Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064259.t1 | XP_024625682.1 | 75.5 | 379 | 38 | 7 | 9 | 332 | 136 | 514 | 4.10E-146 | 527.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064259.t1 | Q9M219 | 38.6 | 381 | 171 | 9 | 9 | 332 | 112 | 486 | 1.6e-58 | 228.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064259.t1 | G7KSF7 | 75.5 | 379 | 38 | 7 | 9 | 332 | 136 | 514 | 3.0e-146 | 527.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene064259.t1 | TR | mTERF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051719 | MS.gene064259 | 0.80053 | 1.38E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064259.t1 | MTR_7g080620 | 75.462 | 379 | 38 | 7 | 9 | 332 | 136 | 514 | 0.0 | 531 |
MS.gene064259.t1 | MTR_8g005155 | 45.789 | 380 | 146 | 8 | 9 | 332 | 119 | 494 | 4.72e-98 | 301 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene064259.t1 | AT3G60400 | 37.958 | 382 | 172 | 8 | 9 | 332 | 112 | 486 | 1.71e-69 | 227 |
Find 69 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTCTATAATTTCATAATTT+TGG | 0.097711 | 7.4:+25632637 | None:intergenic |
CTTGTGTGCTTTGTGGATTT+TGG | 0.128498 | 7.4:-25633625 | MS.gene064259:CDS |
TGCATTGACTATGAATCTTT+TGG | 0.189736 | 7.4:-25632774 | MS.gene064259:CDS |
TTTGGTAATGTTGAAGTTAT+TGG | 0.239987 | 7.4:-25633496 | MS.gene064259:CDS |
GAGGATGTTATTGAAAATTT+TGG | 0.244503 | 7.4:-25633046 | MS.gene064259:CDS |
CCAAAGTTGTTCCCATTTCC+TGG | 0.259323 | 7.4:+25632595 | None:intergenic |
GTAGAGTATTTCTGTGGATT+TGG | 0.306808 | 7.4:-25633196 | MS.gene064259:CDS |
TGAAGTGTTAAAGCTTGATT+TGG | 0.312206 | 7.4:-25633131 | MS.gene064259:CDS |
TGGCATGAGCTCTAAAGATT+TGG | 0.330860 | 7.4:-25633068 | MS.gene064259:CDS |
TTGGTAATGTTGAAGTTATT+GGG | 0.346932 | 7.4:-25633495 | MS.gene064259:CDS |
ATGGTTCTGTGATAAGTTAA+AGG | 0.357332 | 7.4:-25632957 | MS.gene064259:CDS |
GAGCTATGGGTTTGCAAGAA+TGG | 0.361647 | 7.4:-25632976 | MS.gene064259:CDS |
ATTCAATTCTTGAGCGTAGA+AGG | 0.364335 | 7.4:+25632704 | None:intergenic |
GAAGCTGCTTGTGTGCTTTG+TGG | 0.368435 | 7.4:-25633632 | MS.gene064259:CDS |
AGTTAAAGGGTGGGCATTAT+CGG | 0.373850 | 7.4:-25632943 | MS.gene064259:CDS |
TTCTTACATAGATTAGGCTT+TGG | 0.390843 | 7.4:-25632803 | MS.gene064259:CDS |
TTAAATTTCTTACATAGATT+AGG | 0.396832 | 7.4:-25632809 | MS.gene064259:CDS |
GGGAACAACTTTGGACTGTC+TGG | 0.397584 | 7.4:-25632586 | MS.gene064259:CDS |
TGAAGTTATTGGGATTTGTT+TGG | 0.398881 | 7.4:-25633485 | MS.gene064259:CDS |
TTGGTTTAAAAGATTTGGTT+TGG | 0.400701 | 7.4:-25633514 | MS.gene064259:intron |
CTGTGGATTTGGTGGAAAGA+AGG | 0.405320 | 7.4:-25633185 | MS.gene064259:CDS |
ATCTGTACCTAGGTATAATT+CGG | 0.410370 | 7.4:+25632527 | None:intergenic |
CCCATAGCTCTCATCACATT+TGG | 0.415076 | 7.4:+25632989 | None:intergenic |
CCAGGAAATGGGAACAACTT+TGG | 0.424489 | 7.4:-25632595 | MS.gene064259:CDS |
AAATCAAGCTTTAACACTTC+AGG | 0.444612 | 7.4:+25633133 | None:intergenic |
CATGAGCTCTAAAGATTTGG+AGG | 0.452449 | 7.4:-25633065 | MS.gene064259:CDS |
AAGATTATCAAGATGGTTTG+AGG | 0.456096 | 7.4:-25632874 | MS.gene064259:CDS |
CATAGGGATAGATTATACTT+TGG | 0.460683 | 7.4:-25633710 | MS.gene064259:CDS |
CAGCATGTTGCATTATCACT+TGG | 0.466625 | 7.4:-25632554 | MS.gene064259:CDS |
TTGAGGGAAATGTAGATTCA+TGG | 0.468819 | 7.4:-25633345 | MS.gene064259:CDS |
TGGTGGAAAGAAGGAGGAAG+TGG | 0.471562 | 7.4:-25633176 | MS.gene064259:CDS |
TCTTTGGGGAGTTATGTTGA+GGG | 0.476597 | 7.4:-25633361 | MS.gene064259:CDS |
GAGTATTTCTGTGGATTTGG+TGG | 0.478331 | 7.4:-25633193 | MS.gene064259:CDS |
CGGGATAAAGATTATCAAGA+TGG | 0.492595 | 7.4:-25632881 | MS.gene064259:CDS |
GAAAAGAACAGCTTATCATT+CGG | 0.501059 | 7.4:+25633674 | None:intergenic |
GGAAGTGGGTCAAATTCAAA+AGG | 0.502040 | 7.4:-25633440 | MS.gene064259:CDS |
TGGTTCTGTGATAAGTTAAA+GGG | 0.503197 | 7.4:-25632956 | MS.gene064259:CDS |
CAAGTGATCGCAATGAAGAC+CGG | 0.503592 | 7.4:-25632901 | MS.gene064259:CDS |
TTCTTTGGGGAGTTATGTTG+AGG | 0.504050 | 7.4:-25633362 | MS.gene064259:CDS |
ACTTCCTCACTCAAAACAAA+AGG | 0.505183 | 7.4:+25633457 | None:intergenic |
CCCCTTCAGTAAGCCACGTA+TGG | 0.510516 | 7.4:+25632503 | None:intergenic |
CATCTTGATAATCTTTATCC+CGG | 0.516234 | 7.4:+25632882 | None:intergenic |
CCAAATGTGATGAGAGCTAT+GGG | 0.525151 | 7.4:-25632989 | MS.gene064259:CDS |
ACCAAATGTGATGAGAGCTA+TGG | 0.530073 | 7.4:-25632990 | MS.gene064259:CDS |
TTCCATACGTGGCTTACTGA+AGG | 0.534726 | 7.4:-25632505 | MS.gene064259:CDS |
TGTGTTGGGAACAATTAGAA+TGG | 0.537589 | 7.4:-25633020 | MS.gene064259:CDS |
TCCATACGTGGCTTACTGAA+GGG | 0.542740 | 7.4:-25632504 | MS.gene064259:CDS |
TTGGAGCTGTTGAAACACTT+TGG | 0.555886 | 7.4:-25633088 | MS.gene064259:CDS |
GGGTAATGTAGGAGAACTCA+TGG | 0.567143 | 7.4:-25633271 | MS.gene064259:intron |
AAAGCTTGATTTGGAGAAGA+CGG | 0.572369 | 7.4:-25633122 | MS.gene064259:CDS |
CAAGTGATAATGCAACATGC+TGG | 0.576941 | 7.4:+25632555 | None:intergenic |
CATAAAGTAGAGTATTTCTG+TGG | 0.577594 | 7.4:-25633202 | MS.gene064259:CDS |
TTCTGTGATAAGTTAAAGGG+TGG | 0.581828 | 7.4:-25632953 | MS.gene064259:CDS |
TGGATTTGGTGGAAAGAAGG+AGG | 0.582914 | 7.4:-25633182 | MS.gene064259:CDS |
ATTTGTTGATCACAAAGAAG+AGG | 0.582958 | 7.4:-25633233 | MS.gene064259:CDS |
GAAGACGGTGATTAATGTGT+TGG | 0.586071 | 7.4:-25633107 | MS.gene064259:CDS |
AAGTGATCGCAATGAAGACC+GGG | 0.587085 | 7.4:-25632900 | MS.gene064259:CDS |
CCATACGTGGCTTACTGAAG+GGG | 0.590859 | 7.4:-25632503 | MS.gene064259:CDS |
GGTAATGTAGGAGAACTCAT+GGG | 0.593941 | 7.4:-25633270 | MS.gene064259:intron |
AACACACCTAACTTCTCCCA+AGG | 0.625967 | 7.4:+25633598 | None:intergenic |
GAAGTGGGTCAAATTCAAAA+GGG | 0.636084 | 7.4:-25633439 | MS.gene064259:CDS |
AAATGTAGATTCATGGCATG+AGG | 0.639289 | 7.4:-25633338 | MS.gene064259:CDS |
TGGGCATTATCGGCTGCTAG+CGG | 0.639965 | 7.4:-25632933 | MS.gene064259:CDS |
TGGATGACCGAATTATACCT+AGG | 0.659803 | 7.4:-25632534 | MS.gene064259:CDS |
CTAGGTACAGATTCCATACG+TGG | 0.660432 | 7.4:-25632516 | MS.gene064259:CDS |
AATTCTCAAAGCTCTGCATG+TGG | 0.663264 | 7.4:-25632684 | MS.gene064259:CDS |
TCTGTGATAAGTTAAAGGGT+GGG | 0.664345 | 7.4:-25632952 | MS.gene064259:CDS |
CACGTATGGAATCTGTACCT+AGG | 0.683828 | 7.4:+25632517 | None:intergenic |
GTAATGTAGGAGAACTCATG+GGG | 0.700229 | 7.4:-25633269 | MS.gene064259:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAATTTCTTACATAGATT+AGG | - | chr7.4:25633401-25633420 | MS.gene064259:CDS | 15.0% |
!!! | AATTTTCTTGGATAATTCTT+TGG | - | chr7.4:25632833-25632852 | MS.gene064259:CDS | 20.0% |
!!! | ATTTTCTTGGATAATTCTTT+GGG | - | chr7.4:25632834-25632853 | MS.gene064259:CDS | 20.0% |
!!! | GATTTTTTTTACGATTTGAA+TGG | - | chr7.4:25632910-25632929 | MS.gene064259:CDS | 20.0% |
!!! | GCTCTATAATTTCATAATTT+TGG | + | chr7.4:25633576-25633595 | None:intergenic | 20.0% |
!!! | TGATCTAAAGTTAATTTTCT+TGG | - | chr7.4:25632821-25632840 | MS.gene064259:CDS | 20.0% |
!! | GAGGATGTTATTGAAAATTT+TGG | - | chr7.4:25633164-25633183 | MS.gene064259:CDS | 25.0% |
!! | TTGGTTTAAAAGATTTGGTT+TGG | - | chr7.4:25632696-25632715 | MS.gene064259:CDS | 25.0% |
!! | TTTTCTTGGATAATTCTTTG+GGG | - | chr7.4:25632835-25632854 | MS.gene064259:CDS | 25.0% |
!!! | AAAAGTGAATTTTTTCAACC+AGG | - | chr7.4:25633597-25633616 | MS.gene064259:intron | 25.0% |
!!! | AATTTTTTCAACCAGGAAAT+GGG | - | chr7.4:25633604-25633623 | MS.gene064259:intron | 25.0% |
!!! | CTTTGTTGGTTTAAAAGATT+TGG | - | chr7.4:25632691-25632710 | MS.gene064259:CDS | 25.0% |
!!! | TTGGTAATGTTGAAGTTATT+GGG | - | chr7.4:25632715-25632734 | MS.gene064259:CDS | 25.0% |
!!! | TTTGGTAATGTTGAAGTTAT+TGG | - | chr7.4:25632714-25632733 | MS.gene064259:CDS | 25.0% |
!!! | TTTTTTACGATTTGAATGGA+TGG | - | chr7.4:25632914-25632933 | MS.gene064259:CDS | 25.0% |
AAGATTATCAAGATGGTTTG+AGG | - | chr7.4:25633336-25633355 | MS.gene064259:CDS | 30.0% | |
ATCTGTACCTAGGTATAATT+CGG | + | chr7.4:25633686-25633705 | None:intergenic | 30.0% | |
CATAGGGATAGATTATACTT+TGG | - | chr7.4:25632500-25632519 | MS.gene064259:CDS | 30.0% | |
GAAAAGAACAGCTTATCATT+CGG | + | chr7.4:25632539-25632558 | None:intergenic | 30.0% | |
TTCTTACATAGATTAGGCTT+TGG | - | chr7.4:25633407-25633426 | MS.gene064259:CDS | 30.0% | |
! | AAATCAAGCTTTAACACTTC+AGG | + | chr7.4:25633080-25633099 | None:intergenic | 30.0% |
! | ATGGTTCTGTGATAAGTTAA+AGG | - | chr7.4:25633253-25633272 | MS.gene064259:CDS | 30.0% |
! | ATTTGTTGATCACAAAGAAG+AGG | - | chr7.4:25632977-25632996 | MS.gene064259:CDS | 30.0% |
! | CATAAAGTAGAGTATTTCTG+TGG | - | chr7.4:25633008-25633027 | MS.gene064259:CDS | 30.0% |
! | CATCTTGATAATCTTTATCC+CGG | + | chr7.4:25633331-25633350 | None:intergenic | 30.0% |
! | GGAGAAGAGTTCTAATATTT+GGG | - | chr7.4:25632641-25632660 | MS.gene064259:CDS | 30.0% |
! | TGAAGTGTTAAAGCTTGATT+TGG | - | chr7.4:25633079-25633098 | MS.gene064259:CDS | 30.0% |
! | TGAAGTTATTGGGATTTGTT+TGG | - | chr7.4:25632725-25632744 | MS.gene064259:intron | 30.0% |
! | TGGAGAAGAGTTCTAATATT+TGG | - | chr7.4:25632640-25632659 | MS.gene064259:CDS | 30.0% |
! | TGGTTCTGTGATAAGTTAAA+GGG | - | chr7.4:25633254-25633273 | MS.gene064259:CDS | 30.0% |
!! | GAAAATTTTGGTCATGTGTT+GGG | - | chr7.4:25633176-25633195 | MS.gene064259:CDS | 30.0% |
!! | TGAAAATTTTGGTCATGTGT+TGG | - | chr7.4:25633175-25633194 | MS.gene064259:CDS | 30.0% |
!!! | AATTTTGGTTCAGAATCCTT+GGG | + | chr7.4:25633561-25633580 | None:intergenic | 30.0% |
!!! | CAAATTCAAAAGGGTGTTTT+TGG | - | chr7.4:25632780-25632799 | MS.gene064259:CDS | 30.0% |
!!! | GAATTTTTTCAACCAGGAAA+TGG | - | chr7.4:25633603-25633622 | MS.gene064259:intron | 30.0% |
!!! | TAATTTTGGTTCAGAATCCT+TGG | + | chr7.4:25633562-25633581 | None:intergenic | 30.0% |
!!! | TGCATTGACTATGAATCTTT+TGG | - | chr7.4:25633436-25633455 | MS.gene064259:CDS | 30.0% |
!!! | TTTTCCTTTTGTTTTGAGTG+AGG | - | chr7.4:25632749-25632768 | MS.gene064259:intron | 30.0% |
AAATGTAGATTCATGGCATG+AGG | - | chr7.4:25632872-25632891 | MS.gene064259:CDS | 35.0% | |
ACTTCCTCACTCAAAACAAA+AGG | + | chr7.4:25632756-25632775 | None:intergenic | 35.0% | |
ATTCAATTCTTGAGCGTAGA+AGG | + | chr7.4:25633509-25633528 | None:intergenic | 35.0% | |
CGGGATAAAGATTATCAAGA+TGG | - | chr7.4:25633329-25633348 | MS.gene064259:CDS | 35.0% | |
GAAGTGGGTCAAATTCAAAA+GGG | - | chr7.4:25632771-25632790 | MS.gene064259:CDS | 35.0% | |
GAAGTTAGGTGTGTTGTATA+TGG | - | chr7.4:25632620-25632639 | MS.gene064259:CDS | 35.0% | |
GTGTTGAAGAGTTGAAATTG+AGG | - | chr7.4:25632668-25632687 | MS.gene064259:CDS | 35.0% | |
TACGATTTGAATGGATGGAA+GGG | - | chr7.4:25632919-25632938 | MS.gene064259:CDS | 35.0% | |
TCTGTGATAAGTTAAAGGGT+GGG | - | chr7.4:25633258-25633277 | MS.gene064259:CDS | 35.0% | |
TGTGTTGGGAACAATTAGAA+TGG | - | chr7.4:25633190-25633209 | MS.gene064259:CDS | 35.0% | |
TTACGATTTGAATGGATGGA+AGG | - | chr7.4:25632918-25632937 | MS.gene064259:CDS | 35.0% | |
TTCTGTGATAAGTTAAAGGG+TGG | - | chr7.4:25633257-25633276 | MS.gene064259:CDS | 35.0% | |
TTGAGGGAAATGTAGATTCA+TGG | - | chr7.4:25632865-25632884 | MS.gene064259:CDS | 35.0% | |
! | AGTTGAAATTGAGGCTTTGT+TGG | - | chr7.4:25632677-25632696 | MS.gene064259:CDS | 35.0% |
! | ATCTTTTGGATCGTTTTGCA+CGG | - | chr7.4:25633450-25633469 | MS.gene064259:CDS | 35.0% |
! | GTAGAGTATTTCTGTGGATT+TGG | - | chr7.4:25633014-25633033 | MS.gene064259:CDS | 35.0% |
! | TGATAAGCTGTTCTTTTCAG+AGG | - | chr7.4:25632541-25632560 | MS.gene064259:CDS | 35.0% |
! | TTGTGTGCTTTGTGGATTTT+GGG | - | chr7.4:25632586-25632605 | MS.gene064259:CDS | 35.0% |
!! | AAAGCTTGATTTGGAGAAGA+CGG | - | chr7.4:25633088-25633107 | MS.gene064259:CDS | 35.0% |
!!! | TTTGTTTTGAGTGAGGAAGT+GGG | - | chr7.4:25632756-25632775 | MS.gene064259:intron | 35.0% |
!!! | TTTTGTTTTGAGTGAGGAAG+TGG | - | chr7.4:25632755-25632774 | MS.gene064259:intron | 35.0% |
AATGGATGGAAGGGTAATGT+AGG | - | chr7.4:25632928-25632947 | MS.gene064259:CDS | 40.0% | |
AATTCTCAAAGCTCTGCATG+TGG | - | chr7.4:25633526-25633545 | MS.gene064259:intron | 40.0% | |
ACCAAATGTGATGAGAGCTA+TGG | - | chr7.4:25633220-25633239 | MS.gene064259:CDS | 40.0% | |
AGTTAAAGGGTGGGCATTAT+CGG | - | chr7.4:25633267-25633286 | MS.gene064259:intron | 40.0% | |
CAGCATGTTGCATTATCACT+TGG | - | chr7.4:25633656-25633675 | MS.gene064259:CDS | 40.0% | |
CATGTGGTAAGAAAAACCCA+AGG | - | chr7.4:25633542-25633561 | MS.gene064259:intron | 40.0% | |
CCAAATGTGATGAGAGCTAT+GGG | - | chr7.4:25633221-25633240 | MS.gene064259:CDS | 40.0% | |
GAAGACGGTGATTAATGTGT+TGG | - | chr7.4:25633103-25633122 | MS.gene064259:CDS | 40.0% | |
GGAAGTGGGTCAAATTCAAA+AGG | - | chr7.4:25632770-25632789 | MS.gene064259:intron | 40.0% | |
GGTAATGTAGGAGAACTCAT+GGG | - | chr7.4:25632940-25632959 | MS.gene064259:CDS | 40.0% | |
GTAATGTAGGAGAACTCATG+GGG | - | chr7.4:25632941-25632960 | MS.gene064259:CDS | 40.0% | |
TGGATGACCGAATTATACCT+AGG | - | chr7.4:25633676-25633695 | MS.gene064259:CDS | 40.0% | |
TTGGAGCTGTTGAAACACTT+TGG | - | chr7.4:25633122-25633141 | MS.gene064259:CDS | 40.0% | |
! | AGCTGTTCTTTTCAGAGGAT+AGG | - | chr7.4:25632546-25632565 | MS.gene064259:CDS | 40.0% |
! | CAAGTGATAATGCAACATGC+TGG | + | chr7.4:25633658-25633677 | None:intergenic | 40.0% |
! | CTTGTGTGCTTTGTGGATTT+TGG | - | chr7.4:25632585-25632604 | MS.gene064259:CDS | 40.0% |
! | GAGTATTTCTGTGGATTTGG+TGG | - | chr7.4:25633017-25633036 | MS.gene064259:CDS | 40.0% |
! | TCTTTGGGGAGTTATGTTGA+GGG | - | chr7.4:25632849-25632868 | MS.gene064259:CDS | 40.0% |
! | TTCTTTGGGGAGTTATGTTG+AGG | - | chr7.4:25632848-25632867 | MS.gene064259:CDS | 40.0% |
!! | CATGAGCTCTAAAGATTTGG+AGG | - | chr7.4:25633145-25633164 | MS.gene064259:CDS | 40.0% |
!! | TGGCATGAGCTCTAAAGATT+TGG | - | chr7.4:25633142-25633161 | MS.gene064259:CDS | 40.0% |
!!! | TGTGGATTTTGGGTTTCCTT+GGG | - | chr7.4:25632596-25632615 | MS.gene064259:CDS | 40.0% |
!!! | TTGTGGATTTTGGGTTTCCT+TGG | - | chr7.4:25632595-25632614 | MS.gene064259:CDS | 40.0% |
AACACACCTAACTTCTCCCA+AGG | + | chr7.4:25632615-25632634 | None:intergenic | 45.0% | |
AAGTGATCGCAATGAAGACC+GGG | - | chr7.4:25633310-25633329 | MS.gene064259:intron | 45.0% | |
CAAGTGATCGCAATGAAGAC+CGG | - | chr7.4:25633309-25633328 | MS.gene064259:intron | 45.0% | |
CACGTATGGAATCTGTACCT+AGG | + | chr7.4:25633696-25633715 | None:intergenic | 45.0% | |
CCAAAGTTGTTCCCATTTCC+TGG | + | chr7.4:25633618-25633637 | None:intergenic | 45.0% | |
CCAGGAAATGGGAACAACTT+TGG | - | chr7.4:25633615-25633634 | MS.gene064259:CDS | 45.0% | |
CCCATAGCTCTCATCACATT+TGG | + | chr7.4:25633224-25633243 | None:intergenic | 45.0% | |
CTAGGTACAGATTCCATACG+TGG | - | chr7.4:25633694-25633713 | MS.gene064259:CDS | 45.0% | |
GAGCTATGGGTTTGCAAGAA+TGG | - | chr7.4:25633234-25633253 | MS.gene064259:CDS | 45.0% | |
GGGTAATGTAGGAGAACTCA+TGG | - | chr7.4:25632939-25632958 | MS.gene064259:CDS | 45.0% | |
TCCATACGTGGCTTACTGAA+GGG | - | chr7.4:25633706-25633725 | MS.gene064259:CDS | 45.0% | |
TTCCATACGTGGCTTACTGA+AGG | - | chr7.4:25633705-25633724 | MS.gene064259:CDS | 45.0% | |
!! | CTGTGGATTTGGTGGAAAGA+AGG | - | chr7.4:25633025-25633044 | MS.gene064259:CDS | 45.0% |
!! | TGGATTTGGTGGAAAGAAGG+AGG | - | chr7.4:25633028-25633047 | MS.gene064259:CDS | 45.0% |
CCATACGTGGCTTACTGAAG+GGG | - | chr7.4:25633707-25633726 | MS.gene064259:CDS | 50.0% | |
GAAGCTGCTTGTGTGCTTTG+TGG | - | chr7.4:25632578-25632597 | MS.gene064259:CDS | 50.0% | |
GGGAACAACTTTGGACTGTC+TGG | - | chr7.4:25633624-25633643 | MS.gene064259:CDS | 50.0% | |
GGGTTTCCTTGGGAGAAGTT+AGG | - | chr7.4:25632606-25632625 | MS.gene064259:CDS | 50.0% | |
TGGTGGAAAGAAGGAGGAAG+TGG | - | chr7.4:25633034-25633053 | MS.gene064259:CDS | 50.0% | |
CCCCTTCAGTAAGCCACGTA+TGG | + | chr7.4:25633710-25633729 | None:intergenic | 55.0% | |
CGGCACAAGCAGTGAGTTAC+AGG | - | chr7.4:25633470-25633489 | MS.gene064259:CDS | 55.0% | |
! | TGGGCATTATCGGCTGCTAG+CGG | - | chr7.4:25633277-25633296 | MS.gene064259:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 25632500 | 25633732 | 25632500 | ID=MS.gene064259 |
chr7.4 | mRNA | 25632500 | 25633732 | 25632500 | ID=MS.gene064259.t1;Parent=MS.gene064259 |
chr7.4 | exon | 25633610 | 25633732 | 25633610 | ID=MS.gene064259.t1.exon1;Parent=MS.gene064259.t1 |
chr7.4 | CDS | 25633610 | 25633732 | 25633610 | ID=cds.MS.gene064259.t1;Parent=MS.gene064259.t1 |
chr7.4 | exon | 25633328 | 25633524 | 25633328 | ID=MS.gene064259.t1.exon2;Parent=MS.gene064259.t1 |
chr7.4 | CDS | 25633328 | 25633524 | 25633328 | ID=cds.MS.gene064259.t1;Parent=MS.gene064259.t1 |
chr7.4 | exon | 25632771 | 25633282 | 25632771 | ID=MS.gene064259.t1.exon3;Parent=MS.gene064259.t1 |
chr7.4 | CDS | 25632771 | 25633282 | 25632771 | ID=cds.MS.gene064259.t1;Parent=MS.gene064259.t1 |
chr7.4 | exon | 25632500 | 25632735 | 25632500 | ID=MS.gene064259.t1.exon4;Parent=MS.gene064259.t1 |
chr7.4 | CDS | 25632500 | 25632735 | 25632500 | ID=cds.MS.gene064259.t1;Parent=MS.gene064259.t1 |
Gene Sequence |
Protein sequence |