Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063977.t1 | XP_003614163.1 | 95.3 | 514 | 24 | 0 | 1 | 514 | 147 | 660 | 1.40E-283 | 984.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063977.t1 | P0C7R4 | 66.2 | 515 | 168 | 4 | 1 | 513 | 147 | 657 | 1.2e-195 | 684.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063977.t1 | G7JZ42 | 95.3 | 514 | 24 | 0 | 1 | 514 | 147 | 660 | 9.9e-284 | 984.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063977 | MS.gene29333 | PPI |
| MS.gene063977 | MS.gene050870 | PPI |
| MS.gene035805 | MS.gene063977 | PPI |
| MS.gene063977 | MS.gene050867 | PPI |
| MS.gene063977 | MS.gene072467 | PPI |
| MS.gene063977 | MS.gene064542 | PPI |
| MS.gene063977 | MS.gene73119 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063977.t1 | MTR_5g045620 | 95.331 | 514 | 24 | 0 | 1 | 514 | 147 | 660 | 0.0 | 1021 |
| MS.gene063977.t1 | MTR_5g044930 | 95.136 | 514 | 25 | 0 | 1 | 514 | 151 | 664 | 0.0 | 1020 |
| MS.gene063977.t1 | MTR_4g081540 | 34.524 | 336 | 208 | 6 | 185 | 512 | 454 | 785 | 2.76e-61 | 215 |
| MS.gene063977.t1 | MTR_1g066900 | 24.476 | 572 | 357 | 13 | 10 | 512 | 136 | 701 | 8.98e-39 | 150 |
| MS.gene063977.t1 | MTR_5g459290 | 87.719 | 57 | 7 | 0 | 22 | 78 | 26 | 82 | 7.80e-30 | 112 |
| MS.gene063977.t1 | MTR_4g099200 | 23.031 | 508 | 294 | 16 | 67 | 513 | 215 | 686 | 2.16e-29 | 122 |
| MS.gene063977.t1 | MTR_1g048080 | 25.937 | 347 | 215 | 10 | 96 | 409 | 469 | 806 | 7.81e-16 | 81.3 |
| MS.gene063977.t1 | MTR_6g079920 | 22.222 | 468 | 304 | 15 | 58 | 486 | 107 | 553 | 1.72e-14 | 76.6 |
| MS.gene063977.t1 | MTR_1g068960 | 23.698 | 384 | 259 | 10 | 65 | 439 | 163 | 521 | 4.55e-14 | 75.5 |
| MS.gene063977.t1 | MTR_3g034990 | 22.940 | 449 | 282 | 16 | 5 | 414 | 82 | 505 | 5.41e-14 | 74.7 |
| MS.gene063977.t1 | MTR_6g078160 | 24.561 | 285 | 195 | 5 | 144 | 423 | 234 | 503 | 6.35e-14 | 74.7 |
| MS.gene063977.t1 | MTR_1g031720 | 23.611 | 360 | 257 | 7 | 66 | 422 | 309 | 653 | 1.81e-13 | 73.6 |
| MS.gene063977.t1 | MTR_6g079590 | 23.196 | 388 | 254 | 13 | 65 | 437 | 233 | 591 | 1.86e-13 | 73.2 |
| MS.gene063977.t1 | MTR_4g068360 | 23.464 | 358 | 226 | 11 | 67 | 406 | 250 | 577 | 2.70e-13 | 72.8 |
| MS.gene063977.t1 | MTR_6g079830 | 22.762 | 391 | 259 | 11 | 58 | 414 | 107 | 488 | 3.10e-13 | 72.8 |
| MS.gene063977.t1 | MTR_5g095130 | 23.113 | 212 | 158 | 4 | 226 | 436 | 593 | 800 | 3.49e-13 | 72.8 |
| MS.gene063977.t1 | MTR_6g022260 | 21.809 | 376 | 270 | 8 | 54 | 422 | 147 | 505 | 5.41e-13 | 71.6 |
| MS.gene063977.t1 | MTR_1g050495 | 24.585 | 301 | 201 | 6 | 144 | 437 | 236 | 517 | 1.04e-12 | 70.9 |
| MS.gene063977.t1 | MTR_7g091410 | 21.117 | 412 | 290 | 8 | 67 | 469 | 288 | 673 | 1.19e-12 | 70.9 |
| MS.gene063977.t1 | MTR_7g091410 | 21.117 | 412 | 290 | 8 | 67 | 469 | 149 | 534 | 1.21e-12 | 70.9 |
| MS.gene063977.t1 | MTR_1g045880 | 24.000 | 300 | 206 | 7 | 118 | 411 | 229 | 512 | 1.24e-12 | 70.9 |
| MS.gene063977.t1 | MTR_6g078190 | 22.460 | 374 | 239 | 12 | 58 | 423 | 84 | 414 | 1.43e-12 | 70.5 |
| MS.gene063977.t1 | MTR_2g037740 | 24.016 | 254 | 187 | 4 | 184 | 437 | 130 | 377 | 1.63e-12 | 70.9 |
| MS.gene063977.t1 | MTR_4g074390 | 22.343 | 367 | 245 | 8 | 86 | 437 | 216 | 557 | 1.66e-12 | 70.1 |
| MS.gene063977.t1 | MTR_4g108060 | 22.071 | 367 | 246 | 8 | 86 | 437 | 82 | 423 | 1.85e-12 | 69.7 |
| MS.gene063977.t1 | MTR_2g035630 | 22.140 | 271 | 200 | 4 | 144 | 414 | 236 | 495 | 2.63e-12 | 69.7 |
| MS.gene063977.t1 | MTR_7g091410 | 22.302 | 417 | 279 | 12 | 67 | 469 | 84 | 469 | 2.63e-12 | 69.7 |
| MS.gene063977.t1 | MTR_2g049740 | 23.362 | 351 | 222 | 9 | 90 | 406 | 215 | 552 | 2.70e-12 | 70.1 |
| MS.gene063977.t1 | MTR_3g061000 | 24.268 | 239 | 169 | 5 | 184 | 419 | 281 | 510 | 2.82e-12 | 69.3 |
| MS.gene063977.t1 | MTR_3g061000 | 23.361 | 244 | 169 | 4 | 238 | 476 | 157 | 387 | 7.28e-12 | 68.2 |
| MS.gene063977.t1 | MTR_7g103600 | 23.823 | 361 | 254 | 6 | 63 | 422 | 183 | 523 | 3.09e-12 | 69.7 |
| MS.gene063977.t1 | MTR_7g091410 | 21.117 | 412 | 290 | 8 | 67 | 469 | 43 | 428 | 3.39e-12 | 69.3 |
| MS.gene063977.t1 | MTR_3g037490 | 21.286 | 451 | 276 | 13 | 21 | 418 | 117 | 541 | 3.93e-12 | 68.9 |
| MS.gene063977.t1 | MTR_5g090210 | 22.506 | 431 | 234 | 12 | 57 | 425 | 330 | 722 | 3.95e-12 | 69.3 |
| MS.gene063977.t1 | MTR_4g108060 | 22.071 | 367 | 246 | 8 | 86 | 437 | 216 | 557 | 3.96e-12 | 68.9 |
| MS.gene063977.t1 | MTR_4g091600 | 26.606 | 218 | 116 | 5 | 249 | 425 | 213 | 427 | 4.23e-12 | 69.3 |
| MS.gene063977.t1 | MTR_7g076550 | 25.234 | 214 | 150 | 4 | 217 | 425 | 172 | 380 | 5.20e-12 | 68.6 |
| MS.gene063977.t1 | MTR_6g065540 | 23.898 | 431 | 255 | 18 | 67 | 455 | 138 | 537 | 6.01e-12 | 68.6 |
| MS.gene063977.t1 | MTR_5g045490 | 26.749 | 243 | 168 | 5 | 220 | 461 | 320 | 553 | 6.50e-12 | 68.6 |
| MS.gene063977.t1 | MTR_6g079380 | 23.077 | 364 | 248 | 10 | 67 | 408 | 136 | 489 | 1.03e-11 | 67.8 |
| MS.gene063977.t1 | MTR_8g105170 | 25.728 | 206 | 151 | 2 | 221 | 425 | 242 | 446 | 2.00e-11 | 67.4 |
| MS.gene063977.t1 | MTR_6g079250 | 21.555 | 283 | 206 | 6 | 144 | 423 | 80 | 349 | 2.39e-11 | 65.9 |
| MS.gene063977.t1 | MTR_7g011500 | 20.727 | 275 | 202 | 4 | 180 | 454 | 223 | 481 | 2.62e-11 | 66.6 |
| MS.gene063977.t1 | MTR_7g011500 | 24.424 | 217 | 150 | 4 | 267 | 480 | 202 | 407 | 8.77e-11 | 65.1 |
| MS.gene063977.t1 | MTR_2g103520 | 24.335 | 263 | 167 | 7 | 226 | 476 | 211 | 453 | 3.40e-11 | 66.2 |
| MS.gene063977.t1 | MTR_7g007400 | 25.229 | 218 | 155 | 3 | 237 | 449 | 338 | 552 | 4.16e-11 | 65.9 |
| MS.gene063977.t1 | MTR_6g471100 | 20.958 | 334 | 238 | 9 | 81 | 405 | 288 | 604 | 4.32e-11 | 65.9 |
| MS.gene063977.t1 | MTR_6g078210 | 25.581 | 172 | 127 | 1 | 237 | 408 | 334 | 504 | 4.55e-11 | 65.5 |
| MS.gene063977.t1 | MTR_3g053350 | 24.483 | 290 | 206 | 6 | 179 | 466 | 202 | 480 | 4.97e-11 | 65.9 |
| MS.gene063977.t1 | MTR_2g026645 | 22.188 | 320 | 231 | 7 | 89 | 404 | 166 | 471 | 6.02e-11 | 65.5 |
| MS.gene063977.t1 | MTR_6g069840 | 22.286 | 350 | 248 | 10 | 67 | 410 | 195 | 526 | 7.48e-11 | 65.1 |
| MS.gene063977.t1 | MTR_6g069840 | 22.286 | 350 | 248 | 10 | 67 | 410 | 179 | 510 | 8.98e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063977.t1 | AT1G69290 | 66.085 | 516 | 169 | 4 | 1 | 514 | 147 | 658 | 0.0 | 711 |
| MS.gene063977.t1 | AT1G68980 | 59.728 | 514 | 194 | 4 | 1 | 514 | 119 | 619 | 0.0 | 627 |
| MS.gene063977.t1 | AT1G03100 | 36.202 | 337 | 202 | 7 | 185 | 513 | 462 | 793 | 2.67e-66 | 229 |
| MS.gene063977.t1 | AT3G09650 | 28.933 | 356 | 233 | 4 | 176 | 512 | 408 | 762 | 4.26e-44 | 166 |
| MS.gene063977.t1 | AT4G17616 | 24.809 | 262 | 163 | 5 | 226 | 487 | 416 | 643 | 1.18e-22 | 102 |
| MS.gene063977.t1 | AT5G64320 | 24.479 | 384 | 251 | 12 | 66 | 438 | 284 | 639 | 2.82e-17 | 85.5 |
| MS.gene063977.t1 | AT3G54980 | 24.936 | 393 | 251 | 10 | 67 | 425 | 266 | 648 | 1.10e-16 | 84.0 |
| MS.gene063977.t1 | AT3G54980 | 24.936 | 393 | 251 | 10 | 67 | 425 | 266 | 648 | 1.10e-16 | 84.0 |
| MS.gene063977.t1 | AT1G64583 | 25.833 | 360 | 224 | 8 | 80 | 405 | 115 | 465 | 1.12e-16 | 83.2 |
| MS.gene063977.t1 | AT1G64583 | 27.155 | 232 | 152 | 6 | 196 | 416 | 82 | 307 | 4.69e-11 | 65.5 |
| MS.gene063977.t1 | AT1G64583 | 25.833 | 360 | 224 | 8 | 80 | 405 | 90 | 440 | 1.73e-16 | 82.4 |
| MS.gene063977.t1 | AT1G64583 | 27.155 | 232 | 152 | 6 | 196 | 416 | 57 | 282 | 5.71e-11 | 65.1 |
| MS.gene063977.t1 | AT1G62720 | 25.538 | 372 | 242 | 12 | 67 | 430 | 137 | 481 | 8.91e-16 | 80.1 |
| MS.gene063977.t1 | AT5G04810 | 25.703 | 249 | 181 | 3 | 225 | 472 | 629 | 874 | 2.96e-14 | 76.3 |
| MS.gene063977.t1 | AT1G64100 | 25.103 | 243 | 170 | 4 | 237 | 479 | 418 | 648 | 3.14e-14 | 76.3 |
| MS.gene063977.t1 | AT1G64100 | 24.312 | 218 | 157 | 2 | 238 | 455 | 209 | 418 | 7.07e-11 | 65.5 |
| MS.gene063977.t1 | AT1G64100 | 25.854 | 205 | 144 | 3 | 261 | 465 | 438 | 634 | 4.61e-14 | 75.5 |
| MS.gene063977.t1 | AT1G64100 | 24.312 | 218 | 157 | 2 | 238 | 455 | 209 | 418 | 7.69e-11 | 65.1 |
| MS.gene063977.t1 | AT1G64100 | 25.854 | 205 | 144 | 3 | 261 | 465 | 438 | 634 | 4.61e-14 | 75.5 |
| MS.gene063977.t1 | AT1G64100 | 24.312 | 218 | 157 | 2 | 238 | 455 | 209 | 418 | 7.69e-11 | 65.1 |
| MS.gene063977.t1 | AT3G53700 | 22.581 | 403 | 280 | 12 | 67 | 462 | 187 | 564 | 1.47e-13 | 73.9 |
| MS.gene063977.t1 | AT5G38730 | 26.316 | 228 | 154 | 4 | 226 | 453 | 209 | 422 | 1.47e-13 | 73.6 |
| MS.gene063977.t1 | AT1G12620 | 27.835 | 194 | 135 | 2 | 237 | 430 | 369 | 557 | 2.26e-13 | 73.2 |
| MS.gene063977.t1 | AT1G12620 | 22.626 | 358 | 258 | 9 | 76 | 429 | 114 | 456 | 5.92e-11 | 65.5 |
| MS.gene063977.t1 | AT5G39710 | 21.053 | 399 | 261 | 8 | 66 | 425 | 166 | 549 | 3.95e-13 | 72.4 |
| MS.gene063977.t1 | AT1G63080 | 25.000 | 204 | 146 | 2 | 225 | 425 | 210 | 409 | 5.07e-13 | 72.0 |
| MS.gene063977.t1 | AT1G63080 | 21.728 | 405 | 284 | 10 | 80 | 476 | 109 | 488 | 8.11e-11 | 65.1 |
| MS.gene063977.t1 | AT1G63080 | 25.000 | 204 | 146 | 2 | 225 | 425 | 210 | 409 | 5.07e-13 | 72.0 |
| MS.gene063977.t1 | AT1G63080 | 21.728 | 405 | 284 | 10 | 80 | 476 | 109 | 488 | 8.11e-11 | 65.1 |
| MS.gene063977.t1 | AT1G63080 | 25.000 | 204 | 146 | 2 | 225 | 425 | 210 | 409 | 5.07e-13 | 72.0 |
| MS.gene063977.t1 | AT1G63080 | 21.728 | 405 | 284 | 10 | 80 | 476 | 109 | 488 | 8.11e-11 | 65.1 |
| MS.gene063977.t1 | AT5G61400 | 21.136 | 317 | 210 | 5 | 141 | 425 | 95 | 403 | 6.06e-13 | 72.0 |
| MS.gene063977.t1 | AT1G62680 | 25.128 | 195 | 136 | 3 | 229 | 417 | 132 | 322 | 6.44e-13 | 71.6 |
| MS.gene063977.t1 | AT1G62680 | 25.128 | 195 | 136 | 3 | 229 | 417 | 132 | 322 | 6.44e-13 | 71.6 |
| MS.gene063977.t1 | AT4G19440 | 23.058 | 399 | 262 | 10 | 86 | 450 | 359 | 746 | 8.28e-13 | 71.6 |
| MS.gene063977.t1 | AT4G19440 | 23.058 | 399 | 262 | 10 | 86 | 450 | 359 | 746 | 8.28e-13 | 71.6 |
| MS.gene063977.t1 | AT4G19440 | 23.058 | 399 | 262 | 10 | 86 | 450 | 359 | 746 | 8.28e-13 | 71.6 |
| MS.gene063977.t1 | AT4G19440 | 23.058 | 399 | 262 | 10 | 86 | 450 | 359 | 746 | 8.28e-13 | 71.6 |
| MS.gene063977.t1 | AT1G63330 | 26.087 | 230 | 161 | 4 | 206 | 431 | 272 | 496 | 1.29e-12 | 70.5 |
| MS.gene063977.t1 | AT1G63330 | 26.087 | 230 | 161 | 4 | 206 | 431 | 272 | 496 | 1.29e-12 | 70.5 |
| MS.gene063977.t1 | AT1G63330 | 26.087 | 230 | 161 | 4 | 206 | 431 | 272 | 496 | 1.29e-12 | 70.5 |
| MS.gene063977.t1 | AT1G12300 | 23.864 | 264 | 185 | 5 | 171 | 430 | 322 | 573 | 1.87e-12 | 70.1 |
| MS.gene063977.t1 | AT1G12300 | 22.222 | 405 | 282 | 11 | 80 | 476 | 132 | 511 | 7.30e-12 | 68.6 |
| MS.gene063977.t1 | AT3G09060 | 23.894 | 339 | 191 | 9 | 144 | 419 | 293 | 627 | 2.00e-12 | 70.1 |
| MS.gene063977.t1 | AT3G09060 | 23.894 | 339 | 191 | 9 | 144 | 419 | 293 | 627 | 2.00e-12 | 70.1 |
| MS.gene063977.t1 | AT3G06920 | 21.801 | 211 | 162 | 2 | 226 | 436 | 558 | 765 | 2.12e-12 | 70.5 |
| MS.gene063977.t1 | AT1G63230 | 25.000 | 200 | 149 | 1 | 226 | 425 | 47 | 245 | 2.35e-12 | 68.6 |
| MS.gene063977.t1 | AT4G11690 | 22.039 | 363 | 225 | 6 | 104 | 425 | 162 | 507 | 2.66e-12 | 69.7 |
| MS.gene063977.t1 | AT3G06920 | 21.801 | 211 | 162 | 2 | 226 | 436 | 572 | 779 | 2.87e-12 | 70.1 |
| MS.gene063977.t1 | AT3G06920 | 21.801 | 211 | 162 | 2 | 226 | 436 | 572 | 779 | 2.87e-12 | 70.1 |
| MS.gene063977.t1 | AT1G63400 | 22.195 | 401 | 287 | 10 | 80 | 476 | 129 | 508 | 2.90e-12 | 69.7 |
| MS.gene063977.t1 | AT1G63400 | 21.701 | 341 | 243 | 8 | 96 | 429 | 111 | 434 | 1.50e-11 | 67.4 |
| MS.gene063977.t1 | AT1G63400 | 25.108 | 231 | 164 | 4 | 205 | 431 | 346 | 571 | 6.13e-11 | 65.5 |
| MS.gene063977.t1 | AT1G22960 | 24.752 | 404 | 263 | 15 | 45 | 430 | 310 | 690 | 3.24e-12 | 69.7 |
| MS.gene063977.t1 | AT1G22960 | 24.752 | 404 | 263 | 15 | 45 | 430 | 310 | 690 | 3.24e-12 | 69.7 |
| MS.gene063977.t1 | AT5G61990 | 24.405 | 168 | 120 | 2 | 261 | 425 | 563 | 726 | 3.54e-12 | 69.7 |
| MS.gene063977.t1 | AT5G61990 | 22.402 | 433 | 245 | 13 | 88 | 445 | 470 | 886 | 1.19e-11 | 68.2 |
| MS.gene063977.t1 | AT3G16710 | 31.148 | 183 | 120 | 4 | 226 | 405 | 123 | 302 | 4.38e-12 | 68.9 |
| MS.gene063977.t1 | AT3G16710 | 22.812 | 377 | 240 | 11 | 67 | 406 | 116 | 478 | 1.97e-11 | 66.6 |
| MS.gene063977.t1 | AT3G16710 | 31.148 | 183 | 120 | 4 | 226 | 405 | 123 | 302 | 4.39e-12 | 68.6 |
| MS.gene063977.t1 | AT1G62670 | 23.448 | 290 | 204 | 6 | 138 | 423 | 288 | 563 | 4.60e-12 | 68.9 |
| MS.gene063977.t1 | AT1G62670 | 23.448 | 290 | 204 | 6 | 138 | 423 | 288 | 563 | 4.60e-12 | 68.9 |
| MS.gene063977.t1 | AT3G22470 | 27.778 | 234 | 154 | 6 | 238 | 469 | 368 | 588 | 5.00e-12 | 68.9 |
| MS.gene063977.t1 | AT1G63130 | 24.206 | 252 | 175 | 5 | 184 | 431 | 328 | 567 | 5.67e-12 | 68.6 |
| MS.gene063977.t1 | AT1G63130 | 20.681 | 411 | 270 | 9 | 67 | 476 | 149 | 504 | 1.79e-11 | 67.0 |
| MS.gene063977.t1 | AT1G63130 | 24.206 | 252 | 175 | 5 | 184 | 431 | 328 | 567 | 5.67e-12 | 68.6 |
| MS.gene063977.t1 | AT1G63130 | 20.681 | 411 | 270 | 9 | 67 | 476 | 149 | 504 | 1.79e-11 | 67.0 |
| MS.gene063977.t1 | AT5G50280 | 23.166 | 259 | 192 | 1 | 209 | 467 | 333 | 584 | 6.24e-12 | 68.6 |
| MS.gene063977.t1 | AT5G41170 | 27.381 | 168 | 121 | 1 | 239 | 406 | 26 | 192 | 6.94e-12 | 67.8 |
| MS.gene063977.t1 | AT5G41170 | 27.381 | 168 | 121 | 1 | 239 | 406 | 126 | 292 | 7.78e-12 | 68.2 |
| MS.gene063977.t1 | AT5G41170 | 27.381 | 168 | 121 | 1 | 239 | 406 | 126 | 292 | 7.86e-12 | 68.2 |
| MS.gene063977.t1 | AT1G63150 | 23.707 | 232 | 162 | 3 | 226 | 456 | 229 | 446 | 9.56e-12 | 68.2 |
| MS.gene063977.t1 | AT1G63150 | 23.077 | 403 | 275 | 12 | 80 | 471 | 127 | 505 | 1.43e-11 | 67.4 |
| MS.gene063977.t1 | AT1G63150 | 23.707 | 232 | 162 | 3 | 226 | 456 | 229 | 446 | 9.56e-12 | 68.2 |
| MS.gene063977.t1 | AT1G63150 | 23.077 | 403 | 275 | 12 | 80 | 471 | 127 | 505 | 1.43e-11 | 67.4 |
| MS.gene063977.t1 | AT1G62590 | 26.087 | 230 | 161 | 4 | 206 | 431 | 347 | 571 | 1.13e-11 | 67.8 |
| MS.gene063977.t1 | AT1G62590 | 26.087 | 230 | 161 | 4 | 206 | 431 | 347 | 571 | 1.13e-11 | 67.8 |
| MS.gene063977.t1 | AT1G19520 | 21.739 | 322 | 234 | 8 | 86 | 403 | 400 | 707 | 1.14e-11 | 67.8 |
| MS.gene063977.t1 | AT4G26800 | 24.118 | 340 | 240 | 10 | 67 | 403 | 156 | 480 | 1.60e-11 | 67.0 |
| MS.gene063977.t1 | AT1G05670 | 19.949 | 391 | 272 | 8 | 67 | 425 | 279 | 660 | 1.77e-11 | 67.4 |
| MS.gene063977.t1 | AT1G05670 | 19.949 | 391 | 272 | 8 | 67 | 425 | 279 | 660 | 1.77e-11 | 67.4 |
| MS.gene063977.t1 | AT1G05670 | 19.949 | 391 | 272 | 8 | 67 | 425 | 279 | 660 | 1.77e-11 | 67.4 |
| MS.gene063977.t1 | AT1G79080 | 23.512 | 336 | 206 | 8 | 67 | 399 | 104 | 391 | 1.87e-11 | 67.0 |
| MS.gene063977.t1 | AT4G26800 | 24.118 | 340 | 240 | 10 | 67 | 403 | 81 | 405 | 1.91e-11 | 66.6 |
| MS.gene063977.t1 | AT1G62930 | 25.000 | 404 | 272 | 14 | 80 | 476 | 124 | 503 | 2.01e-11 | 67.0 |
| MS.gene063977.t1 | AT5G65560 | 23.636 | 220 | 124 | 5 | 257 | 476 | 325 | 500 | 2.33e-11 | 67.0 |
| MS.gene063977.t1 | AT5G65560 | 23.636 | 220 | 124 | 5 | 257 | 476 | 325 | 500 | 2.33e-11 | 67.0 |
| MS.gene063977.t1 | AT5G65560 | 23.636 | 220 | 124 | 5 | 257 | 476 | 325 | 500 | 2.33e-11 | 67.0 |
| MS.gene063977.t1 | AT1G12700 | 22.222 | 243 | 181 | 3 | 238 | 480 | 351 | 585 | 2.34e-11 | 66.6 |
| MS.gene063977.t1 | AT4G26800 | 24.118 | 340 | 240 | 10 | 67 | 403 | 11 | 335 | 2.77e-11 | 65.9 |
| MS.gene063977.t1 | AT1G12700 | 22.222 | 243 | 181 | 3 | 238 | 480 | 367 | 601 | 3.12e-11 | 66.2 |
| MS.gene063977.t1 | AT1G12700 | 22.222 | 243 | 181 | 3 | 238 | 480 | 367 | 601 | 3.12e-11 | 66.2 |
| MS.gene063977.t1 | AT1G62910 | 22.989 | 348 | 248 | 7 | 80 | 422 | 127 | 459 | 4.30e-11 | 65.9 |
| MS.gene063977.t1 | AT1G62910 | 23.715 | 253 | 175 | 6 | 184 | 431 | 330 | 569 | 4.49e-11 | 65.9 |
| MS.gene063977.t1 | AT2G39230 | 25.789 | 190 | 141 | 0 | 234 | 423 | 463 | 652 | 4.45e-11 | 66.2 |
| MS.gene063977.t1 | AT5G27270 | 23.446 | 354 | 232 | 11 | 86 | 408 | 651 | 996 | 4.92e-11 | 66.2 |
| MS.gene063977.t1 | AT3G07290 | 23.562 | 365 | 256 | 10 | 54 | 414 | 359 | 704 | 5.14e-11 | 65.9 |
| MS.gene063977.t1 | AT1G12775 | 23.111 | 225 | 165 | 3 | 209 | 429 | 252 | 472 | 5.32e-11 | 65.5 |
| MS.gene063977.t1 | AT1G12775 | 22.409 | 357 | 247 | 7 | 67 | 414 | 191 | 526 | 7.81e-11 | 65.1 |
| MS.gene063977.t1 | AT3G61520 | 20.606 | 330 | 247 | 5 | 101 | 427 | 366 | 683 | 5.96e-11 | 65.5 |
| MS.gene063977.t1 | AT5G27270 | 23.446 | 354 | 232 | 11 | 86 | 408 | 446 | 791 | 7.89e-11 | 65.5 |
| MS.gene063977.t1 | AT5G27270 | 23.446 | 354 | 232 | 11 | 86 | 408 | 446 | 791 | 7.89e-11 | 65.5 |
| MS.gene063977.t1 | AT4G11690 | 22.997 | 287 | 179 | 6 | 180 | 425 | 195 | 480 | 9.23e-11 | 64.7 |
Find 95 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTATTTATATGCACTTAA+AGG | 0.150295 | 5.2:-36441496 | MS.gene063977:CDS |
| TGGGAGGCTCTGTGGGTCTT+GGG | 0.176003 | 5.2:-36441084 | MS.gene063977:CDS |
| TTGGGAGGCTCTGTGGGTCT+TGG | 0.177689 | 5.2:-36441085 | MS.gene063977:CDS |
| TCTTCATAAGGGAAATATTA+AGG | 0.192767 | 5.2:-36441254 | MS.gene063977:CDS |
| CTCTTATTGCTTTCAAGAAT+TGG | 0.227572 | 5.2:-36440325 | MS.gene063977:CDS |
| GATTATTGAAGCTCAGAAAT+TGG | 0.273337 | 5.2:-36441218 | MS.gene063977:CDS |
| AGCTCAAAGTGGCCAGATTA+AGG | 0.274692 | 5.2:-36440373 | MS.gene063977:CDS |
| GAGATGATGACAAACAAATT+TGG | 0.280789 | 5.2:-36441318 | MS.gene063977:CDS |
| CCGAAACATATCCGTTAATC+AGG | 0.336662 | 5.2:+36440627 | None:intergenic |
| CTTCATAAGGGAAATATTAA+GGG | 0.341682 | 5.2:-36441253 | MS.gene063977:CDS |
| AAGCCAGATGAGTTTAGTTT+TGG | 0.342276 | 5.2:-36441526 | MS.gene063977:CDS |
| GGTCATTCGGCTCAAATTGC+AGG | 0.350988 | 5.2:+36440663 | None:intergenic |
| TGTTTCTATTAGAGCATCAT+AGG | 0.352643 | 5.2:+36440955 | None:intergenic |
| GTTGACGAGTCTATAGGTTT+TGG | 0.353471 | 5.2:-36441178 | MS.gene063977:CDS |
| TGAAAATATTTGTTGATAAG+TGG | 0.364460 | 5.2:-36440430 | MS.gene063977:CDS |
| GGAATGCATCAACCAGATTC+TGG | 0.365582 | 5.2:+36440519 | None:intergenic |
| CTTATTTATATGCACTTAAA+GGG | 0.372712 | 5.2:-36441495 | MS.gene063977:CDS |
| GATCAAATTTGACCAGAATC+TGG | 0.373436 | 5.2:-36440531 | MS.gene063977:CDS |
| TCTTATTGCTTTCAAGAATT+GGG | 0.377175 | 5.2:-36440324 | MS.gene063977:CDS |
| TGGTCAAATTTGATCTCCTT+CGG | 0.380909 | 5.2:+36440539 | None:intergenic |
| GACTATAATGACAGGTTTGA+TGG | 0.384239 | 5.2:-36440843 | MS.gene063977:CDS |
| GACAAGTATGTCTGGTCATT+CGG | 0.398593 | 5.2:+36440650 | None:intergenic |
| CCTGATTAACGGATATGTTT+CGG | 0.406581 | 5.2:-36440627 | MS.gene063977:CDS |
| AGACAACTGCAGGGTTGCTT+TGG | 0.409968 | 5.2:-36441677 | MS.gene063977:CDS |
| GAGATACAAGCAAGCGTTCA+TGG | 0.416295 | 5.2:-36440408 | MS.gene063977:CDS |
| GGGAGGCTCTGTGGGTCTTG+GGG | 0.421493 | 5.2:-36441083 | MS.gene063977:CDS |
| CTTGATGAGATGAATGCTTT+GGG | 0.425114 | 5.2:-36441103 | MS.gene063977:CDS |
| AACTCTATCCGCATCAGTTA+CGG | 0.428093 | 5.2:+36441576 | None:intergenic |
| ACATACTTGTCCCTGATTAA+CGG | 0.428702 | 5.2:-36440638 | MS.gene063977:CDS |
| TCTTGATGAGATGAATGCTT+TGG | 0.429748 | 5.2:-36441104 | MS.gene063977:CDS |
| CTCTGTTTAGGGACATGAGA+GGG | 0.436667 | 5.2:-36440898 | MS.gene063977:CDS |
| AACTGCGGAGGCTACTCTAT+TGG | 0.438932 | 5.2:-36441020 | MS.gene063977:CDS |
| AAACCAAAACTAAACTCATC+TGG | 0.447180 | 5.2:+36441523 | None:intergenic |
| AGTTAAGGAATATCTTCATA+AGG | 0.447351 | 5.2:-36441266 | MS.gene063977:CDS |
| GTTAATGCTTGTGTTAGTAT+TGG | 0.447831 | 5.2:-36441151 | MS.gene063977:CDS |
| ACACCGCCCCACCAATGAAA+AGG | 0.449893 | 5.2:+36441757 | None:intergenic |
| CCGCATCAGTTACGGATTCA+AGG | 0.453366 | 5.2:+36441584 | None:intergenic |
| TCTTGCATCTTCTAGCCTCC+CGG | 0.455695 | 5.2:+36440709 | None:intergenic |
| ATCAAAGTTGACGAGTCTAT+AGG | 0.458638 | 5.2:-36441184 | MS.gene063977:CDS |
| GTCTGCTAATTTAGTTTCTG+TGG | 0.461296 | 5.2:-36441371 | MS.gene063977:CDS |
| AATGCTTTGGGAGGCTCTGT+GGG | 0.462220 | 5.2:-36441091 | MS.gene063977:CDS |
| GTGACGGAGATAAGTAGTTC+AGG | 0.463218 | 5.2:-36440998 | MS.gene063977:CDS |
| GAATTACAAGCAGCAACATC+AGG | 0.464759 | 5.2:+36441631 | None:intergenic |
| TTGAGGTAGGTACTCATGAT+TGG | 0.467602 | 5.2:-36440760 | MS.gene063977:CDS |
| CGAGGGTTCTTGATTTGAAA+GGG | 0.470046 | 5.2:-36440874 | MS.gene063977:CDS |
| ACTGATGCGGATAGAGTTGT+TGG | 0.475556 | 5.2:-36441571 | MS.gene063977:CDS |
| CTGAAAGTCTTGACCGGACA+TGG | 0.478163 | 5.2:+36440931 | None:intergenic |
| GTTAAGGAATATCTTCATAA+GGG | 0.479601 | 5.2:-36441265 | MS.gene063977:CDS |
| TTGCAGTAAGCTTTCAAGAT+CGG | 0.484880 | 5.2:+36441052 | None:intergenic |
| TATGCACTTAAAGGGTTACA+AGG | 0.491051 | 5.2:-36441487 | MS.gene063977:CDS |
| GGTTGCTTTGGATGACAAGC+TGG | 0.491271 | 5.2:-36441665 | MS.gene063977:CDS |
| ATTGCTTTCAAGAATTGGGC+TGG | 0.497828 | 5.2:-36440320 | MS.gene063977:CDS |
| ATCTGGCTTAACACCAAGCT+TGG | 0.499272 | 5.2:+36441540 | None:intergenic |
| TTTCTTAGATGAGGTGGTAG+AGG | 0.503852 | 5.2:-36440792 | MS.gene063977:CDS |
| GAACCATCGACCTGAGTTGA+TGG | 0.506113 | 5.2:-36440819 | MS.gene063977:CDS |
| GGCTGCTTTCTTAGATGAGG+TGG | 0.511399 | 5.2:-36440798 | MS.gene063977:CDS |
| CACCGCCCCACCAATGAAAA+GGG | 0.511917 | 5.2:+36441758 | None:intergenic |
| TAATCAGGGACAAGTATGTC+TGG | 0.515514 | 5.2:+36440642 | None:intergenic |
| CTCCTTTGACCATAGCATAC+AGG | 0.517653 | 5.2:+36440498 | None:intergenic |
| GAATGCTTTGGGAGGCTCTG+TGG | 0.523683 | 5.2:-36441092 | MS.gene063977:CDS |
| TAGGGACATGAGAGGGGCGA+GGG | 0.531432 | 5.2:-36440891 | MS.gene063977:CDS |
| TTAGGGACATGAGAGGGGCG+AGG | 0.535492 | 5.2:-36440892 | MS.gene063977:CDS |
| CTAATAGAAACATCCATGTC+CGG | 0.537039 | 5.2:-36440944 | MS.gene063977:CDS |
| GCGAGGGTTCTTGATTTGAA+AGG | 0.543509 | 5.2:-36440875 | MS.gene063977:CDS |
| AATGAAAAGGGATAAAGAAA+CGG | 0.553013 | 5.2:+36441770 | None:intergenic |
| AAGTAGTTCAGGTCTAAAGT+TGG | 0.559965 | 5.2:-36440987 | MS.gene063977:CDS |
| TTCCTGTATGCTATGGTCAA+AGG | 0.564937 | 5.2:-36440500 | MS.gene063977:CDS |
| GGTAGAGGATCCTCGTATTG+AGG | 0.569398 | 5.2:-36440777 | MS.gene063977:CDS |
| GTTGGAATTATGTCCAAGCT+TGG | 0.570246 | 5.2:-36441553 | MS.gene063977:CDS |
| CCTTGAATCCGTAACTGATG+CGG | 0.572129 | 5.2:-36441584 | MS.gene063977:CDS |
| AGTTACTTGACTATAATGAC+AGG | 0.574269 | 5.2:-36440851 | MS.gene063977:CDS |
| GATGGCTGCTTTCTTAGATG+AGG | 0.574433 | 5.2:-36440801 | MS.gene063977:CDS |
| TGATGCATTCCTGTATGCTA+TGG | 0.578318 | 5.2:-36440507 | MS.gene063977:CDS |
| GACCGACTGAAAGTCTTGAC+CGG | 0.581684 | 5.2:+36440925 | None:intergenic |
| AAGAAAGCAGCCATCAACTC+AGG | 0.583919 | 5.2:+36440809 | None:intergenic |
| GAGGTTAAGAGAAAGTTAGC+GGG | 0.585709 | 5.2:-36440569 | MS.gene063977:CDS |
| GTGTGCTTGTTGATATTGCT+AGG | 0.590445 | 5.2:-36441738 | MS.gene063977:CDS |
| TTCAGGTCTAAAGTTGGACG+TGG | 0.606771 | 5.2:-36440981 | MS.gene063977:CDS |
| CAGCCATCAACTCAGGTCGA+TGG | 0.606962 | 5.2:+36440816 | None:intergenic |
| TCTCTGTTTAGGGACATGAG+AGG | 0.609112 | 5.2:-36440899 | MS.gene063977:CDS |
| TGATGCTGTGATGCAAGTTG+TGG | 0.610490 | 5.2:-36440468 | MS.gene063977:CDS |
| CTGTATGCTATGGTCAAAGG+AGG | 0.610526 | 5.2:-36440497 | MS.gene063977:CDS |
| GATGAGATGAATGCTTTGGG+AGG | 0.611114 | 5.2:-36441100 | MS.gene063977:CDS |
| CGAGGTTAAGAGAAAGTTAG+CGG | 0.617178 | 5.2:-36440570 | MS.gene063977:CDS |
| GAGGATCCTCGTATTGAGGT+AGG | 0.619738 | 5.2:-36440773 | MS.gene063977:CDS |
| TGTAATGATGTTGTGGAACG+AGG | 0.624533 | 5.2:-36440588 | MS.gene063977:CDS |
| TCTGTTTAGGGACATGAGAG+GGG | 0.625777 | 5.2:-36440897 | MS.gene063977:CDS |
| CGAAACATATCCGTTAATCA+GGG | 0.628051 | 5.2:+36440628 | None:intergenic |
| GGAGGCTACTCTATTGGTGA+CGG | 0.634065 | 5.2:-36441014 | MS.gene063977:CDS |
| GTCCGGTCAAGACTTTCAGT+CGG | 0.642135 | 5.2:-36440927 | MS.gene063977:CDS |
| CAAAGAGAATCGAACTGCGG+AGG | 0.652528 | 5.2:-36441032 | MS.gene063977:CDS |
| AGGTTAAGAGAAAGTTAGCG+GGG | 0.663255 | 5.2:-36440568 | MS.gene063977:CDS |
| GGTTAAGAGAAAGTTAGCGG+GGG | 0.720845 | 5.2:-36440567 | MS.gene063977:CDS |
| CTGCAAAGAGAATCGAACTG+CGG | 0.726664 | 5.2:-36441035 | MS.gene063977:CDS |
| TGAGTACCTACCTCAATACG+AGG | 0.748508 | 5.2:+36440767 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAAACATTTATTGTTTT+TGG | + | chr5.2:36440719-36440738 | None:intergenic | 10.0% |
| !!! | CATTACATCAAAATATTTTT+CGG | + | chr5.2:36441535-36441554 | None:intergenic | 15.0% |
| !!! | TTTTATTCTAATTTGATTAC+TGG | - | chr5.2:36440733-36440752 | MS.gene063977:CDS | 15.0% |
| !! | CTTATTTATATGCACTTAAA+GGG | - | chr5.2:36440641-36440660 | MS.gene063977:CDS | 20.0% |
| !!! | TGAAAATATTTGTTGATAAG+TGG | - | chr5.2:36441706-36441725 | MS.gene063977:CDS | 20.0% |
| ! | AATGAAAAGGGATAAAGAAA+CGG | + | chr5.2:36440369-36440388 | None:intergenic | 25.0% |
| ! | AGTTAAGGAATATCTTCATA+AGG | - | chr5.2:36440870-36440889 | MS.gene063977:CDS | 25.0% |
| ! | CTTCATAAGGGAAATATTAA+GGG | - | chr5.2:36440883-36440902 | MS.gene063977:CDS | 25.0% |
| ! | GAAAAAGAATGTCAGAAAAA+TGG | - | chr5.2:36441785-36441804 | MS.gene063977:CDS | 25.0% |
| ! | GCTTATTTATATGCACTTAA+AGG | - | chr5.2:36440640-36440659 | MS.gene063977:CDS | 25.0% |
| ! | GTTAAGGAATATCTTCATAA+GGG | - | chr5.2:36440871-36440890 | MS.gene063977:CDS | 25.0% |
| ! | TCTTATTGCTTTCAAGAATT+GGG | - | chr5.2:36441812-36441831 | MS.gene063977:CDS | 25.0% |
| ! | TCTTCATAAGGGAAATATTA+AGG | - | chr5.2:36440882-36440901 | MS.gene063977:CDS | 25.0% |
| !!! | ATTTTGATGTAATGATGTTG+TGG | - | chr5.2:36441541-36441560 | MS.gene063977:CDS | 25.0% |
| !!! | CAAATTTGGAATTTTGATAG+AGG | - | chr5.2:36440832-36440851 | MS.gene063977:CDS | 25.0% |
| !!! | CACTTTTTGTTTAGTAGTTA+AGG | - | chr5.2:36440855-36440874 | MS.gene063977:CDS | 25.0% |
| AAACCAAAACTAAACTCATC+TGG | + | chr5.2:36440616-36440635 | None:intergenic | 30.0% | |
| AGTTACTTGACTATAATGAC+AGG | - | chr5.2:36441285-36441304 | MS.gene063977:CDS | 30.0% | |
| CTCTTATTGCTTTCAAGAAT+TGG | - | chr5.2:36441811-36441830 | MS.gene063977:CDS | 30.0% | |
| GAGATGATGACAAACAAATT+TGG | - | chr5.2:36440818-36440837 | MS.gene063977:CDS | 30.0% | |
| GATTATTGAAGCTCAGAAAT+TGG | - | chr5.2:36440918-36440937 | MS.gene063977:CDS | 30.0% | |
| GTTAATGCTTGTGTTAGTAT+TGG | - | chr5.2:36440985-36441004 | MS.gene063977:CDS | 30.0% | |
| ! | ATGCAAGAAGAACTTTTAGA+AGG | - | chr5.2:36441442-36441461 | MS.gene063977:CDS | 30.0% |
| ! | GACATTCTTTTTCCTTAATC+TGG | + | chr5.2:36441778-36441797 | None:intergenic | 30.0% |
| ! | GTTTCTTTATCCCTTTTCAT+TGG | - | chr5.2:36440368-36440387 | MS.gene063977:CDS | 30.0% |
| ! | TGTTTCTATTAGAGCATCAT+AGG | + | chr5.2:36441184-36441203 | None:intergenic | 30.0% |
| !! | AAAGTTTTGATGCTTGGTTT+TGG | - | chr5.2:36440688-36440707 | MS.gene063977:CDS | 30.0% |
| !! | GAGTTAAAAGTTTTGATGCT+TGG | - | chr5.2:36440682-36440701 | MS.gene063977:CDS | 30.0% |
| AAAGAGGTAAAAAAGCAGCA+AGG | + | chr5.2:36440435-36440454 | None:intergenic | 35.0% | |
| ACATACTTGTCCCTGATTAA+CGG | - | chr5.2:36441498-36441517 | MS.gene063977:CDS | 35.0% | |
| ATCAAAGTTGACGAGTCTAT+AGG | - | chr5.2:36440952-36440971 | MS.gene063977:CDS | 35.0% | |
| ATCTGACAAGTGAAAAAGCA+GGG | + | chr5.2:36440333-36440352 | None:intergenic | 35.0% | |
| CGAAACATATCCGTTAATCA+GGG | + | chr5.2:36441511-36441530 | None:intergenic | 35.0% | |
| CTAATAGAAACATCCATGTC+CGG | - | chr5.2:36441192-36441211 | MS.gene063977:CDS | 35.0% | |
| CTTGATGAGATGAATGCTTT+GGG | - | chr5.2:36441033-36441052 | MS.gene063977:CDS | 35.0% | |
| GACACATAAAAAGCTCAAAG+TGG | - | chr5.2:36441752-36441771 | MS.gene063977:CDS | 35.0% | |
| GACTATAATGACAGGTTTGA+TGG | - | chr5.2:36441293-36441312 | MS.gene063977:CDS | 35.0% | |
| GATCAAATTTGACCAGAATC+TGG | - | chr5.2:36441605-36441624 | MS.gene063977:CDS | 35.0% | |
| TATGCACTTAAAGGGTTACA+AGG | - | chr5.2:36440649-36440668 | MS.gene063977:CDS | 35.0% | |
| TCTTGATGAGATGAATGCTT+TGG | - | chr5.2:36441032-36441051 | MS.gene063977:CDS | 35.0% | |
| TGGTCAAATTTGATCTCCTT+CGG | + | chr5.2:36441600-36441619 | None:intergenic | 35.0% | |
| TTGCAGTAAGCTTTCAAGAT+CGG | + | chr5.2:36441087-36441106 | None:intergenic | 35.0% | |
| ! | AAGTAGTTCAGGTCTAAAGT+TGG | - | chr5.2:36441149-36441168 | MS.gene063977:CDS | 35.0% |
| ! | CCTGATTAACGGATATGTTT+CGG | - | chr5.2:36441509-36441528 | MS.gene063977:CDS | 35.0% |
| ! | CTTTATCCCTTTTCATTGGT+GGG | - | chr5.2:36440372-36440391 | MS.gene063977:CDS | 35.0% |
| ! | GTCTGCTAATTTAGTTTCTG+TGG | - | chr5.2:36440765-36440784 | MS.gene063977:CDS | 35.0% |
| ! | TCTTTATCCCTTTTCATTGG+TGG | - | chr5.2:36440371-36440390 | MS.gene063977:CDS | 35.0% |
| ! | TTTATCCCTTTTCATTGGTG+GGG | - | chr5.2:36440373-36440392 | MS.gene063977:CDS | 35.0% |
| !! | AAGCCAGATGAGTTTAGTTT+TGG | - | chr5.2:36440610-36440629 | MS.gene063977:CDS | 35.0% |
| !! | TCTTTTTGAAGACAACTGCA+GGG | - | chr5.2:36440450-36440469 | MS.gene063977:CDS | 35.0% |
| AACTCTATCCGCATCAGTTA+CGG | + | chr5.2:36440563-36440582 | None:intergenic | 40.0% | |
| AGGTTAAGAGAAAGTTAGCG+GGG | - | chr5.2:36441568-36441587 | MS.gene063977:CDS | 40.0% | |
| ATTGCTTTCAAGAATTGGGC+TGG | - | chr5.2:36441816-36441835 | MS.gene063977:CDS | 40.0% | |
| CCGAAACATATCCGTTAATC+AGG | + | chr5.2:36441512-36441531 | None:intergenic | 40.0% | |
| CGAGGTTAAGAGAAAGTTAG+CGG | - | chr5.2:36441566-36441585 | MS.gene063977:CDS | 40.0% | |
| CTGCAGTTGTCTTCAAAAAG+AGG | + | chr5.2:36440451-36440470 | None:intergenic | 40.0% | |
| GAATTACAAGCAGCAACATC+AGG | + | chr5.2:36440508-36440527 | None:intergenic | 40.0% | |
| GACAAGTATGTCTGGTCATT+CGG | + | chr5.2:36441489-36441508 | None:intergenic | 40.0% | |
| GAGGTTAAGAGAAAGTTAGC+GGG | - | chr5.2:36441567-36441586 | MS.gene063977:CDS | 40.0% | |
| GATCTGACAAGTGAAAAAGC+AGG | + | chr5.2:36440334-36440353 | None:intergenic | 40.0% | |
| GTTGGAATTATGTCCAAGCT+TGG | - | chr5.2:36440583-36440602 | MS.gene063977:CDS | 40.0% | |
| TAATCAGGGACAAGTATGTC+TGG | + | chr5.2:36441497-36441516 | None:intergenic | 40.0% | |
| TCTGACAAGTGAAAAAGCAG+GGG | + | chr5.2:36440332-36440351 | None:intergenic | 40.0% | |
| TGATGCATTCCTGTATGCTA+TGG | - | chr5.2:36441629-36441648 | MS.gene063977:CDS | 40.0% | |
| TGTAATGATGTTGTGGAACG+AGG | - | chr5.2:36441548-36441567 | MS.gene063977:CDS | 40.0% | |
| TTCCTGTATGCTATGGTCAA+AGG | - | chr5.2:36441636-36441655 | MS.gene063977:CDS | 40.0% | |
| TTGAGGTAGGTACTCATGAT+TGG | - | chr5.2:36441376-36441395 | MS.gene063977:CDS | 40.0% | |
| TTTCTTAGATGAGGTGGTAG+AGG | - | chr5.2:36441344-36441363 | MS.gene063977:CDS | 40.0% | |
| ! | AGTCGGTCTTTTCTCTGTTT+AGG | - | chr5.2:36441226-36441245 | MS.gene063977:CDS | 40.0% |
| ! | CGAGGGTTCTTGATTTGAAA+GGG | - | chr5.2:36441262-36441281 | MS.gene063977:CDS | 40.0% |
| ! | GTCGGTCTTTTCTCTGTTTA+GGG | - | chr5.2:36441227-36441246 | MS.gene063977:CDS | 40.0% |
| ! | GTGTGCTTGTTGATATTGCT+AGG | - | chr5.2:36440398-36440417 | MS.gene063977:CDS | 40.0% |
| ! | GTTGACGAGTCTATAGGTTT+TGG | - | chr5.2:36440958-36440977 | MS.gene063977:CDS | 40.0% |
| !! | ATCCACGCTTTTTGTAAAGC+CGG | - | chr5.2:36441408-36441427 | MS.gene063977:CDS | 40.0% |
| !! | CTCTTTTTGAAGACAACTGC+AGG | - | chr5.2:36440449-36440468 | MS.gene063977:CDS | 40.0% |
| AAGAAAGCAGCCATCAACTC+AGG | + | chr5.2:36441330-36441349 | None:intergenic | 45.0% | |
| ACTGATGCGGATAGAGTTGT+TGG | - | chr5.2:36440565-36440584 | MS.gene063977:CDS | 45.0% | |
| AGCTCAAAGTGGCCAGATTA+AGG | - | chr5.2:36441763-36441782 | MS.gene063977:CDS | 45.0% | |
| CCTTGAATCCGTAACTGATG+CGG | - | chr5.2:36440552-36440571 | MS.gene063977:CDS | 45.0% | |
| CTCCTTTGACCATAGCATAC+AGG | + | chr5.2:36441641-36441660 | None:intergenic | 45.0% | |
| CTCTGTTTAGGGACATGAGA+GGG | - | chr5.2:36441238-36441257 | MS.gene063977:CDS | 45.0% | |
| CTGACAAGTGAAAAAGCAGG+GGG | + | chr5.2:36440331-36440350 | None:intergenic | 45.0% | |
| CTGCAAAGAGAATCGAACTG+CGG | - | chr5.2:36441101-36441120 | MS.gene063977:CDS | 45.0% | |
| CTGTATGCTATGGTCAAAGG+AGG | - | chr5.2:36441639-36441658 | MS.gene063977:CDS | 45.0% | |
| GAGATACAAGCAAGCGTTCA+TGG | - | chr5.2:36441728-36441747 | MS.gene063977:CDS | 45.0% | |
| GGAATGCATCAACCAGATTC+TGG | + | chr5.2:36441620-36441639 | None:intergenic | 45.0% | |
| GGATTCAAGGCAAAAACAGC+AGG | + | chr5.2:36440542-36440561 | None:intergenic | 45.0% | |
| GGTTAAGAGAAAGTTAGCGG+GGG | - | chr5.2:36441569-36441588 | MS.gene063977:CDS | 45.0% | |
| TCTCTGTTTAGGGACATGAG+AGG | - | chr5.2:36441237-36441256 | MS.gene063977:CDS | 45.0% | |
| TCTGTTTAGGGACATGAGAG+GGG | - | chr5.2:36441239-36441258 | MS.gene063977:CDS | 45.0% | |
| TGAGTACCTACCTCAATACG+AGG | + | chr5.2:36441372-36441391 | None:intergenic | 45.0% | |
| TGATGCTGTGATGCAAGTTG+TGG | - | chr5.2:36441668-36441687 | MS.gene063977:CDS | 45.0% | |
| ! | ATCTGGCTTAACACCAAGCT+TGG | + | chr5.2:36440599-36440618 | None:intergenic | 45.0% |
| ! | GATGAGATGAATGCTTTGGG+AGG | - | chr5.2:36441036-36441055 | MS.gene063977:CDS | 45.0% |
| ! | GATGGCTGCTTTCTTAGATG+AGG | - | chr5.2:36441335-36441354 | MS.gene063977:CDS | 45.0% |
| ! | GCGAGGGTTCTTGATTTGAA+AGG | - | chr5.2:36441261-36441280 | MS.gene063977:CDS | 45.0% |
| ! | GTGACGGAGATAAGTAGTTC+AGG | - | chr5.2:36441138-36441157 | MS.gene063977:CDS | 45.0% |
| ! | TTCAGGTCTAAAGTTGGACG+TGG | - | chr5.2:36441155-36441174 | MS.gene063977:CDS | 45.0% |
| !! | TCCACGCTTTTTGTAAAGCC+GGG | - | chr5.2:36441409-36441428 | MS.gene063977:CDS | 45.0% |
| AACTGCGGAGGCTACTCTAT+TGG | - | chr5.2:36441116-36441135 | MS.gene063977:CDS | 50.0% | |
| AAGAGAAAGTTAGCGGGGGA+TGG | - | chr5.2:36441573-36441592 | MS.gene063977:CDS | 50.0% | |
| AGACAACTGCAGGGTTGCTT+TGG | - | chr5.2:36440459-36440478 | MS.gene063977:CDS | 50.0% | |
| AGAGAAAGTTAGCGGGGGAT+GGG | - | chr5.2:36441574-36441593 | MS.gene063977:CDS | 50.0% | |
| CAAAGAGAATCGAACTGCGG+AGG | - | chr5.2:36441104-36441123 | MS.gene063977:CDS | 50.0% | |
| CCGCATCAGTTACGGATTCA+AGG | + | chr5.2:36440555-36440574 | None:intergenic | 50.0% | |
| CTGAAAGTCTTGACCGGACA+TGG | + | chr5.2:36441208-36441227 | None:intergenic | 50.0% | |
| GACCGACTGAAAGTCTTGAC+CGG | + | chr5.2:36441214-36441233 | None:intergenic | 50.0% | |
| GAGGATCCTCGTATTGAGGT+AGG | - | chr5.2:36441363-36441382 | MS.gene063977:CDS | 50.0% | |
| GGAGGCTACTCTATTGGTGA+CGG | - | chr5.2:36441122-36441141 | MS.gene063977:CDS | 50.0% | |
| GGTAGAGGATCCTCGTATTG+AGG | - | chr5.2:36441359-36441378 | MS.gene063977:CDS | 50.0% | |
| GGTCATTCGGCTCAAATTGC+AGG | + | chr5.2:36441476-36441495 | None:intergenic | 50.0% | |
| GTCCGGTCAAGACTTTCAGT+CGG | - | chr5.2:36441209-36441228 | MS.gene063977:CDS | 50.0% | |
| TCCCGGCTTTACAAAAAGCG+TGG | + | chr5.2:36441413-36441432 | None:intergenic | 50.0% | |
| TCTTGCATCTTCTAGCCTCC+CGG | + | chr5.2:36441430-36441449 | None:intergenic | 50.0% | |
| ! | ATCCCTTTTCATTGGTGGGG+CGG | - | chr5.2:36440376-36440395 | MS.gene063977:CDS | 50.0% |
| ! | GAACCATCGACCTGAGTTGA+TGG | - | chr5.2:36441317-36441336 | MS.gene063977:CDS | 50.0% |
| ! | GGCTGCTTTCTTAGATGAGG+TGG | - | chr5.2:36441338-36441357 | MS.gene063977:CDS | 50.0% |
| ! | GGTTGCTTTGGATGACAAGC+TGG | - | chr5.2:36440471-36440490 | MS.gene063977:CDS | 50.0% |
| !! | AATGCTTTGGGAGGCTCTGT+GGG | - | chr5.2:36441045-36441064 | MS.gene063977:CDS | 50.0% |
| !! | ACGCTTTTTGTAAAGCCGGG+AGG | - | chr5.2:36441412-36441431 | MS.gene063977:CDS | 50.0% |
| AAAAGCAGGGGGAGCAGTGT+TGG | + | chr5.2:36440320-36440339 | None:intergenic | 55.0% | |
| ACACCGCCCCACCAATGAAA+AGG | + | chr5.2:36440382-36440401 | None:intergenic | 55.0% | |
| CACCGCCCCACCAATGAAAA+GGG | + | chr5.2:36440381-36440400 | None:intergenic | 55.0% | |
| CAGCCATCAACTCAGGTCGA+TGG | + | chr5.2:36441323-36441342 | None:intergenic | 55.0% | |
| !! | GAATGCTTTGGGAGGCTCTG+TGG | - | chr5.2:36441044-36441063 | MS.gene063977:CDS | 55.0% |
| TAGGGACATGAGAGGGGCGA+GGG | - | chr5.2:36441245-36441264 | MS.gene063977:CDS | 60.0% | |
| TGGGAGGCTCTGTGGGTCTT+GGG | - | chr5.2:36441052-36441071 | MS.gene063977:CDS | 60.0% | |
| TTAGGGACATGAGAGGGGCG+AGG | - | chr5.2:36441244-36441263 | MS.gene063977:CDS | 60.0% | |
| TTGGGAGGCTCTGTGGGTCT+TGG | - | chr5.2:36441051-36441070 | MS.gene063977:CDS | 60.0% | |
| GGGAGGCTCTGTGGGTCTTG+GGG | - | chr5.2:36441053-36441072 | MS.gene063977:CDS | 65.0% | |
| ! | AGCAGGGGGAGCAGTGTTGG+CGG | + | chr5.2:36440317-36440336 | None:intergenic | 65.0% |
| GTTAGCGGGGGATGGGCCGA+AGG | - | chr5.2:36441581-36441600 | MS.gene063977:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 36440307 | 36441851 | 36440307 | ID=MS.gene063977 |
| chr5.2 | mRNA | 36440307 | 36441851 | 36440307 | ID=MS.gene063977.t1;Parent=MS.gene063977 |
| chr5.2 | exon | 36440307 | 36441851 | 36440307 | ID=MS.gene063977.t1.exon1;Parent=MS.gene063977.t1 |
| chr5.2 | CDS | 36440307 | 36441851 | 36440307 | ID=cds.MS.gene063977.t1;Parent=MS.gene063977.t1 |
| Gene Sequence |
| Protein sequence |
