Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064573.t1 | XP_003600215.1 | 97.9 | 334 | 7 | 0 | 14 | 347 | 80 | 413 | 1.30E-173 | 619 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064573.t1 | Q42545 | 85.4 | 336 | 47 | 1 | 14 | 347 | 98 | 433 | 6.5e-153 | 541.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064573.t1 | G7J1F3 | 97.9 | 334 | 7 | 0 | 14 | 347 | 80 | 413 | 9.6e-174 | 619.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05101 | MS.gene064573 | 0.822445 | 2.36E-53 | -1.69E-46 |
| MS.gene057121 | MS.gene064573 | 0.805026 | 1.63E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064573.t1 | MTR_3g055590 | 97.904 | 334 | 7 | 0 | 14 | 347 | 80 | 413 | 0.0 | 657 |
| MS.gene064573.t1 | MTR_5g094120 | 89.851 | 335 | 33 | 1 | 14 | 347 | 84 | 418 | 0.0 | 570 |
| MS.gene064573.t1 | MTR_7g104500 | 60.211 | 284 | 111 | 1 | 14 | 295 | 160 | 443 | 9.51e-109 | 325 |
| MS.gene064573.t1 | MTR_7g104500 | 60.211 | 284 | 111 | 1 | 14 | 295 | 160 | 443 | 3.72e-108 | 325 |
| MS.gene064573.t1 | MTR_1g060010 | 59.507 | 284 | 113 | 1 | 14 | 295 | 147 | 430 | 9.51e-108 | 323 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064573.t1 | AT5G55280 | 85.417 | 336 | 47 | 1 | 14 | 347 | 98 | 433 | 0.0 | 545 |
| MS.gene064573.t1 | AT3G52750 | 61.484 | 283 | 107 | 1 | 15 | 295 | 140 | 422 | 2.88e-110 | 330 |
| MS.gene064573.t1 | AT3G52750 | 61.484 | 283 | 107 | 1 | 15 | 295 | 140 | 422 | 2.88e-110 | 330 |
| MS.gene064573.t1 | AT3G52750 | 61.484 | 283 | 107 | 1 | 15 | 295 | 140 | 422 | 2.88e-110 | 330 |
| MS.gene064573.t1 | AT2G36250 | 60.208 | 289 | 112 | 2 | 9 | 295 | 58 | 345 | 4.72e-109 | 324 |
| MS.gene064573.t1 | AT2G36250 | 60.208 | 289 | 112 | 2 | 9 | 295 | 139 | 426 | 3.58e-108 | 325 |
| MS.gene064573.t1 | AT2G36250 | 60.208 | 289 | 112 | 2 | 9 | 295 | 139 | 426 | 3.58e-108 | 325 |
| MS.gene064573.t1 | AT2G36250 | 60.208 | 289 | 112 | 2 | 9 | 295 | 139 | 426 | 3.58e-108 | 325 |
| MS.gene064573.t1 | AT3G52750 | 62.871 | 202 | 73 | 1 | 15 | 214 | 140 | 341 | 3.64e-76 | 238 |
Find 71 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTGCAAATATTATATT+TGG | 0.072275 | 3.1:+41295865 | MS.gene064573:CDS |
| TTGATGTTTGTTTGCTTTCT+TGG | 0.139379 | 3.1:-41296020 | None:intergenic |
| GCTACTTTGGCACCTTTAAT+TGG | 0.202470 | 3.1:+41295352 | MS.gene064573:CDS |
| TACTGGTGGTAATCCACTTT+TGG | 0.220317 | 3.1:+41294125 | MS.gene064573:CDS |
| ACAAACATCAACTCCGTTAA+AGG | 0.232132 | 3.1:+41296032 | MS.gene064573:CDS |
| TGAATAGATGATCCAATTAA+AGG | 0.277831 | 3.1:-41295364 | None:intergenic |
| GATCTGTAAGTAGCATCTTT+TGG | 0.290387 | 3.1:-41295960 | None:intergenic |
| CTTCTGCAAATATTATATTT+GGG | 0.298466 | 3.1:+41295866 | MS.gene064573:CDS |
| ATGGGTGGAGGCACGGGGTC+TGG | 0.341711 | 3.1:+41294228 | MS.gene064573:CDS |
| ACCTATCCCTTTAGCTTTGA+AGG | 0.346538 | 3.1:+41294312 | MS.gene064573:CDS |
| TTTGATATCCTGGCCACGAC+TGG | 0.356822 | 3.1:-41294258 | None:intergenic |
| GCTGGTATGGGTGGAGGCAC+GGG | 0.371048 | 3.1:+41294222 | MS.gene064573:CDS |
| GGGATAGTATATAATATTAC+TGG | 0.374649 | 3.1:+41295397 | MS.gene064573:CDS |
| AGGAAAAGACATAACTCTTC+AGG | 0.382999 | 3.1:+41295420 | MS.gene064573:CDS |
| AGTGTTTGTAACTGCTGGTA+TGG | 0.388284 | 3.1:+41294209 | MS.gene064573:CDS |
| GAGCTCCTGACTCGTGGATT+AGG | 0.391281 | 3.1:+41293609 | MS.gene064573:CDS |
| TCATCTATTCAGTCAGCTAC+TGG | 0.395016 | 3.1:+41295376 | MS.gene064573:CDS |
| TCAATAAGCTTTGCGGCCCT+TGG | 0.400977 | 3.1:-41295982 | None:intergenic |
| GATTTAGTGTTTGTAACTGC+TGG | 0.404828 | 3.1:+41294204 | MS.gene064573:CDS |
| TGCTGGTATGGGTGGAGGCA+CGG | 0.410369 | 3.1:+41294221 | MS.gene064573:CDS |
| ACTATTGCTAATGCTCTTCA+TGG | 0.413549 | 3.1:+41294177 | MS.gene064573:CDS |
| TTGCGTCCTTCAAAGCTAAA+GGG | 0.429034 | 3.1:-41294318 | None:intergenic |
| TTTGCGTCCTTCAAAGCTAA+AGG | 0.434956 | 3.1:-41294319 | None:intergenic |
| GAAAAGTTTGAGGCCTTTAA+CGG | 0.437127 | 3.1:-41296045 | None:intergenic |
| GACTCTGGAACTGCAATGCT+TGG | 0.437859 | 3.1:+41295280 | MS.gene064573:CDS |
| GGAAGTGAATAGAGTTTCTC+AGG | 0.438800 | 3.1:+41295441 | MS.gene064573:CDS |
| ATGTCAAGCAGACGATCATT+TGG | 0.443168 | 3.1:-41294894 | None:intergenic |
| TGTTTGCTTTCTTGGCCCAC+AGG | 0.447832 | 3.1:-41296012 | None:intergenic |
| AGCTGCAGAACAAGCTACTT+TGG | 0.460703 | 3.1:+41295339 | MS.gene064573:CDS |
| TTGATATCCTGGCCACGACT+GGG | 0.461500 | 3.1:-41294257 | None:intergenic |
| AGGACGCAAAAGATCCTTGC+AGG | 0.465101 | 3.1:+41294332 | MS.gene064573:CDS |
| GTGCTGCCCCAGTCGTGGCC+AGG | 0.469949 | 3.1:+41294250 | MS.gene064573:CDS |
| TCCGACCTAATCCACGAGTC+AGG | 0.479972 | 3.1:-41293614 | None:intergenic |
| CCCATCTTTCTACAGATACC+TGG | 0.495617 | 3.1:+41295214 | MS.gene064573:intron |
| GTGTTTGTAACTGCTGGTAT+GGG | 0.496706 | 3.1:+41294210 | MS.gene064573:CDS |
| TTGGAAGGACTGTGAGAAGC+CGG | 0.515580 | 3.1:-41295941 | None:intergenic |
| GTCTGGTGCTGCCCCAGTCG+TGG | 0.517053 | 3.1:+41294245 | MS.gene064573:CDS |
| AACTGTTGATGAAAAGTTTG+AGG | 0.519155 | 3.1:-41296055 | None:intergenic |
| TAATCTGTCAATAAGCTTTG+CGG | 0.521014 | 3.1:-41295989 | None:intergenic |
| TATAATATTTGCAGAAGGAT+CGG | 0.522160 | 3.1:-41295860 | None:intergenic |
| GTTCTGCAGCTTCTTCTGCA+CGG | 0.522203 | 3.1:-41295327 | None:intergenic |
| TTCTGCAAATATTATATTTG+GGG | 0.523497 | 3.1:+41295867 | MS.gene064573:CDS |
| CTGGTATGGGTGGAGGCACG+GGG | 0.523953 | 3.1:+41294223 | MS.gene064573:CDS |
| AGACTGAAAGCATCTGTAAG+AGG | 0.526543 | 3.1:-41294933 | None:intergenic |
| TTGTTGACGAGCGCTACAGC+GGG | 0.527049 | 3.1:+41295893 | MS.gene064573:CDS |
| CTTGGAGTAGGTGTTTCCTC+TGG | 0.532475 | 3.1:+41295298 | MS.gene064573:CDS |
| GTAACTGCTGGTATGGGTGG+AGG | 0.550166 | 3.1:+41294216 | MS.gene064573:CDS |
| CGAAAAGCTGCAGCAGAATG+TGG | 0.555459 | 3.1:+41294854 | MS.gene064573:CDS |
| CATGTGACTCTCATTGCCAC+CGG | 0.556072 | 3.1:+41295922 | MS.gene064573:CDS |
| CATCTATTCAGTCAGCTACT+GGG | 0.556322 | 3.1:+41295377 | MS.gene064573:CDS |
| GCCAGGATATCAAAAGAAGC+TGG | 0.571214 | 3.1:+41294267 | MS.gene064573:CDS |
| AGATGCTACTTACAGATCCA+AGG | 0.572904 | 3.1:+41295965 | MS.gene064573:CDS |
| GTTGTTGACGAGCGCTACAG+CGG | 0.575320 | 3.1:+41295892 | MS.gene064573:CDS |
| TTTGTAACTGCTGGTATGGG+TGG | 0.578377 | 3.1:+41294213 | MS.gene064573:CDS |
| AGAAATGACACATGCCTGCA+AGG | 0.580338 | 3.1:-41294346 | None:intergenic |
| ATTGGAGAGCTCCTGACTCG+TGG | 0.581021 | 3.1:+41293603 | MS.gene064573:CDS |
| GATACCTGGTCTTGTAAATG+TGG | 0.581169 | 3.1:+41295228 | MS.gene064573:intron |
| AAAGCGGTGATGAAAGACTC+TGG | 0.581555 | 3.1:+41295265 | MS.gene064573:CDS |
| TCCTTCAAAGCTAAAGGGAT+AGG | 0.592236 | 3.1:-41294313 | None:intergenic |
| GGAACTGCAATGCTTGGAGT+AGG | 0.595218 | 3.1:+41295286 | MS.gene064573:CDS |
| AAATCCACATTTACAAGACC+AGG | 0.597382 | 3.1:-41295232 | None:intergenic |
| GCTTATTGACAGATTACCTG+TGG | 0.601239 | 3.1:+41295996 | MS.gene064573:CDS |
| TGATATCCTGGCCACGACTG+GGG | 0.602400 | 3.1:-41294256 | None:intergenic |
| CCAAATATAATATTTGCAGA+AGG | 0.605303 | 3.1:-41295865 | None:intergenic |
| GATAGAGATGCAGGTACTGG+TGG | 0.608216 | 3.1:+41294111 | MS.gene064573:intron |
| GAAGCTGGTTACTTGACTGT+TGG | 0.618446 | 3.1:+41294282 | MS.gene064573:CDS |
| GATGCTACTTACAGATCCAA+GGG | 0.642451 | 3.1:+41295966 | MS.gene064573:CDS |
| ATAGTATATAATATTACTGG+AGG | 0.648111 | 3.1:+41295400 | MS.gene064573:CDS |
| CTTATTGACAGATTACCTGT+GGG | 0.675733 | 3.1:+41295997 | MS.gene064573:CDS |
| GAAGGACTGTGAGAAGCCGG+TGG | 0.689459 | 3.1:-41295938 | None:intergenic |
| TGTTGACGAGCGCTACAGCG+GGG | 0.759544 | 3.1:+41295894 | MS.gene064573:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAATAATTAAAAGTTAA+TGG | - | chr3.1:41291220-41291239 | None:intergenic | 10.0% |
| !!! | AGTATAAAAATTTAATTTTG+TGG | + | chr3.1:41292555-41292574 | MS.gene064573:intron | 10.0% |
| !!! | ATATATTTTTTATCATATCA+TGG | + | chr3.1:41292990-41293009 | MS.gene064573:intron | 10.0% |
| !!! | TTTTAGTGTATTTTATTAAT+GGG | + | chr3.1:41291817-41291836 | MS.gene064573:intron | 10.0% |
| !!! | TTTTTAGTGTATTTTATTAA+TGG | + | chr3.1:41291816-41291835 | MS.gene064573:intron | 10.0% |
| !! | AAAGATATATCAGATAAATT+TGG | - | chr3.1:41291258-41291277 | None:intergenic | 15.0% |
| !! | AACATATAAAAATTTCCAAT+TGG | - | chr3.1:41293670-41293689 | None:intergenic | 15.0% |
| !! | ACATATAAAAATTTCCAATT+GGG | - | chr3.1:41293669-41293688 | None:intergenic | 15.0% |
| !!! | AAAAATTTAATTTTGTGGTT+CGG | + | chr3.1:41292560-41292579 | MS.gene064573:intron | 15.0% |
| !!! | ACATCAAATTACAAAATTTT+AGG | - | chr3.1:41292121-41292140 | None:intergenic | 15.0% |
| !!! | TAATAAAGTAAATGTCATTT+TGG | + | chr3.1:41293828-41293847 | MS.gene064573:intron | 15.0% |
| !!! | TCTTATTCTTTTTTTAATCA+GGG | + | chr3.1:41293510-41293529 | MS.gene064573:intron | 15.0% |
| !!! | TTCAAATTACATTATTTTAC+AGG | - | chr3.1:41292011-41292030 | None:intergenic | 15.0% |
| !!! | TTGCATTTTAGTAATTAAAA+TGG | + | chr3.1:41293013-41293032 | MS.gene064573:intron | 15.0% |
| !! | AAAAATTACATGTTACACTT+TGG | - | chr3.1:41292315-41292334 | None:intergenic | 20.0% |
| !! | AATGAAATGTTCAATAATGA+TGG | - | chr3.1:41295146-41295165 | None:intergenic | 20.0% |
| !! | AATGTAATTTGAAGAATCTT+TGG | + | chr3.1:41292018-41292037 | MS.gene064573:intron | 20.0% |
| !! | AATTCAAATATTATGATTCC+AGG | + | chr3.1:41294818-41294837 | MS.gene064573:intron | 20.0% |
| !! | ATAGTATATAATATTACTGG+AGG | + | chr3.1:41295400-41295419 | MS.gene064573:CDS | 20.0% |
| !! | CTAAAATCGGTAATATTTAT+AGG | + | chr3.1:41295822-41295841 | MS.gene064573:intron | 20.0% |
| !! | CTCATACACAATAAAATAAT+AGG | + | chr3.1:41292352-41292371 | MS.gene064573:intron | 20.0% |
| !! | CTTCTGCAAATATTATATTT+GGG | + | chr3.1:41295866-41295885 | MS.gene064573:CDS | 20.0% |
| !! | GAATCTTCAAATTATAGATT+TGG | + | chr3.1:41292747-41292766 | MS.gene064573:intron | 20.0% |
| !! | GCTTATTTGAACTTATTTAT+TGG | + | chr3.1:41295537-41295556 | MS.gene064573:intron | 20.0% |
| !! | TATTTCAAACAATTCATTGT+TGG | + | chr3.1:41294027-41294046 | MS.gene064573:intron | 20.0% |
| !! | TCTATAATTTGAAGATTCTT+TGG | - | chr3.1:41292745-41292764 | None:intergenic | 20.0% |
| !! | TTAAATTCAATAGCTGATAT+AGG | - | chr3.1:41293727-41293746 | None:intergenic | 20.0% |
| !! | TTCTGCAAATATTATATTTG+GGG | + | chr3.1:41295867-41295886 | MS.gene064573:CDS | 20.0% |
| !! | TTTCAACAAAAATGTGAATT+AGG | + | chr3.1:41293961-41293980 | MS.gene064573:intron | 20.0% |
| !!! | AAATTACATTATTTTACAGG+AGG | - | chr3.1:41292008-41292027 | None:intergenic | 20.0% |
| !!! | AATTACATTATTTTACAGGA+GGG | - | chr3.1:41292007-41292026 | None:intergenic | 20.0% |
| !!! | ACATTTTGATGTTATCTTAT+TGG | + | chr3.1:41295176-41295195 | MS.gene064573:intron | 20.0% |
| !!! | ACATTTTTTGTTGTTAATTG+TGG | - | chr3.1:41291503-41291522 | None:intergenic | 20.0% |
| !!! | ATGTATCAGTTTTCTAAAAT+CGG | + | chr3.1:41295809-41295828 | MS.gene064573:intron | 20.0% |
| !!! | CATTTTGATGTTATCTTATT+GGG | + | chr3.1:41295177-41295196 | MS.gene064573:intron | 20.0% |
| !!! | CTAAAATTTTCTCAAATTAC+AGG | + | chr3.1:41292084-41292103 | MS.gene064573:intron | 20.0% |
| !!! | GTCTTATTCTTTTTTTAATC+AGG | + | chr3.1:41293509-41293528 | MS.gene064573:intron | 20.0% |
| !!! | TAGTGTTAATTAACAGTTTT+AGG | - | chr3.1:41294411-41294430 | None:intergenic | 20.0% |
| !!! | TTTAGTTTACACAACTAAAT+TGG | + | chr3.1:41295065-41295084 | MS.gene064573:intron | 20.0% |
| ! | AACAAAAATGTGAATTAGGA+GGG | + | chr3.1:41293965-41293984 | MS.gene064573:intron | 25.0% |
| ! | AACTCAAGATTACTGAAATT+GGG | - | chr3.1:41294481-41294500 | None:intergenic | 25.0% |
| ! | AATGCTAAGATTAAAGTTGT+TGG | + | chr3.1:41291681-41291700 | MS.gene064573:intron | 25.0% |
| ! | ACAATTGTAATACGTACATA+AGG | - | chr3.1:41293905-41293924 | None:intergenic | 25.0% |
| ! | AGAAACATGAGAGAAAAATA+TGG | - | chr3.1:41291196-41291215 | None:intergenic | 25.0% |
| ! | ATTGAAATTGGAATTGGAAT+TGG | - | chr3.1:41291456-41291475 | None:intergenic | 25.0% |
| ! | ATTGGAATTGAAATTGGAAT+TGG | - | chr3.1:41291462-41291481 | None:intergenic | 25.0% |
| ! | CAAACACATCCAAAAATATT+CGG | + | chr3.1:41292628-41292647 | MS.gene064573:intron | 25.0% |
| ! | CAAATATATGCGGTTTAATT+TGG | + | chr3.1:41292273-41292292 | MS.gene064573:intron | 25.0% |
| ! | CAAATTAAACCGCATATATT+TGG | - | chr3.1:41292275-41292294 | None:intergenic | 25.0% |
| ! | CCAAATATAATATTTGCAGA+AGG | - | chr3.1:41295868-41295887 | None:intergenic | 25.0% |
| ! | CCTTCTGCAAATATTATATT+TGG | + | chr3.1:41295865-41295884 | MS.gene064573:CDS | 25.0% |
| ! | GAAACATGAGAGAAAAATAT+GGG | - | chr3.1:41291195-41291214 | None:intergenic | 25.0% |
| ! | GGGATAGTATATAATATTAC+TGG | + | chr3.1:41295397-41295416 | MS.gene064573:CDS | 25.0% |
| ! | GTAATTTGATGTCATGAATA+GGG | + | chr3.1:41292129-41292148 | MS.gene064573:intron | 25.0% |
| ! | GTTCAAATATTGTGAAATAG+TGG | - | chr3.1:41294598-41294617 | None:intergenic | 25.0% |
| ! | TAACTCAAGATTACTGAAAT+TGG | - | chr3.1:41294482-41294501 | None:intergenic | 25.0% |
| ! | TAATTTGATGTCATGAATAG+GGG | + | chr3.1:41292130-41292149 | MS.gene064573:intron | 25.0% |
| ! | TAGTTTATTGGGGTTATTTA+GGG | - | chr3.1:41291535-41291554 | None:intergenic | 25.0% |
| ! | TATAATATTTGCAGAAGGAT+CGG | - | chr3.1:41295863-41295882 | None:intergenic | 25.0% |
| ! | TATCAGCTATTGAATTTAAG+TGG | + | chr3.1:41293728-41293747 | MS.gene064573:intron | 25.0% |
| ! | TCATAATACAGTGACATAAT+AGG | - | chr3.1:41295040-41295059 | None:intergenic | 25.0% |
| ! | TGAATAGATGATCCAATTAA+AGG | - | chr3.1:41295367-41295386 | None:intergenic | 25.0% |
| ! | TGCACTAATATATTGCTTAT+TGG | - | chr3.1:41292507-41292526 | None:intergenic | 25.0% |
| ! | TGTAATTTGATGTCATGAAT+AGG | + | chr3.1:41292128-41292147 | MS.gene064573:intron | 25.0% |
| ! | TTGAAATTGGAATTGGAATT+GGG | - | chr3.1:41291455-41291474 | None:intergenic | 25.0% |
| !! | AAATTTTCTCAAATTACAGG+CGG | + | chr3.1:41292087-41292106 | MS.gene064573:intron | 25.0% |
| !! | CTCTTTATTTAATCATGTGA+TGG | + | chr3.1:41292825-41292844 | MS.gene064573:intron | 25.0% |
| !!! | AAAGTTATTATGTTGCTTTG+AGG | + | chr3.1:41294777-41294796 | MS.gene064573:intron | 25.0% |
| !!! | AAATTTTTTGATAGAGATGC+AGG | + | chr3.1:41294102-41294121 | MS.gene064573:intron | 25.0% |
| !!! | AATATTTTTGGATGTGTTTG+GGG | - | chr3.1:41292628-41292647 | None:intergenic | 25.0% |
| !!! | AATCCTCTTGTTTTTGTATT+TGG | + | chr3.1:41292966-41292985 | MS.gene064573:intron | 25.0% |
| !!! | AATTACAACGAATTTGCTAT+TGG | - | chr3.1:41292859-41292878 | None:intergenic | 25.0% |
| !!! | ATCCTCTTGTTTTTGTATTT+GGG | + | chr3.1:41292967-41292986 | MS.gene064573:intron | 25.0% |
| !!! | ATTTGAAGATTCTTTGGTTT+TGG | - | chr3.1:41292739-41292758 | None:intergenic | 25.0% |
| !!! | CAAAAATATTCGGTTTTTTG+CGG | + | chr3.1:41292638-41292657 | MS.gene064573:intron | 25.0% |
| !!! | GAATATTTTTGGATGTGTTT+GGG | - | chr3.1:41292629-41292648 | None:intergenic | 25.0% |
| !!! | GTTATTTTCATAAGCTGTTT+TGG | - | chr3.1:41295653-41295672 | None:intergenic | 25.0% |
| !!! | TTTAATTTGTTCTAGCATAC+TGG | - | chr3.1:41294436-41294455 | None:intergenic | 25.0% |
| AAAATCAATGATATGGCATG+GGG | + | chr3.1:41292056-41292075 | MS.gene064573:intron | 30.0% | |
| AAATGGTTATTGTTACGATG+TGG | + | chr3.1:41293030-41293049 | MS.gene064573:intron | 30.0% | |
| AAGATTAAAGTTGTTGGTGT+TGG | + | chr3.1:41291687-41291706 | MS.gene064573:intron | 30.0% | |
| ACAAAATCAATGATATGGCA+TGG | + | chr3.1:41292054-41292073 | MS.gene064573:intron | 30.0% | |
| ACAATAATGACTACCATGTA+TGG | + | chr3.1:41293313-41293332 | MS.gene064573:intron | 30.0% | |
| ACATAAGGATTCAGGAAATA+TGG | - | chr3.1:41293890-41293909 | None:intergenic | 30.0% | |
| ACATGGTAGTCATTATTGTT+GGG | - | chr3.1:41293312-41293331 | None:intergenic | 30.0% | |
| ACTGGACAAAATCAATGATA+TGG | + | chr3.1:41292049-41292068 | MS.gene064573:intron | 30.0% | |
| AGAAATGATGTAGAAGAAAG+AGG | + | chr3.1:41290850-41290869 | MS.gene064573:intron | 30.0% | |
| AGTAAGCTGAAAATACCTTA+CGG | - | chr3.1:41295618-41295637 | None:intergenic | 30.0% | |
| ATCCCAAATACAAAAACAAG+AGG | - | chr3.1:41292972-41292991 | None:intergenic | 30.0% | |
| ATTAAACCATACGATTTGTG+TGG | - | chr3.1:41294705-41294724 | None:intergenic | 30.0% | |
| CAAAATCAATGATATGGCAT+GGG | + | chr3.1:41292055-41292074 | MS.gene064573:intron | 30.0% | |
| CAACAAAAATGTGAATTAGG+AGG | + | chr3.1:41293964-41293983 | MS.gene064573:intron | 30.0% | |
| CACACACACAAATCATATAA+TGG | - | chr3.1:41293695-41293714 | None:intergenic | 30.0% | |
| CACAGTAGGAATAACATAAA+AGG | - | chr3.1:41293646-41293665 | None:intergenic | 30.0% | |
| CATAAGGATTCAGGAAATAT+GGG | - | chr3.1:41293889-41293908 | None:intergenic | 30.0% | |
| CGAGAAAAATGCACAAAAAT+AGG | - | chr3.1:41293366-41293385 | None:intergenic | 30.0% | |
| CTATATTCAGCATGAAAATG+TGG | - | chr3.1:41293438-41293457 | None:intergenic | 30.0% | |
| GAAATGTTCAATAATGATGG+AGG | - | chr3.1:41295143-41295162 | None:intergenic | 30.0% | |
| GATTCAAATGAACATGTAAC+TGG | - | chr3.1:41291654-41291673 | None:intergenic | 30.0% | |
| GCTGAGAATCCTATAAAAAT+TGG | + | chr3.1:41293585-41293604 | MS.gene064573:CDS | 30.0% | |
| GTAGTTTATTGGGGTTATTT+AGG | - | chr3.1:41291536-41291555 | None:intergenic | 30.0% | |
| GTGGAATGCAAATTATTTAG+TGG | + | chr3.1:41292882-41292901 | MS.gene064573:intron | 30.0% | |
| TAAACCGCATATATTTGGAT+CGG | - | chr3.1:41292270-41292289 | None:intergenic | 30.0% | |
| TAATACGTACATAAGGATTC+AGG | - | chr3.1:41293898-41293917 | None:intergenic | 30.0% | |
| TAATCTGTCAATAAGCTTTG+CGG | - | chr3.1:41295992-41296011 | None:intergenic | 30.0% | |
| TAATTGTTGTGATGTGTCAA+CGG | + | chr3.1:41293073-41293092 | MS.gene064573:intron | 30.0% | |
| TACATGGTAGTCATTATTGT+TGG | - | chr3.1:41293313-41293332 | None:intergenic | 30.0% | |
| TCAACAACATACATCATGTT+TGG | - | chr3.1:41295766-41295785 | None:intergenic | 30.0% | |
| TGAAGACAAAAACACATTCA+GGG | - | chr3.1:41293775-41293794 | None:intergenic | 30.0% | |
| TGAGAAAAGTAAAGAGATGA+AGG | + | chr3.1:41290707-41290726 | MS.gene064573:intron | 30.0% | |
| TGTGGAATTGGAATTGAAAT+TGG | - | chr3.1:41291468-41291487 | None:intergenic | 30.0% | |
| TGTTAATTGTGGTGTGTTAA+GGG | - | chr3.1:41291492-41291511 | None:intergenic | 30.0% | |
| TTCAACACAACCATTGTATT+TGG | - | chr3.1:41290779-41290798 | None:intergenic | 30.0% | |
| TTGAACTAAATAGTGAATCG+CGG | + | chr3.1:41294612-41294631 | MS.gene064573:intron | 30.0% | |
| TTGATGTTTGTTTGCTTTCT+TGG | - | chr3.1:41296023-41296042 | None:intergenic | 30.0% | |
| TTGGAATCTAAACAAAGTTC+CGG | + | chr3.1:41292766-41292785 | MS.gene064573:intron | 30.0% | |
| TTGTTAATTGTGGTGTGTTA+AGG | - | chr3.1:41291493-41291512 | None:intergenic | 30.0% | |
| ! | AACTGTTGATGAAAAGTTTG+AGG | - | chr3.1:41296058-41296077 | None:intergenic | 30.0% |
| ! | CAAATTCGTTGTAATTTTCG+TGG | + | chr3.1:41292863-41292882 | MS.gene064573:intron | 30.0% |
| ! | CATTATATGATTTGTGTGTG+TGG | + | chr3.1:41293693-41293712 | MS.gene064573:intron | 30.0% |
| ! | CGCAAAAAACCGAATATTTT+TGG | - | chr3.1:41292640-41292659 | None:intergenic | 30.0% |
| ! | TTAAAAGAAGAGTTTTCGTG+GGG | - | chr3.1:41296094-41296113 | None:intergenic | 30.0% |
| !! | ATATGCGGTTTAATTTGGAT+CGG | + | chr3.1:41292278-41292297 | MS.gene064573:intron | 30.0% |
| !!! | AAGCTGTTTTGGAGTAATTA+TGG | - | chr3.1:41295642-41295661 | None:intergenic | 30.0% |
| !!! | CGAATATTTTTGGATGTGTT+TGG | - | chr3.1:41292630-41292649 | None:intergenic | 30.0% |
| !!! | GAATCTTTGGTTTTTTTGAC+TGG | + | chr3.1:41292031-41292050 | MS.gene064573:intron | 30.0% |
| !!! | GCGTGATTTTTATTTTGGAT+CGG | - | chr3.1:41292199-41292218 | None:intergenic | 30.0% |
| !!! | GTTTAATTTGGATCGGTTTT+TGG | + | chr3.1:41292285-41292304 | MS.gene064573:intron | 30.0% |
| !!! | TTCACGGTTTTATTTTGGAT+CGG | + | chr3.1:41292682-41292701 | MS.gene064573:intron | 30.0% |
| !!! | TTTAATTTTGTGGTTCGGTT+TGG | + | chr3.1:41292565-41292584 | MS.gene064573:intron | 30.0% |
| AAAATGTGAATTAGGAGGGT+TGG | + | chr3.1:41293969-41293988 | MS.gene064573:intron | 35.0% | |
| AAATCAATGATATGGCATGG+GGG | + | chr3.1:41292057-41292076 | MS.gene064573:intron | 35.0% | |
| AAATCCACATTTACAAGACC+AGG | - | chr3.1:41295235-41295254 | None:intergenic | 35.0% | |
| AAATCGCTAATATTACAGGG+AGG | - | chr3.1:41291976-41291995 | None:intergenic | 35.0% | |
| AACACTTAGTAGTTGTGCAA+TGG | + | chr3.1:41290810-41290829 | MS.gene064573:intron | 35.0% | |
| AATCGCTAATATTACAGGGA+GGG | - | chr3.1:41291975-41291994 | None:intergenic | 35.0% | |
| ACAAACATCAACTCCGTTAA+AGG | + | chr3.1:41296032-41296051 | MS.gene064573:CDS | 35.0% | |
| ACACTTAGTAGTTGTGCAAT+GGG | + | chr3.1:41290811-41290830 | MS.gene064573:intron | 35.0% | |
| ACATGTTGAATGCTGAAAAG+TGG | + | chr3.1:41290888-41290907 | MS.gene064573:intron | 35.0% | |
| ACCGAAATCGCTAATATTAC+AGG | - | chr3.1:41291980-41291999 | None:intergenic | 35.0% | |
| ACTATTGCTAATGCTCTTCA+TGG | + | chr3.1:41294177-41294196 | MS.gene064573:CDS | 35.0% | |
| AGAGGAAGAGAGTAGTTTAT+TGG | - | chr3.1:41291547-41291566 | None:intergenic | 35.0% | |
| AGGAAAAGACATAACTCTTC+AGG | + | chr3.1:41295420-41295439 | MS.gene064573:CDS | 35.0% | |
| AGGAAGAGAGTAGTTTATTG+GGG | - | chr3.1:41291545-41291564 | None:intergenic | 35.0% | |
| ATGTGCGATTGTGATAACTT+TGG | + | chr3.1:41291865-41291884 | MS.gene064573:intron | 35.0% | |
| CAAGATTACTGAAATTGGGT+GGG | - | chr3.1:41294477-41294496 | None:intergenic | 35.0% | |
| CAATTTATGACATGTCCGTA+AGG | + | chr3.1:41295600-41295619 | MS.gene064573:intron | 35.0% | |
| CCCTGTAATATTAGCGATTT+CGG | + | chr3.1:41291976-41291995 | MS.gene064573:intron | 35.0% | |
| CCGAAATCGCTAATATTACA+GGG | - | chr3.1:41291979-41291998 | None:intergenic | 35.0% | |
| CGGAATAATGAGTTTGAATC+CGG | + | chr3.1:41291935-41291954 | MS.gene064573:intron | 35.0% | |
| CTTATTGACAGATTACCTGT+GGG | + | chr3.1:41295997-41296016 | MS.gene064573:CDS | 35.0% | |
| GAGAAGAATTGGGAATTTAG+GGG | - | chr3.1:41291426-41291445 | None:intergenic | 35.0% | |
| GAGGAAGAGAGTAGTTTATT+GGG | - | chr3.1:41291546-41291565 | None:intergenic | 35.0% | |
| GATTTAGTGTTTGTAACTGC+TGG | + | chr3.1:41294204-41294223 | MS.gene064573:CDS | 35.0% | |
| GCAATGGAAGAGAAGATAAA+TGG | + | chr3.1:41290734-41290753 | MS.gene064573:intron | 35.0% | |
| GCACATAAGACCAAATACAA+TGG | + | chr3.1:41290766-41290785 | MS.gene064573:intron | 35.0% | |
| GGAGAAGAATTGGGAATTTA+GGG | - | chr3.1:41291427-41291446 | None:intergenic | 35.0% | |
| GGTAGATTGCAAAGAGAAAT+AGG | + | chr3.1:41295086-41295105 | MS.gene064573:intron | 35.0% | |
| GTGAAGACAAAAACACATTC+AGG | - | chr3.1:41293776-41293795 | None:intergenic | 35.0% | |
| GTTTAACCACACAAATCGTA+TGG | + | chr3.1:41294696-41294715 | MS.gene064573:intron | 35.0% | |
| GTTTACCCCCTGTAATATTA+GGG | - | chr3.1:41292796-41292815 | None:intergenic | 35.0% | |
| TCAAGATTACTGAAATTGGG+TGG | - | chr3.1:41294478-41294497 | None:intergenic | 35.0% | |
| TCCAAAATAAAAATCACGCG+CGG | + | chr3.1:41292200-41292219 | MS.gene064573:intron | 35.0% | |
| TGAGAAATGGTTTGATTGTG+AGG | + | chr3.1:41291902-41291921 | MS.gene064573:intron | 35.0% | |
| TGCTAGAGTGAATAAGAACA+AGG | + | chr3.1:41291344-41291363 | MS.gene064573:intron | 35.0% | |
| TGGAATTGGAATTGGGAAAT+GGG | - | chr3.1:41291448-41291467 | None:intergenic | 35.0% | |
| TGTGAGTTAAAGTTCCACAT+TGG | + | chr3.1:41293134-41293153 | MS.gene064573:intron | 35.0% | |
| TGTTGATATTGTGCATCTGT+TGG | + | chr3.1:41295780-41295799 | MS.gene064573:intron | 35.0% | |
| TGTTTACCCCCTGTAATATT+AGG | - | chr3.1:41292797-41292816 | None:intergenic | 35.0% | |
| TTATGCACTGTTGTCAATTG+TGG | + | chr3.1:41294510-41294529 | MS.gene064573:intron | 35.0% | |
| TTGGAATTGGAATTGGGAAA+TGG | - | chr3.1:41291449-41291468 | None:intergenic | 35.0% | |
| TTTACCCCCTGTAATATTAG+GGG | - | chr3.1:41292795-41292814 | None:intergenic | 35.0% | |
| TTTGTCTTCACTCAACGAAA+AGG | + | chr3.1:41293785-41293804 | MS.gene064573:intron | 35.0% | |
| ! | AGGAGCTCTCCAATTTTTAT+AGG | - | chr3.1:41293597-41293616 | None:intergenic | 35.0% |
| ! | CATTTTTCTCTCAAGTGTGT+TGG | - | chr3.1:41293099-41293118 | None:intergenic | 35.0% |
| ! | GAAAAGTTTGAGGCCTTTAA+CGG | - | chr3.1:41296048-41296067 | None:intergenic | 35.0% |
| ! | GATCTGTAAGTAGCATCTTT+TGG | - | chr3.1:41295963-41295982 | None:intergenic | 35.0% |
| ! | GGATTTTGCTGATGTAAAAG+CGG | + | chr3.1:41295249-41295268 | MS.gene064573:CDS | 35.0% |
| ! | GGGTTTGCTTATATGAGAAA+TGG | + | chr3.1:41291889-41291908 | MS.gene064573:intron | 35.0% |
| ! | TGTAAGTAGCATCTTTTGGA+AGG | - | chr3.1:41295959-41295978 | None:intergenic | 35.0% |
| ! | TTTGCGGTTTTCGGTTTTTT+TGG | + | chr3.1:41292654-41292673 | MS.gene064573:intron | 35.0% |
| !! | ATTAAAGTTGTTGGTGTTGG+TGG | + | chr3.1:41291690-41291709 | MS.gene064573:intron | 35.0% |
| !! | CGAATTTGCTATTGGTTTAG+TGG | - | chr3.1:41292851-41292870 | None:intergenic | 35.0% |
| !!! | ATCGGTTCACGGTTTTATTT+TGG | + | chr3.1:41292677-41292696 | MS.gene064573:intron | 35.0% |
| !!! | ATTCGGTTTTTTGCGGTTTT+CGG | + | chr3.1:41292645-41292664 | MS.gene064573:intron | 35.0% |
| !!! | GCTTTGAGGATATTTTTCAG+TGG | + | chr3.1:41294791-41294810 | MS.gene064573:intron | 35.0% |
| !!! | GGTTCGTTTTGGTTTTGAAA+AGG | + | chr3.1:41292586-41292605 | MS.gene064573:intron | 35.0% |
| !!! | GGTTTTATTTTGGATCGGTT+TGG | + | chr3.1:41292687-41292706 | MS.gene064573:intron | 35.0% |
| !!! | GGTTTTCGGTTTTTTTGGAT+CGG | + | chr3.1:41292659-41292678 | MS.gene064573:intron | 35.0% |
| AATAAAAATCACGCGCGGTT+CGG | + | chr3.1:41292205-41292224 | MS.gene064573:intron | 40.0% | |
| AATGCTGTTAACCGCATGAT+TGG | + | chr3.1:41291723-41291742 | MS.gene064573:intron | 40.0% | |
| AATTGGAGTGGGAATTGAAG+AGG | - | chr3.1:41291565-41291584 | None:intergenic | 40.0% | |
| AATTTCCAATTGGGCACAGT+AGG | - | chr3.1:41293660-41293679 | None:intergenic | 40.0% | |
| ACATGGCTAGATCATCACAT+TGG | - | chr3.1:41293272-41293291 | None:intergenic | 40.0% | |
| ACCAGGTATCTGTAGAAAGA+TGG | - | chr3.1:41295218-41295237 | None:intergenic | 40.0% | |
| AGACCTAACCAATCATGTTC+TGG | - | chr3.1:41293343-41293362 | None:intergenic | 40.0% | |
| AGCAATCACACAAAGTGAGT+TGG | - | chr3.1:41293243-41293262 | None:intergenic | 40.0% | |
| AGCTGCAGATGATTTGATTG+TGG | + | chr3.1:41294069-41294088 | MS.gene064573:intron | 40.0% | |
| AGTAGTGTGAGAAATTGGAG+TGG | - | chr3.1:41291577-41291596 | None:intergenic | 40.0% | |
| AGTGTTTGTAACTGCTGGTA+TGG | + | chr3.1:41294209-41294228 | MS.gene064573:CDS | 40.0% | |
| ATATTTGGATCGGATCGGTT+CGG | - | chr3.1:41292260-41292279 | None:intergenic | 40.0% | |
| ATCAGACCTGTTAGTGCAAA+TGG | - | chr3.1:41295510-41295529 | None:intergenic | 40.0% | |
| ATCGCTAATATTACAGGGAG+GGG | - | chr3.1:41291974-41291993 | None:intergenic | 40.0% | |
| ATGTCAAGCAGACGATCATT+TGG | - | chr3.1:41294897-41294916 | None:intergenic | 40.0% | |
| CACTTAGTAGTTGTGCAATG+GGG | + | chr3.1:41290812-41290831 | MS.gene064573:intron | 40.0% | |
| CATCTATTCAGTCAGCTACT+GGG | + | chr3.1:41295377-41295396 | MS.gene064573:CDS | 40.0% | |
| CATCTTCACCCAAAACCTTA+AGG | - | chr3.1:41293214-41293233 | None:intergenic | 40.0% | |
| CCAGGTATCTGTAGAAAGAT+GGG | - | chr3.1:41295217-41295236 | None:intergenic | 40.0% | |
| CCTGTAATATTAGGGGTTTC+CGG | - | chr3.1:41292788-41292807 | None:intergenic | 40.0% | |
| CGATCCGATCCAAATATATG+CGG | + | chr3.1:41292263-41292282 | MS.gene064573:intron | 40.0% | |
| CGATTTGTGTGGTTAAACAG+TGG | - | chr3.1:41294694-41294713 | None:intergenic | 40.0% | |
| CGCATATATTTGGATCGGAT+CGG | - | chr3.1:41292265-41292284 | None:intergenic | 40.0% | |
| CGGAAACCCCTAATATTACA+GGG | + | chr3.1:41292786-41292805 | MS.gene064573:intron | 40.0% | |
| CTGAGAGTAGTGTGAGAAAT+TGG | - | chr3.1:41291582-41291601 | None:intergenic | 40.0% | |
| GAAACCCCTAATATTACAGG+GGG | + | chr3.1:41292788-41292807 | MS.gene064573:intron | 40.0% | |
| GAGGAACAATCTACTGATCT+AGG | - | chr3.1:41295124-41295143 | None:intergenic | 40.0% | |
| GATTGTGAGGACATTCTATG+CGG | + | chr3.1:41291915-41291934 | MS.gene064573:intron | 40.0% | |
| GCGATTGTGATAACTTTGGT+GGG | + | chr3.1:41291869-41291888 | MS.gene064573:intron | 40.0% | |
| GCTTATTGACAGATTACCTG+TGG | + | chr3.1:41295996-41296015 | MS.gene064573:CDS | 40.0% | |
| GGAAACCCCTAATATTACAG+GGG | + | chr3.1:41292787-41292806 | MS.gene064573:intron | 40.0% | |
| GGAAGTGAATAGAGTTTCTC+AGG | + | chr3.1:41295441-41295460 | MS.gene064573:CDS | 40.0% | |
| GGGAGAAGAATTGGGAATTT+AGG | - | chr3.1:41291428-41291447 | None:intergenic | 40.0% | |
| GTAGTGTGAGAAATTGGAGT+GGG | - | chr3.1:41291576-41291595 | None:intergenic | 40.0% | |
| GTCATTCCATTTGCACTAAC+AGG | + | chr3.1:41295501-41295520 | MS.gene064573:intron | 40.0% | |
| GTCGAAGTTGAGCAACATAT+AGG | + | chr3.1:41293165-41293184 | MS.gene064573:intron | 40.0% | |
| GTGTTTGTAACTGCTGGTAT+GGG | + | chr3.1:41294210-41294229 | MS.gene064573:CDS | 40.0% | |
| TCATCTATTCAGTCAGCTAC+TGG | + | chr3.1:41295376-41295395 | MS.gene064573:CDS | 40.0% | |
| TCCTTCAAAGCTAAAGGGAT+AGG | - | chr3.1:41294316-41294335 | None:intergenic | 40.0% | |
| TGCGATTGTGATAACTTTGG+TGG | + | chr3.1:41291868-41291887 | MS.gene064573:intron | 40.0% | |
| TGGAATAACGCTGTTGCATA+GGG | - | chr3.1:41294662-41294681 | None:intergenic | 40.0% | |
| TGGGAAATGGGAGAAGAATT+GGG | - | chr3.1:41291436-41291455 | None:intergenic | 40.0% | |
| TGGTTAAACAGTGGCTATAG+CGG | - | chr3.1:41294685-41294704 | None:intergenic | 40.0% | |
| TGTGTTAAGGGTTGTGGAAT+TGG | - | chr3.1:41291480-41291499 | None:intergenic | 40.0% | |
| TTACTGAAATTGGGTGGGAA+TGG | - | chr3.1:41294472-41294491 | None:intergenic | 40.0% | |
| TTATTCCTACTGTGCCCAAT+TGG | + | chr3.1:41293652-41293671 | MS.gene064573:intron | 40.0% | |
| TTCGACTCTTTCATCCAATG+TGG | - | chr3.1:41293151-41293170 | None:intergenic | 40.0% | |
| TTGAGCAACATATAGGTGAG+AGG | + | chr3.1:41293172-41293191 | MS.gene064573:intron | 40.0% | |
| TTGCGTCCTTCAAAGCTAAA+GGG | - | chr3.1:41294321-41294340 | None:intergenic | 40.0% | |
| TTGGGAAATGGGAGAAGAAT+TGG | - | chr3.1:41291437-41291456 | None:intergenic | 40.0% | |
| TTTGATAGAGATGCAGGTAC+TGG | + | chr3.1:41294108-41294127 | MS.gene064573:intron | 40.0% | |
| TTTGCACTAACAGGTCTGAT+TGG | + | chr3.1:41295510-41295529 | MS.gene064573:intron | 40.0% | |
| TTTGCGTCCTTCAAAGCTAA+AGG | - | chr3.1:41294322-41294341 | None:intergenic | 40.0% | |
| ! | AACCCAATGCCTTAAGGTTT+TGG | + | chr3.1:41293202-41293221 | MS.gene064573:intron | 40.0% |
| ! | AAGAGATGAAGGAAGTGCAA+TGG | + | chr3.1:41290718-41290737 | MS.gene064573:intron | 40.0% |
| ! | ACCAGCTTCTTTTGATATCC+TGG | - | chr3.1:41294271-41294290 | None:intergenic | 40.0% |
| ! | ACCCAAAACCTTAAGGCATT+GGG | - | chr3.1:41293207-41293226 | None:intergenic | 40.0% |
| ! | ACCCAATGCCTTAAGGTTTT+GGG | + | chr3.1:41293203-41293222 | MS.gene064573:intron | 40.0% |
| ! | AGATGCTACTTACAGATCCA+AGG | + | chr3.1:41295965-41295984 | MS.gene064573:CDS | 40.0% |
| ! | ATGGTTAGCCAGAACATGAT+TGG | + | chr3.1:41293332-41293351 | MS.gene064573:intron | 40.0% |
| ! | ATGTTCTGGCTAACCATACA+TGG | - | chr3.1:41293329-41293348 | None:intergenic | 40.0% |
| ! | GATGCTACTTACAGATCCAA+GGG | + | chr3.1:41295966-41295985 | MS.gene064573:CDS | 40.0% |
| ! | GCTACTTTGGCACCTTTAAT+TGG | + | chr3.1:41295352-41295371 | MS.gene064573:CDS | 40.0% |
| ! | TACTGGTGGTAATCCACTTT+TGG | + | chr3.1:41294125-41294144 | MS.gene064573:CDS | 40.0% |
| ! | TAGCCAGAACATGATTGGTT+AGG | + | chr3.1:41293337-41293356 | MS.gene064573:intron | 40.0% |
| ! | TATCGACAACTTGCTTGTGT+AGG | + | chr3.1:41293856-41293875 | MS.gene064573:intron | 40.0% |
| ! | TTTTGGACCTTCATGACTAG+GGG | - | chr3.1:41292722-41292741 | None:intergenic | 40.0% |
| ! | TTTTGGATGTGTTTGGGGAT+CGG | - | chr3.1:41292623-41292642 | None:intergenic | 40.0% |
| !! | ACCGCGCGTGATTTTTATTT+TGG | - | chr3.1:41292204-41292223 | None:intergenic | 40.0% |
| !! | ACCTATCCCTTTAGCTTTGA+AGG | + | chr3.1:41294312-41294331 | MS.gene064573:CDS | 40.0% |
| !! | ACTGGTGGTAATCCACTTTT+GGG | + | chr3.1:41294126-41294145 | MS.gene064573:CDS | 40.0% |
| !! | AGACTGAAAGCATCTGTAAG+AGG | - | chr3.1:41294936-41294955 | None:intergenic | 40.0% |
| !! | GATACCTGGTCTTGTAAATG+TGG | + | chr3.1:41295228-41295247 | MS.gene064573:intron | 40.0% |
| !! | GTTTTGGACCTTCATGACTA+GGG | - | chr3.1:41292723-41292742 | None:intergenic | 40.0% |
| !!! | GGTTTTTTTGGATCGGTTCA+CGG | + | chr3.1:41292666-41292685 | MS.gene064573:intron | 40.0% |
| !!! | TAAGGTTTTGGGTGAAGATG+TGG | + | chr3.1:41293214-41293233 | MS.gene064573:intron | 40.0% |
| AAAGCGGTGATGAAAGACTC+TGG | + | chr3.1:41295265-41295284 | MS.gene064573:CDS | 45.0% | |
| ACCTCAAAACCGATCCAAAC+CGG | - | chr3.1:41292166-41292185 | None:intergenic | 45.0% | |
| AGAAATGACACATGCCTGCA+AGG | - | chr3.1:41294349-41294368 | None:intergenic | 45.0% | |
| AGCTGCAGAACAAGCTACTT+TGG | + | chr3.1:41295339-41295358 | MS.gene064573:CDS | 45.0% | |
| ATTACAGGGAGGGGAAAATG+TGG | - | chr3.1:41291965-41291984 | None:intergenic | 45.0% | |
| CACCCAAAACCTTAAGGCAT+TGG | - | chr3.1:41293208-41293227 | None:intergenic | 45.0% | |
| CCCATCTTTCTACAGATACC+TGG | + | chr3.1:41295214-41295233 | MS.gene064573:intron | 45.0% | |
| CCGGAAACCCCTAATATTAC+AGG | + | chr3.1:41292785-41292804 | MS.gene064573:intron | 45.0% | |
| GAAGCTGGTTACTTGACTGT+TGG | + | chr3.1:41294282-41294301 | MS.gene064573:CDS | 45.0% | |
| GCCAGGATATCAAAAGAAGC+TGG | + | chr3.1:41294267-41294286 | MS.gene064573:CDS | 45.0% | |
| GGAATAACGCTGTTGCATAG+GGG | - | chr3.1:41294661-41294680 | None:intergenic | 45.0% | |
| GTAATCCGCAACCAATCATG+CGG | - | chr3.1:41291737-41291756 | None:intergenic | 45.0% | |
| GTCTTCACTCAACGAAAAGG+AGG | + | chr3.1:41293788-41293807 | MS.gene064573:intron | 45.0% | |
| GTGGAATAACGCTGTTGCAT+AGG | - | chr3.1:41294663-41294682 | None:intergenic | 45.0% | |
| TCATTATTGTTGGGCCACGA+GGG | - | chr3.1:41293303-41293322 | None:intergenic | 45.0% | |
| TGTGATGATCTAGCCATGTG+AGG | + | chr3.1:41293273-41293292 | MS.gene064573:intron | 45.0% | |
| TGTGTTTGGGGATCGGATTT+CGG | - | chr3.1:41292616-41292635 | None:intergenic | 45.0% | |
| TTAAACAGTGGCTATAGCGG+TGG | - | chr3.1:41294682-41294701 | None:intergenic | 45.0% | |
| TTGAACACCCCTAGTCATGA+AGG | + | chr3.1:41292712-41292731 | MS.gene064573:intron | 45.0% | |
| TTGTGGTGTGTTAAGGGTTG+TGG | - | chr3.1:41291486-41291505 | None:intergenic | 45.0% | |
| TTTGTAACTGCTGGTATGGG+TGG | + | chr3.1:41294213-41294232 | MS.gene064573:CDS | 45.0% | |
| ! | ATTCTGCTGCAGCTTTTCGA+TGG | - | chr3.1:41294853-41294872 | None:intergenic | 45.0% |
| ! | CATGATTGGTTGCGGATTAC+AGG | + | chr3.1:41291737-41291756 | MS.gene064573:intron | 45.0% |
| ! | GTTAACCGCATGATTGGTTG+CGG | + | chr3.1:41291729-41291748 | MS.gene064573:intron | 45.0% |
| ! | TTCTGCACGGTTTTTACCAG+AGG | - | chr3.1:41295317-41295336 | None:intergenic | 45.0% |
| !! | AAAGTTGTTGGTGTTGGTGG+TGG | + | chr3.1:41291693-41291712 | MS.gene064573:intron | 45.0% |
| !! | ACCTTAAGGCATTGGGTTTG+TGG | - | chr3.1:41293200-41293219 | None:intergenic | 45.0% |
| !! | CCTTAAGGCATTGGGTTTGT+GGG | - | chr3.1:41293199-41293218 | None:intergenic | 45.0% |
| !! | CTGGTGGTAATCCACTTTTG+GGG | + | chr3.1:41294127-41294146 | MS.gene064573:CDS | 45.0% |
| !! | TGGTGGTAATCCACTTTTGG+GGG | + | chr3.1:41294128-41294147 | MS.gene064573:CDS | 45.0% |
| !! | TTTGGTCTTATGTGCTCTCG+TGG | - | chr3.1:41290761-41290780 | None:intergenic | 45.0% |
| !!! | GGTTTTGGACCTTCATGACT+AGG | - | chr3.1:41292724-41292743 | None:intergenic | 45.0% |
| !!! | TGGTTCGGTTTGGTTCGTTT+TGG | + | chr3.1:41292575-41292594 | MS.gene064573:intron | 45.0% |
| AGGACGCAAAAGATCCTTGC+AGG | + | chr3.1:41294332-41294351 | MS.gene064573:CDS | 50.0% | |
| CATGTGACTCTCATTGCCAC+CGG | + | chr3.1:41295922-41295941 | MS.gene064573:CDS | 50.0% | |
| CCCACAAACCCAATGCCTTA+AGG | + | chr3.1:41293196-41293215 | MS.gene064573:intron | 50.0% | |
| CGAAAAGCTGCAGCAGAATG+TGG | + | chr3.1:41294854-41294873 | MS.gene064573:CDS | 50.0% | |
| CTTGGAGTAGGTGTTTCCTC+TGG | + | chr3.1:41295298-41295317 | MS.gene064573:CDS | 50.0% | |
| GAGGGGAAAATGTGGTGAAC+CGG | - | chr3.1:41291957-41291976 | None:intergenic | 50.0% | |
| GGAACTGCAATGCTTGGAGT+AGG | + | chr3.1:41295286-41295305 | MS.gene064573:CDS | 50.0% | |
| GTCATTATTGTTGGGCCACG+AGG | - | chr3.1:41293304-41293323 | None:intergenic | 50.0% | |
| GTTCTGCAGCTTCTTCTGCA+CGG | - | chr3.1:41295330-41295349 | None:intergenic | 50.0% | |
| TCAATAAGCTTTGCGGCCCT+TGG | - | chr3.1:41295985-41296004 | None:intergenic | 50.0% | |
| TGTTTGCTTTCTTGGCCCAC+AGG | - | chr3.1:41296015-41296034 | None:intergenic | 50.0% | |
| TTGATATCCTGGCCACGACT+GGG | - | chr3.1:41294260-41294279 | None:intergenic | 50.0% | |
| TTGGAAGGACTGTGAGAAGC+CGG | - | chr3.1:41295944-41295963 | None:intergenic | 50.0% | |
| TTTGATATCCTGGCCACGAC+TGG | - | chr3.1:41294261-41294280 | None:intergenic | 50.0% | |
| ! | CGACAACTTGCTTGTGTAGG+TGG | + | chr3.1:41293859-41293878 | MS.gene064573:intron | 50.0% |
| !! | ACCACTTGGTGCTTGCTAGT+TGG | + | chr3.1:41290923-41290942 | MS.gene064573:intron | 50.0% |
| !! | GACTCTGGAACTGCAATGCT+TGG | + | chr3.1:41295280-41295299 | MS.gene064573:CDS | 50.0% |
| !! | GATAGAGATGCAGGTACTGG+TGG | + | chr3.1:41294111-41294130 | MS.gene064573:intron | 50.0% |
| !! | TCCTGACTCGTGGATTAGGT+CGG | + | chr3.1:41293613-41293632 | MS.gene064573:intron | 50.0% |
| !! | TGGCTTTAAACGACGTCGCA+GGG | - | chr3.1:41291634-41291653 | None:intergenic | 50.0% |
| !! | TTTCGATGGCTTCTAGAGCC+TGG | - | chr3.1:41294839-41294858 | None:intergenic | 50.0% |
| !!! | TCCGGTTTGGATCGGTTTTG+AGG | + | chr3.1:41292162-41292181 | MS.gene064573:intron | 50.0% |
| GCCAACTAGCAAGCACCAAG+TGG | - | chr3.1:41290927-41290946 | None:intergenic | 55.0% | |
| GGCTGAAAACGCAGACCACT+TGG | + | chr3.1:41290909-41290928 | MS.gene064573:intron | 55.0% | |
| GTAACTGCTGGTATGGGTGG+AGG | + | chr3.1:41294216-41294235 | MS.gene064573:CDS | 55.0% | |
| GTTGTTGACGAGCGCTACAG+CGG | + | chr3.1:41295892-41295911 | MS.gene064573:CDS | 55.0% | |
| TCCGACCTAATCCACGAGTC+AGG | - | chr3.1:41293617-41293636 | None:intergenic | 55.0% | |
| TGATATCCTGGCCACGACTG+GGG | - | chr3.1:41294259-41294278 | None:intergenic | 55.0% | |
| TTGTTGACGAGCGCTACAGC+GGG | + | chr3.1:41295893-41295912 | MS.gene064573:CDS | 55.0% | |
| TTTGGGGGAACAAGCTGCTG+AGG | + | chr3.1:41294143-41294162 | MS.gene064573:CDS | 55.0% | |
| ! | ATTGGAGAGCTCCTGACTCG+TGG | + | chr3.1:41293603-41293622 | MS.gene064573:CDS | 55.0% |
| ! | GACGTCGCAGGGGTTTTCTA+GGG | - | chr3.1:41291623-41291642 | None:intergenic | 55.0% |
| ! | GAGCTCCTGACTCGTGGATT+AGG | + | chr3.1:41293609-41293628 | MS.gene064573:CDS | 55.0% |
| ! | GCAGCTTGTTCCCCCAAAAG+TGG | - | chr3.1:41294141-41294160 | None:intergenic | 55.0% |
| !! | AAATCACGCGCGGTTCGGTT+CGG | + | chr3.1:41292210-41292229 | MS.gene064573:intron | 55.0% |
| !! | CTGGCTTTAAACGACGTCGC+AGG | - | chr3.1:41291635-41291654 | None:intergenic | 55.0% |
| !! | CTTGGTGCTTGCTAGTTGGC+TGG | + | chr3.1:41290927-41290946 | MS.gene064573:intron | 55.0% |
| !! | GGCTTTAAACGACGTCGCAG+GGG | - | chr3.1:41291633-41291652 | None:intergenic | 55.0% |
| !! | GTCATGAATAGGGGTGCTCG+CGG | + | chr3.1:41292139-41292158 | MS.gene064573:intron | 55.0% |
| !! | GTTGTTGGTGTTGGTGGTGG+TGG | + | chr3.1:41291696-41291715 | MS.gene064573:intron | 55.0% |
| GAAGGACTGTGAGAAGCCGG+TGG | - | chr3.1:41295941-41295960 | None:intergenic | 60.0% | |
| TGCTGGTATGGGTGGAGGCA+CGG | + | chr3.1:41294221-41294240 | MS.gene064573:CDS | 60.0% | |
| TGTTGACGAGCGCTACAGCG+GGG | + | chr3.1:41295894-41295913 | MS.gene064573:CDS | 60.0% | |
| ! | CGACGTCGCAGGGGTTTTCT+AGG | - | chr3.1:41291624-41291643 | None:intergenic | 60.0% |
| CCACGAGGGAGAGCCTCACA+TGG | - | chr3.1:41293289-41293308 | None:intergenic | 65.0% | |
| CCATGTGAGGCTCTCCCTCG+TGG | + | chr3.1:41293286-41293305 | MS.gene064573:intron | 65.0% | |
| ! | CTGGTATGGGTGGAGGCACG+GGG | + | chr3.1:41294223-41294242 | MS.gene064573:CDS | 65.0% |
| ! | GCTGGTATGGGTGGAGGCAC+GGG | + | chr3.1:41294222-41294241 | MS.gene064573:CDS | 65.0% |
| !! | ACGCGCGGTTCGGTTCGGTT+TGG | + | chr3.1:41292215-41292234 | MS.gene064573:intron | 65.0% |
| !! | GAATAGGGGTGCTCGCGGTC+CGG | + | chr3.1:41292144-41292163 | MS.gene064573:intron | 65.0% |
| !! | GCTCGCGGTCCGGTTTGGAT+CGG | + | chr3.1:41292154-41292173 | MS.gene064573:intron | 65.0% |
| ! | ATGGGTGGAGGCACGGGGTC+TGG | + | chr3.1:41294228-41294247 | MS.gene064573:CDS | 70.0% |
| !! | GTCTGGTGCTGCCCCAGTCG+TGG | + | chr3.1:41294245-41294264 | MS.gene064573:CDS | 70.0% |
| GTGCTGCCCCAGTCGTGGCC+AGG | + | chr3.1:41294250-41294269 | MS.gene064573:CDS | 75.0% | |
| ! | GGGGTGCTCGCGGTCCGGTT+TGG | + | chr3.1:41292149-41292168 | MS.gene064573:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 41290673 | 41296113 | 41290673 | ID=MS.gene064573 |
| chr3.1 | mRNA | 41290673 | 41296113 | 41290673 | ID=MS.gene064573.t1;Parent=MS.gene064573 |
| chr3.1 | exon | 41290673 | 41290714 | 41290673 | ID=MS.gene064573.t1.exon1;Parent=MS.gene064573.t1 |
| chr3.1 | CDS | 41290673 | 41290714 | 41290673 | ID=cds.MS.gene064573.t1;Parent=MS.gene064573.t1 |
| chr3.1 | exon | 41293531 | 41293630 | 41293531 | ID=MS.gene064573.t1.exon2;Parent=MS.gene064573.t1 |
| chr3.1 | CDS | 41293531 | 41293630 | 41293531 | ID=cds.MS.gene064573.t1;Parent=MS.gene064573.t1 |
| chr3.1 | exon | 41294124 | 41294353 | 41294124 | ID=MS.gene064573.t1.exon3;Parent=MS.gene064573.t1 |
| chr3.1 | CDS | 41294124 | 41294353 | 41294124 | ID=cds.MS.gene064573.t1;Parent=MS.gene064573.t1 |
| chr3.1 | exon | 41294840 | 41295007 | 41294840 | ID=MS.gene064573.t1.exon4;Parent=MS.gene064573.t1 |
| chr3.1 | CDS | 41294840 | 41295007 | 41294840 | ID=cds.MS.gene064573.t1;Parent=MS.gene064573.t1 |
| chr3.1 | exon | 41295229 | 41295462 | 41295229 | ID=MS.gene064573.t1.exon5;Parent=MS.gene064573.t1 |
| chr3.1 | CDS | 41295229 | 41295462 | 41295229 | ID=cds.MS.gene064573.t1;Parent=MS.gene064573.t1 |
| chr3.1 | exon | 41295844 | 41296113 | 41295844 | ID=MS.gene064573.t1.exon6;Parent=MS.gene064573.t1 |
| chr3.1 | CDS | 41295844 | 41296113 | 41295844 | ID=cds.MS.gene064573.t1;Parent=MS.gene064573.t1 |
| Gene Sequence |
| Protein sequence |
