Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063849.t1 | PNX79017.1 | 33.3 | 156 | 43 | 2 | 6 | 100 | 271 | 426 | 3.70E-08 | 67.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063849.t1 | A0A2K3LKF4 | 33.3 | 156 | 43 | 2 | 6 | 100 | 271 | 426 | 2.6e-08 | 67.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058515 | MS.gene063849 | 0.819947 | 8.88E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 26 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCACAATCTTCTAGTCTTC+TGG | 0.208985 | 8.1:+62662115 | None:intergenic |
| TCAACTCCCGCCCCACAAAT+AGG | 0.222795 | 8.1:+62659614 | None:intergenic |
| TCATTATTCACTGCACTATC+AGG | 0.320762 | 8.1:+62662086 | None:intergenic |
| TTTCTTTGTGGCCTCACAAC+TGG | 0.353214 | 8.1:+62662149 | None:intergenic |
| CAACTCCCGCCCCACAAATA+GGG | 0.397486 | 8.1:+62659615 | None:intergenic |
| TCACAATCTTCTAGTCTTCT+GGG | 0.405882 | 8.1:+62662116 | None:intergenic |
| GGAGCATGCCTGTTTCTTTG+TGG | 0.412433 | 8.1:+62662137 | None:intergenic |
| TTGTGAGGCCACAAAGAAAC+AGG | 0.429294 | 8.1:-62662145 | MS.gene063849:CDS |
| GCATTGGAAGCCCTATTTGT+GGG | 0.436433 | 8.1:-62659625 | MS.gene063849:CDS |
| GGAAAGCTATCATATTTCCT+TGG | 0.453448 | 8.1:-62661348 | MS.gene063849:CDS |
| CTCAAAACATCAGGGTATCA+AGG | 0.460383 | 8.1:+62659589 | None:intergenic |
| GGAAGCCCTATTTGTGGGGC+GGG | 0.484459 | 8.1:-62659620 | MS.gene063849:CDS |
| AGCATTGGAAGCCCTATTTG+TGG | 0.501604 | 8.1:-62659626 | MS.gene063849:CDS |
| GAATTCACAACTAGCAAAGC+AGG | 0.514301 | 8.1:-62661321 | MS.gene063849:CDS |
| TACCCTCCTCAGATCCCATC+CGG | 0.514991 | 8.1:-62659660 | MS.gene063849:intron |
| CTTTGTGGCCTCACAACTGG+TGG | 0.515443 | 8.1:+62662152 | None:intergenic |
| TGGCCTCACAACTGGTGGTG+TGG | 0.516978 | 8.1:+62662157 | None:intergenic |
| CCGGTGAAAACCTCGAGCAT+TGG | 0.517915 | 8.1:-62659641 | MS.gene063849:CDS |
| ACATTGGAGAACTGCTTGAA+AGG | 0.548722 | 8.1:-62661275 | MS.gene063849:intron |
| TGGAAGCCCTATTTGTGGGG+CGG | 0.563733 | 8.1:-62659621 | MS.gene063849:CDS |
| ATGCATCAGCAGAAGTACAT+TGG | 0.565025 | 8.1:-62661291 | MS.gene063849:CDS |
| CATTGGAAGCCCTATTTGTG+GGG | 0.595519 | 8.1:-62659624 | MS.gene063849:CDS |
| TAGTTGTGAATTCAAATCCA+AGG | 0.608634 | 8.1:+62661331 | None:intergenic |
| GATAGTGCAGTGAATAATGA+AGG | 0.613092 | 8.1:-62662083 | MS.gene063849:intron |
| AAGCCACACCACCAGTTGTG+AGG | 0.631901 | 8.1:-62662160 | MS.gene063849:CDS |
| AATAGGGCTTCCAATGCTCG+AGG | 0.649870 | 8.1:+62659631 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTGATTATAATTTTTTTT+GGG | - | chr8.1:62661984-62662003 | MS.gene063849:intron | 10.0% |
| !!! | TGTTTGATTATAATTTTTTT+TGG | - | chr8.1:62661983-62662002 | MS.gene063849:intron | 10.0% |
| !!! | TTTGATTATAATTTTTTTTG+GGG | - | chr8.1:62661985-62662004 | MS.gene063849:intron | 10.0% |
| !! | AAATTGTATTCACATTATTA+TGG | + | chr8.1:62661557-62661576 | None:intergenic | 15.0% |
| !! | TTATAATCAAACAACAAAAT+AGG | + | chr8.1:62661976-62661995 | None:intergenic | 15.0% |
| !! | TAGATTAGAAACAATATGAT+TGG | - | chr8.1:62660056-62660075 | MS.gene063849:intron | 20.0% |
| !!! | TTTTGCAACATTTTTCTTTT+TGG | - | chr8.1:62661753-62661772 | MS.gene063849:intron | 20.0% |
| ! | CTAGTAAATCATCTACATAT+AGG | + | chr8.1:62660380-62660399 | None:intergenic | 25.0% |
| ! | GAAAATTCATTTGACATCTA+TGG | + | chr8.1:62659923-62659942 | None:intergenic | 25.0% |
| ! | GTGAAAGCAAACTAAAATTT+GGG | + | chr8.1:62661657-62661676 | None:intergenic | 25.0% |
| ! | TGTGAAAGCAAACTAAAATT+TGG | + | chr8.1:62661658-62661677 | None:intergenic | 25.0% |
| !! | AAATTACATAAAGCACTCTA+TGG | - | chr8.1:62660222-62660241 | MS.gene063849:intron | 25.0% |
| !! | AACTAAAATTTGGGTTTCAA+TGG | + | chr8.1:62661648-62661667 | None:intergenic | 25.0% |
| !! | AGATGTCAAATGAATTTTCA+AGG | - | chr8.1:62659924-62659943 | MS.gene063849:intron | 25.0% |
| !!! | AATTGGTTTCATCATGATTT+TGG | - | chr8.1:62662077-62662096 | MS.gene063849:intron | 25.0% |
| !!! | ATAATTTTTTTTGGGGTGTT+TGG | - | chr8.1:62661992-62662011 | MS.gene063849:intron | 25.0% |
| !!! | ATTGGTTTCATCATGATTTT+GGG | - | chr8.1:62662078-62662097 | MS.gene063849:intron | 25.0% |
| !!! | TAATTTTTTTTGGGGTGTTT+GGG | - | chr8.1:62661993-62662012 | MS.gene063849:intron | 25.0% |
| AACTATCTGTTTGAATTCAG+TGG | + | chr8.1:62660661-62660680 | None:intergenic | 30.0% | |
| AAGCAATTCAAACTGAAGTT+TGG | - | chr8.1:62659815-62659834 | MS.gene063849:intron | 30.0% | |
| ACTCATTCACTTTGCATTAT+TGG | - | chr8.1:62659765-62659784 | MS.gene063849:intron | 30.0% | |
| ACTGAATTCAAACAGATAGT+TGG | - | chr8.1:62660660-62660679 | MS.gene063849:intron | 30.0% | |
| AGAAACAATATGATTGGTAG+TGG | - | chr8.1:62660062-62660081 | MS.gene063849:intron | 30.0% | |
| AGGATATTGAGATATGTGAA+AGG | - | chr8.1:62660789-62660808 | MS.gene063849:intron | 30.0% | |
| AGTTTAGCATTTGTTTCAGA+TGG | + | chr8.1:62660606-62660625 | None:intergenic | 30.0% | |
| ATTGCTTCTTTGTAGTTTAG+AGG | + | chr8.1:62659802-62659821 | None:intergenic | 30.0% | |
| CGATCAATCAAGTCAAAAAT+AGG | + | chr8.1:62661883-62661902 | None:intergenic | 30.0% | |
| CTCATTGAATGTTAGGATTA+TGG | - | chr8.1:62661320-62661339 | MS.gene063849:CDS | 30.0% | |
| GTAAAATCTGCATTTCTGAA+TGG | - | chr8.1:62660126-62660145 | MS.gene063849:intron | 30.0% | |
| TAGTTGTGAATTCAAATCCA+AGG | + | chr8.1:62660494-62660513 | None:intergenic | 30.0% | |
| TGTTAACAGTTGGAAATAAC+AGG | + | chr8.1:62660830-62660849 | None:intergenic | 30.0% | |
| TTATACGTGAATTGATGCAT+TGG | - | chr8.1:62661913-62661932 | MS.gene063849:intron | 30.0% | |
| TTCTAAATACAAAGCCAGAT+TGG | - | chr8.1:62659972-62659991 | MS.gene063849:intron | 30.0% | |
| TTTCCAACTGTTAACAAAGA+AGG | - | chr8.1:62660834-62660853 | MS.gene063849:intron | 30.0% | |
| ! | ATCTGAAACAAATGCTAAAC+TGG | - | chr8.1:62660605-62660624 | MS.gene063849:intron | 30.0% |
| ! | CACAAGGATTTGAAGTAAAA+GGG | - | chr8.1:62660181-62660200 | MS.gene063849:intron | 30.0% |
| ! | GAGTTTGAAATGACAGATTT+GGG | - | chr8.1:62660453-62660472 | MS.gene063849:intron | 30.0% |
| ! | GTGTTTGCTAATCATGATTA+TGG | + | chr8.1:62661380-62661399 | None:intergenic | 30.0% |
| ! | GTTAGGATTATGGATTAAGA+GGG | - | chr8.1:62661330-62661349 | MS.gene063849:CDS | 30.0% |
| ! | TGAGTTTGAAATGACAGATT+TGG | - | chr8.1:62660452-62660471 | MS.gene063849:intron | 30.0% |
| ! | TGTTAGGATTATGGATTAAG+AGG | - | chr8.1:62661329-62661348 | MS.gene063849:CDS | 30.0% |
| ! | TTAGGATTATGGATTAAGAG+GGG | - | chr8.1:62661331-62661350 | MS.gene063849:CDS | 30.0% |
| !! | ATTGTTTCTAATCTAGCAAC+AGG | + | chr8.1:62660051-62660070 | None:intergenic | 30.0% |
| !! | CAACATTTTTCTTTTTGGTG+TGG | - | chr8.1:62661758-62661777 | MS.gene063849:intron | 30.0% |
| !!! | TCTTCTTTTTTGCGTTACAA+AGG | - | chr8.1:62661721-62661740 | MS.gene063849:intron | 30.0% |
| AAGGTAAAACTGAATCCTGA+TGG | - | chr8.1:62659943-62659962 | MS.gene063849:intron | 35.0% | |
| ACATACACATCTTCATCCAA+AGG | + | chr8.1:62660153-62660172 | None:intergenic | 35.0% | |
| AGAGGTTTCTTACAGAGATA+TGG | - | chr8.1:62660000-62660019 | MS.gene063849:intron | 35.0% | |
| AGGAAATGCAAAGCAGAATA+TGG | - | chr8.1:62660309-62660328 | MS.gene063849:intron | 35.0% | |
| AGGTAAAACTGAATCCTGAT+GGG | - | chr8.1:62659944-62659963 | MS.gene063849:intron | 35.0% | |
| ATGAATGCAGTAGTGAAGAA+AGG | - | chr8.1:62660628-62660647 | MS.gene063849:intron | 35.0% | |
| CAACACCATTGAACTTGAAT+AGG | + | chr8.1:62660935-62660954 | None:intergenic | 35.0% | |
| CTATTGAGAAGAATAACACC+TGG | - | chr8.1:62659866-62659885 | MS.gene063849:intron | 35.0% | |
| CTCAAAAGGAATGATTGAAG+TGG | - | chr8.1:62661208-62661227 | MS.gene063849:intron | 35.0% | |
| CTTACTGCAAAGCATATATC+TGG | + | chr8.1:62660714-62660733 | None:intergenic | 35.0% | |
| GATAGTGCAGTGAATAATGA+AGG | - | chr8.1:62659739-62659758 | MS.gene063849:intron | 35.0% | |
| GGAAAGCTATCATATTTCCT+TGG | - | chr8.1:62660474-62660493 | MS.gene063849:intron | 35.0% | |
| GTAGATGATTTACTAGTGAC+TGG | - | chr8.1:62660384-62660403 | MS.gene063849:intron | 35.0% | |
| GTGTTATCATGCAATCAAAG+AGG | + | chr8.1:62662132-62662151 | None:intergenic | 35.0% | |
| TATTTAGAAACTGACCCATC+AGG | + | chr8.1:62659961-62659980 | None:intergenic | 35.0% | |
| TCATTATTCACTGCACTATC+AGG | + | chr8.1:62659739-62659758 | None:intergenic | 35.0% | |
| TCTCCTTCTTTGTTAACAGT+TGG | + | chr8.1:62660840-62660859 | None:intergenic | 35.0% | |
| TGAAACTGAAGATTGACAAC+AGG | - | chr8.1:62661099-62661118 | MS.gene063849:intron | 35.0% | |
| TGAATGCAGTAGTGAAGAAA+GGG | - | chr8.1:62660629-62660648 | MS.gene063849:intron | 35.0% | |
| TGAGATACTTATGCAATAGC+AGG | - | chr8.1:62660688-62660707 | MS.gene063849:intron | 35.0% | |
| TGGATTCTTTGCCAAATTGA+TGG | + | chr8.1:62661129-62661148 | None:intergenic | 35.0% | |
| TTCAATGGAGAAGATGAAGT+TGG | + | chr8.1:62661633-62661652 | None:intergenic | 35.0% | |
| TTCATGCAATGCATCGAAAT+AGG | + | chr8.1:62662059-62662078 | None:intergenic | 35.0% | |
| TTGTCAATCTTCAGTTTCAG+TGG | + | chr8.1:62661098-62661117 | None:intergenic | 35.0% | |
| TTTCGATGCATTGCATGAAT+TGG | - | chr8.1:62662060-62662079 | MS.gene063849:intron | 35.0% | |
| ! | AGGATTTGAAGTAAAAGGGA+AGG | - | chr8.1:62660185-62660204 | MS.gene063849:intron | 35.0% |
| ! | CCACAAGGATTTGAAGTAAA+AGG | - | chr8.1:62660180-62660199 | MS.gene063849:intron | 35.0% |
| ! | CCTTTTACTTCAAATCCTTG+TGG | + | chr8.1:62660183-62660202 | None:intergenic | 35.0% |
| ! | GCATCGAAATAGGATTTTGA+AGG | + | chr8.1:62662049-62662068 | None:intergenic | 35.0% |
| ! | TCACAATCTTCTAGTCTTCT+GGG | + | chr8.1:62659709-62659728 | None:intergenic | 35.0% |
| ! | TCTATGGTTTTCTTCTTCTC+AGG | + | chr8.1:62659907-62659926 | None:intergenic | 35.0% |
| ! | TTGCGTTACAAAGGTGTATT+TGG | - | chr8.1:62661730-62661749 | MS.gene063849:intron | 35.0% |
| AAACCAGATTCCACTTCATC+AGG | - | chr8.1:62661177-62661196 | MS.gene063849:intron | 40.0% | |
| AAACTGGTCACTATCACACT+TGG | - | chr8.1:62660101-62660120 | MS.gene063849:intron | 40.0% | |
| AACCAGATTCCACTTCATCA+GGG | - | chr8.1:62661178-62661197 | MS.gene063849:intron | 40.0% | |
| ACATTGGAGAACTGCTTGAA+AGG | - | chr8.1:62660547-62660566 | MS.gene063849:intron | 40.0% | |
| AGATTGGTGTGGTGATAGAT+TGG | - | chr8.1:62660887-62660906 | MS.gene063849:intron | 40.0% | |
| AGGGATACTCTGATTCAGAT+TGG | - | chr8.1:62660871-62660890 | MS.gene063849:intron | 40.0% | |
| AGGTAACTCAACAAGTTTCC+AGG | + | chr8.1:62659887-62659906 | None:intergenic | 40.0% | |
| ATCAGGGAACAAGTCTCAAA+AGG | - | chr8.1:62661194-62661213 | MS.gene063849:intron | 40.0% | |
| ATGGCTTGACAATGTGATGA+AGG | - | chr8.1:62661049-62661068 | MS.gene063849:intron | 40.0% | |
| ATTGGCAGATGGTTTCACAA+AGG | - | chr8.1:62661253-62661272 | MS.gene063849:intron | 40.0% | |
| GAATTCACAACTAGCAAAGC+AGG | - | chr8.1:62660501-62660520 | MS.gene063849:intron | 40.0% | |
| GATCAGTTCCTACTTCAAAC+TGG | - | chr8.1:62660282-62660301 | MS.gene063849:intron | 40.0% | |
| GCAAAGAATCCAATTGCACA+TGG | - | chr8.1:62661137-62661156 | MS.gene063849:intron | 40.0% | |
| GTGTATGTTACACAACCACA+AGG | - | chr8.1:62660165-62660184 | MS.gene063849:intron | 40.0% | |
| TACTCTGATTCAGATTGGTG+TGG | - | chr8.1:62660876-62660895 | MS.gene063849:intron | 40.0% | |
| TGACTTATTAGCGCAGCAAT+TGG | + | chr8.1:62661689-62661708 | None:intergenic | 40.0% | |
| TGCATTTCTGAATGGACCTT+TGG | - | chr8.1:62660134-62660153 | MS.gene063849:intron | 40.0% | |
| TTGCAGCATGTCAAGCAATA+TGG | - | chr8.1:62661030-62661049 | MS.gene063849:intron | 40.0% | |
| TTGTCCTACTGAAGCTCAAT+TGG | - | chr8.1:62661235-62661254 | MS.gene063849:intron | 40.0% | |
| ! | ATGCATCAGCAGAAGTACAT+TGG | - | chr8.1:62660531-62660550 | MS.gene063849:intron | 40.0% |
| ! | CTCACAATCTTCTAGTCTTC+TGG | + | chr8.1:62659710-62659729 | None:intergenic | 40.0% |
| ! | GGAGAAGATGAAGTTGGTTA+AGG | + | chr8.1:62661627-62661646 | None:intergenic | 40.0% |
| ! | GGCTACCTATTCAAGTTCAA+TGG | - | chr8.1:62660927-62660946 | MS.gene063849:intron | 40.0% |
| ! | GTGAAAGGTACACTGAAGTA+TGG | - | chr8.1:62660804-62660823 | MS.gene063849:intron | 40.0% |
| !! | CAAAGGCTCTGAAGATTGAT+AGG | - | chr8.1:62661270-62661289 | MS.gene063849:intron | 40.0% |
| !! | TCAATGGTGTTGCAATCTCA+TGG | - | chr8.1:62660943-62660962 | MS.gene063849:intron | 40.0% |
| ACTGAAGCTCAATTGGCAGA+TGG | - | chr8.1:62661242-62661261 | MS.gene063849:intron | 45.0% | |
| ACTTGCTTGAGAGACAAGCT+GGG | - | chr8.1:62661296-62661315 | MS.gene063849:CDS | 45.0% | |
| AGAAGGAGAAGCTGAACTAG+AGG | - | chr8.1:62660851-62660870 | MS.gene063849:intron | 45.0% | |
| CAACAGGTCAGCCATCAATT+TGG | - | chr8.1:62661115-62661134 | MS.gene063849:intron | 45.0% | |
| CACTTGCAAGCAGCAAAAAC+TGG | - | chr8.1:62660085-62660104 | MS.gene063849:intron | 45.0% | |
| CATGAAGAAAGAGCAGTGAC+TGG | + | chr8.1:62660984-62661003 | None:intergenic | 45.0% | |
| CATTGGAAGCCCTATTTGTG+GGG | - | chr8.1:62662198-62662217 | MS.gene063849:CDS | 45.0% | |
| CTCATCTCACTGCATCAAAG+AGG | - | chr8.1:62660769-62660788 | MS.gene063849:intron | 45.0% | |
| GAAACCTCTAGCAACCAATC+TGG | + | chr8.1:62659989-62660008 | None:intergenic | 45.0% | |
| GAAGGAGAAGCTGAACTAGA+GGG | - | chr8.1:62660852-62660871 | MS.gene063849:intron | 45.0% | |
| GCAGTGAGATGAGACTTTCT+TGG | + | chr8.1:62660762-62660781 | None:intergenic | 45.0% | |
| GCATTGGAAGCCCTATTTGT+GGG | - | chr8.1:62662197-62662216 | MS.gene063849:CDS | 45.0% | |
| GCTGGGTCTCATTGAATGTT+AGG | - | chr8.1:62661313-62661332 | MS.gene063849:CDS | 45.0% | |
| GGTGTGGTGATAGATTGGAT+AGG | - | chr8.1:62660892-62660911 | MS.gene063849:intron | 45.0% | |
| TCTGCCAATTGAGCTTCAGT+AGG | + | chr8.1:62661242-62661261 | None:intergenic | 45.0% | |
| TGTGAAGCTGAGTACATTGC+TGG | - | chr8.1:62661002-62661021 | MS.gene063849:intron | 45.0% | |
| TTCCCTGATGAAGTGGAATC+TGG | + | chr8.1:62661183-62661202 | None:intergenic | 45.0% | |
| TTGCTTCTGCCATGTGCAAT+TGG | + | chr8.1:62661149-62661168 | None:intergenic | 45.0% | |
| TTGTGAGGCCACAAAGAAAC+AGG | - | chr8.1:62659677-62659696 | MS.gene063849:intron | 45.0% | |
| TTTCTTTGTGGCCTCACAAC+TGG | + | chr8.1:62659676-62659695 | None:intergenic | 45.0% | |
| ! | AAAGCCAGATTGGTTGCTAG+AGG | - | chr8.1:62659982-62660001 | MS.gene063849:intron | 45.0% |
| ! | AGACTTGTTCCCTGATGAAG+TGG | + | chr8.1:62661190-62661209 | None:intergenic | 45.0% |
| ! | AGCATTGGAAGCCCTATTTG+TGG | - | chr8.1:62662196-62662215 | MS.gene063849:CDS | 45.0% |
| ! | AGTAAAAGGGAAGGAGCACA+TGG | - | chr8.1:62660194-62660213 | MS.gene063849:intron | 45.0% |
| ! | TAGCGCAGCAATTGGTTTCT+TGG | + | chr8.1:62661681-62661700 | None:intergenic | 45.0% |
| ! | TCCTACTTCAAACTGGCTTC+AGG | - | chr8.1:62660289-62660308 | MS.gene063849:intron | 45.0% |
| ! | TCCTGAAGCCAGTTTGAAGT+AGG | + | chr8.1:62660293-62660312 | None:intergenic | 45.0% |
| !! | GGTGTTTGGGTTGATGAACT+TGG | - | chr8.1:62662006-62662025 | MS.gene063849:intron | 45.0% |
| !! | TTGGATAGGAAGAGCACTTC+TGG | - | chr8.1:62660906-62660925 | MS.gene063849:intron | 45.0% |
| AATAGGGCTTCCAATGCTCG+AGG | + | chr8.1:62662194-62662213 | None:intergenic | 50.0% | |
| ATCCTCTTGTTCCATGCCCT+AGG | + | chr8.1:62660261-62660280 | None:intergenic | 50.0% | |
| CACTTGCTTGAGAGACAAGC+TGG | - | chr8.1:62661295-62661314 | MS.gene063849:CDS | 50.0% | |
| ! | CCAATGCTCGAGGTTTTCAC+CGG | + | chr8.1:62662184-62662203 | None:intergenic | 50.0% |
| ! | GGAGCATGCCTGTTTCTTTG+TGG | + | chr8.1:62659688-62659707 | None:intergenic | 50.0% |
| ! | TTTTCACCGGATGGGATCTG+AGG | + | chr8.1:62662171-62662190 | None:intergenic | 50.0% |
| AAGCCACACCACCAGTTGTG+AGG | - | chr8.1:62659662-62659681 | MS.gene063849:intron | 55.0% | |
| ATGCCCTAGGTGCTTGCTTC+AGG | + | chr8.1:62660248-62660267 | None:intergenic | 55.0% | |
| ATGGCCTGAAGCAAGCACCT+AGG | - | chr8.1:62660241-62660260 | MS.gene063849:intron | 55.0% | |
| CAACTCCCGCCCCACAAATA+GGG | + | chr8.1:62662210-62662229 | None:intergenic | 55.0% | |
| CACCTAGGGCATGGAACAAG+AGG | - | chr8.1:62660256-62660275 | MS.gene063849:intron | 55.0% | |
| CCGGTGAAAACCTCGAGCAT+TGG | - | chr8.1:62662181-62662200 | MS.gene063849:CDS | 55.0% | |
| CTTTGTGGCCTCACAACTGG+TGG | + | chr8.1:62659673-62659692 | None:intergenic | 55.0% | |
| TACCCTCCTCAGATCCCATC+CGG | - | chr8.1:62662162-62662181 | MS.gene063849:CDS | 55.0% | |
| TCAACTCCCGCCCCACAAAT+AGG | + | chr8.1:62662211-62662230 | None:intergenic | 55.0% | |
| TGAAGCAAGCACCTAGGGCA+TGG | - | chr8.1:62660247-62660266 | MS.gene063849:intron | 55.0% | |
| TGGAAGCCCTATTTGTGGGG+CGG | - | chr8.1:62662201-62662220 | MS.gene063849:CDS | 55.0% | |
| TGGCCTGAAGCAAGCACCTA+GGG | - | chr8.1:62660242-62660261 | MS.gene063849:intron | 55.0% | |
| ! | GCTCGAGGTTTTCACCGGAT+GGG | + | chr8.1:62662179-62662198 | None:intergenic | 55.0% |
| ! | TGCTCGAGGTTTTCACCGGA+TGG | + | chr8.1:62662180-62662199 | None:intergenic | 55.0% |
| CACCGGATGGGATCTGAGGA+GGG | + | chr8.1:62662167-62662186 | None:intergenic | 60.0% | |
| GGAAGCCCTATTTGTGGGGC+GGG | - | chr8.1:62662202-62662221 | MS.gene063849:CDS | 60.0% | |
| TCACCGGATGGGATCTGAGG+AGG | + | chr8.1:62662168-62662187 | None:intergenic | 60.0% | |
| ! | TGGCCTCACAACTGGTGGTG+TGG | + | chr8.1:62659668-62659687 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 62659598 | 62662246 | 62659598 | ID=MS.gene063849 |
| chr8.1 | mRNA | 62659598 | 62662246 | 62659598 | ID=MS.gene063849.t1;Parent=MS.gene063849 |
| chr8.1 | exon | 62662084 | 62662246 | 62662084 | ID=MS.gene063849.t1.exon1;Parent=MS.gene063849.t1 |
| chr8.1 | CDS | 62662084 | 62662246 | 62662084 | ID=cds.MS.gene063849.t1;Parent=MS.gene063849.t1 |
| chr8.1 | exon | 62661276 | 62661375 | 62661276 | ID=MS.gene063849.t1.exon2;Parent=MS.gene063849.t1 |
| chr8.1 | CDS | 62661276 | 62661375 | 62661276 | ID=cds.MS.gene063849.t1;Parent=MS.gene063849.t1 |
| chr8.1 | exon | 62659598 | 62659670 | 62659598 | ID=MS.gene063849.t1.exon3;Parent=MS.gene063849.t1 |
| chr8.1 | CDS | 62659598 | 62659670 | 62659598 | ID=cds.MS.gene063849.t1;Parent=MS.gene063849.t1 |
| Gene Sequence |
| Protein sequence |
