Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064143.t1 | XP_003609880.1 | 99 | 625 | 5 | 1 | 1 | 625 | 1 | 624 | 0.00E+00 | 1245.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064143.t1 | Q54XC1 | 28.8 | 528 | 303 | 9 | 119 | 604 | 86 | 582 | 4.9e-58 | 227.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064143.t1 | G7JR10 | 99.0 | 625 | 5 | 1 | 1 | 625 | 1 | 624 | 0.0e+00 | 1245.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064143 | MS.gene064666 | PPI |
| MS.gene064143 | MS.gene014516 | PPI |
| MS.gene064143 | MS.gene42341 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064143.t1 | MTR_4g123980 | 99.040 | 625 | 5 | 1 | 1 | 625 | 1 | 624 | 0.0 | 1287 |
| MS.gene064143.t1 | MTR_4g123980 | 92.320 | 625 | 5 | 2 | 1 | 625 | 1 | 582 | 0.0 | 1179 |
| MS.gene064143.t1 | MTR_5g082530 | 31.599 | 519 | 296 | 14 | 122 | 603 | 10 | 506 | 4.03e-71 | 239 |
| MS.gene064143.t1 | MTR_3g111870 | 31.569 | 510 | 307 | 12 | 125 | 603 | 32 | 530 | 7.50e-70 | 237 |
| MS.gene064143.t1 | MTR_1g022260 | 31.648 | 534 | 314 | 12 | 108 | 603 | 93 | 613 | 4.07e-65 | 225 |
| MS.gene064143.t1 | MTR_4g129920 | 27.767 | 497 | 314 | 13 | 104 | 589 | 54 | 516 | 6.65e-45 | 168 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064143.t1 | AT5G48960 | 83.636 | 550 | 90 | 0 | 55 | 604 | 84 | 633 | 0.0 | 971 |
| MS.gene064143.t1 | AT1G75210 | 28.708 | 627 | 377 | 17 | 18 | 603 | 39 | 636 | 1.39e-69 | 238 |
| MS.gene064143.t1 | AT1G75210 | 30.292 | 548 | 320 | 15 | 97 | 603 | 7 | 533 | 1.41e-69 | 235 |
| MS.gene064143.t1 | AT1G75210 | 30.292 | 548 | 320 | 15 | 97 | 603 | 7 | 533 | 1.41e-69 | 235 |
| MS.gene064143.t1 | AT2G23890 | 27.655 | 499 | 312 | 16 | 104 | 589 | 65 | 527 | 1.29e-44 | 167 |
| MS.gene064143.t1 | AT2G23890 | 27.623 | 467 | 295 | 13 | 132 | 589 | 5 | 437 | 2.03e-44 | 165 |
| MS.gene064143.t1 | AT2G23890 | 26.718 | 524 | 310 | 16 | 104 | 589 | 65 | 552 | 3.27e-41 | 158 |
Find 171 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGGAAAACCTTAAGAATA+TGG | 0.187472 | 8.4:+10893325 | MS.gene064143:CDS |
| TAGATTCCTTCCAAATGATA+TGG | 0.214715 | 8.4:+10895009 | MS.gene064143:CDS |
| AGAGTTACCTTTGGCACTTT+TGG | 0.268992 | 8.4:+10894822 | MS.gene064143:CDS |
| CTTGAACAGCTTGAGGCTTT+TGG | 0.288352 | 8.4:+10891737 | MS.gene064143:CDS |
| AGCTCGAGTAGATAACATTT+TGG | 0.302975 | 8.4:-10893574 | None:intergenic |
| GAAGGAGTTGGTGATGGTGG+TGG | 0.319994 | 8.4:-10891537 | None:intergenic |
| CTCTCCATGTTCGCCGTTCA+CGG | 0.333540 | 8.4:+10891500 | MS.gene064143:CDS |
| CTTGGTCCCCTTGATTATAA+AGG | 0.336443 | 8.4:+10894532 | MS.gene064143:CDS |
| TGATTATAAAGGTCTTTATA+AGG | 0.336485 | 8.4:+10894543 | MS.gene064143:CDS |
| CGACAAAGTGTCAGAGGTTT+GGG | 0.340066 | 8.4:-10891602 | None:intergenic |
| TAAATTGTTCAGGTAATTAG+AGG | 0.342453 | 8.4:+10893474 | MS.gene064143:intron |
| GAAAGTCGGAGTTGGTAATA+AGG | 0.347407 | 8.4:-10894952 | None:intergenic |
| CAGGGAAGCCCATATTCTTA+AGG | 0.349883 | 8.4:-10893334 | None:intergenic |
| CATACATGGGGCTTGATGTT+TGG | 0.359037 | 8.4:-10895247 | None:intergenic |
| GACTGACATCGGTGTAAATA+TGG | 0.369410 | 8.4:-10897741 | None:intergenic |
| GCTAAAAGACTTGGGCATTC+CGG | 0.369918 | 8.4:+10892370 | MS.gene064143:CDS |
| AAGGAGTTGGTGATGGTGGT+GGG | 0.374495 | 8.4:-10891536 | None:intergenic |
| TTCTGCAGGTGGTCTGTACT+CGG | 0.379962 | 8.4:+10897651 | MS.gene064143:intron |
| ACGACAAAGTGTCAGAGGTT+TGG | 0.381657 | 8.4:-10891603 | None:intergenic |
| TTGGTTAAAGCTGACCGATT+TGG | 0.384717 | 8.4:+10893525 | MS.gene064143:CDS |
| ATTTCAGATGGTTGACAGAT+TGG | 0.385670 | 8.4:+10894486 | MS.gene064143:intron |
| ATGCTGATATTTATACATCT+AGG | 0.395774 | 8.4:+10899502 | MS.gene064143:CDS |
| ATGGAAAACCTTAAGAATAT+GGG | 0.403651 | 8.4:+10893326 | MS.gene064143:CDS |
| ACGCTGTTCGCCATCGCAAA+TGG | 0.405032 | 8.4:-10897774 | None:intergenic |
| GGGCAAGTTGACATTGGTGG+TGG | 0.407756 | 8.4:-10891582 | None:intergenic |
| TCAAATGCAAGTCCATCAAC+AGG | 0.409972 | 8.4:-10893353 | None:intergenic |
| TATAAAGACCTTTATAATCA+AGG | 0.414164 | 8.4:-10894540 | None:intergenic |
| AATATGGGCTTCCCTGTTGA+TGG | 0.415915 | 8.4:+10893341 | MS.gene064143:CDS |
| TCCAATGCTGGAGGCGGATG+GGG | 0.419954 | 8.4:+10899121 | MS.gene064143:CDS |
| TTCTATCTCGCGCTGGACTG+TGG | 0.422171 | 8.4:+10899361 | MS.gene064143:CDS |
| TCTGCAGGTGGTCTGTACTC+GGG | 0.422238 | 8.4:+10897652 | MS.gene064143:intron |
| TCTCGCCAACCCATATCATT+TGG | 0.423439 | 8.4:-10895019 | None:intergenic |
| CTTGATGTTTGGAAGAACTC+TGG | 0.428049 | 8.4:-10895236 | None:intergenic |
| TCCCCATCCGCCTCCAGCAT+TGG | 0.439169 | 8.4:-10899122 | None:intergenic |
| CTTCATGTATTTCCGCTCTC+AGG | 0.439716 | 8.4:+10899551 | MS.gene064143:CDS |
| TGTTATCTACTCGAGCTGTT+AGG | 0.441179 | 8.4:+10893580 | MS.gene064143:CDS |
| TCAGGCTCAACAAACTGTTC+AGG | 0.442004 | 8.4:-10894796 | None:intergenic |
| GTATTTCCGCTCTCAGGAAC+AGG | 0.444670 | 8.4:+10899557 | MS.gene064143:CDS |
| GCCAAAGGTAACTCTGGATC+AGG | 0.450953 | 8.4:-10894814 | None:intergenic |
| TGGCACACCTTTCAGGCTGT+TGG | 0.456364 | 8.4:+10894629 | MS.gene064143:intron |
| GCCTGATCCAGAGTTACCTT+TGG | 0.457074 | 8.4:+10894813 | MS.gene064143:CDS |
| GACGTACCATCACATTATAA+TGG | 0.458097 | 8.4:-10892949 | None:intergenic |
| CTGCAGGTGGTCTGTACTCG+GGG | 0.458291 | 8.4:+10897653 | MS.gene064143:intron |
| ATCACCTCGGCAACGAATCA+AGG | 0.462275 | 8.4:-10897982 | None:intergenic |
| AGATTCCTTCCAAATGATAT+GGG | 0.462351 | 8.4:+10895010 | MS.gene064143:CDS |
| CTGAGGTCAATTAGTGCCAT+TGG | 0.466336 | 8.4:+10892902 | MS.gene064143:CDS |
| GCCTGTCACTACTTCATACA+TGG | 0.467141 | 8.4:-10895261 | None:intergenic |
| CTCCAATGCTGGAGGCGGAT+GGG | 0.468100 | 8.4:+10899120 | MS.gene064143:CDS |
| GGGACCATACCGGCAGATCT+TGG | 0.471312 | 8.4:+10894514 | MS.gene064143:CDS |
| GGTAGAGCTTATAAATCAAA+AGG | 0.471884 | 8.4:+10898016 | MS.gene064143:CDS |
| AGACAAAGAGAGAGGGAACT+TGG | 0.471925 | 8.4:+10893506 | MS.gene064143:CDS |
| AGAGAACATATTACCAGATC+AGG | 0.473768 | 8.4:-10893377 | None:intergenic |
| CCGAGGTGATAGAGAATCAT+TGG | 0.475672 | 8.4:+10897995 | MS.gene064143:CDS |
| CTCTCTCTTTGTCTATCACA+AGG | 0.475712 | 8.4:-10893497 | None:intergenic |
| ATGGGGAGCTCTTCAATTCA+AGG | 0.475973 | 8.4:+10899138 | MS.gene064143:CDS |
| ACTTGCATTTGATCCTGATC+TGG | 0.476464 | 8.4:+10893364 | MS.gene064143:CDS |
| CGAGAAAATTGCTCCAATGC+TGG | 0.480613 | 8.4:+10899109 | MS.gene064143:CDS |
| ATAATCCACGTCACACTTGT+TGG | 0.481051 | 8.4:-10891678 | None:intergenic |
| TTTGAAGGAGTTGGTGATGG+TGG | 0.486518 | 8.4:-10891540 | None:intergenic |
| TCTAATGCGTCCATGCTTCA+AGG | 0.486804 | 8.4:+10895289 | MS.gene064143:CDS |
| AGAAGATTTGCTAAAAGACT+TGG | 0.493046 | 8.4:+10892361 | MS.gene064143:CDS |
| ATAAAGACCTTTATAATCAA+GGG | 0.493255 | 8.4:-10894539 | None:intergenic |
| TAATCCACGTCACACTTGTT+GGG | 0.494358 | 8.4:-10891677 | None:intergenic |
| CCCATTGACTCTCCTTTCGC+AGG | 0.496558 | 8.4:-10894080 | None:intergenic |
| TCTATCTCGCGCTGGACTGT+GGG | 0.500080 | 8.4:+10899362 | MS.gene064143:CDS |
| TTTGGGCAAGTTGACATTGG+TGG | 0.500792 | 8.4:-10891585 | None:intergenic |
| GCGTGCTTATGACTATTGTA+TGG | 0.501991 | 8.4:+10893307 | MS.gene064143:CDS |
| ACCTGCGAAAGGAGAGTCAA+TGG | 0.503886 | 8.4:+10894079 | MS.gene064143:CDS |
| TCATGTTGAAGGTCGTCTTA+AGG | 0.505507 | 8.4:+10894670 | MS.gene064143:CDS |
| GGCAAGTTGACATTGGTGGT+GGG | 0.508123 | 8.4:-10891581 | None:intergenic |
| AAAAGTGCCAAAGGTAACTC+TGG | 0.509325 | 8.4:-10894820 | None:intergenic |
| GGACCAAAACTTACTTGAGC+AGG | 0.513923 | 8.4:-10898101 | None:intergenic |
| ATAAATCAAAAGGAAGTTGT+GGG | 0.520344 | 8.4:+10898026 | MS.gene064143:CDS |
| TATAAATCAAAAGGAAGTTG+TGG | 0.521533 | 8.4:+10898025 | MS.gene064143:CDS |
| TGAAGGTCCGATCGAGGAAG+TGG | 0.522632 | 8.4:+10892316 | MS.gene064143:CDS |
| TTGTAGAGAACTTGAAGATG+AGG | 0.522798 | 8.4:+10897801 | MS.gene064143:CDS |
| GCTCCAATGCTGGAGGCGGA+TGG | 0.523158 | 8.4:+10899119 | MS.gene064143:CDS |
| TCCTTCCAAATGATATGGGT+TGG | 0.523213 | 8.4:+10895014 | MS.gene064143:CDS |
| TGCTGATATTTATACATCTA+GGG | 0.525292 | 8.4:+10899503 | MS.gene064143:CDS |
| CAAATGGTTGAAAATTCTCT+AGG | 0.528698 | 8.4:+10897685 | MS.gene064143:CDS |
| GGGACCAAGATCTGCCGGTA+TGG | 0.529438 | 8.4:-10894518 | None:intergenic |
| TGAAGCAGTGGCCTACATGC+AGG | 0.529942 | 8.4:+10894131 | MS.gene064143:CDS |
| CGAGGAAGTGGCTAGAATAG+AGG | 0.533529 | 8.4:+10892328 | MS.gene064143:CDS |
| ATTGGTGATGCTGCATTTGA+AGG | 0.535973 | 8.4:+10892299 | MS.gene064143:CDS |
| ATCCATGTTAGTTGCTGCAA+GGG | 0.537926 | 8.4:-10899030 | None:intergenic |
| GAAAATTCTCTAGGAATCCA+TGG | 0.541230 | 8.4:+10897694 | MS.gene064143:CDS |
| TCTCTTTAACCAACTTCGAC+TGG | 0.541444 | 8.4:+10898052 | MS.gene064143:CDS |
| TGTTAAGCTTGAACAGCTTG+AGG | 0.541724 | 8.4:+10891730 | MS.gene064143:CDS |
| CCAGGTTGAGCCTTGAAGCA+TGG | 0.541981 | 8.4:-10895299 | None:intergenic |
| GTTCTCTGTGTCTGAAGCAG+TGG | 0.543616 | 8.4:+10894119 | MS.gene064143:CDS |
| TGCAATGGAAGTGAGATGTA+TGG | 0.544497 | 8.4:+10894042 | MS.gene064143:intron |
| CCATGCTTCAAGGCTCAACC+TGG | 0.546398 | 8.4:+10895299 | MS.gene064143:CDS |
| GACGCCGTGAACGGCGAACA+TGG | 0.546502 | 8.4:-10891504 | None:intergenic |
| TTTGCAGAGCCAGTCGAAGT+TGG | 0.547896 | 8.4:-10898061 | None:intergenic |
| TTTGTCTGTGTAGTGAAAGT+CGG | 0.549719 | 8.4:-10894966 | None:intergenic |
| AATTGCTCCAATGCTGGAGG+CGG | 0.551496 | 8.4:+10899115 | MS.gene064143:CDS |
| GACCACATCGACGCCGTGAA+CGG | 0.552605 | 8.4:-10891513 | None:intergenic |
| TGAGATGTATGGAAGAGAAC+TGG | 0.554032 | 8.4:+10894053 | MS.gene064143:CDS |
| TTATCTTGGTGAAAGCACTA+AGG | 0.555735 | 8.4:+10891697 | MS.gene064143:CDS |
| CGCCGTTCACGGCGTCGATG+TGG | 0.556998 | 8.4:+10891511 | MS.gene064143:CDS |
| CCATCACATTATAATGGACA+AGG | 0.557042 | 8.4:-10892943 | None:intergenic |
| ATTCTAGCCACTTCCTCGAT+CGG | 0.558857 | 8.4:-10892323 | None:intergenic |
| AATAATGAACTTTCTTCCAA+CGG | 0.564916 | 8.4:+10899725 | MS.gene064143:CDS |
| GAAGATTTGCTAAAAGACTT+GGG | 0.565532 | 8.4:+10892362 | MS.gene064143:CDS |
| CATACAAAATCTCATCTCCA+TGG | 0.565756 | 8.4:-10897711 | None:intergenic |
| AGGAGTTGGTGATGGTGGTG+GGG | 0.566692 | 8.4:-10891535 | None:intergenic |
| TCAAGGGGACCAAGATCTGC+CGG | 0.568445 | 8.4:-10894523 | None:intergenic |
| CTGAGAGCGGAAATACATGA+AGG | 0.569482 | 8.4:-10899550 | None:intergenic |
| CCCATGTATGAAGTAGTGAC+AGG | 0.570886 | 8.4:+10895260 | MS.gene064143:CDS |
| TTCTGATCCAAAAGTGCCAA+AGG | 0.571904 | 8.4:-10894829 | None:intergenic |
| TGGGGATTTCTATCTCGCGC+TGG | 0.572308 | 8.4:+10899354 | MS.gene064143:CDS |
| CCTGCGAAAGGAGAGTCAAT+GGG | 0.572366 | 8.4:+10894080 | MS.gene064143:CDS |
| TAATTACCTGTTCCTGAGAG+CGG | 0.572727 | 8.4:-10899563 | None:intergenic |
| GACTTTAGATTGACTGACAT+CGG | 0.575353 | 8.4:-10897752 | None:intergenic |
| ATGGTTGACAGATTGGATGA+TGG | 0.575408 | 8.4:+10894493 | MS.gene064143:CDS |
| AAGTGTGACGTGGATTATCT+TGG | 0.576216 | 8.4:+10891683 | MS.gene064143:CDS |
| GACCCTTGCAGCAACTAACA+TGG | 0.577624 | 8.4:+10899028 | MS.gene064143:intron |
| ACGCGTGCAGAATATTCCAC+GGG | 0.578052 | 8.4:-10892870 | None:intergenic |
| CATCCATGTTAGTTGCTGCA+AGG | 0.578620 | 8.4:-10899031 | None:intergenic |
| GGCTAGAATAGAGGCTAGAG+AGG | 0.578970 | 8.4:+10892337 | MS.gene064143:CDS |
| TATCTTGGTGAAAGCACTAA+GGG | 0.583087 | 8.4:+10891698 | MS.gene064143:CDS |
| TGCAGGTGGTCTGTACTCGG+GGG | 0.584103 | 8.4:+10897654 | MS.gene064143:intron |
| GCACGCGTACGTTGAATCTG+AGG | 0.585348 | 8.4:+10892885 | MS.gene064143:CDS |
| GGGTGAATTTCTAGATGAAG+AGG | 0.586989 | 8.4:-10892849 | None:intergenic |
| CTGGAACTATAGGCTTGGGA+AGG | 0.587407 | 8.4:+10893284 | MS.gene064143:intron |
| CCTGTCACTACTTCATACAT+GGG | 0.592193 | 8.4:-10895260 | None:intergenic |
| GCCAACCCATATCATTTGGA+AGG | 0.592253 | 8.4:-10895015 | None:intergenic |
| ATTGGATGATGGGACCATAC+CGG | 0.592630 | 8.4:+10894504 | MS.gene064143:CDS |
| AGAACTGGTGGACCTGCGAA+AGG | 0.593804 | 8.4:+10894068 | MS.gene064143:CDS |
| TAAAGACCTTTATAATCAAG+GGG | 0.594282 | 8.4:-10894538 | None:intergenic |
| CCTTGTCCATTATAATGTGA+TGG | 0.594817 | 8.4:+10892943 | MS.gene064143:CDS |
| TGGTTGACAGATTGGATGAT+GGG | 0.595425 | 8.4:+10894494 | MS.gene064143:CDS |
| ACCGTTGACTCTAAGTCCAT+CGG | 0.597098 | 8.4:+10891629 | MS.gene064143:CDS |
| TGTGTAGTGAAAGTCGGAGT+TGG | 0.598547 | 8.4:-10894960 | None:intergenic |
| TGGAACTATAGGCTTGGGAA+GGG | 0.601614 | 8.4:+10893285 | MS.gene064143:intron |
| AGGTTTGGGCAAGTTGACAT+TGG | 0.603601 | 8.4:-10891588 | None:intergenic |
| GGAGAAAACATCACCGCCGA+TGG | 0.604635 | 8.4:-10891645 | None:intergenic |
| GGTGAATTTCTAGATGAAGA+GGG | 0.605541 | 8.4:-10892848 | None:intergenic |
| AACTTCGACTGGCTCTGCAA+AGG | 0.608705 | 8.4:+10898063 | MS.gene064143:CDS |
| ATAGTCCATGTCATATCCAA+TGG | 0.613622 | 8.4:-10892918 | None:intergenic |
| ACACTTGTTGGGAGGCGTGA+CGG | 0.618790 | 8.4:-10891666 | None:intergenic |
| GCCTCCTCACATGTATGCAA+CGG | 0.622993 | 8.4:+10891472 | None:intergenic |
| GTTGCAACATACCTGCATGT+AGG | 0.623453 | 8.4:-10894142 | None:intergenic |
| TACGCGTGCAGAATATTCCA+CGG | 0.624452 | 8.4:-10892871 | None:intergenic |
| TAGTGCCATTGGATATGACA+TGG | 0.626673 | 8.4:+10892913 | MS.gene064143:CDS |
| GCCGATGGACTTAGAGTCAA+CGG | 0.626921 | 8.4:-10891630 | None:intergenic |
| TATGAAGTAGTGACAGGCGA+GGG | 0.628014 | 8.4:+10895266 | MS.gene064143:CDS |
| AATCTAAAGTCCATTTGCGA+TGG | 0.631481 | 8.4:+10897764 | MS.gene064143:CDS |
| GCCTCCCAACAAGTGTGACG+TGG | 0.643903 | 8.4:+10891673 | MS.gene064143:CDS |
| TGCATTTGAAGGTCCGATCG+AGG | 0.645835 | 8.4:+10892310 | MS.gene064143:CDS |
| AGTGCCTTGATTCGTTGCCG+AGG | 0.647545 | 8.4:+10897978 | MS.gene064143:CDS |
| GAAAATTGCTCCAATGCTGG+AGG | 0.647752 | 8.4:+10899112 | MS.gene064143:CDS |
| TGAGAGCGGAAATACATGAA+GGG | 0.652149 | 8.4:-10899549 | None:intergenic |
| CTTGTGATAGACAAAGAGAG+AGG | 0.653071 | 8.4:+10893498 | MS.gene064143:CDS |
| TTGTGATAGACAAAGAGAGA+GGG | 0.657865 | 8.4:+10893499 | MS.gene064143:CDS |
| GTGAATTTCTAGATGAAGAG+GGG | 0.660916 | 8.4:-10892847 | None:intergenic |
| GTGCAACGACAAAGTGTCAG+AGG | 0.662199 | 8.4:-10891608 | None:intergenic |
| TCCACGTCACACTTGTTGGG+AGG | 0.666845 | 8.4:-10891674 | None:intergenic |
| TCATCTAGAAATTCACCCCG+TGG | 0.668363 | 8.4:+10892854 | MS.gene064143:CDS |
| GCAGGTGGTCTGTACTCGGG+GGG | 0.677124 | 8.4:+10897655 | MS.gene064143:intron |
| CCAATGATTCTCTATCACCT+CGG | 0.680632 | 8.4:-10897995 | None:intergenic |
| GTGTGTATGAATCGTGTGCG+AGG | 0.682093 | 8.4:-10899685 | None:intergenic |
| GTATGAAGTAGTGACAGGCG+AGG | 0.683636 | 8.4:+10895265 | MS.gene064143:CDS |
| CAAATGCAAGTCCATCAACA+GGG | 0.684639 | 8.4:-10893352 | None:intergenic |
| CTGTCACTACTTCATACATG+GGG | 0.689870 | 8.4:-10895259 | None:intergenic |
| GATGTATGGAAGAGAACTGG+TGG | 0.697320 | 8.4:+10894056 | MS.gene064143:CDS |
| CATCACATTATAATGGACAA+GGG | 0.698479 | 8.4:-10892942 | None:intergenic |
| ACTACACAGACAAAATGATG+AGG | 0.704274 | 8.4:+10894975 | MS.gene064143:CDS |
| CAAAACTTACTTGAGCAGGA+CGG | 0.709767 | 8.4:-10898097 | None:intergenic |
| GTTGACTCTAAGTCCATCGG+CGG | 0.736350 | 8.4:+10891632 | MS.gene064143:CDS |
| CGCGTGCAGAATATTCCACG+GGG | 0.772588 | 8.4:-10892869 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 10891482 | 10899766 | 10891482 | ID=MS.gene064143 |
| chr8.4 | mRNA | 10891482 | 10899766 | 10891482 | ID=MS.gene064143.t1;Parent=MS.gene064143 |
| chr8.4 | exon | 10891482 | 10891758 | 10891482 | ID=MS.gene064143.t1.exon1;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10891482 | 10891758 | 10891482 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10892297 | 10892391 | 10892297 | ID=MS.gene064143.t1.exon2;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10892297 | 10892391 | 10892297 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10892845 | 10892964 | 10892845 | ID=MS.gene064143.t1.exon3;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10892845 | 10892964 | 10892845 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10893296 | 10893385 | 10893296 | ID=MS.gene064143.t1.exon4;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10893296 | 10893385 | 10893296 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10893486 | 10893601 | 10893486 | ID=MS.gene064143.t1.exon5;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10893486 | 10893601 | 10893486 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10894053 | 10894152 | 10894053 | ID=MS.gene064143.t1.exon6;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10894053 | 10894152 | 10894053 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10894493 | 10894564 | 10894493 | ID=MS.gene064143.t1.exon7;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10894493 | 10894564 | 10894493 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10894644 | 10894691 | 10894644 | ID=MS.gene064143.t1.exon8;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10894644 | 10894691 | 10894644 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10894778 | 10894855 | 10894778 | ID=MS.gene064143.t1.exon9;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10894778 | 10894855 | 10894778 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10894935 | 10895054 | 10894935 | ID=MS.gene064143.t1.exon10;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10894935 | 10895054 | 10894935 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10895215 | 10895320 | 10895215 | ID=MS.gene064143.t1.exon11;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10895215 | 10895320 | 10895215 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10897659 | 10897822 | 10897659 | ID=MS.gene064143.t1.exon12;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10897659 | 10897822 | 10897659 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10897975 | 10898109 | 10897975 | ID=MS.gene064143.t1.exon13;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10897975 | 10898109 | 10897975 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10899029 | 10899159 | 10899029 | ID=MS.gene064143.t1.exon14;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10899029 | 10899159 | 10899029 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10899353 | 10899415 | 10899353 | ID=MS.gene064143.t1.exon15;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10899353 | 10899415 | 10899353 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10899500 | 10899578 | 10899500 | ID=MS.gene064143.t1.exon16;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10899500 | 10899578 | 10899500 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| chr8.4 | exon | 10899683 | 10899766 | 10899683 | ID=MS.gene064143.t1.exon17;Parent=MS.gene064143.t1 |
| chr8.4 | CDS | 10899683 | 10899766 | 10899683 | ID=cds.MS.gene064143.t1;Parent=MS.gene064143.t1 |
| Gene Sequence |
| Protein sequence |
