Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063540.t1 | XP_013451745.1 | 91.8 | 784 | 63 | 1 | 1 | 784 | 169 | 951 | 0.00E+00 | 1398.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063540.t1 | Q9LYS2 | 60.1 | 794 | 298 | 7 | 1 | 784 | 146 | 930 | 5.1e-262 | 905.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063540.t1 | A0A072U9L8 | 91.8 | 784 | 63 | 1 | 1 | 784 | 169 | 951 | 0.0e+00 | 1398.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051719 | MS.gene063540 | 0.803439 | 3.49E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene063540 | 0.801153 | 1.03E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGATCTATAATTCAAAAT+AGG | + | 42386:5987-6006 | MS.gene063540:intergenic | 15.0% |
| !!! | ACTTAACATTTTTTTATAAG+TGG | + | 42386:5003-5022 | MS.gene063540:intergenic | 15.0% |
| !!! | ATTAAGTTGAATTATATGAT+AGG | + | 42386:5911-5930 | MS.gene063540:intergenic | 15.0% |
| !! | AATAATGAATTATGTTATCG+TGG | - | 42386:5061-5080 | MS.gene063540:intron | 20.0% |
| !! | AATGTTAAGTCTATCAAATT+CGG | - | 42386:5013-5032 | MS.gene063540:CDS | 20.0% |
| !! | AATTATAGATCAATGTTCAT+GGG | - | 42386:5993-6012 | MS.gene063540:CDS | 20.0% |
| !! | ATAAATTTAGATGTTAGACA+TGG | - | 42386:5779-5798 | MS.gene063540:CDS | 20.0% |
| !! | ATGTCGTAAAGATAATTATA+TGG | + | 42386:5442-5461 | MS.gene063540:intergenic | 20.0% |
| !! | CTTTATTAGAAAGATTGATA+TGG | + | 42386:4898-4917 | MS.gene063540:intergenic | 20.0% |
| !! | GATTCTGAATGAATTTATAT+TGG | - | 42386:4827-4846 | MS.gene063540:intron | 20.0% |
| !! | TAAATTTAGATGTTAGACAT+GGG | - | 42386:5780-5799 | MS.gene063540:CDS | 20.0% |
| !!! | AGAGTGAAAATTTTAGAAAA+AGG | - | 42386:5666-5685 | MS.gene063540:CDS | 20.0% |
| !!! | ATACGTGAAAATATTTTGTT+TGG | - | 42386:6061-6080 | MS.gene063540:CDS | 20.0% |
| ! | AACTTAACAGGAATATATCA+TGG | - | 42386:6393-6412 | MS.gene063540:CDS | 25.0% |
| ! | AAGTGGAAATCAATTAATTC+TGG | - | 42386:6860-6879 | MS.gene063540:CDS | 25.0% |
| ! | AATCTATATCTCAAAGACAA+TGG | - | 42386:4925-4944 | MS.gene063540:intron | 25.0% |
| ! | ATAAATTCATTCAGAATCAG+AGG | + | 42386:4825-4844 | MS.gene063540:intergenic | 25.0% |
| ! | ATATCTTTGATCATCCAATT+CGG | + | 42386:6089-6108 | MS.gene063540:intergenic | 25.0% |
| ! | ATCCATCGTTAGTAAAATAA+CGG | + | 42386:6369-6388 | MS.gene063540:intergenic | 25.0% |
| ! | CACAAAAATAAGGAAACAAA+GGG | + | 42386:6976-6995 | MS.gene063540:intergenic | 25.0% |
| ! | CTTTACAGTTAATGTCTAAT+GGG | - | 42386:6652-6671 | MS.gene063540:CDS | 25.0% |
| ! | GAATTATAGATCAATGTTCA+TGG | - | 42386:5992-6011 | MS.gene063540:CDS | 25.0% |
| ! | TCTTTACAGTTAATGTCTAA+TGG | - | 42386:6651-6670 | MS.gene063540:CDS | 25.0% |
| ! | TTAGATATTCTATCGTTTCT+AGG | - | 42386:4384-4403 | MS.gene063540:CDS | 25.0% |
| ! | TTATCAATGCAATACACAAT+TGG | + | 42386:5145-5164 | MS.gene063540:intergenic | 25.0% |
| ! | TTTACAGTTAATGTCTAATG+GGG | - | 42386:6653-6672 | MS.gene063540:CDS | 25.0% |
| ! | TTTCAATTGGATCTTGAATA+AGG | + | 42386:5562-5581 | MS.gene063540:intergenic | 25.0% |
| !! | AAGTAATGTTTTCACATTGT+TGG | - | 42386:5526-5545 | MS.gene063540:intron | 25.0% |
| !! | AATTAATTGATTTCCACTTG+GGG | + | 42386:6859-6878 | MS.gene063540:intergenic | 25.0% |
| !! | AGAATTAATTGATTTCCACT+TGG | + | 42386:6861-6880 | MS.gene063540:intergenic | 25.0% |
| !! | GAATGCTGATATATATCTTT+TGG | - | 42386:6249-6268 | MS.gene063540:CDS | 25.0% |
| !! | GAATTAATTGATTTCCACTT+GGG | + | 42386:6860-6879 | MS.gene063540:intergenic | 25.0% |
| AAAACATTACTTGCATTCAG+AGG | + | 42386:5518-5537 | MS.gene06354:intergenic | 30.0% | |
| AAATTTATGTTCCTCAGTGT+TGG | + | 42386:5767-5786 | MS.gene06354:intergenic | 30.0% | |
| ATGAATAACAACTTTCTGCT+CGG | + | 42386:4656-4675 | MS.gene063540:intergenic | 30.0% | |
| CAAACATGAAGGTTGTTTAT+TGG | - | 42386:4872-4891 | MS.gene063540:intron | 30.0% | |
| CATACTTGCAATATCTGAAT+CGG | - | 42386:6919-6938 | MS.gene063540:CDS | 30.0% | |
| CATGAAAGTTTCAAACATGA+AGG | - | 42386:4861-4880 | MS.gene063540:intron | 30.0% | |
| CCACAAAAATAAGGAAACAA+AGG | + | 42386:6977-6996 | MS.gene063540:intergenic | 30.0% | |
| GAGAGAGGAATTAATTTAAG+CGG | - | 42386:6184-6203 | MS.gene063540:CDS | 30.0% | |
| GATATCAAGAAACACTTCAT+AGG | - | 42386:6104-6123 | MS.gene063540:CDS | 30.0% | |
| GTTGAATCCATTGATGAAAA+CGG | - | 42386:4578-4597 | MS.gene063540:CDS | 30.0% | |
| TAACAGGAATATATCATGGA+AGG | - | 42386:6397-6416 | MS.gene063540:CDS | 30.0% | |
| TACCAAAATACAATCAAACG+CGG | + | 42386:6473-6492 | MS.gene063540:intergenic | 30.0% | |
| TCATTGAACTGACCATTTAA+AGG | + | 42386:4489-4508 | MS.gene063540:intergenic | 30.0% | |
| TCTGACAAACCACAAAAATA+AGG | + | 42386:6986-7005 | MS.gene063540:intergenic | 30.0% | |
| TGGTAAATTCATTCATCTTC+AGG | - | 42386:6488-6507 | MS.gene063540:CDS | 30.0% | |
| TTATCAAAATCTCTCTCTTG+TGG | + | 42386:4758-4777 | MS.gene063540:intergenic | 30.0% | |
| TTGAATCCATTGATGAAAAC+GGG | - | 42386:4579-4598 | MS.gene063540:CDS | 30.0% | |
| ! | ATAATTCTTTTCCGCACAAT+TGG | - | 42386:5161-5180 | MS.gene063540:CDS | 30.0% |
| ! | ATGTTTGCAGTAGTTCATTT+TGG | + | 42386:6552-6571 | MS.gene063540:intergenic | 30.0% |
| ! | GAATTTATATTGGTTGCTGA+AGG | - | 42386:4837-4856 | MS.gene063540:intron | 30.0% |
| !! | AAGAGAGAGATTTTGATAAC+AGG | - | 42386:4759-4778 | MS.gene063540:intron | 30.0% |
| !! | GGAGAAGTTTCTAAAACAAA+AGG | - | 42386:5866-5885 | MS.gene063540:CDS | 30.0% |
| !! | TATTTTGTTTGGATCCGAAT+TGG | - | 42386:6072-6091 | MS.gene063540:CDS | 30.0% |
| !!! | CCTTTGTTTCCTTATTTTTG+TGG | - | 42386:6974-6993 | MS.gene063540:CDS | 30.0% |
| !!! | TCGGATTGTTAATTTTTTCG+AGG | - | 42386:5631-5650 | MS.gene063540:CDS | 30.0% |
| ACCAAAATACAATCAAACGC+GGG | + | 42386:6472-6491 | MS.gene063540:intergenic | 35.0% | |
| AGAGGAATTAATTTAAGCGG+AGG | - | 42386:6187-6206 | MS.gene063540:CDS | 35.0% | |
| AGCCTTTATGCTCCTTTAAA+TGG | - | 42386:4474-4493 | MS.gene063540:CDS | 35.0% | |
| ATATCATGGAAGGACTGAAA+GGG | - | 42386:6407-6426 | MS.gene063540:CDS | 35.0% | |
| ATCAATGTTCATGGGAAGTT+TGG | - | 42386:6001-6020 | MS.gene063540:CDS | 35.0% | |
| ATCGTGGATGCTTATAGAAT+CGG | - | 42386:5077-5096 | MS.gene063540:intron | 35.0% | |
| CATGTTCTTCTTAATTGCAC+CGG | + | 42386:5419-5438 | MS.gene063540:intergenic | 35.0% | |
| CGATTCAGATATTGCAAGTA+TGG | + | 42386:6921-6940 | MS.gene063540:intergenic | 35.0% | |
| CTTTACGACATCATTGATGT+TGG | - | 42386:5451-5470 | MS.gene063540:intron | 35.0% | |
| GATATGTTTCTCAAACAGCA+TGG | - | 42386:6023-6042 | MS.gene063540:CDS | 35.0% | |
| GATATTGCAAAACTCATGGA+TGG | - | 42386:7004-7023 | MS.gene063540:CDS | 35.0% | |
| GGTCAAACACTCTTAACTTT+GGG | + | 42386:4635-4654 | MS.gene063540:intergenic | 35.0% | |
| GTCAGATATTGCAAAACTCA+TGG | - | 42386:7000-7019 | MS.gene063540:CDS | 35.0% | |
| TAAAGGCTTTCACCATTTAC+AGG | + | 42386:4462-4481 | MS.gene063540:intergenic | 35.0% | |
| TATATCATGGAAGGACTGAA+AGG | - | 42386:6406-6425 | MS.gene063540:CDS | 35.0% | |
| TCAATGCAATACACAATTGG+AGG | + | 42386:5142-5161 | MS.gene063540:intergenic | 35.0% | |
| TTATCGAAATCGAGTCTTTG+AGG | + | 42386:5706-5725 | MS.gene063540:intergenic | 35.0% | |
| ! | AAATTTTCACTCTGCAGTTC+TGG | + | 42386:5659-5678 | MS.gene063540:intergenic | 35.0% |
| ! | AATTTCAATGTGTCGATGTG+AGG | + | 42386:7047-7066 | MS.gene063540:intergenic | 35.0% |
| ! | AGGCAAAAGTTGCATTTTCT+CGG | - | 42386:5612-5631 | MS.gene063540:CDS | 35.0% |
| ! | AGTGTTGAAGCTATATGCAT+GGG | - | 42386:5334-5353 | MS.gene063540:CDS | 35.0% |
| ! | CGATGGATTTGAAACTTAAC+AGG | - | 42386:6381-6400 | MS.gene063540:CDS | 35.0% |
| ! | GACCATTTAAAGGAGCATAA+AGG | + | 42386:4479-4498 | MS.gene063540:intergenic | 35.0% |
| ! | TCTTTAGCAAGATCTCGTTT+TGG | - | 42386:4553-4572 | MS.gene063540:CDS | 35.0% |
| ! | TTTTGCAGTATGTGCATCAA+CGG | + | 42386:6290-6309 | MS.gene063540:intergenic | 35.0% |
| !! | AAGTGTTGAAGCTATATGCA+TGG | - | 42386:5333-5352 | MS.gene063540:CDS | 35.0% |
| !! | AGGATTCTTTGCTTTTCTCA+AGG | - | 42386:4779-4798 | MS.gene063540:intron | 35.0% |
| !! | TGCCGTTATTTTACTAACGA+TGG | - | 42386:6364-6383 | MS.gene063540:CDS | 35.0% |
| !! | TTGTGTTGTAAGTTTGCTAG+TGG | + | 42386:5242-5261 | MS.gene063540:intergenic | 35.0% |
| !!! | AAAATGTGCCGACTTTTCAT+GGG | - | 42386:5724-5743 | MS.gene063540:CDS | 35.0% |
| !!! | TAAAATGTGCCGACTTTTCA+TGG | - | 42386:5723-5742 | MS.gene063540:CDS | 35.0% |
| AAAACCGACGAATGTGATGA+TGG | + | 42386:4717-4736 | MS.gene06354:intergenic | 40.0% | |
| AACACTTCATAGGTCTTCAC+TGG | - | 42386:6114-6133 | MS.gene063540:CDS | 40.0% | |
| AAGAGGAAACACTCACAAGT+TGG | + | 42386:6773-6792 | MS.gene063540:intergenic | 40.0% | |
| ACGCTATTAGCAACGATTCT+TGG | - | 42386:5845-5864 | MS.gene063540:CDS | 40.0% | |
| AGATGTTAGACATGGGCAAA+AGG | - | 42386:5787-5806 | MS.gene063540:CDS | 40.0% | |
| AGTTATTGCAGCGATCATTC+AGG | - | 42386:5592-5611 | MS.gene063540:CDS | 40.0% | |
| ATCATTGATGTTGGCGTCAA+CGG | - | 42386:5460-5479 | MS.gene063540:intron | 40.0% | |
| ATGATCGCTGCAATAACTTC+TGG | + | 42386:5590-5609 | MS.gene063540:intergenic | 40.0% | |
| ATTTCAGTGAGGTCTCCATA+GGG | + | 42386:6160-6179 | MS.gene063540:intergenic | 40.0% | |
| CAAACAGCATGGATACAAAC+AGG | - | 42386:6034-6053 | MS.gene063540:CDS | 40.0% | |
| CAAGTTTCAAACCCAACTCA+TGG | - | 42386:5259-5278 | MS.gene063540:CDS | 40.0% | |
| CAATATCTGAATCGGACGAA+AGG | - | 42386:6927-6946 | MS.gene063540:CDS | 40.0% | |
| CCAAAATACAATCAAACGCG+GGG | + | 42386:6471-6490 | MS.gene063540:intergenic | 40.0% | |
| CGGTCAAACACTCTTAACTT+TGG | + | 42386:4636-4655 | MS.gene063540:intergenic | 40.0% | |
| CTGGAAGAAGAAAGAGAGAT+AGG | - | 42386:6879-6898 | MS.gene063540:CDS | 40.0% | |
| GAAAGAGAGATAGGAGATAC+AGG | - | 42386:6888-6907 | MS.gene063540:CDS | 40.0% | |
| GAATCGGAGAATTTCCATTC+TGG | - | 42386:5093-5112 | MS.gene063540:intron | 40.0% | |
| GTTACCTTCCCATGAAAAGT+CGG | + | 42386:5735-5754 | MS.gene063540:intergenic | 40.0% | |
| TATGGAGACCTCACTGAAAT+AGG | - | 42386:6160-6179 | MS.gene063540:CDS | 40.0% | |
| TATTTCAGTGAGGTCTCCAT+AGG | + | 42386:6161-6180 | MS.gene063540:intergenic | 40.0% | |
| TATTTCCGCAGTAGACTTGT+TGG | - | 42386:4948-4967 | MS.gene063540:CDS | 40.0% | |
| TGAACCATCATCACATTCGT+CGG | - | 42386:4710-4729 | MS.gene063540:CDS | 40.0% | |
| TGACAAGGTCTTGGAATTCT+TGG | + | 42386:6722-6741 | MS.gene063540:intergenic | 40.0% | |
| TGATCGCTGCAATAACTTCT+GGG | + | 42386:5589-5608 | MS.gene063540:intergenic | 40.0% | |
| TGTGAAGTCGATCCTGTAAA+TGG | - | 42386:4447-4466 | MS.gene063540:CDS | 40.0% | |
| ! | AAGGTACTCACACTATCTTC+TGG | - | 42386:4798-4817 | MS.gene063540:intron | 40.0% |
| ! | AATATCTAAAGCTGCCTCGA+GGG | + | 42386:4373-4392 | MS.gene063540:intergenic | 40.0% |
| ! | CGAACTCAAAGTGTTATCTC+CGG | - | 42386:5397-5416 | MS.gene063540:CDS | 40.0% |
| ! | GGGTCAAGAGAAAACACTTT+TGG | - | 42386:4599-4618 | MS.gene063540:CDS | 40.0% |
| ! | TCTTGACCCGTTTTCATCAA+TGG | + | 42386:4588-4607 | MS.gene063540:intergenic | 40.0% |
| ! | TTAGCAAGATCTCGTTTTGG+TGG | - | 42386:4556-4575 | MS.gene063540:CDS | 40.0% |
| !! | AAGAGTCCAGCTTTGGAAAA+AGG | + | 42386:4537-4556 | MS.gene063540:intergenic | 40.0% |
| !! | ACTTCTGGGAGGTTTTCAAT+TGG | + | 42386:5575-5594 | MS.gene063540:intergenic | 40.0% |
| !! | AGAGTCCAGCTTTGGAAAAA+GGG | + | 42386:4536-4555 | MS.gene063540:intergenic | 40.0% |
| !! | GAGATTAAAGGCTAGTTCTG+AGG | - | 42386:5295-5314 | MS.gene063540:CDS | 40.0% |
| !!! | CATCACATTCGTCGGTTTTA+TGG | - | 42386:4718-4737 | MS.gene063540:CDS | 40.0% |
| AAATACAATCAAACGCGGGG+AGG | + | 42386:6468-6487 | MS.gene06354:intergenic | 45.0% | |
| AACTTCCGGAAATAGTACGC+TGG | - | 42386:6809-6828 | MS.gene063540:CDS | 45.0% | |
| AAGGAGTTTATAGCCCCAAG+TGG | - | 42386:6843-6862 | MS.gene063540:CDS | 45.0% | |
| AATGGGGTAATCCTACAAGC+TGG | - | 42386:6669-6688 | MS.gene063540:CDS | 45.0% | |
| ACGCATCAAATCCAACACTG+AGG | - | 42386:5753-5772 | MS.gene063540:CDS | 45.0% | |
| ACTAGCAACACTCGCATCAT+TGG | - | 42386:5184-5203 | MS.gene063540:CDS | 45.0% | |
| AGACCTTGTCAATGCTCACA+AGG | - | 42386:6731-6750 | MS.gene063540:CDS | 45.0% | |
| CAAGTCTGGTGAAACCAGAA+TGG | + | 42386:5110-5129 | MS.gene063540:intergenic | 45.0% | |
| CGCGCAAGATGAGAGATTAA+AGG | - | 42386:5283-5302 | MS.gene063540:CDS | 45.0% | |
| CTCCATAGGGAAACAACTCA+AGG | + | 42386:6147-6166 | MS.gene063540:intergenic | 45.0% | |
| CTTGCTAAAGAGTCCAGCTT+TGG | + | 42386:4544-4563 | MS.gene063540:intergenic | 45.0% | |
| GCTAGATTGAATCACTCTGG+TGG | - | 42386:5035-5054 | MS.gene063540:intron | 45.0% | |
| GGTGATATGAACCAGCTTGT+AGG | + | 42386:6683-6702 | MS.gene063540:intergenic | 45.0% | |
| TCACTCCAACAAGTCTACTG+CGG | + | 42386:4956-4975 | MS.gene063540:intergenic | 45.0% | |
| TCATAGGTCTTCACTGGCAA+AGG | - | 42386:6120-6139 | MS.gene063540:CDS | 45.0% | |
| TCCCACAGACATTCAACTTC+CGG | - | 42386:6795-6814 | MS.gene063540:CDS | 45.0% | |
| TCCGGAAGTTGAATGTCTGT+GGG | + | 42386:6799-6818 | MS.gene063540:intergenic | 45.0% | |
| TCGGCTAGATTGAATCACTC+TGG | - | 42386:5032-5051 | MS.gene063540:intron | 45.0% | |
| TGAATGTCTGTGGGAAGAAG+AGG | + | 42386:6790-6809 | MS.gene063540:intergenic | 45.0% | |
| TGAGCCAACTTCTCCACAAA+TGG | + | 42386:5816-5835 | MS.gene063540:intergenic | 45.0% | |
| TGTGCATCAACGGCACTAAA+TGG | + | 42386:6280-6299 | MS.gene063540:intergenic | 45.0% | |
| TGTTAGACATGGGCAAAAGG+TGG | - | 42386:5790-5809 | MS.gene063540:CDS | 45.0% | |
| TTCCGGAAGTTGAATGTCTG+TGG | + | 42386:6800-6819 | MS.gene063540:intergenic | 45.0% | |
| ! | ATTTGTGGAGAAGTTGGCTC+AGG | - | 42386:5815-5834 | MS.gene063540:CDS | 45.0% |
| ! | CCCCGCGTTTGATTGTATTT+TGG | - | 42386:6468-6487 | MS.gene063540:CDS | 45.0% |
| ! | GAATATCTAAAGCTGCCTCG+AGG | + | 42386:4374-4393 | MS.gene063540:intergenic | 45.0% |
| ! | GACCTTGAGTTGTTTCCCTA+TGG | - | 42386:6142-6161 | MS.gene063540:CDS | 45.0% |
| ! | GTAACCCCTTTTTCCAAAGC+TGG | - | 42386:4528-4547 | MS.gene063540:CDS | 45.0% |
| ! | GTGTTGCTAGTCCAATTGTG+CGG | + | 42386:5175-5194 | MS.gene063540:intergenic | 45.0% |
| !! | CATTCTGGTTTCACCAGACT+TGG | - | 42386:5108-5127 | MS.gene063540:intron | 45.0% |
| !! | GAGTCCAGCTTTGGAAAAAG+GGG | + | 42386:4535-4554 | MS.gene063540:intergenic | 45.0% |
| !! | TCTCCTTGTGAGCATTGACA+AGG | + | 42386:6737-6756 | MS.gene063540:intergenic | 45.0% |
| !! | TGTGAGCATTGACAAGGTCT+TGG | + | 42386:6731-6750 | MS.gene063540:intergenic | 45.0% |
| AATGCTCACAAGGAGACTGC+TGG | - | 42386:6741-6760 | MS.gene063540:CDS | 50.0% | |
| AGCAACACTCGCATCATTGG+CGG | - | 42386:5187-5206 | MS.gene063540:CDS | 50.0% | |
| ATCTTGCGCGACCATGAGTT+GGG | + | 42386:5273-5292 | MS.gene063540:intergenic | 50.0% | |
| CTCACTGAAATAGGCGAGAG+AGG | - | 42386:6169-6188 | MS.gene063540:CDS | 50.0% | |
| CTCTCTCGCCTATTTCAGTG+AGG | + | 42386:6171-6190 | MS.gene063540:intergenic | 50.0% | |
| GCGATCCAGCGTACTATTTC+CGG | + | 42386:6817-6836 | MS.gene063540:intergenic | 50.0% | |
| GTGGCCATTTGTGGAGAAGT+TGG | - | 42386:5809-5828 | MS.gene063540:CDS | 50.0% | |
| TCGCTGCAATAACTTCTGGG+AGG | + | 42386:5586-5605 | MS.gene063540:intergenic | 50.0% | |
| ! | CTTGGCTTGAGCTCAATAGC+TGG | + | 42386:6704-6723 | MS.gene063540:intergenic | 50.0% |
| !!! | TGTGCCGACTTTTCATGGGA+AGG | - | 42386:5728-5747 | MS.gene063540:CDS | 50.0% |
| CATCTTGCGCGACCATGAGT+TGG | + | 42386:5274-5293 | MS.gene063540:intergenic | 55.0% | |
| GGGCAAAAGGTGGCCATTTG+TGG | - | 42386:5800-5819 | MS.gene063540:CDS | 55.0% | |
| !! | GGAGGCTTGTTGTCCAAGTC+TGG | + | 42386:5124-5143 | MS.gene063540:intergenic | 55.0% |
| TACGCTGGATCGCGCGTTGA+AGG | - | 42386:6824-6843 | MS.gene063540:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 42386 | gene | 4362 | 7073 | 4362 | ID=MS.gene063540 |
| 42386 | mRNA | 4362 | 7073 | 4362 | ID=MS.gene063540.t1;Parent=MS.gene063540 |
| 42386 | exon | 5543 | 7073 | 5543 | ID=MS.gene063540.t1.exon1;Parent=MS.gene063540.t1 |
| 42386 | CDS | 5543 | 7073 | 5543 | ID=cds.MS.gene063540.t1;Parent=MS.gene063540.t1 |
| 42386 | exon | 5114 | 5434 | 5114 | ID=MS.gene063540.t1.exon2;Parent=MS.gene063540.t1 |
| 42386 | CDS | 5114 | 5434 | 5114 | ID=cds.MS.gene063540.t1;Parent=MS.gene063540.t1 |
| 42386 | exon | 4946 | 5032 | 4946 | ID=MS.gene063540.t1.exon3;Parent=MS.gene063540.t1 |
| 42386 | CDS | 4946 | 5032 | 4946 | ID=cds.MS.gene063540.t1;Parent=MS.gene063540.t1 |
| 42386 | exon | 4362 | 4775 | 4362 | ID=MS.gene063540.t1.exon4;Parent=MS.gene063540.t1 |
| 42386 | CDS | 4362 | 4775 | 4362 | ID=cds.MS.gene063540.t1;Parent=MS.gene063540.t1 |
| Gene Sequence |
| Protein sequence |
