTTCCGGTG+AGG | - | chr6.1:78208841-78208860 | MS.gene063313:CDS | 50.0% | |
| TTCTCTGGCAACGGCATATC+AGG | + | chr6.1:78207527-78207546 | None:intergenic | 50.0% | |
| ! | AGGTGTCAGTTTCTGAGGAC+TGG | + | chr6.1:78210843-78210862 | None:intergenic | 50.0% |
| ! | GATGAAGCATCCGGGACAAT+CGG | - | chr6.1:78211643-78211662 | MS.gene063313:CDS | 50.0% |
| ! | GTAAAGAGGGGTGTGGAAAG+TGG | - | chr6.1:78206639-78206658 | MS.gene063313:CDS | 50.0% |
| ! | TCCCTTTTTCTTCCAGGGAG+AGG | + | chr6.1:78208813-78208832 | None:intergenic | 50.0% |
| ! | TGCTTTAAACACGGCGAGCT+TGG | - | chr6.1:78210297-78210316 | MS.gene063313:intron | 50.0% |
| ! | TGTTGGGAGATGAAGCATCC+GGG | - | chr6.1:78211635-78211654 | MS.gene063313:CDS | 50.0% |
| !! | CACGGTGTTGTACCGAAATC+AGG | - | chr6.1:78209840-78209859 | MS.gene063313:intron | 50.0% |
| !! | CTGCAGGCCAACTTTTTCCA+AGG | + | chr6.1:78209480-78209499 | None:intergenic | 50.0% |
| !! | GGTACAACACCGTGCCATTT+AGG | + | chr6.1:78209834-78209853 | None:intergenic | 50.0% |
| AATAGCAGCAGCAGCAAGGC+GGG | + | chr6.1:78211479-78211498 | None:intergenic | 55.0% | |
| CACGGAAGTTTGTGCCACCA+AGG | + | chr6.1:78208535-78208554 | None:intergenic | 55.0% | |
| CGACACGACTTCCGTGTCTA+CGG | - | chr6.1:78210902-78210921 | MS.gene063313:intron | 55.0% | |
| CGCCACCGTAGCTACTATCT+TGG | + | chr6.1:78206573-78206592 | None:intergenic | 55.0% | |
| GAACATTCCAACGACGGCTC+TGG | - | chr6.1:78211670-78211689 | MS.gene063313:CDS | 55.0% | |
| GAAGAGTTTCGTCCTCTCCC+TGG | - | chr6.1:78208798-78208817 | MS.gene063313:intron | 55.0% | |
| GGACTGAGAAGCTGCAAGGA+GGG | + | chr6.1:78211707-78211726 | None:intergenic | 55.0% | |
| GGCCAAGATAGTAGCTACGG+TGG | - | chr6.1:78206568-78206587 | MS.gene063313:CDS | 55.0% | |
| GGGAGAGGACGAAACTCTTC+AGG | + | chr6.1:78208798-78208817 | None:intergenic | 55.0% | |
| GGGGTGTGGAAAGTGGGAAA+AGG | - | chr6.1:78206646-78206665 | MS.gene063313:CDS | 55.0% | |
| GTGTCTACGGAGGTCTCCAA+TGG | - | chr6.1:78210915-78210934 | MS.gene063313:intron | 55.0% | |
| TCCAATTCCAGAGCCGTCGT+TGG | + | chr6.1:78211680-78211699 | None:intergenic | 55.0% | |
| !! | TCCAACGACGGCTCTGGAAT+TGG | - | chr6.1:78211676-78211695 | MS.gene063313:CDS | 55.0% |
| CACGACTTCCGTGTCTACGG+AGG | - | chr6.1:78210905-78210924 | MS.gene063313:intron | 60.0% | |
| GATGCGGCGAGCTTAAACCC+TGG | - | chr6.1:78210249-78210268 | MS.gene063313:intron | 60.0% | |
| GGGACTGAGAAGCTGCAAGG+AGG | + | chr6.1:78211708-78211727 | None:intergenic | 60.0% | |
| ! | CGGTGGTGGTAGGACAGCAA+AGG | - | chr6.1:78206615-78206634 | MS.gene063313:CDS | 60.0% |
| ! | GATAGTAGCTACGGTGGCGG+TGG | - | chr6.1:78206574-78206593 | MS.gene063313:CDS | 60.0% |
| GAGCTGTCACGCGCATCTGC+AGG | + | chr6.1:78209496-78209515 | None:intergenic | 65.0% | |
| ! | AGTAGCTACGGTGGCGGTGG+TGG | - | chr6.1:78206577-78206596 | MS.gene063313:CDS | 65.0% |
| ! | AGCTACGGTGGCGGTGGTGG+CGG | - | chr6.1:78206580-78206599 | MS.gene063313:CDS | 70.0% |
| !!! | GGTGGCGGTGGTGGCGGCTG+CGG | - | chr6.1:78206586-78206605 | MS.gene063313:CDS | 80.0% |
| !! | GCGGCGGCGGCGGTGGTGGT+AGG | - | chr6.1:78206605-78206624 | MS.gene063313:CDS | 85.0% |
| !!! | GGCGGTGGTGGCGGCTGCGG+CGG | - | chr6.1:78206589-78206608 | MS.gene063313:CDS | 85.0% |
| !!! | GGTGGTGGCGGCTGCGGCGG+CGG | - | chr6.1:78206592-78206611 | MS.gene063313:CDS | 85.0% |
| ! | GGCTGCGGCGGCGGCGGTGG+TGG | - | chr6.1:78206601-78206620 | MS.gene063313:CDS | 90.0% |
| !! | GGTGGCGGCTGCGGCGGCGG+CGG | - | chr6.1:78206595-78206614 | MS.gene063313:CDS | 90.0% |
| ! | GGCGGCTGCGGCGGCGGCGG+TGG | - | chr6.1:78206598-78206617 | MS.gene063313:CDS | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 78206566 | 78211753 | 78206566 | ID=MS.gene063313 |
| chr6.1 | mRNA | 78206566 | 78211753 | 78206566 | ID=MS.gene063313.t1;Parent=MS.gene063313 |
| chr6.1 | exon | 78211488 | 78211753 | 78211488 | ID=MS.gene063313.t1.exon1;Parent=MS.gene063313.t1 |
| chr6.1 | CDS | 78211488 | 78211753 | 78211488 | ID=cds.MS.gene063313.t1;Parent=MS.gene063313.t1 |
| chr6.1 | exon | 78209667 | 78209817 | 78209667 | ID=MS.gene063313.t1.exon2;Parent=MS.gene063313.t1 |
| chr6.1 | CDS | 78209667 | 78209817 | 78209667 | ID=cds.MS.gene063313.t1;Parent=MS.gene063313.t1 |
| chr6.1 | exon | 78209393 | 78209575 | 78209393 | ID=MS.gene063313.t1.exon3;Parent=MS.gene063313.t1 |
| chr6.1 | CDS | 78209393 | 78209575 | 78209393 | ID=cds.MS.gene063313.t1;Parent=MS.gene063313.t1 |
| chr6.1 | exon | 78208802 | 78208876 | 78208802 | ID=MS.gene063313.t1.exon4;Parent=MS.gene063313.t1 |
| chr6.1 | CDS | 78208802 | 78208876 | 78208802 | ID=cds.MS.gene063313.t1;Parent=MS.gene063313.t1 |
| chr6.1 | exon | 78208450 | 78208605 | 78208450 | ID=MS.gene063313.t1.exon5;Parent=MS.gene063313.t1 |
| chr6.1 | CDS | 78208450 | 78208605 | 78208450 | ID=cds.MS.gene063313.t1;Parent=MS.gene063313.t1 |
| chr6.1 | exon | 78208041 | 78208139 | 78208041 | ID=MS.gene063313.t1.exon6;Parent=MS.gene063313.t1 |
| chr6.1 | CDS | 78208041 | 78208139 | 78208041 | ID=cds.MS.gene063313.t1;Parent=MS.gene063313.t1 |
| chr6.1 | exon | 78207833 | 78207963 | 78207833 | ID=MS.gene063313.t1.exon7;Parent=MS.gene063313.t1 |
| chr6.1 | CDS | 78207833 | 78207963 | 78207833 | ID=cds.MS.gene063313.t1;Parent=MS.gene063313.t1 |
| chr6.1 | exon | 78207124 | 78207205 | 78207124 | ID=MS.gene063313.t1.exon8;Parent=MS.gene063313.t1 |
| chr6.1 | CDS | 78207124 | 78207205 | 78207124 | ID=cds.MS.gene063313.t1;Parent=MS.gene063313.t1 |
| chr6.1 | exon | 78206566 | 78206913 | 78206566 | ID=MS.gene063313.t1.exon9;Parent=MS.gene063313.t1 |
| chr6.1 | CDS | 78206566 | 78206913 | 78206566 | ID=cds.MS.gene063313.t1;Parent=MS.gene063313.t1 |
| Gene Sequence |
| Protein sequence |
