Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064663.t1 | XP_013462118.1 | 98.8 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 2.50E-266 | 927.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064663.t1 | Q8RY60 | 66.3 | 466 | 129 | 4 | 1 | 446 | 1 | 458 | 1.6e-157 | 557.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064663.t1 | A0A072V458 | 98.8 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 1.8e-266 | 927.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064663 | MS.gene064542 | PPI |
| MS.gene064663 | MS.gene73119 | PPI |
| MS.gene035805 | MS.gene064663 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064663.t1 | MTR_3g111830 | 98.780 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 0.0 | 995 |
| MS.gene064663.t1 | MTR_4g092610 | 56.440 | 427 | 180 | 3 | 1 | 427 | 1 | 421 | 5.17e-166 | 476 |
| MS.gene064663.t1 | MTR_2g010520 | 56.440 | 427 | 184 | 1 | 1 | 427 | 1 | 425 | 1.87e-161 | 464 |
| MS.gene064663.t1 | MTR_2g010520 | 65.506 | 316 | 109 | 0 | 1 | 316 | 1 | 316 | 5.53e-149 | 429 |
| MS.gene064663.t1 | MTR_4g117360 | 50.575 | 435 | 188 | 9 | 9 | 436 | 31 | 445 | 2.10e-141 | 416 |
| MS.gene064663.t1 | MTR_6g052300 | 43.776 | 482 | 244 | 6 | 4 | 480 | 10 | 469 | 5.29e-139 | 409 |
| MS.gene064663.t1 | MTR_6g045467 | 48.724 | 431 | 182 | 6 | 9 | 434 | 27 | 423 | 1.79e-134 | 397 |
| MS.gene064663.t1 | MTR_6g045467 | 48.724 | 431 | 182 | 6 | 9 | 434 | 27 | 423 | 2.35e-134 | 397 |
| MS.gene064663.t1 | MTR_6g051860 | 57.143 | 301 | 129 | 0 | 7 | 307 | 75 | 375 | 6.80e-126 | 374 |
| MS.gene064663.t1 | MTR_6g045467 | 47.585 | 414 | 178 | 6 | 9 | 417 | 27 | 406 | 6.24e-123 | 366 |
| MS.gene064663.t1 | MTR_2g010520 | 67.568 | 259 | 84 | 0 | 1 | 259 | 1 | 259 | 1.12e-121 | 357 |
| MS.gene064663.t1 | MTR_7g094620 | 46.882 | 433 | 203 | 10 | 9 | 431 | 31 | 446 | 3.16e-117 | 353 |
| MS.gene064663.t1 | MTR_7g010900 | 41.915 | 470 | 223 | 8 | 9 | 462 | 31 | 466 | 1.41e-114 | 347 |
| MS.gene064663.t1 | MTR_6g045467 | 47.042 | 355 | 150 | 5 | 84 | 434 | 1 | 321 | 2.36e-105 | 319 |
| MS.gene064663.t1 | MTR_6g045467 | 46.761 | 355 | 151 | 5 | 84 | 434 | 4 | 324 | 2.49e-105 | 318 |
| MS.gene064663.t1 | MTR_6g045467 | 46.761 | 355 | 151 | 5 | 84 | 434 | 4 | 324 | 4.97e-105 | 318 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064663.t1 | AT1G47330 | 66.667 | 495 | 143 | 5 | 1 | 479 | 1 | 489 | 0.0 | 648 |
| MS.gene064663.t1 | AT1G47330 | 63.285 | 414 | 130 | 5 | 82 | 479 | 1 | 408 | 2.18e-178 | 508 |
| MS.gene064663.t1 | AT2G14520 | 55.581 | 439 | 157 | 4 | 1 | 427 | 1 | 413 | 4.85e-163 | 468 |
| MS.gene064663.t1 | AT2G14520 | 56.613 | 431 | 171 | 4 | 1 | 427 | 1 | 419 | 1.12e-162 | 467 |
| MS.gene064663.t1 | AT2G14520 | 56.613 | 431 | 171 | 4 | 1 | 427 | 1 | 419 | 1.12e-162 | 467 |
| MS.gene064663.t1 | AT4G33700 | 55.972 | 427 | 181 | 3 | 1 | 427 | 1 | 420 | 4.13e-159 | 458 |
| MS.gene064663.t1 | AT5G52790 | 49.550 | 444 | 178 | 3 | 2 | 441 | 3 | 404 | 1.43e-146 | 429 |
| MS.gene064663.t1 | AT5G52790 | 50.000 | 432 | 178 | 4 | 2 | 433 | 3 | 396 | 3.83e-144 | 419 |
| MS.gene064663.t1 | AT5G52790 | 49.519 | 416 | 172 | 4 | 2 | 417 | 3 | 380 | 5.95e-135 | 395 |
| MS.gene064663.t1 | AT5G52790 | 49.519 | 416 | 172 | 4 | 2 | 417 | 3 | 380 | 5.95e-135 | 395 |
| MS.gene064663.t1 | AT5G52790 | 48.931 | 421 | 169 | 3 | 2 | 418 | 3 | 381 | 2.28e-134 | 396 |
| MS.gene064663.t1 | AT4G14230 | 48.148 | 432 | 198 | 6 | 9 | 436 | 30 | 439 | 5.51e-132 | 392 |
| MS.gene064663.t1 | AT4G14240 | 48.843 | 432 | 193 | 7 | 9 | 436 | 31 | 438 | 4.46e-129 | 384 |
| MS.gene064663.t1 | AT4G33700 | 64.769 | 281 | 99 | 0 | 1 | 281 | 1 | 281 | 1.48e-128 | 375 |
| MS.gene064663.t1 | AT1G03270 | 48.506 | 435 | 188 | 10 | 9 | 431 | 29 | 439 | 4.00e-128 | 382 |
| MS.gene064663.t1 | AT4G14240 | 48.148 | 432 | 187 | 8 | 9 | 436 | 31 | 429 | 9.28e-124 | 370 |
| MS.gene064663.t1 | AT4G33700 | 53.198 | 344 | 154 | 3 | 84 | 427 | 1 | 337 | 1.86e-117 | 349 |
| MS.gene064663.t1 | AT2G14520 | 52.874 | 348 | 148 | 4 | 84 | 427 | 1 | 336 | 2.81e-116 | 346 |
| MS.gene064663.t1 | AT4G14240 | 46.927 | 358 | 163 | 6 | 82 | 436 | 1 | 334 | 3.13e-100 | 306 |
Find 105 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTCCAAAGATGAGAATT+AGG | 0.181579 | 3.4:+96962426 | None:intergenic |
| CTTAACAACTGGGAATATTT+TGG | 0.190462 | 3.4:+96962677 | None:intergenic |
| CCATTGTCATTATTGAATTC+AGG | 0.202132 | 3.4:+96961344 | None:intergenic |
| GTTACCCTAATTCTCATCTT+TGG | 0.237922 | 3.4:-96962431 | MS.gene064663:CDS |
| GTTCGCTCTCCTGCATAAAC+TGG | 0.247690 | 3.4:+96961307 | None:intergenic |
| AGCACACCTTACCTTGCTTA+TGG | 0.258974 | 3.4:+96962191 | None:intergenic |
| ACTCTTGGACTCATGTCTTT+AGG | 0.262493 | 3.4:-96962759 | MS.gene064663:CDS |
| AAGGGAAAATGCCTTTGATA+TGG | 0.302600 | 3.4:+96961483 | None:intergenic |
| CTCATGGCTGGTCTCACTCT+TGG | 0.312346 | 3.4:-96962774 | MS.gene064663:CDS |
| AGGAGAGCGAACAAACATTA+TGG | 0.326640 | 3.4:-96961296 | MS.gene064663:CDS |
| TTATGCTGCTGTCTTGATTT+CGG | 0.334551 | 3.4:-96962453 | MS.gene064663:CDS |
| AGTTAACATGAATGCTTCTA+AGG | 0.340623 | 3.4:-96959273 | MS.gene064663:CDS |
| AGATGCTGATTCTTAACAAC+TGG | 0.362278 | 3.4:+96962666 | None:intergenic |
| CCTTCTAATTTAGCAGTTCA+AGG | 0.367178 | 3.4:-96959221 | MS.gene064663:CDS |
| AAACATTATGGGACTTGTTC+TGG | 0.370883 | 3.4:-96961284 | MS.gene064663:intron |
| GCACACCTTACCTTGCTTAT+GGG | 0.393731 | 3.4:+96962192 | None:intergenic |
| TTGTACATATTGATAATCAT+AGG | 0.399731 | 3.4:-96962816 | MS.gene064663:CDS |
| AAAAGTGCTCCCTTGGATAA+AGG | 0.403057 | 3.4:-96960195 | MS.gene064663:intron |
| CTCGAAGTTCTCATCAAATC+TGG | 0.404865 | 3.4:-96962726 | MS.gene064663:CDS |
| CATTGTCATTATTGAATTCA+GGG | 0.415244 | 3.4:+96961345 | None:intergenic |
| CATATTGATAATCATAGGTT+TGG | 0.415652 | 3.4:-96962811 | MS.gene064663:CDS |
| CTCTCCAAAGATGAGAATTA+GGG | 0.416189 | 3.4:+96962427 | None:intergenic |
| TCTCTTTATGGTTGATTCAA+AGG | 0.420745 | 3.4:-96960521 | MS.gene064663:CDS |
| CAGGTGCTTGATCGGATGTT+GGG | 0.423011 | 3.4:-96961805 | MS.gene064663:CDS |
| CCACCCAACGAAGTGGTTGT+TGG | 0.425913 | 3.4:-96959841 | MS.gene064663:CDS |
| GAAAAGCTGCTCTGTTAAAG+AGG | 0.428710 | 3.4:-96961777 | MS.gene064663:CDS |
| ACTTTCCGATATTTGATCAA+TGG | 0.429420 | 3.4:+96959142 | None:intergenic |
| GATGTTGTGGAACTAAATTC+TGG | 0.432619 | 3.4:-96962839 | MS.gene064663:CDS |
| TACCACCATTGATCAAATAT+CGG | 0.434482 | 3.4:-96959147 | MS.gene064663:CDS |
| TGTAATCGAAGAGCTTCTTC+AGG | 0.437035 | 3.4:-96959800 | MS.gene064663:intron |
| CTTGCTTATGGGATAAGCTA+TGG | 0.437062 | 3.4:+96962203 | None:intergenic |
| TTAGAGTTGCATCCAAATCA+AGG | 0.438762 | 3.4:+96961464 | None:intergenic |
| TGCTTCGCTGGTCTCATGGC+TGG | 0.439945 | 3.4:-96962786 | MS.gene064663:CDS |
| ATAGGTTTGGTATGCTTCGC+TGG | 0.451471 | 3.4:-96962798 | MS.gene064663:CDS |
| GGTTGTTGGTGTTATTTCAA+TGG | 0.455509 | 3.4:-96959827 | MS.gene064663:CDS |
| TCTACAGCTACTTCTGCAAC+GGG | 0.456138 | 3.4:-96959176 | MS.gene064663:CDS |
| CCTTGAACTGCTAAATTAGA+AGG | 0.461877 | 3.4:+96959221 | None:intergenic |
| TTCAAGGGCACCGGCTATGA+TGG | 0.468114 | 3.4:+96961540 | None:intergenic |
| GGTATGCTTCGCTGGTCTCA+TGG | 0.469307 | 3.4:-96962790 | MS.gene064663:CDS |
| GGAGAGCGAACAAACATTAT+GGG | 0.473611 | 3.4:-96961295 | MS.gene064663:CDS |
| CACTTCGTTGGGTGGAAACA+CGG | 0.476023 | 3.4:+96959849 | None:intergenic |
| TCAGGTGCTTGATCGGATGT+TGG | 0.476103 | 3.4:-96961806 | MS.gene064663:intron |
| ACACCAACAACCACTTCGTT+GGG | 0.477670 | 3.4:+96959838 | None:intergenic |
| TTGTACACGATACGGATTGA+TGG | 0.481123 | 3.4:-96962277 | MS.gene064663:CDS |
| GCTGTAGAAATCGAATTAGT+TGG | 0.483806 | 3.4:+96959191 | None:intergenic |
| GATCGGAAATTCCTTAGCTA+TGG | 0.485986 | 3.4:-96962625 | MS.gene064663:CDS |
| AGGGAAAATGCCTTTGATAT+GGG | 0.486803 | 3.4:+96961484 | None:intergenic |
| TAAATCTCTACCTTTATCCA+AGG | 0.493315 | 3.4:+96960185 | None:intergenic |
| TTCAGTCAATTCAAGGGCAC+CGG | 0.499613 | 3.4:+96961531 | None:intergenic |
| TAAGAGATGGCTGCAGATGT+AGG | 0.500315 | 3.4:-96962861 | None:intergenic |
| AACACCAACAACCACTTCGT+TGG | 0.500800 | 3.4:+96959837 | None:intergenic |
| GGCTGCAACAGATTTGCATC+AGG | 0.502522 | 3.4:+96959242 | None:intergenic |
| TTGGGTGGAAACACGGGCAA+GGG | 0.503791 | 3.4:+96959856 | None:intergenic |
| CTGAATTCAATAATGACAAT+GGG | 0.509825 | 3.4:-96961343 | MS.gene064663:CDS |
| TTCTACAGCTACTTCTGCAA+CGG | 0.509991 | 3.4:-96959177 | MS.gene064663:CDS |
| TGAGGAACAACTAGAGTTCA+AGG | 0.516832 | 3.4:-96960238 | MS.gene064663:CDS |
| AGTAGAGTCCCAGTTTATGC+AGG | 0.520155 | 3.4:-96961316 | MS.gene064663:CDS |
| TTCGCTCTCCTGCATAAACT+GGG | 0.527846 | 3.4:+96961308 | None:intergenic |
| CATGAATGCTTCTAAGGAGA+AGG | 0.530301 | 3.4:-96959267 | MS.gene064663:CDS |
| TACATATGTAGGTACAGTGT+TGG | 0.530341 | 3.4:-96960013 | MS.gene064663:intron |
| CAAGGACAGCTGTAGGAACA+AGG | 0.530759 | 3.4:-96960220 | MS.gene064663:CDS |
| TGCCTTTGATATGGGAGTCA+TGG | 0.532757 | 3.4:+96961492 | None:intergenic |
| GTTGGGTGGAAACACGGGCA+AGG | 0.534220 | 3.4:+96959855 | None:intergenic |
| GAAATCAAGACAGCAGCATA+AGG | 0.534769 | 3.4:+96962455 | None:intergenic |
| AGGGAGCATTATCAAGGTCC+AGG | 0.534989 | 3.4:+96959875 | None:intergenic |
| CGGAAATTCCTTAGCTATGG+AGG | 0.535191 | 3.4:-96962622 | MS.gene064663:intron |
| TGTTGGTGTTATTTCAATGG+AGG | 0.536577 | 3.4:-96959824 | MS.gene064663:CDS |
| CAAGCTGTTTGTACACGATA+CGG | 0.539871 | 3.4:-96962285 | MS.gene064663:CDS |
| TTGCTTATGGGATAAGCTAT+GGG | 0.544758 | 3.4:+96962204 | None:intergenic |
| CTTGATCGGATGTTGGGTAA+AGG | 0.545868 | 3.4:-96961799 | MS.gene064663:CDS |
| ACTTCGTTGGGTGGAAACAC+GGG | 0.546891 | 3.4:+96959850 | None:intergenic |
| CCTGAATTCAATAATGACAA+TGG | 0.546972 | 3.4:-96961344 | MS.gene064663:CDS |
| CAGATTTGATGAGAACTTCG+AGG | 0.550852 | 3.4:+96962727 | None:intergenic |
| CGGGCAAGGGAGCATTATCA+AGG | 0.558047 | 3.4:+96959869 | None:intergenic |
| CCTAATTCTCATCTTTGGAG+AGG | 0.564389 | 3.4:-96962426 | MS.gene064663:intron |
| AAATCTCTACCTTTATCCAA+GGG | 0.565221 | 3.4:+96960186 | None:intergenic |
| TAGAGTTGCATCCAAATCAA+GGG | 0.567063 | 3.4:+96961465 | None:intergenic |
| AGGTTGTTCATATTGCATCC+TGG | 0.569511 | 3.4:-96959893 | MS.gene064663:CDS |
| TTAAAAGCAGGCGTTGCTGG+TGG | 0.574837 | 3.4:+96959928 | None:intergenic |
| CGTGTTTCCACCCAACGAAG+TGG | 0.574989 | 3.4:-96959848 | MS.gene064663:CDS |
| GATATTTGATCAATGGTGGT+AGG | 0.578278 | 3.4:+96959149 | None:intergenic |
| GCTGCAGATGTAGGATGTTG+TGG | 0.578971 | 3.4:-96962852 | MS.gene064663:CDS |
| AATTGTTACCTCCATAGCTA+AGG | 0.579727 | 3.4:+96962614 | None:intergenic |
| CCAACAACCACTTCGTTGGG+TGG | 0.582637 | 3.4:+96959841 | None:intergenic |
| TGCCATGACTCCCATATCAA+AGG | 0.585212 | 3.4:-96961494 | MS.gene064663:CDS |
| ACACGATACGGATTGATGGT+TGG | 0.586203 | 3.4:-96962273 | MS.gene064663:CDS |
| TCTGCGTAGGCTGGGAAAGG+AGG | 0.586913 | 3.4:-96961586 | MS.gene064663:intron |
| TATCGGAAAGTGAGTCACTC+AGG | 0.588739 | 3.4:-96959130 | MS.gene064663:CDS |
| TTCCGATATTTGATCAATGG+TGG | 0.589597 | 3.4:+96959145 | None:intergenic |
| TATACTGAATGAATTTCAGA+AGG | 0.592402 | 3.4:-96960331 | MS.gene064663:CDS |
| GATGAGACAACCATCATAGC+CGG | 0.601218 | 3.4:-96961550 | MS.gene064663:CDS |
| TAGAGTTCAAGGACAGCTGT+AGG | 0.603806 | 3.4:-96960227 | MS.gene064663:CDS |
| AAAAGCTGCTCTGTTAAAGA+GGG | 0.612879 | 3.4:-96961776 | MS.gene064663:CDS |
| GCGGCATGGATGCGATGTTG+AGG | 0.613691 | 3.4:+96962699 | None:intergenic |
| TCACACGATACTGTGACTGC+TGG | 0.619416 | 3.4:-96959988 | MS.gene064663:CDS |
| AAAAGAAGAACACGAACAAG+CGG | 0.620527 | 3.4:+96962237 | None:intergenic |
| GATGCTGATTCTTAACAACT+GGG | 0.626895 | 3.4:+96962667 | None:intergenic |
| TATCGTGTACAAACAGCTTG+AGG | 0.643312 | 3.4:+96962288 | None:intergenic |
| CATAGCTTATCCCATAAGCA+AGG | 0.643663 | 3.4:-96962202 | MS.gene064663:intron |
| ATCAAGACAGCAGCATAAGG+TGG | 0.647982 | 3.4:+96962458 | None:intergenic |
| ACTGCTGGTAGTAAGATTGA+CGG | 0.652137 | 3.4:-96959973 | MS.gene064663:CDS |
| AAGGACAGCTGTAGGAACAA+GGG | 0.671823 | 3.4:-96960219 | MS.gene064663:CDS |
| ATACTGAATGAATTTCAGAA+GGG | 0.676158 | 3.4:-96960330 | MS.gene064663:CDS |
| TCATTCAGTATATCATACAG+AGG | 0.709636 | 3.4:+96960342 | None:intergenic |
| GCTGGTAGTAAGATTGACGG+CGG | 0.746959 | 3.4:-96959970 | MS.gene064663:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATATCCAAAAAAATTA+AGG | - | chr3.4:96961714-96961733 | MS.gene064663:intron | 15.0% |
| !! | CTATGATAAAAGATAAAATA+AGG | - | chr3.4:96959937-96959956 | MS.gene064663:CDS | 15.0% |
| !!! | AAATTATGGTTTTGATATTT+TGG | - | chr3.4:96961259-96961278 | MS.gene064663:intron | 15.0% |
| !!! | AATTATGGTTTTGATATTTT+GGG | - | chr3.4:96961260-96961279 | MS.gene064663:intron | 15.0% |
| !!! | TAATGGACATTATTATTAAT+CGG | + | chr3.4:96960766-96960785 | None:intergenic | 15.0% |
| !!! | TTATTTATCTATGTGATTTT+AGG | - | chr3.4:96959579-96959598 | MS.gene064663:intron | 15.0% |
| !! | AAAAATGAATTCAGTGAAAA+AGG | + | chr3.4:96959658-96959677 | None:intergenic | 20.0% |
| !! | ACATTATTCACTATATATCA+CGG | + | chr3.4:96961020-96961039 | None:intergenic | 20.0% |
| !! | ACCAATTCATTGTAATTTAA+TGG | - | chr3.4:96961401-96961420 | MS.gene064663:intron | 20.0% |
| !! | ATGAGATAATTTATAACAAG+AGG | + | chr3.4:96960905-96960924 | None:intergenic | 20.0% |
| !! | TGAGATAATTTATAACAAGA+GGG | + | chr3.4:96960904-96960923 | None:intergenic | 20.0% |
| !! | TTATACAAACAAGACTATAA+TGG | + | chr3.4:96959853-96959872 | None:intergenic | 20.0% |
| !! | TTATGATAGAAGACTAATAA+TGG | + | chr3.4:96960783-96960802 | None:intergenic | 20.0% |
| !!! | AAGTTGTTGATATGATTTTA+TGG | - | chr3.4:96961559-96961578 | MS.gene064663:CDS | 20.0% |
| !!! | TTGTACATATTGATAATCAT+AGG | - | chr3.4:96959160-96959179 | MS.gene064663:CDS | 20.0% |
| ! | AAAGTGATCTAATTAAACTG+GGG | + | chr3.4:96962555-96962574 | None:intergenic | 25.0% |
| ! | ACAAAGTGATCTAATTAAAC+TGG | + | chr3.4:96962557-96962576 | None:intergenic | 25.0% |
| ! | ACAATAGCATCAAGAAAAAT+AGG | + | chr3.4:96959497-96959516 | None:intergenic | 25.0% |
| ! | ATACTGAATGAATTTCAGAA+GGG | - | chr3.4:96961646-96961665 | MS.gene064663:intron | 25.0% |
| ! | ATATGAAAAAGAATTTACCG+AGG | + | chr3.4:96961519-96961538 | None:intergenic | 25.0% |
| ! | ATCATACTATAGTAATATGC+AGG | + | chr3.4:96960121-96960140 | None:intergenic | 25.0% |
| ! | ATCCAAAAAAATTAAGGATG+AGG | - | chr3.4:96961720-96961739 | MS.gene064663:intron | 25.0% |
| ! | CAAAGTGATCTAATTAAACT+GGG | + | chr3.4:96962556-96962575 | None:intergenic | 25.0% |
| ! | CATAAACAATAATGATAGTC+AGG | + | chr3.4:96961216-96961235 | None:intergenic | 25.0% |
| ! | CATATGCATGAAATGAAAAT+TGG | - | chr3.4:96961534-96961553 | MS.gene064663:CDS | 25.0% |
| ! | CATTGTCATTATTGAATTCA+GGG | + | chr3.4:96960634-96960653 | None:intergenic | 25.0% |
| ! | CTGAATTCAATAATGACAAT+GGG | - | chr3.4:96960633-96960652 | MS.gene064663:intron | 25.0% |
| ! | GCCATTAAATTACAATGAAT+TGG | + | chr3.4:96961405-96961424 | None:intergenic | 25.0% |
| ! | TACTATTCTTGTAATCATGT+TGG | - | chr3.4:96960829-96960848 | MS.gene064663:intron | 25.0% |
| ! | TATACTGAATGAATTTCAGA+AGG | - | chr3.4:96961645-96961664 | MS.gene064663:intron | 25.0% |
| ! | TATAGTGAATAATGTTTGTG+AGG | - | chr3.4:96961025-96961044 | MS.gene064663:intron | 25.0% |
| !! | AATAAGTTGAAAACAGCTTA+TGG | - | chr3.4:96960001-96960020 | MS.gene064663:CDS | 25.0% |
| !! | AATTAGATCACTTTGTTGTA+TGG | - | chr3.4:96962561-96962580 | MS.gene064663:intron | 25.0% |
| !! | ATGAAGATTGTGATATTTTC+AGG | - | chr3.4:96960152-96960171 | MS.gene064663:intron | 25.0% |
| !! | CATATTGATAATCATAGGTT+TGG | - | chr3.4:96959165-96959184 | MS.gene064663:CDS | 25.0% |
| !! | TTACTTTGTACTCTTTTGAT+CGG | - | chr3.4:96959334-96959353 | MS.gene064663:intron | 25.0% |
| !! | TTTTCTCTGTATCCTTAATA+GGG | - | chr3.4:96961870-96961889 | MS.gene064663:intron | 25.0% |
| !! | TTTTTCACTTATATACATCC+AGG | - | chr3.4:96961425-96961444 | MS.gene064663:intron | 25.0% |
| !!! | CTATACTTTCTTGTTTTGTA+AGG | - | chr3.4:96959618-96959637 | MS.gene064663:intron | 25.0% |
| !!! | GGTTTTAAACTTACTTGTTA+TGG | + | chr3.4:96962507-96962526 | None:intergenic | 25.0% |
| !!! | TGTTTTTGAAATATCATCTG+TGG | - | chr3.4:96961847-96961866 | MS.gene064663:intron | 25.0% |
| !!! | TTAATTTTGTTTTTCTGCGT+AGG | - | chr3.4:96960377-96960396 | MS.gene064663:intron | 25.0% |
| !!! | TTCCTCATCCTTAATTTTTT+TGG | + | chr3.4:96961725-96961744 | None:intergenic | 25.0% |
| !!! | TTTTGATGATTATCTCTTTG+AGG | - | chr3.4:96961930-96961949 | MS.gene064663:intron | 25.0% |
| AAAAACATAATGTCAACACG+AGG | + | chr3.4:96961834-96961853 | None:intergenic | 30.0% | |
| AAACAAAAGAACTTGATCAC+AGG | + | chr3.4:96960320-96960339 | None:intergenic | 30.0% | |
| AAATCTCTACCTTTATCCAA+GGG | + | chr3.4:96961793-96961812 | None:intergenic | 30.0% | |
| AAGTGATCTAATTAAACTGG+GGG | + | chr3.4:96962554-96962573 | None:intergenic | 30.0% | |
| ACAATTGCAGCAATAACAAA+TGG | + | chr3.4:96962347-96962366 | None:intergenic | 30.0% | |
| ACATACATGCATAACTATAG+TGG | + | chr3.4:96962216-96962235 | None:intergenic | 30.0% | |
| ACTTTCATAAGACCCTATTA+AGG | + | chr3.4:96961885-96961904 | None:intergenic | 30.0% | |
| ACTTTCCGATATTTGATCAA+TGG | + | chr3.4:96962837-96962856 | None:intergenic | 30.0% | |
| AGTTAACATGAATGCTTCTA+AGG | - | chr3.4:96962703-96962722 | MS.gene064663:CDS | 30.0% | |
| ATCAAATTTGTGTGCATTTC+AGG | - | chr3.4:96962444-96962463 | MS.gene064663:CDS | 30.0% | |
| ATGAGGAAATCATGATTACT+GGG | + | chr3.4:96961588-96961607 | None:intergenic | 30.0% | |
| CCAGGTTAAAAATCTCTTTA+TGG | - | chr3.4:96961443-96961462 | MS.gene064663:intron | 30.0% | |
| CCATTGTCATTATTGAATTC+AGG | + | chr3.4:96960635-96960654 | None:intergenic | 30.0% | |
| CCTGAATTCAATAATGACAA+TGG | - | chr3.4:96960632-96960651 | MS.gene064663:intron | 30.0% | |
| GTATTCAGTTTAGTGTAGTT+TGG | - | chr3.4:96962604-96962623 | MS.gene064663:intron | 30.0% | |
| TAAATCTCTACCTTTATCCA+AGG | + | chr3.4:96961794-96961813 | None:intergenic | 30.0% | |
| TACCACCATTGATCAAATAT+CGG | - | chr3.4:96962829-96962848 | MS.gene064663:CDS | 30.0% | |
| TATCGTCGTTTATTGTTAAC+AGG | - | chr3.4:96960580-96960599 | MS.gene064663:intron | 30.0% | |
| TCATTCAGTATATCATACAG+AGG | + | chr3.4:96961637-96961656 | None:intergenic | 30.0% | |
| TGATCATCAGAAAAATTCCT+CGG | - | chr3.4:96961499-96961518 | MS.gene064663:CDS | 30.0% | |
| ! | AAGACTTTTGTGGATTTTCA+TGG | - | chr3.4:96960231-96960250 | MS.gene064663:CDS | 30.0% |
| ! | AATTTTCTATTACACCACAC+AGG | + | chr3.4:96961295-96961314 | None:intergenic | 30.0% |
| ! | AGTCTTTTCAGTCAATTCAA+GGG | + | chr3.4:96960454-96960473 | None:intergenic | 30.0% |
| ! | CACAATCTTCATATTTTCAC+AGG | + | chr3.4:96960144-96960163 | None:intergenic | 30.0% |
| ! | CCATAAAGAGATTTTTAACC+TGG | + | chr3.4:96961446-96961465 | None:intergenic | 30.0% |
| ! | CTTAACAACTGGGAATATTT+TGG | + | chr3.4:96959302-96959321 | None:intergenic | 30.0% |
| ! | GTTTTCTCTGTATCCTTAAT+AGG | - | chr3.4:96961869-96961888 | MS.gene064663:intron | 30.0% |
| ! | TCTCTTTATGGTTGATTCAA+AGG | - | chr3.4:96961455-96961474 | MS.gene064663:intron | 30.0% |
| ! | TTTGAAATGCATAGTTCAAG+AGG | - | chr3.4:96960271-96960290 | MS.gene064663:CDS | 30.0% |
| !! | AAGAAAATGGATTTTCTGCA+TGG | - | chr3.4:96961331-96961350 | MS.gene064663:CDS | 30.0% |
| !! | CTGATGATCATTTTTCTTAG+AGG | + | chr3.4:96961489-96961508 | None:intergenic | 30.0% |
| !! | GTGATCAAGTTCTTTTGTTT+CGG | - | chr3.4:96960320-96960339 | MS.gene064663:CDS | 30.0% |
| !!! | ATGGTTTTGATATTTTGGGA+AGG | - | chr3.4:96961264-96961283 | MS.gene064663:intron | 30.0% |
| !!! | GTTGTTTTGATAAGCTATCT+TGG | - | chr3.4:96959964-96959983 | MS.gene064663:CDS | 30.0% |
| !!! | TGGTTTTGATATTTTGGGAA+GGG | - | chr3.4:96961265-96961284 | MS.gene064663:intron | 30.0% |
| AAAAGAAGAACACGAACAAG+CGG | + | chr3.4:96959742-96959761 | None:intergenic | 35.0% | |
| AAAAGCTGCTCTGTTAAAGA+GGG | - | chr3.4:96960200-96960219 | MS.gene064663:CDS | 35.0% | |
| AAACGACGATAGAAACATAG+TGG | + | chr3.4:96960571-96960590 | None:intergenic | 35.0% | |
| AAATTTGTGTGCATTTCAGG+AGG | - | chr3.4:96962447-96962466 | MS.gene064663:CDS | 35.0% | |
| AAGGGAAAATGCCTTTGATA+TGG | + | chr3.4:96960496-96960515 | None:intergenic | 35.0% | |
| AAGTTTGTGGTTGATCTACT+CGG | - | chr3.4:96961901-96961920 | MS.gene064663:intron | 35.0% | |
| AATTGTTACCTCCATAGCTA+AGG | + | chr3.4:96959365-96959384 | None:intergenic | 35.0% | |
| AGGGAAAATGCCTTTGATAT+GGG | + | chr3.4:96960495-96960514 | None:intergenic | 35.0% | |
| ATGCATAGTTCAAGAGGAAT+TGG | - | chr3.4:96960277-96960296 | MS.gene064663:CDS | 35.0% | |
| CCTTCTAATTTAGCAGTTCA+AGG | - | chr3.4:96962755-96962774 | MS.gene064663:CDS | 35.0% | |
| CCTTGAACTGCTAAATTAGA+AGG | + | chr3.4:96962758-96962777 | None:intergenic | 35.0% | |
| CGAATTAGCATATAAGACAC+TGG | + | chr3.4:96962422-96962441 | None:intergenic | 35.0% | |
| CTCTCCAAAGATGAGAATTA+GGG | + | chr3.4:96959552-96959571 | None:intergenic | 35.0% | |
| GAAAATTTGTATCGAGTGAC+TGG | - | chr3.4:96961308-96961327 | MS.gene064663:CDS | 35.0% | |
| GATATTTGATCAATGGTGGT+AGG | + | chr3.4:96962830-96962849 | None:intergenic | 35.0% | |
| GATGAGGAAATCATGATTAC+TGG | + | chr3.4:96961589-96961608 | None:intergenic | 35.0% | |
| GATGTTGTGGAACTAAATTC+TGG | - | chr3.4:96959137-96959156 | MS.gene064663:CDS | 35.0% | |
| GCTGTAGAAATCGAATTAGT+TGG | + | chr3.4:96962788-96962807 | None:intergenic | 35.0% | |
| GGATGCAACTCTAAATTTGT+GGG | - | chr3.4:96960521-96960540 | MS.gene064663:CDS | 35.0% | |
| GTTACCCTAATTCTCATCTT+TGG | - | chr3.4:96959545-96959564 | MS.gene064663:intron | 35.0% | |
| TACATATGTAGGTACAGTGT+TGG | - | chr3.4:96961963-96961982 | MS.gene064663:intron | 35.0% | |
| TAGAGTTGCATCCAAATCAA+GGG | + | chr3.4:96960514-96960533 | None:intergenic | 35.0% | |
| TATGGGATTCATGTTAAGCT+CGG | - | chr3.4:96961175-96961194 | MS.gene064663:intron | 35.0% | |
| TCACAAGACAATTTAGAGAG+TGG | + | chr3.4:96962528-96962547 | None:intergenic | 35.0% | |
| TGCATGGTACATCATAAGAA+TGG | - | chr3.4:96961347-96961366 | MS.gene064663:CDS | 35.0% | |
| TGGATGCAACTCTAAATTTG+TGG | - | chr3.4:96960520-96960539 | MS.gene064663:CDS | 35.0% | |
| TGTTTGTGAGGTTTAATGCT+AGG | - | chr3.4:96961037-96961056 | MS.gene064663:intron | 35.0% | |
| TTAGAGTTGCATCCAAATCA+AGG | + | chr3.4:96960515-96960534 | None:intergenic | 35.0% | |
| TTATGCTGCTGTCTTGATTT+CGG | - | chr3.4:96959523-96959542 | MS.gene064663:intron | 35.0% | |
| TTCCGATATTTGATCAATGG+TGG | + | chr3.4:96962834-96962853 | None:intergenic | 35.0% | |
| TTGCTTATGGGATAAGCTAT+GGG | + | chr3.4:96959775-96959794 | None:intergenic | 35.0% | |
| ! | AAACATTATGGGACTTGTTC+TGG | - | chr3.4:96960692-96960711 | MS.gene064663:intron | 35.0% |
| ! | AATCCCATAAACCTTTTCCT+CGG | + | chr3.4:96961164-96961183 | None:intergenic | 35.0% |
| ! | CAGTCTTTTCAGTCAATTCA+AGG | + | chr3.4:96960455-96960474 | None:intergenic | 35.0% |
| ! | TAGGGTCTTATGAAAGTTTG+TGG | - | chr3.4:96961888-96961907 | MS.gene064663:intron | 35.0% |
| !! | AACAACTGGGAATATTTTGG+CGG | + | chr3.4:96959299-96959318 | None:intergenic | 35.0% |
| !! | AGATGCTGATTCTTAACAAC+TGG | + | chr3.4:96959313-96959332 | None:intergenic | 35.0% |
| !! | ATTCTTTGTTTCTGCACTGA+AGG | - | chr3.4:96960604-96960623 | MS.gene064663:intron | 35.0% |
| !! | GATCCTTGCAAAAAAGTACT+AGG | - | chr3.4:96961133-96961152 | MS.gene064663:intron | 35.0% |
| !! | GATGCTGATTCTTAACAACT+GGG | + | chr3.4:96959312-96959331 | None:intergenic | 35.0% |
| !! | GGTTGTTGGTGTTATTTCAA+TGG | - | chr3.4:96962149-96962168 | MS.gene064663:intron | 35.0% |
| !! | TGTTGGTGTTATTTCAATGG+AGG | - | chr3.4:96962152-96962171 | MS.gene064663:intron | 35.0% |
| !! | TTCTTTGTTTCTGCACTGAA+GGG | - | chr3.4:96960605-96960624 | MS.gene064663:intron | 35.0% |
| !! | TTGAGATTTTGAGTAGACGA+TGG | - | chr3.4:96960730-96960749 | MS.gene064663:intron | 35.0% |
| !!! | AAAGGCATTTTCCCTTGATT+TGG | - | chr3.4:96960500-96960519 | MS.gene064663:CDS | 35.0% |
| !!! | GATATTTTCAGGTGCTTGAT+CGG | - | chr3.4:96960163-96960182 | MS.gene064663:intron | 35.0% |
| AATTTCGAAGTCGCAGTACA+AGG | + | chr3.4:96961244-96961263 | None:intergenic | 40.0% | |
| ACTCTTGGACTCATGTCTTT+AGG | - | chr3.4:96959217-96959236 | MS.gene064663:CDS | 40.0% | |
| ACTGCTGGTAGTAAGATTGA+CGG | - | chr3.4:96962003-96962022 | MS.gene064663:intron | 40.0% | |
| AGCACATATGACAGGAACAT+TGG | + | chr3.4:96962381-96962400 | None:intergenic | 40.0% | |
| AGGAGAGCGAACAAACATTA+TGG | - | chr3.4:96960680-96960699 | MS.gene064663:intron | 40.0% | |
| AGGTTGTTCATATTGCATCC+TGG | - | chr3.4:96962083-96962102 | MS.gene064663:intron | 40.0% | |
| ATCGAGTGACTGGAAGAAAA+TGG | - | chr3.4:96961318-96961337 | MS.gene064663:CDS | 40.0% | |
| ATTATGTGTGTGTCTGTGTG+TGG | - | chr3.4:96959812-96959831 | MS.gene064663:CDS | 40.0% | |
| CAAGCTGTTTGTACACGATA+CGG | - | chr3.4:96959691-96959710 | MS.gene064663:intron | 40.0% | |
| CACACAGACACACACATAAT+TGG | + | chr3.4:96959812-96959831 | None:intergenic | 40.0% | |
| CAGATTTGATGAGAACTTCG+AGG | + | chr3.4:96959252-96959271 | None:intergenic | 40.0% | |
| CATAGCTTATCCCATAAGCA+AGG | - | chr3.4:96959774-96959793 | MS.gene064663:intron | 40.0% | |
| CCTCTCCAAAGATGAGAATT+AGG | + | chr3.4:96959553-96959572 | None:intergenic | 40.0% | |
| CTCGAAGTTCTCATCAAATC+TGG | - | chr3.4:96959250-96959269 | MS.gene064663:CDS | 40.0% | |
| CTTATCCCATAAGCAAGGTA+AGG | - | chr3.4:96959779-96959798 | MS.gene064663:intron | 40.0% | |
| CTTGCTTATGGGATAAGCTA+TGG | + | chr3.4:96959776-96959795 | None:intergenic | 40.0% | |
| GAAAAGCTGCTCTGTTAAAG+AGG | - | chr3.4:96960199-96960218 | MS.gene064663:CDS | 40.0% | |
| GAAACAACAGCACATATGAC+AGG | + | chr3.4:96962389-96962408 | None:intergenic | 40.0% | |
| GAAATCAAGACAGCAGCATA+AGG | + | chr3.4:96959524-96959543 | None:intergenic | 40.0% | |
| GATCAAGTCATGACTAATGC+AGG | - | chr3.4:96962675-96962694 | MS.gene064663:CDS | 40.0% | |
| GATCGGAAATTCCTTAGCTA+TGG | - | chr3.4:96959351-96959370 | MS.gene064663:intron | 40.0% | |
| GGAGAGCGAACAAACATTAT+GGG | - | chr3.4:96960681-96960700 | MS.gene064663:intron | 40.0% | |
| GTACTGCGACTTCGAAATTA+TGG | - | chr3.4:96961245-96961264 | MS.gene064663:intron | 40.0% | |
| GTGACTGTTGGTACATATGT+AGG | - | chr3.4:96961952-96961971 | MS.gene064663:intron | 40.0% | |
| GTGAGGTTTAATGCTAGGAT+TGG | - | chr3.4:96961042-96961061 | MS.gene064663:intron | 40.0% | |
| TATCGTGTACAAACAGCTTG+AGG | + | chr3.4:96959691-96959710 | None:intergenic | 40.0% | |
| TGAAACACTGCAGAATGATG+AGG | + | chr3.4:96961605-96961624 | None:intergenic | 40.0% | |
| TGAGGAACAACTAGAGTTCA+AGG | - | chr3.4:96961738-96961757 | MS.gene064663:CDS | 40.0% | |
| TGTAATCGAAGAGCTTCTTC+AGG | - | chr3.4:96962176-96962195 | MS.gene064663:intron | 40.0% | |
| TTCTACAGCTACTTCTGCAA+CGG | - | chr3.4:96962799-96962818 | MS.gene064663:CDS | 40.0% | |
| ! | CATGAATGCTTCTAAGGAGA+AGG | - | chr3.4:96962709-96962728 | MS.gene064663:CDS | 40.0% |
| ! | CCTAATTCTCATCTTTGGAG+AGG | - | chr3.4:96959550-96959569 | MS.gene064663:intron | 40.0% |
| ! | TGTGGATTTTCATGGCAATG+AGG | - | chr3.4:96960239-96960258 | MS.gene064663:CDS | 40.0% |
| ! | TTGTACACGATACGGATTGA+TGG | - | chr3.4:96959699-96959718 | MS.gene064663:intron | 40.0% |
| !! | AAAAGTGCTCCCTTGGATAA+AGG | - | chr3.4:96961781-96961800 | MS.gene064663:CDS | 40.0% |
| !! | CAACGCCTGCTTTTAAAAAG+CGG | - | chr3.4:96962055-96962074 | MS.gene064663:intron | 40.0% |
| !! | GCTTTTAAAAAGCGGCATAG+AGG | - | chr3.4:96962063-96962082 | MS.gene064663:intron | 40.0% |
| !! | TATCTCTTTGAGGTGACTGT+TGG | - | chr3.4:96961940-96961959 | MS.gene064663:intron | 40.0% |
| !! | TTGCAAAAAAGTACTAGGCC+TGG | - | chr3.4:96961138-96961157 | MS.gene064663:intron | 40.0% |
| !! | TTTGTTTTTCTGCGTAGGCT+GGG | - | chr3.4:96960382-96960401 | MS.gene064663:intron | 40.0% |
| !! | TTTTTAAAAGCAGGCGTTGC+TGG | + | chr3.4:96962054-96962073 | None:intergenic | 40.0% |
| !!! | AGGCCTAGTACTTTTTTGCA+AGG | + | chr3.4:96961139-96961158 | None:intergenic | 40.0% |
| !!! | CTATGCCGCTTTTTAAAAGC+AGG | + | chr3.4:96962063-96962082 | None:intergenic | 40.0% |
| !!! | GGTGGACTTTTTTTCACTTG+TGG | + | chr3.4:96962033-96962052 | None:intergenic | 40.0% |
| !!! | TTTTGTTTTTCTGCGTAGGC+TGG | - | chr3.4:96960381-96960400 | MS.gene064663:intron | 40.0% |
| AACACCAACAACCACTTCGT+TGG | + | chr3.4:96962142-96962161 | None:intergenic | 45.0% | |
| AAGGACAGCTGTAGGAACAA+GGG | - | chr3.4:96961757-96961776 | MS.gene064663:CDS | 45.0% | |
| ACACCAACAACCACTTCGTT+GGG | + | chr3.4:96962141-96962160 | None:intergenic | 45.0% | |
| AGCACACCTTACCTTGCTTA+TGG | + | chr3.4:96959788-96959807 | None:intergenic | 45.0% | |
| AGTAGAGTCCCAGTTTATGC+AGG | - | chr3.4:96960660-96960679 | MS.gene064663:intron | 45.0% | |
| ATCAAGACAGCAGCATAAGG+TGG | + | chr3.4:96959521-96959540 | None:intergenic | 45.0% | |
| CGGAAATTCCTTAGCTATGG+AGG | - | chr3.4:96959354-96959373 | MS.gene064663:intron | 45.0% | |
| CTTGATCGGATGTTGGGTAA+AGG | - | chr3.4:96960177-96960196 | MS.gene064663:intron | 45.0% | |
| CTTTGTGCTCTCACTTAGCA+TGG | - | chr3.4:96960348-96960367 | MS.gene064663:CDS | 45.0% | |
| GATGAGACAACCATCATAGC+CGG | - | chr3.4:96960426-96960445 | MS.gene064663:intron | 45.0% | |
| GCACACCTTACCTTGCTTAT+GGG | + | chr3.4:96959787-96959806 | None:intergenic | 45.0% | |
| GCTATCTTGGACAGCTTATG+TGG | - | chr3.4:96959977-96959996 | MS.gene064663:CDS | 45.0% | |
| GGCGACAAAGTTTCTCATCT+TGG | - | chr3.4:96962582-96962601 | MS.gene064663:intron | 45.0% | |
| TAGAGTTCAAGGACAGCTGT+AGG | - | chr3.4:96961749-96961768 | MS.gene064663:CDS | 45.0% | |
| TATCGGAAAGTGAGTCACTC+AGG | - | chr3.4:96962846-96962865 | MS.gene064663:CDS | 45.0% | |
| TCTACAGCTACTTCTGCAAC+GGG | - | chr3.4:96962800-96962819 | MS.gene064663:CDS | 45.0% | |
| TGCCATGACTCCCATATCAA+AGG | - | chr3.4:96960482-96960501 | MS.gene064663:CDS | 45.0% | |
| TGCCTTTGATATGGGAGTCA+TGG | + | chr3.4:96960487-96960506 | None:intergenic | 45.0% | |
| TGGCCGAGGAAAAGGTTTAT+GGG | - | chr3.4:96961158-96961177 | MS.gene064663:intron | 45.0% | |
| TTCGCTCTCCTGCATAAACT+GGG | + | chr3.4:96960671-96960690 | None:intergenic | 45.0% | |
| ! | ACACGATACGGATTGATGGT+TGG | - | chr3.4:96959703-96959722 | MS.gene064663:intron | 45.0% |
| ! | ATAGGTTTGGTATGCTTCGC+TGG | - | chr3.4:96959178-96959197 | MS.gene064663:CDS | 45.0% |
| ! | TTCAGTCAATTCAAGGGCAC+CGG | + | chr3.4:96960448-96960467 | None:intergenic | 45.0% |
| ACTTCGTTGGGTGGAAACAC+GGG | + | chr3.4:96962129-96962148 | None:intergenic | 50.0% | |
| CAAGGACAGCTGTAGGAACA+AGG | - | chr3.4:96961756-96961775 | MS.gene064663:CDS | 50.0% | |
| CACTTCGTTGGGTGGAAACA+CGG | + | chr3.4:96962130-96962149 | None:intergenic | 50.0% | |
| CAGGTGCTTGATCGGATGTT+GGG | - | chr3.4:96960171-96960190 | MS.gene064663:intron | 50.0% | |
| CTGGCCGAGGAAAAGGTTTA+TGG | - | chr3.4:96961157-96961176 | MS.gene064663:intron | 50.0% | |
| GCTGCAGATGTAGGATGTTG+TGG | - | chr3.4:96959124-96959143 | MS.gene064663:CDS | 50.0% | |
| GCTGGTAGTAAGATTGACGG+CGG | - | chr3.4:96962006-96962025 | MS.gene064663:intron | 50.0% | |
| GGCTGCAACAGATTTGCATC+AGG | + | chr3.4:96962737-96962756 | None:intergenic | 50.0% | |
| GTTCGCTCTCCTGCATAAAC+TGG | + | chr3.4:96960672-96960691 | None:intergenic | 50.0% | |
| TCACACGATACTGTGACTGC+TGG | - | chr3.4:96961988-96962007 | MS.gene064663:intron | 50.0% | |
| TCAGGTGCTTGATCGGATGT+TGG | - | chr3.4:96960170-96960189 | MS.gene064663:intron | 50.0% | |
| TTGGGAAGGGTTTACCTGTG+TGG | - | chr3.4:96961278-96961297 | MS.gene064663:intron | 50.0% | |
| ! | CATAAACCTTTTCCTCGGCC+AGG | + | chr3.4:96961159-96961178 | None:intergenic | 50.0% |
| ! | GGCAGAGCTCAAGACTTTTG+TGG | - | chr3.4:96960221-96960240 | MS.gene064663:CDS | 50.0% |
| ! | TTAAAAGCAGGCGTTGCTGG+TGG | + | chr3.4:96962051-96962070 | None:intergenic | 50.0% |
| ! | TTTTCTGCGTAGGCTGGGAA+AGG | - | chr3.4:96960387-96960406 | MS.gene064663:intron | 50.0% |
| !! | AGGGAGCATTATCAAGGTCC+AGG | + | chr3.4:96962104-96962123 | None:intergenic | 50.0% |
| !! | CAAGGGAAAAAGTGCTCCCT+TGG | - | chr3.4:96961774-96961793 | MS.gene064663:CDS | 50.0% |
| !!! | CTGGGAATATTTTGGCGGCA+TGG | + | chr3.4:96959294-96959313 | None:intergenic | 50.0% |
| CCAACAACCACTTCGTTGGG+TGG | + | chr3.4:96962138-96962157 | None:intergenic | 55.0% | |
| CCACCCAACGAAGTGGTTGT+TGG | - | chr3.4:96962135-96962154 | MS.gene064663:intron | 55.0% | |
| CGTGTTTCCACCCAACGAAG+TGG | - | chr3.4:96962128-96962147 | MS.gene064663:intron | 55.0% | |
| TTGGGTGGAAACACGGGCAA+GGG | + | chr3.4:96962123-96962142 | None:intergenic | 55.0% | |
| ! | GGTATGCTTCGCTGGTCTCA+TGG | - | chr3.4:96959186-96959205 | MS.gene064663:CDS | 55.0% |
| !! | AAAAGTACTAGGCCTGGCCG+AGG | - | chr3.4:96961144-96961163 | MS.gene064663:intron | 55.0% |
| !! | CGGGCAAGGGAGCATTATCA+AGG | + | chr3.4:96962110-96962129 | None:intergenic | 55.0% |
| !! | CTCATGGCTGGTCTCACTCT+TGG | - | chr3.4:96959202-96959221 | MS.gene064663:CDS | 55.0% |
| !! | TTCAAGGGCACCGGCTATGA+TGG | + | chr3.4:96960439-96960458 | None:intergenic | 55.0% |
| ACTAGGCCTGGCCGAGGAAA+AGG | - | chr3.4:96961150-96961169 | MS.gene064663:intron | 60.0% | |
| GCGGCATGGATGCGATGTTG+AGG | + | chr3.4:96959280-96959299 | None:intergenic | 60.0% | |
| GTTGGGTGGAAACACGGGCA+AGG | + | chr3.4:96962124-96962143 | None:intergenic | 60.0% | |
| TCTGCGTAGGCTGGGAAAGG+AGG | - | chr3.4:96960390-96960409 | MS.gene064663:intron | 60.0% | |
| ! | TGCTTCGCTGGTCTCATGGC+TGG | - | chr3.4:96959190-96959209 | MS.gene064663:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 96959121 | 96962877 | 96959121 | ID=MS.gene064663 |
| chr3.4 | mRNA | 96959121 | 96962877 | 96959121 | ID=MS.gene064663.t1;Parent=MS.gene064663 |
| chr3.4 | exon | 96962623 | 96962877 | 96962623 | ID=MS.gene064663.t1.exon1;Parent=MS.gene064663.t1 |
| chr3.4 | CDS | 96962623 | 96962877 | 96962623 | ID=cds.MS.gene064663.t1;Parent=MS.gene064663.t1 |
| chr3.4 | exon | 96962427 | 96962510 | 96962427 | ID=MS.gene064663.t1.exon2;Parent=MS.gene064663.t1 |
| chr3.4 | CDS | 96962427 | 96962510 | 96962427 | ID=cds.MS.gene064663.t1;Parent=MS.gene064663.t1 |
| chr3.4 | exon | 96962203 | 96962316 | 96962203 | ID=MS.gene064663.t1.exon3;Parent=MS.gene064663.t1 |
| chr3.4 | CDS | 96962203 | 96962316 | 96962203 | ID=cds.MS.gene064663.t1;Parent=MS.gene064663.t1 |
| chr3.4 | exon | 96961738 | 96961824 | 96961738 | ID=MS.gene064663.t1.exon4;Parent=MS.gene064663.t1 |
| chr3.4 | CDS | 96961738 | 96961824 | 96961738 | ID=cds.MS.gene064663.t1;Parent=MS.gene064663.t1 |
| chr3.4 | exon | 96961460 | 96961599 | 96961460 | ID=MS.gene064663.t1.exon5;Parent=MS.gene064663.t1 |
| chr3.4 | CDS | 96961460 | 96961599 | 96961460 | ID=cds.MS.gene064663.t1;Parent=MS.gene064663.t1 |
| chr3.4 | exon | 96961285 | 96961372 | 96961285 | ID=MS.gene064663.t1.exon6;Parent=MS.gene064663.t1 |
| chr3.4 | CDS | 96961285 | 96961372 | 96961285 | ID=cds.MS.gene064663.t1;Parent=MS.gene064663.t1 |
| chr3.4 | exon | 96960478 | 96960551 | 96960478 | ID=MS.gene064663.t1.exon7;Parent=MS.gene064663.t1 |
| chr3.4 | CDS | 96960478 | 96960551 | 96960478 | ID=cds.MS.gene064663.t1;Parent=MS.gene064663.t1 |
| chr3.4 | exon | 96960196 | 96960380 | 96960196 | ID=MS.gene064663.t1.exon8;Parent=MS.gene064663.t1 |
| chr3.4 | CDS | 96960196 | 96960380 | 96960196 | ID=cds.MS.gene064663.t1;Parent=MS.gene064663.t1 |
| chr3.4 | exon | 96959801 | 96960024 | 96959801 | ID=MS.gene064663.t1.exon9;Parent=MS.gene064663.t1 |
| chr3.4 | CDS | 96959801 | 96960024 | 96959801 | ID=cds.MS.gene064663.t1;Parent=MS.gene064663.t1 |
| chr3.4 | exon | 96959486 | 96959532 | 96959486 | ID=MS.gene064663.t1.exon10;Parent=MS.gene064663.t1 |
| chr3.4 | CDS | 96959486 | 96959532 | 96959486 | ID=cds.MS.gene064663.t1;Parent=MS.gene064663.t1 |
| chr3.4 | exon | 96959121 | 96959301 | 96959121 | ID=MS.gene064663.t1.exon11;Parent=MS.gene064663.t1 |
| chr3.4 | CDS | 96959121 | 96959301 | 96959121 | ID=cds.MS.gene064663.t1;Parent=MS.gene064663.t1 |
| Gene Sequence |
| Protein sequence |
