Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064774.t1 | XP_003603778.1 | 96.7 | 270 | 9 | 0 | 7 | 276 | 89 | 358 | 1.30E-147 | 532.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064774.t1 | Q94CH6 | 56.1 | 269 | 116 | 2 | 8 | 275 | 96 | 363 | 9.3e-86 | 318.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064774.t1 | G7J5A1 | 96.7 | 270 | 9 | 0 | 7 | 276 | 89 | 358 | 9.4e-148 | 532.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05157 | MS.gene064774 | 0.800657 | 1.30E-48 | -1.69E-46 |
| MS.gene051719 | MS.gene064774 | 0.800851 | 1.19E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064774.t1 | MTR_3g114090 | 96.667 | 270 | 9 | 0 | 7 | 276 | 89 | 358 | 0.0 | 535 |
| MS.gene064774.t1 | MTR_1g025680 | 71.747 | 269 | 76 | 0 | 7 | 275 | 87 | 355 | 1.51e-145 | 416 |
| MS.gene064774.t1 | MTR_1g025720 | 68.030 | 269 | 86 | 0 | 7 | 275 | 89 | 357 | 7.44e-138 | 393 |
| MS.gene064774.t1 | MTR_1g025700 | 66.543 | 269 | 90 | 0 | 7 | 275 | 102 | 370 | 4.82e-136 | 389 |
| MS.gene064774.t1 | MTR_1g025780 | 67.537 | 268 | 86 | 1 | 8 | 275 | 94 | 360 | 5.19e-136 | 388 |
| MS.gene064774.t1 | MTR_1g025760 | 64.074 | 270 | 96 | 1 | 7 | 275 | 132 | 401 | 3.23e-129 | 372 |
| MS.gene064774.t1 | MTR_3g114120 | 63.941 | 269 | 97 | 0 | 7 | 275 | 99 | 367 | 8.12e-128 | 368 |
| MS.gene064774.t1 | MTR_8g075230 | 52.399 | 271 | 128 | 1 | 7 | 276 | 88 | 358 | 2.38e-100 | 298 |
| MS.gene064774.t1 | MTR_5g022630 | 51.493 | 268 | 129 | 1 | 10 | 276 | 100 | 367 | 4.02e-100 | 297 |
| MS.gene064774.t1 | MTR_8g075200 | 49.630 | 270 | 135 | 1 | 7 | 275 | 93 | 362 | 1.89e-99 | 297 |
| MS.gene064774.t1 | MTR_8g075220 | 48.727 | 275 | 135 | 3 | 7 | 275 | 92 | 366 | 4.51e-96 | 287 |
| MS.gene064774.t1 | MTR_5g022640 | 48.134 | 268 | 138 | 1 | 10 | 276 | 99 | 366 | 6.54e-96 | 286 |
| MS.gene064774.t1 | MTR_6g034400 | 94.309 | 123 | 7 | 0 | 7 | 129 | 3 | 125 | 2.60e-78 | 233 |
| MS.gene064774.t1 | MTR_1g025910 | 40.226 | 266 | 156 | 2 | 7 | 271 | 88 | 351 | 3.41e-71 | 224 |
| MS.gene064774.t1 | MTR_5g084770 | 38.007 | 271 | 164 | 3 | 8 | 275 | 81 | 350 | 1.56e-66 | 211 |
| MS.gene064774.t1 | MTR_5g074270 | 39.179 | 268 | 155 | 3 | 9 | 273 | 87 | 349 | 5.23e-66 | 210 |
| MS.gene064774.t1 | MTR_5g084750 | 38.148 | 270 | 166 | 1 | 7 | 275 | 82 | 351 | 2.18e-65 | 208 |
| MS.gene064774.t1 | MTR_4g087985 | 36.502 | 263 | 159 | 2 | 10 | 264 | 91 | 353 | 4.19e-65 | 207 |
| MS.gene064774.t1 | MTR_3g464730 | 38.007 | 271 | 164 | 4 | 8 | 275 | 81 | 350 | 5.36e-65 | 207 |
| MS.gene064774.t1 | MTR_8g014910 | 39.394 | 264 | 158 | 2 | 7 | 268 | 84 | 347 | 2.28e-64 | 206 |
| MS.gene064774.t1 | MTR_3g082830 | 36.431 | 269 | 170 | 1 | 8 | 275 | 91 | 359 | 2.31e-62 | 201 |
| MS.gene064774.t1 | MTR_4g056280 | 38.168 | 262 | 161 | 1 | 8 | 268 | 83 | 344 | 2.61e-62 | 200 |
| MS.gene064774.t1 | MTR_2g015080 | 36.782 | 261 | 156 | 3 | 13 | 264 | 97 | 357 | 1.29e-61 | 199 |
| MS.gene064774.t1 | MTR_2g100620 | 37.500 | 264 | 163 | 2 | 7 | 268 | 83 | 346 | 7.10e-61 | 196 |
| MS.gene064774.t1 | MTR_2g084585 | 35.688 | 269 | 172 | 1 | 1 | 268 | 76 | 344 | 7.46e-59 | 191 |
| MS.gene064774.t1 | MTR_5g084790 | 36.330 | 267 | 164 | 2 | 7 | 272 | 84 | 345 | 2.28e-57 | 187 |
| MS.gene064774.t1 | MTR_5g083040 | 35.094 | 265 | 164 | 3 | 8 | 265 | 85 | 348 | 4.14e-49 | 166 |
| MS.gene064774.t1 | MTR_4g056160 | 35.156 | 256 | 162 | 3 | 8 | 259 | 80 | 335 | 4.70e-49 | 166 |
| MS.gene064774.t1 | MTR_1108s0010 | 37.264 | 212 | 121 | 2 | 58 | 268 | 3 | 203 | 1.34e-47 | 158 |
| MS.gene064774.t1 | MTR_8g087890 | 30.859 | 256 | 171 | 4 | 7 | 258 | 81 | 334 | 1.38e-40 | 144 |
| MS.gene064774.t1 | MTR_0565s0010 | 30.739 | 257 | 170 | 5 | 7 | 258 | 83 | 336 | 6.19e-40 | 142 |
| MS.gene064774.t1 | MTR_7g116520 | 31.835 | 267 | 171 | 5 | 8 | 268 | 87 | 348 | 5.41e-39 | 140 |
| MS.gene064774.t1 | MTR_4g019880 | 29.710 | 276 | 184 | 6 | 8 | 275 | 85 | 358 | 1.47e-38 | 139 |
| MS.gene064774.t1 | MTR_8g079050 | 30.292 | 274 | 182 | 5 | 8 | 272 | 92 | 365 | 2.12e-38 | 139 |
| MS.gene064774.t1 | MTR_3g435540 | 31.034 | 261 | 169 | 5 | 17 | 271 | 85 | 340 | 2.63e-38 | 138 |
| MS.gene064774.t1 | MTR_2g033920 | 33.077 | 260 | 165 | 5 | 15 | 265 | 92 | 351 | 2.68e-38 | 138 |
| MS.gene064774.t1 | MTR_5g078210 | 31.855 | 248 | 158 | 5 | 17 | 259 | 87 | 328 | 1.60e-37 | 135 |
| MS.gene064774.t1 | MTR_7g008060 | 30.830 | 253 | 170 | 4 | 8 | 257 | 73 | 323 | 1.99e-37 | 135 |
| MS.gene064774.t1 | MTR_3g005660 | 32.234 | 273 | 171 | 8 | 7 | 270 | 83 | 350 | 2.31e-37 | 135 |
| MS.gene064774.t1 | MTR_3g024510 | 29.528 | 254 | 174 | 4 | 7 | 257 | 89 | 340 | 2.72e-37 | 135 |
| MS.gene064774.t1 | MTR_4g108690 | 29.502 | 261 | 173 | 5 | 17 | 271 | 89 | 344 | 4.33e-37 | 135 |
| MS.gene064774.t1 | MTR_3g098270 | 31.373 | 255 | 171 | 3 | 8 | 259 | 89 | 342 | 4.71e-37 | 135 |
| MS.gene064774.t1 | MTR_3g005650 | 31.274 | 259 | 169 | 6 | 4 | 259 | 78 | 330 | 4.95e-37 | 134 |
| MS.gene064774.t1 | MTR_6g021530 | 30.682 | 264 | 178 | 4 | 8 | 268 | 83 | 344 | 6.14e-37 | 134 |
| MS.gene064774.t1 | MTR_7g116510 | 30.798 | 263 | 178 | 3 | 10 | 269 | 80 | 341 | 6.19e-37 | 134 |
| MS.gene064774.t1 | MTR_1g069175 | 32.283 | 254 | 167 | 4 | 8 | 257 | 86 | 338 | 6.75e-37 | 134 |
| MS.gene064774.t1 | MTR_2g033930 | 32.707 | 266 | 167 | 6 | 2 | 259 | 75 | 336 | 9.19e-37 | 134 |
| MS.gene064774.t1 | MTR_4g035353 | 30.081 | 246 | 169 | 2 | 17 | 259 | 91 | 336 | 1.87e-36 | 133 |
| MS.gene064774.t1 | MTR_1g079540 | 30.435 | 253 | 171 | 4 | 8 | 257 | 84 | 334 | 2.49e-36 | 133 |
| MS.gene064774.t1 | MTR_7g116570 | 30.040 | 253 | 172 | 4 | 8 | 257 | 87 | 337 | 3.27e-36 | 132 |
| MS.gene064774.t1 | MTR_5g009100 | 29.555 | 247 | 172 | 2 | 15 | 259 | 105 | 351 | 4.38e-36 | 132 |
| MS.gene064774.t1 | MTR_4g122200 | 33.198 | 247 | 160 | 4 | 17 | 258 | 94 | 340 | 1.11e-35 | 131 |
| MS.gene064774.t1 | MTR_5g074210 | 40.816 | 147 | 81 | 2 | 128 | 273 | 64 | 205 | 2.06e-35 | 127 |
| MS.gene064774.t1 | MTR_7g116500 | 30.830 | 253 | 170 | 4 | 8 | 257 | 86 | 336 | 2.31e-35 | 130 |
| MS.gene064774.t1 | MTR_1g079530 | 30.830 | 253 | 164 | 5 | 8 | 257 | 82 | 326 | 1.97e-34 | 127 |
| MS.gene064774.t1 | MTR_1g024890 | 29.167 | 264 | 182 | 4 | 8 | 268 | 85 | 346 | 9.47e-33 | 123 |
| MS.gene064774.t1 | MTR_8g022790 | 31.950 | 241 | 154 | 4 | 28 | 264 | 108 | 342 | 8.46e-32 | 120 |
| MS.gene064774.t1 | MTR_3g052490 | 32.099 | 243 | 154 | 5 | 29 | 267 | 112 | 347 | 2.79e-30 | 117 |
| MS.gene064774.t1 | MTR_8g074570 | 29.915 | 234 | 155 | 4 | 28 | 257 | 115 | 343 | 4.07e-30 | 116 |
| MS.gene064774.t1 | MTR_2g044100 | 29.344 | 259 | 173 | 4 | 15 | 267 | 104 | 358 | 1.03e-29 | 115 |
| MS.gene064774.t1 | MTR_8g031400 | 29.520 | 271 | 168 | 9 | 12 | 268 | 85 | 346 | 2.11e-28 | 112 |
| MS.gene064774.t1 | MTR_3g052480 | 31.933 | 238 | 146 | 7 | 29 | 259 | 113 | 341 | 3.18e-28 | 111 |
| MS.gene064774.t1 | MTR_6g049230 | 42.742 | 124 | 70 | 1 | 127 | 249 | 71 | 194 | 5.41e-28 | 106 |
| MS.gene064774.t1 | MTR_8g022810 | 27.170 | 265 | 178 | 5 | 12 | 263 | 89 | 351 | 1.15e-27 | 110 |
| MS.gene064774.t1 | MTR_8g031430 | 28.626 | 262 | 163 | 9 | 12 | 258 | 85 | 337 | 2.18e-26 | 106 |
| MS.gene064774.t1 | MTR_8g031420 | 28.340 | 247 | 162 | 7 | 19 | 259 | 99 | 336 | 3.82e-26 | 105 |
| MS.gene064774.t1 | MTR_3g052580 | 29.741 | 232 | 158 | 3 | 29 | 259 | 107 | 334 | 2.50e-25 | 103 |
| MS.gene064774.t1 | MTR_3g052580 | 29.167 | 240 | 165 | 3 | 29 | 267 | 106 | 341 | 3.19e-25 | 103 |
| MS.gene064774.t1 | MTR_5g078210 | 29.258 | 229 | 151 | 5 | 17 | 239 | 87 | 310 | 1.51e-24 | 100 |
| MS.gene064774.t1 | MTR_8g031390 | 28.279 | 244 | 160 | 7 | 22 | 259 | 103 | 337 | 1.57e-24 | 101 |
| MS.gene064774.t1 | MTR_5g093090 | 28.077 | 260 | 173 | 6 | 8 | 259 | 82 | 335 | 2.30e-24 | 100 |
| MS.gene064774.t1 | MTR_4g056220 | 40.517 | 116 | 68 | 1 | 154 | 268 | 66 | 181 | 3.99e-24 | 96.7 |
| MS.gene064774.t1 | MTR_2g033920 | 33.816 | 207 | 127 | 5 | 15 | 214 | 92 | 295 | 6.04e-24 | 99.0 |
| MS.gene064774.t1 | MTR_8g087870 | 27.344 | 256 | 171 | 6 | 7 | 259 | 80 | 323 | 1.08e-23 | 99.0 |
| MS.gene064774.t1 | MTR_8g074560 | 28.996 | 269 | 168 | 9 | 3 | 257 | 80 | 339 | 5.17e-23 | 97.1 |
| MS.gene064774.t1 | MTR_0127s0040 | 29.864 | 221 | 149 | 4 | 53 | 269 | 4 | 222 | 6.96e-23 | 94.4 |
| MS.gene064774.t1 | MTR_3g023220 | 26.172 | 256 | 170 | 8 | 8 | 259 | 85 | 325 | 8.17e-23 | 96.3 |
| MS.gene064774.t1 | MTR_4g036385 | 37.500 | 120 | 74 | 1 | 154 | 272 | 13 | 132 | 1.20e-22 | 91.3 |
| MS.gene064774.t1 | MTR_2g017875 | 26.277 | 274 | 178 | 8 | 8 | 268 | 87 | 349 | 1.81e-22 | 95.5 |
| MS.gene064774.t1 | MTR_1g030275 | 28.070 | 285 | 166 | 10 | 13 | 264 | 88 | 366 | 3.76e-22 | 95.1 |
| MS.gene064774.t1 | MTR_1g030268 | 28.148 | 270 | 159 | 9 | 19 | 259 | 95 | 358 | 5.03e-21 | 92.0 |
| MS.gene064774.t1 | MTR_8g031390 | 29.126 | 206 | 136 | 5 | 22 | 226 | 103 | 299 | 7.74e-21 | 90.5 |
| MS.gene064774.t1 | MTR_2g017965 | 29.688 | 256 | 167 | 8 | 7 | 258 | 85 | 331 | 1.04e-20 | 90.9 |
| MS.gene064774.t1 | MTR_1g030265 | 27.574 | 272 | 160 | 9 | 19 | 259 | 60 | 325 | 3.64e-20 | 89.0 |
| MS.gene064774.t1 | MTR_0009s0250 | 29.555 | 247 | 157 | 9 | 15 | 257 | 92 | 325 | 1.13e-19 | 87.8 |
| MS.gene064774.t1 | MTR_7g113860 | 25.090 | 279 | 177 | 8 | 7 | 259 | 10 | 282 | 2.10e-19 | 86.3 |
| MS.gene064774.t1 | MTR_5g087690 | 24.621 | 264 | 189 | 5 | 7 | 263 | 93 | 353 | 2.36e-19 | 87.0 |
| MS.gene064774.t1 | MTR_7g111780 | 27.138 | 269 | 172 | 9 | 14 | 268 | 91 | 349 | 7.19e-19 | 85.5 |
| MS.gene064774.t1 | MTR_6g007100 | 24.373 | 279 | 179 | 8 | 15 | 276 | 87 | 350 | 7.97e-19 | 85.5 |
| MS.gene064774.t1 | MTR_7g113860 | 24.723 | 271 | 173 | 7 | 15 | 259 | 85 | 350 | 8.64e-19 | 85.5 |
| MS.gene064774.t1 | MTR_7g113860 | 24.723 | 271 | 173 | 7 | 15 | 259 | 91 | 356 | 1.16e-18 | 85.1 |
| MS.gene064774.t1 | MTR_2g017955 | 26.744 | 258 | 172 | 9 | 7 | 258 | 84 | 330 | 2.18e-18 | 84.3 |
| MS.gene064774.t1 | MTR_2g043980 | 28.723 | 282 | 163 | 10 | 7 | 269 | 83 | 345 | 3.49e-18 | 83.6 |
| MS.gene064774.t1 | MTR_7g111780 | 26.562 | 256 | 165 | 8 | 27 | 268 | 4 | 250 | 7.15e-18 | 81.3 |
| MS.gene064774.t1 | MTR_3g021460 | 26.506 | 249 | 162 | 7 | 17 | 259 | 91 | 324 | 1.64e-17 | 81.6 |
| MS.gene064774.t1 | MTR_8g074580 | 28.400 | 250 | 133 | 10 | 3 | 228 | 92 | 319 | 7.14e-17 | 80.1 |
| MS.gene064774.t1 | MTR_2g461580 | 24.291 | 247 | 170 | 6 | 17 | 259 | 91 | 324 | 9.55e-17 | 79.3 |
| MS.gene064774.t1 | MTR_8g089805 | 23.427 | 286 | 185 | 8 | 15 | 271 | 27 | 307 | 1.24e-16 | 79.0 |
| MS.gene064774.t1 | MTR_1g082390 | 24.911 | 281 | 181 | 7 | 15 | 270 | 87 | 362 | 1.31e-16 | 79.3 |
| MS.gene064774.t1 | MTR_8g089805 | 23.264 | 288 | 183 | 9 | 15 | 271 | 95 | 375 | 1.88e-16 | 79.0 |
| MS.gene064774.t1 | MTR_7g033165 | 24.735 | 283 | 175 | 8 | 15 | 265 | 88 | 364 | 1.93e-16 | 78.6 |
| MS.gene064774.t1 | MTR_8g022810 | 24.151 | 265 | 133 | 7 | 12 | 263 | 89 | 298 | 2.05e-16 | 78.2 |
| MS.gene064774.t1 | MTR_5g084880 | 32.727 | 110 | 74 | 0 | 105 | 214 | 3 | 112 | 2.35e-16 | 74.3 |
| MS.gene064774.t1 | MTR_1g030230 | 25.090 | 279 | 162 | 11 | 15 | 259 | 87 | 352 | 2.60e-16 | 78.2 |
| MS.gene064774.t1 | MTR_2g015580 | 26.728 | 217 | 143 | 7 | 54 | 260 | 155 | 365 | 2.63e-16 | 78.6 |
| MS.gene064774.t1 | MTR_2g015630 | 26.316 | 228 | 149 | 8 | 54 | 269 | 140 | 360 | 3.37e-16 | 78.2 |
| MS.gene064774.t1 | MTR_2g017925 | 25.581 | 258 | 171 | 9 | 7 | 258 | 84 | 326 | 9.31e-16 | 76.6 |
| MS.gene064774.t1 | MTR_3g069780 | 29.167 | 288 | 166 | 14 | 7 | 269 | 81 | 355 | 1.46e-15 | 76.3 |
| MS.gene064774.t1 | MTR_1g030340 | 26.455 | 189 | 109 | 6 | 92 | 259 | 184 | 363 | 1.55e-15 | 76.3 |
| MS.gene064774.t1 | MTR_7g116870 | 25.941 | 239 | 145 | 8 | 51 | 265 | 126 | 356 | 1.69e-15 | 75.9 |
| MS.gene064774.t1 | MTR_7g087190 | 24.296 | 284 | 177 | 10 | 7 | 259 | 91 | 367 | 1.70e-15 | 76.3 |
| MS.gene064774.t1 | MTR_1g030268 | 29.767 | 215 | 126 | 7 | 19 | 214 | 95 | 303 | 3.23e-15 | 74.7 |
| MS.gene064774.t1 | MTR_3g438030 | 28.819 | 288 | 167 | 14 | 7 | 269 | 81 | 355 | 3.62e-15 | 75.1 |
| MS.gene064774.t1 | MTR_8g028160 | 27.465 | 284 | 166 | 13 | 7 | 259 | 84 | 358 | 4.39e-15 | 74.7 |
| MS.gene064774.t1 | MTR_3g463930 | 25.510 | 294 | 179 | 11 | 7 | 269 | 95 | 379 | 6.00e-15 | 74.3 |
| MS.gene064774.t1 | MTR_2g015590 | 27.193 | 228 | 149 | 6 | 54 | 269 | 137 | 359 | 5.16e-14 | 71.6 |
| MS.gene064774.t1 | MTR_2g017915 | 25.869 | 259 | 156 | 9 | 7 | 260 | 84 | 311 | 1.43e-13 | 70.1 |
| MS.gene064774.t1 | MTR_6g007095 | 25.086 | 291 | 172 | 12 | 15 | 276 | 96 | 369 | 1.47e-13 | 70.9 |
| MS.gene064774.t1 | MTR_6g007095 | 24.275 | 276 | 180 | 8 | 15 | 276 | 425 | 685 | 3.23e-13 | 69.7 |
| MS.gene064774.t1 | MTR_3g463960 | 25.436 | 287 | 181 | 11 | 7 | 269 | 95 | 372 | 1.51e-13 | 70.5 |
| MS.gene064774.t1 | MTR_3g463950 | 25.436 | 287 | 181 | 11 | 7 | 269 | 95 | 372 | 1.51e-13 | 70.5 |
| MS.gene064774.t1 | MTR_3g463970 | 25.436 | 287 | 181 | 11 | 7 | 269 | 95 | 372 | 1.51e-13 | 70.5 |
| MS.gene064774.t1 | MTR_3g463940 | 25.436 | 287 | 181 | 11 | 7 | 269 | 95 | 372 | 1.51e-13 | 70.5 |
| MS.gene064774.t1 | MTR_1g030220 | 26.984 | 189 | 117 | 6 | 92 | 264 | 181 | 364 | 2.48e-13 | 69.7 |
| MS.gene064774.t1 | MTR_1g092690 | 27.386 | 241 | 147 | 11 | 32 | 260 | 120 | 344 | 3.97e-13 | 68.9 |
| MS.gene064774.t1 | MTR_0029s0050 | 26.103 | 272 | 166 | 10 | 7 | 260 | 80 | 334 | 6.11e-13 | 68.6 |
| MS.gene064774.t1 | MTR_7g033150 | 25.121 | 207 | 131 | 4 | 82 | 268 | 167 | 369 | 6.67e-13 | 68.6 |
| MS.gene064774.t1 | MTR_8g038680 | 22.581 | 279 | 187 | 5 | 15 | 268 | 83 | 357 | 7.54e-13 | 68.2 |
| MS.gene064774.t1 | MTR_0029s0100 | 26.103 | 272 | 166 | 10 | 7 | 260 | 80 | 334 | 1.10e-12 | 67.8 |
| MS.gene064774.t1 | MTR_1g060520 | 24.118 | 170 | 118 | 5 | 113 | 274 | 154 | 320 | 1.72e-12 | 67.0 |
| MS.gene064774.t1 | MTR_4g104240 | 26.875 | 160 | 109 | 3 | 118 | 269 | 202 | 361 | 5.95e-12 | 65.5 |
| MS.gene064774.t1 | MTR_3g011860 | 32.558 | 86 | 58 | 0 | 160 | 245 | 238 | 323 | 2.56e-11 | 63.5 |
| MS.gene064774.t1 | MTR_5g093550 | 42.857 | 63 | 31 | 1 | 210 | 272 | 75 | 132 | 2.83e-11 | 60.8 |
| MS.gene064774.t1 | MTR_1g092760 | 27.203 | 261 | 162 | 11 | 27 | 275 | 103 | 347 | 3.32e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064774.t1 | AT1G75900 | 56.134 | 269 | 116 | 2 | 8 | 275 | 96 | 363 | 1.97e-107 | 316 |
| MS.gene064774.t1 | AT1G75880 | 53.333 | 270 | 125 | 1 | 8 | 276 | 105 | 374 | 2.27e-100 | 298 |
| MS.gene064774.t1 | AT1G75890 | 51.894 | 264 | 126 | 1 | 10 | 272 | 103 | 366 | 4.43e-99 | 295 |
| MS.gene064774.t1 | AT1G75890 | 51.894 | 264 | 126 | 1 | 10 | 272 | 132 | 395 | 6.08e-99 | 295 |
| MS.gene064774.t1 | AT1G75880 | 53.137 | 271 | 125 | 2 | 8 | 276 | 105 | 375 | 1.39e-98 | 294 |
| MS.gene064774.t1 | AT1G75890 | 49.458 | 277 | 126 | 2 | 10 | 272 | 103 | 379 | 1.25e-95 | 286 |
| MS.gene064774.t1 | AT3G14820 | 51.128 | 266 | 125 | 3 | 7 | 271 | 84 | 345 | 8.77e-93 | 278 |
| MS.gene064774.t1 | AT5G42170 | 49.071 | 269 | 133 | 2 | 8 | 275 | 103 | 368 | 9.22e-91 | 273 |
| MS.gene064774.t1 | AT1G20120 | 45.522 | 268 | 145 | 1 | 10 | 276 | 133 | 400 | 1.34e-89 | 271 |
| MS.gene064774.t1 | AT1G20132 | 46.067 | 267 | 143 | 1 | 8 | 273 | 114 | 380 | 3.23e-84 | 257 |
| MS.gene064774.t1 | AT1G59406 | 45.221 | 272 | 143 | 4 | 7 | 276 | 82 | 349 | 2.92e-81 | 249 |
| MS.gene064774.t1 | AT1G59030 | 45.221 | 272 | 143 | 4 | 7 | 276 | 82 | 349 | 2.92e-81 | 249 |
| MS.gene064774.t1 | AT1G58725 | 45.221 | 272 | 143 | 4 | 7 | 276 | 82 | 349 | 2.92e-81 | 249 |
| MS.gene064774.t1 | AT1G58520 | 43.750 | 272 | 140 | 5 | 7 | 276 | 82 | 342 | 6.00e-74 | 229 |
| MS.gene064774.t1 | AT1G58525 | 43.750 | 272 | 140 | 5 | 7 | 276 | 82 | 342 | 6.00e-74 | 229 |
| MS.gene064774.t1 | AT2G31540 | 41.887 | 265 | 149 | 3 | 10 | 269 | 91 | 355 | 2.57e-72 | 226 |
| MS.gene064774.t1 | AT2G30220 | 41.985 | 262 | 142 | 3 | 10 | 265 | 89 | 346 | 2.72e-70 | 221 |
| MS.gene064774.t1 | AT1G20130 | 41.091 | 275 | 148 | 3 | 10 | 273 | 239 | 510 | 3.41e-70 | 225 |
| MS.gene064774.t1 | AT1G20130 | 41.091 | 275 | 148 | 3 | 10 | 273 | 259 | 530 | 1.09e-69 | 224 |
| MS.gene064774.t1 | AT5G63170 | 42.913 | 254 | 132 | 3 | 8 | 260 | 81 | 322 | 1.46e-69 | 218 |
| MS.gene064774.t1 | AT3G43570 | 40.741 | 270 | 127 | 4 | 8 | 276 | 83 | 320 | 1.69e-68 | 215 |
| MS.gene064774.t1 | AT1G58430 | 40.304 | 263 | 155 | 2 | 10 | 270 | 91 | 353 | 1.94e-68 | 216 |
| MS.gene064774.t1 | AT2G30310 | 41.085 | 258 | 150 | 2 | 10 | 265 | 90 | 347 | 3.61e-68 | 215 |
| MS.gene064774.t1 | AT2G40250 | 39.114 | 271 | 156 | 3 | 7 | 270 | 88 | 356 | 4.81e-67 | 213 |
| MS.gene064774.t1 | AT1G73610 | 39.922 | 258 | 141 | 3 | 7 | 263 | 87 | 331 | 4.97e-67 | 212 |
| MS.gene064774.t1 | AT5G03810 | 39.552 | 268 | 160 | 2 | 7 | 272 | 82 | 349 | 5.33e-67 | 212 |
| MS.gene064774.t1 | AT1G06990 | 37.218 | 266 | 165 | 1 | 10 | 273 | 92 | 357 | 1.65e-66 | 211 |
| MS.gene064774.t1 | AT2G04570 | 38.290 | 269 | 165 | 1 | 8 | 275 | 81 | 349 | 1.88e-65 | 208 |
| MS.gene064774.t1 | AT2G24560 | 38.372 | 258 | 157 | 2 | 10 | 265 | 90 | 347 | 7.80e-65 | 207 |
| MS.gene064774.t1 | AT1G23500 | 43.701 | 254 | 130 | 3 | 8 | 260 | 88 | 329 | 9.90e-65 | 206 |
| MS.gene064774.t1 | AT4G26790 | 36.431 | 269 | 170 | 1 | 8 | 275 | 82 | 350 | 7.70e-64 | 204 |
| MS.gene064774.t1 | AT4G26790 | 36.431 | 269 | 170 | 1 | 8 | 275 | 82 | 350 | 7.70e-64 | 204 |
| MS.gene064774.t1 | AT5G03820 | 37.918 | 269 | 164 | 2 | 7 | 272 | 85 | 353 | 1.69e-61 | 198 |
| MS.gene064774.t1 | AT5G03820 | 37.918 | 269 | 164 | 2 | 7 | 272 | 113 | 381 | 4.92e-61 | 198 |
| MS.gene064774.t1 | AT5G45960 | 36.122 | 263 | 163 | 2 | 10 | 267 | 102 | 364 | 4.94e-60 | 195 |
| MS.gene064774.t1 | AT2G42990 | 35.926 | 270 | 171 | 2 | 8 | 276 | 81 | 349 | 1.80e-59 | 193 |
| MS.gene064774.t1 | AT3G16370 | 37.121 | 264 | 164 | 2 | 7 | 268 | 82 | 345 | 3.40e-59 | 192 |
| MS.gene064774.t1 | AT3G43550 | 47.115 | 208 | 105 | 3 | 8 | 214 | 83 | 286 | 3.73e-59 | 190 |
| MS.gene064774.t1 | AT5G22810 | 37.218 | 266 | 163 | 2 | 7 | 268 | 86 | 351 | 1.61e-58 | 191 |
| MS.gene064774.t1 | AT1G20135 | 36.434 | 258 | 151 | 3 | 8 | 264 | 82 | 327 | 5.60e-57 | 186 |
| MS.gene064774.t1 | AT3G53100 | 34.328 | 268 | 175 | 1 | 6 | 272 | 80 | 347 | 1.48e-56 | 185 |
| MS.gene064774.t1 | AT1G75910 | 39.098 | 266 | 150 | 4 | 7 | 269 | 80 | 336 | 1.11e-55 | 183 |
| MS.gene064774.t1 | AT1G75920 | 39.850 | 266 | 145 | 5 | 7 | 268 | 53 | 307 | 2.13e-55 | 181 |
| MS.gene064774.t1 | AT1G75920 | 40.000 | 265 | 144 | 5 | 8 | 268 | 82 | 335 | 3.73e-55 | 181 |
| MS.gene064774.t1 | AT1G75920 | 40.000 | 265 | 144 | 5 | 8 | 268 | 92 | 345 | 6.79e-55 | 181 |
| MS.gene064774.t1 | AT2G31550 | 38.785 | 214 | 126 | 3 | 61 | 269 | 1 | 214 | 3.05e-51 | 167 |
| MS.gene064774.t1 | AT5G45950 | 31.970 | 269 | 178 | 4 | 8 | 276 | 93 | 356 | 1.56e-48 | 164 |
| MS.gene064774.t1 | AT1G75930 | 38.202 | 267 | 146 | 8 | 8 | 268 | 82 | 335 | 2.43e-45 | 156 |
| MS.gene064774.t1 | AT2G24560 | 37.681 | 207 | 127 | 2 | 10 | 214 | 90 | 296 | 4.71e-44 | 152 |
| MS.gene064774.t1 | AT1G75920 | 35.686 | 255 | 147 | 6 | 20 | 268 | 61 | 304 | 2.74e-42 | 147 |
| MS.gene064774.t1 | AT5G41890 | 35.361 | 263 | 159 | 5 | 8 | 259 | 86 | 348 | 3.50e-41 | 146 |
| MS.gene064774.t1 | AT1G33811 | 31.559 | 263 | 167 | 7 | 7 | 259 | 85 | 344 | 1.44e-39 | 141 |
| MS.gene064774.t1 | AT5G45670 | 30.739 | 257 | 172 | 4 | 7 | 259 | 80 | 334 | 2.34e-39 | 140 |
| MS.gene064774.t1 | AT5G37690 | 30.350 | 257 | 168 | 5 | 17 | 268 | 81 | 331 | 4.43e-39 | 140 |
| MS.gene064774.t1 | AT5G37690 | 30.350 | 257 | 168 | 5 | 17 | 268 | 89 | 339 | 7.02e-39 | 139 |
| MS.gene064774.t1 | AT3G50400 | 30.224 | 268 | 180 | 5 | 8 | 268 | 89 | 356 | 7.73e-39 | 140 |
| MS.gene064774.t1 | AT4G28780 | 30.556 | 252 | 172 | 3 | 8 | 257 | 84 | 334 | 8.76e-39 | 139 |
| MS.gene064774.t1 | AT2G23540 | 30.620 | 258 | 173 | 4 | 8 | 259 | 103 | 360 | 1.67e-38 | 139 |
| MS.gene064774.t1 | AT1G29670 | 30.620 | 258 | 170 | 6 | 7 | 259 | 82 | 335 | 2.22e-38 | 138 |
| MS.gene064774.t1 | AT1G29670 | 30.620 | 258 | 170 | 6 | 7 | 259 | 150 | 403 | 7.05e-38 | 138 |
| MS.gene064774.t1 | AT1G71691 | 31.873 | 251 | 158 | 6 | 15 | 259 | 12 | 255 | 6.93e-37 | 132 |
| MS.gene064774.t1 | AT5G33370 | 30.182 | 275 | 178 | 6 | 8 | 273 | 83 | 352 | 8.10e-37 | 134 |
| MS.gene064774.t1 | AT4G10950 | 29.231 | 260 | 179 | 4 | 7 | 263 | 119 | 376 | 1.39e-36 | 134 |
| MS.gene064774.t1 | AT4G10950 | 28.958 | 259 | 179 | 4 | 8 | 263 | 124 | 380 | 4.33e-36 | 133 |
| MS.gene064774.t1 | AT3G04290 | 29.779 | 272 | 183 | 5 | 8 | 273 | 82 | 351 | 5.04e-36 | 132 |
| MS.gene064774.t1 | AT5G08460 | 30.350 | 257 | 172 | 4 | 8 | 258 | 102 | 357 | 7.81e-36 | 132 |
| MS.gene064774.t1 | AT1G71691 | 31.873 | 251 | 158 | 6 | 15 | 259 | 113 | 356 | 1.01e-35 | 132 |
| MS.gene064774.t1 | AT1G71250 | 29.600 | 250 | 173 | 2 | 17 | 263 | 101 | 350 | 1.66e-35 | 131 |
| MS.gene064774.t1 | AT4G18970 | 28.794 | 257 | 177 | 4 | 7 | 259 | 79 | 333 | 2.46e-35 | 130 |
| MS.gene064774.t1 | AT1G29660 | 29.119 | 261 | 179 | 4 | 7 | 263 | 82 | 340 | 4.97e-35 | 129 |
| MS.gene064774.t1 | AT4G18970 | 28.794 | 257 | 177 | 4 | 7 | 259 | 79 | 333 | 5.37e-35 | 130 |
| MS.gene064774.t1 | AT5G55050 | 34.783 | 253 | 153 | 7 | 27 | 273 | 117 | 363 | 5.46e-34 | 127 |
| MS.gene064774.t1 | AT1G74460 | 28.205 | 273 | 182 | 6 | 8 | 271 | 73 | 340 | 1.06e-33 | 126 |
| MS.gene064774.t1 | AT5G15720 | 31.076 | 251 | 167 | 5 | 15 | 259 | 56 | 306 | 1.09e-33 | 125 |
| MS.gene064774.t1 | AT5G15720 | 31.076 | 251 | 167 | 5 | 15 | 259 | 87 | 337 | 2.38e-33 | 125 |
| MS.gene064774.t1 | AT5G18430 | 26.894 | 264 | 190 | 2 | 8 | 268 | 81 | 344 | 1.60e-32 | 122 |
| MS.gene064774.t1 | AT1G53920 | 26.667 | 255 | 178 | 4 | 16 | 265 | 109 | 359 | 5.98e-29 | 113 |
| MS.gene064774.t1 | AT5G40990 | 27.969 | 261 | 172 | 4 | 12 | 257 | 85 | 344 | 1.18e-26 | 107 |
| MS.gene064774.t1 | AT2G19050 | 28.958 | 259 | 162 | 9 | 7 | 259 | 82 | 324 | 1.23e-26 | 107 |
| MS.gene064774.t1 | AT3G14225 | 27.165 | 254 | 174 | 3 | 20 | 263 | 98 | 350 | 2.64e-26 | 106 |
| MS.gene064774.t1 | AT1G53940 | 28.030 | 264 | 163 | 6 | 16 | 263 | 100 | 352 | 3.20e-26 | 106 |
| MS.gene064774.t1 | AT2G19010 | 29.845 | 258 | 159 | 9 | 8 | 259 | 82 | 323 | 3.82e-26 | 105 |
| MS.gene064774.t1 | AT2G19010 | 29.845 | 258 | 159 | 9 | 8 | 259 | 112 | 353 | 4.27e-26 | 105 |
| MS.gene064774.t1 | AT3G14225 | 27.237 | 257 | 174 | 3 | 20 | 263 | 98 | 354 | 4.30e-26 | 105 |
| MS.gene064774.t1 | AT1G53990 | 28.782 | 271 | 161 | 8 | 13 | 263 | 83 | 341 | 5.02e-26 | 105 |
| MS.gene064774.t1 | AT2G19060 | 28.846 | 260 | 163 | 8 | 7 | 259 | 81 | 325 | 5.11e-26 | 105 |
| MS.gene064774.t1 | AT5G33370 | 28.740 | 254 | 164 | 6 | 8 | 255 | 83 | 325 | 4.74e-25 | 102 |
| MS.gene064774.t1 | AT1G71120 | 29.362 | 235 | 157 | 5 | 27 | 260 | 106 | 332 | 3.29e-24 | 100 |
| MS.gene064774.t1 | AT4G16230 | 34.940 | 166 | 104 | 2 | 8 | 169 | 81 | 246 | 1.56e-23 | 96.7 |
| MS.gene064774.t1 | AT4G30140 | 27.530 | 247 | 165 | 6 | 32 | 276 | 107 | 341 | 2.07e-21 | 92.4 |
| MS.gene064774.t1 | AT3G05180 | 24.632 | 272 | 175 | 6 | 13 | 259 | 91 | 357 | 5.87e-20 | 89.0 |
| MS.gene064774.t1 | AT2G03980 | 27.953 | 254 | 161 | 9 | 15 | 257 | 102 | 344 | 2.06e-19 | 87.0 |
| MS.gene064774.t1 | AT2G03980 | 27.953 | 254 | 161 | 9 | 15 | 257 | 102 | 344 | 2.06e-19 | 87.0 |
| MS.gene064774.t1 | AT2G03980 | 27.953 | 254 | 161 | 9 | 15 | 257 | 102 | 344 | 2.06e-19 | 87.0 |
| MS.gene064774.t1 | AT2G03980 | 27.953 | 254 | 161 | 9 | 15 | 257 | 102 | 344 | 2.06e-19 | 87.0 |
| MS.gene064774.t1 | AT1G54790 | 24.354 | 271 | 174 | 7 | 15 | 259 | 87 | 352 | 3.36e-19 | 86.7 |
| MS.gene064774.t1 | AT1G54790 | 24.354 | 271 | 174 | 7 | 15 | 259 | 88 | 353 | 4.96e-19 | 86.3 |
| MS.gene064774.t1 | AT1G71691 | 29.126 | 206 | 133 | 6 | 15 | 214 | 113 | 311 | 1.82e-18 | 84.0 |
| MS.gene064774.t1 | AT4G01130 | 27.839 | 273 | 160 | 9 | 19 | 259 | 3 | 270 | 1.92e-18 | 83.6 |
| MS.gene064774.t1 | AT1G54000 | 26.587 | 252 | 160 | 7 | 16 | 257 | 92 | 328 | 1.94e-18 | 84.7 |
| MS.gene064774.t1 | AT5G15720 | 29.126 | 206 | 140 | 5 | 15 | 214 | 87 | 292 | 2.05e-18 | 83.6 |
| MS.gene064774.t1 | AT2G19050 | 28.283 | 198 | 130 | 6 | 7 | 201 | 82 | 270 | 4.56e-18 | 82.4 |
| MS.gene064774.t1 | AT4G01130 | 27.839 | 273 | 160 | 9 | 19 | 259 | 89 | 356 | 4.83e-18 | 83.6 |
| MS.gene064774.t1 | AT1G54020 | 27.451 | 255 | 157 | 9 | 10 | 257 | 1 | 234 | 4.94e-17 | 79.3 |
| MS.gene064774.t1 | AT1G54020 | 27.451 | 255 | 157 | 9 | 10 | 257 | 1 | 234 | 4.94e-17 | 79.3 |
| MS.gene064774.t1 | AT1G54020 | 27.451 | 255 | 157 | 9 | 10 | 257 | 1 | 234 | 4.94e-17 | 79.3 |
| MS.gene064774.t1 | AT1G09390 | 27.957 | 186 | 119 | 6 | 84 | 259 | 164 | 344 | 6.89e-17 | 80.1 |
| MS.gene064774.t1 | AT5G03610 | 28.777 | 278 | 168 | 11 | 10 | 272 | 95 | 357 | 9.99e-17 | 79.3 |
| MS.gene064774.t1 | AT1G54020 | 27.451 | 255 | 157 | 9 | 10 | 257 | 87 | 320 | 1.37e-16 | 79.3 |
| MS.gene064774.t1 | AT1G54010 | 26.087 | 253 | 160 | 8 | 16 | 257 | 92 | 328 | 1.68e-16 | 79.0 |
| MS.gene064774.t1 | AT1G28610 | 26.496 | 234 | 149 | 8 | 51 | 269 | 133 | 358 | 2.02e-16 | 78.6 |
| MS.gene064774.t1 | AT4G16233 | 37.000 | 100 | 62 | 1 | 160 | 258 | 3 | 102 | 3.37e-16 | 73.9 |
| MS.gene064774.t1 | AT3G09930 | 29.286 | 280 | 165 | 11 | 10 | 272 | 91 | 354 | 7.92e-16 | 76.6 |
| MS.gene064774.t1 | AT3G09930 | 29.286 | 280 | 165 | 11 | 10 | 272 | 91 | 354 | 7.92e-16 | 76.6 |
| MS.gene064774.t1 | AT1G53940 | 26.887 | 212 | 134 | 5 | 16 | 217 | 100 | 300 | 3.84e-15 | 74.3 |
| MS.gene064774.t1 | AT3G26430 | 24.306 | 288 | 181 | 10 | 7 | 264 | 79 | 359 | 4.61e-15 | 74.7 |
| MS.gene064774.t1 | AT2G27360 | 26.812 | 276 | 171 | 9 | 7 | 260 | 87 | 353 | 8.55e-15 | 73.9 |
| MS.gene064774.t1 | AT1G56670 | 24.528 | 265 | 169 | 10 | 14 | 259 | 95 | 347 | 5.31e-14 | 71.6 |
| MS.gene064774.t1 | AT5G03980 | 27.311 | 238 | 135 | 9 | 50 | 265 | 90 | 311 | 7.47e-14 | 70.9 |
| MS.gene064774.t1 | AT1G54030 | 22.619 | 252 | 168 | 9 | 12 | 254 | 98 | 331 | 1.37e-13 | 70.5 |
| MS.gene064774.t1 | AT1G28590 | 25.887 | 282 | 179 | 11 | 12 | 269 | 89 | 364 | 2.18e-13 | 70.1 |
| MS.gene064774.t1 | AT5G14450 | 23.810 | 294 | 185 | 8 | 7 | 268 | 89 | 375 | 2.38e-13 | 69.7 |
| MS.gene064774.t1 | AT1G54020 | 31.034 | 145 | 91 | 4 | 120 | 257 | 43 | 185 | 2.91e-13 | 68.2 |
| MS.gene064774.t1 | AT1G28650 | 27.826 | 230 | 146 | 10 | 53 | 268 | 141 | 364 | 5.42e-13 | 68.6 |
| MS.gene064774.t1 | AT1G31550 | 24.348 | 230 | 156 | 8 | 53 | 269 | 139 | 363 | 3.89e-12 | 66.2 |
| MS.gene064774.t1 | AT3G14220 | 24.906 | 265 | 172 | 9 | 10 | 265 | 86 | 332 | 7.96e-12 | 65.1 |
| MS.gene064774.t1 | AT3G48460 | 24.444 | 225 | 148 | 7 | 54 | 268 | 149 | 361 | 1.18e-11 | 64.7 |
| MS.gene064774.t1 | AT5G45910 | 29.046 | 241 | 141 | 11 | 45 | 268 | 135 | 362 | 1.67e-11 | 64.3 |
| MS.gene064774.t1 | AT1G67830 | 22.615 | 283 | 182 | 9 | 7 | 259 | 78 | 353 | 2.16e-11 | 63.9 |
| MS.gene064774.t1 | AT2G04020 | 32.877 | 146 | 76 | 6 | 15 | 150 | 102 | 235 | 2.56e-11 | 62.8 |
| MS.gene064774.t1 | AT4G01130 | 26.423 | 246 | 153 | 9 | 19 | 241 | 89 | 329 | 2.70e-11 | 63.5 |
| MS.gene064774.t1 | AT1G28580 | 24.028 | 283 | 185 | 10 | 7 | 268 | 10 | 283 | 3.00e-11 | 63.2 |
| MS.gene064774.t1 | AT1G28580 | 24.028 | 283 | 185 | 10 | 7 | 268 | 91 | 364 | 4.39e-11 | 63.2 |
| MS.gene064774.t1 | AT2G04020 | 32.877 | 146 | 76 | 6 | 15 | 150 | 102 | 235 | 6.40e-11 | 62.4 |
| MS.gene064774.t1 | AT1G28570 | 24.739 | 287 | 176 | 11 | 12 | 269 | 87 | 362 | 8.45e-11 | 62.4 |
Find 73 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGCTTCCAATTTCTTAA+AGG | 0.119113 | 3.4:+98029566 | MS.gene064774:CDS |
| GGAATTTCTGCCGGCGTATT+TGG | 0.151357 | 3.4:+98029146 | MS.gene064774:CDS |
| GGTTATACATACCATAATTT+TGG | 0.186894 | 3.4:-98030686 | None:intergenic |
| GGAGTATACCTTTAAGAAAT+TGG | 0.202417 | 3.4:-98029574 | None:intergenic |
| TGCTTTGCATCCGGTGGTTC+CGG | 0.214847 | 3.4:+98029207 | MS.gene064774:CDS |
| AGATCGCTAGGTTGGATATT+TGG | 0.224125 | 3.4:-98029171 | None:intergenic |
| CAAAATACGTACCGCAGTTT+TGG | 0.248518 | 3.4:-98029247 | None:intergenic |
| CTTCACATTGGATAGCAAAT+TGG | 0.263085 | 3.4:-98032017 | None:intergenic |
| CTATCCAATGTGAAGATGTT+AGG | 0.281153 | 3.4:+98032025 | MS.gene064774:CDS |
| AGAACGGTTGTTGGAGGAAT+TGG | 0.284213 | 3.4:+98030513 | MS.gene064774:CDS |
| ATCCTAAATTACCAAAATTA+TGG | 0.287607 | 3.4:+98030675 | MS.gene064774:CDS |
| AGTTGAAGCATTGGGAATTA+AGG | 0.290367 | 3.4:+98029125 | MS.gene064774:intron |
| GCTTTGCATCCGGTGGTTCC+GGG | 0.335556 | 3.4:+98029208 | MS.gene064774:CDS |
| TCCTTGTATTGGGCAAGTTC+CGG | 0.360940 | 3.4:-98030614 | None:intergenic |
| CCAACAACCGTTCTCTGAAA+TGG | 0.393821 | 3.4:-98030504 | None:intergenic |
| AAGGTAAACCATCCTTGTAT+TGG | 0.397559 | 3.4:-98030625 | None:intergenic |
| GTATTAAGTGTTCCACCAAT+TGG | 0.400126 | 3.4:+98030474 | MS.gene064774:CDS |
| AGGAGTTGGCTTCTCTTAAC+CGG | 0.406431 | 3.4:+98030595 | MS.gene064774:CDS |
| GAATACATAGGAAAGCTAAA+AGG | 0.412985 | 3.4:+98029393 | MS.gene064774:CDS |
| AGGTAAACCATCCTTGTATT+GGG | 0.414912 | 3.4:-98030624 | None:intergenic |
| GGAAAGCTAAAAGGAATTGT+TGG | 0.438571 | 3.4:+98029402 | MS.gene064774:CDS |
| CCATTTCAGAGAACGGTTGT+TGG | 0.447437 | 3.4:+98030504 | MS.gene064774:CDS |
| TATTAAGTGTTCCACCAATT+GGG | 0.465838 | 3.4:+98030475 | MS.gene064774:CDS |
| CACTAAATTATCAAAGGAGT+TGG | 0.484343 | 3.4:+98030581 | MS.gene064774:CDS |
| TGAAATGGCACACACCCAAT+TGG | 0.488937 | 3.4:-98030489 | None:intergenic |
| TTTGAACAAATCTATTTGAC+CGG | 0.492132 | 3.4:-98029370 | None:intergenic |
| ACAGGTGTTTGCTTTGCATC+CGG | 0.493934 | 3.4:+98029198 | MS.gene064774:CDS |
| CAACTTGGTGCAAGGAGGAT+AGG | 0.496825 | 3.4:+98030450 | MS.gene064774:CDS |
| CATATTGTAGTTCTCTAAGA+TGG | 0.497600 | 3.4:-98029512 | None:intergenic |
| TATCCAATGTGAAGATGTTA+GGG | 0.498721 | 3.4:+98032026 | MS.gene064774:CDS |
| CAAATCTATTTGACCGGACA+AGG | 0.513180 | 3.4:-98029364 | None:intergenic |
| TGATATATCAGTTGAAGCAT+TGG | 0.514954 | 3.4:+98029116 | MS.gene064774:intron |
| GACAAAGGATGTTGTGGCAC+AGG | 0.516730 | 3.4:+98031967 | MS.gene064774:CDS |
| TTTCAGAGAACGGTTGTTGG+AGG | 0.525737 | 3.4:+98030507 | MS.gene064774:CDS |
| GATATATCAGTTGAAGCATT+GGG | 0.530185 | 3.4:+98029117 | MS.gene064774:intron |
| CAGTCAGCTATATCCTTGTC+CGG | 0.530888 | 3.4:+98029351 | MS.gene064774:intron |
| GGGAATTAAGGAATTTCTGC+CGG | 0.532610 | 3.4:+98029137 | MS.gene064774:CDS |
| TCCTTCTTACACTGACCTCA+TGG | 0.539258 | 3.4:+98029539 | MS.gene064774:CDS |
| CAAGGAAAACACTGTTGGCT+AGG | 0.539625 | 3.4:-98029446 | None:intergenic |
| GAAGAGGATTGTAAACATCA+AGG | 0.543970 | 3.4:-98030644 | None:intergenic |
| TTGTGGCACAGGAGCAGTAG+AGG | 0.546163 | 3.4:+98031978 | MS.gene064774:CDS |
| ATTCAACACTAAATTATCAA+AGG | 0.555461 | 3.4:+98030575 | MS.gene064774:CDS |
| TGGATCATACCCGGAACCAC+CGG | 0.557250 | 3.4:-98029217 | None:intergenic |
| AATGGCACACACCCAATTGG+TGG | 0.562040 | 3.4:-98030486 | None:intergenic |
| ACCGGAACTTGCCCAATACA+AGG | 0.563043 | 3.4:+98030613 | MS.gene064774:CDS |
| GCTAAAAGGAATTGTTGGAG+AGG | 0.563345 | 3.4:+98029407 | MS.gene064774:CDS |
| CAACCTAGCGATCTTGTCAC+AGG | 0.566337 | 3.4:+98029180 | MS.gene064774:CDS |
| GGATGTGAGTGGATCATACC+CGG | 0.567159 | 3.4:-98029226 | None:intergenic |
| GCATTGAATGCGTGCAAACG+AGG | 0.567601 | 3.4:+98029031 | None:intergenic |
| CTGTGACAAGATCGCTAGGT+TGG | 0.568725 | 3.4:-98029179 | None:intergenic |
| CTTTAAGAAATTGGAAGCAG+AGG | 0.569727 | 3.4:-98029565 | None:intergenic |
| AACCACAAGGAAAACACTGT+TGG | 0.579910 | 3.4:-98029451 | None:intergenic |
| ACCATGAGGTCAGTGTAAGA+AGG | 0.580211 | 3.4:-98029540 | None:intergenic |
| CTAAAAGGAATTGTTGGAGA+GGG | 0.582554 | 3.4:+98029408 | MS.gene064774:CDS |
| AAATATATCAACTTGGTGCA+AGG | 0.585473 | 3.4:+98030442 | MS.gene064774:CDS |
| GTGTGTGCCATTTCAGAGAA+CGG | 0.586756 | 3.4:+98030497 | MS.gene064774:CDS |
| GGTGTTTGCTTTGCATCCGG+TGG | 0.595182 | 3.4:+98029201 | MS.gene064774:CDS |
| TAAAAGGAAATATATCAACT+TGG | 0.596885 | 3.4:+98030435 | MS.gene064774:intron |
| TGAATGCGTGCAAACGAGGA+CGG | 0.600264 | 3.4:+98029035 | None:intergenic |
| TTTAGGATGATGTCAAGAAG+AGG | 0.615681 | 3.4:-98030660 | None:intergenic |
| ACACCTGTGACAAGATCGCT+AGG | 0.618279 | 3.4:-98029183 | None:intergenic |
| GAACTTGCCCAATACAAGGA+TGG | 0.620200 | 3.4:+98030617 | MS.gene064774:CDS |
| GGTTATAAAGTCGTTGACAA+AGG | 0.626516 | 3.4:+98031952 | MS.gene064774:intron |
| AGTCCCTAACATCTTCACAT+TGG | 0.627021 | 3.4:-98032029 | None:intergenic |
| GATTTGTTCAAAGAATACAT+AGG | 0.628210 | 3.4:+98029381 | MS.gene064774:CDS |
| GTCGTTGACAAAGGATGTTG+TGG | 0.629184 | 3.4:+98031961 | MS.gene064774:CDS |
| CGTTACTTCCTTGAACCACA+AGG | 0.633044 | 3.4:-98029464 | None:intergenic |
| TTGCTGTAAACACTCTCCGA+GGG | 0.639385 | 3.4:-98032075 | None:intergenic |
| ATATTTGGATCCAAATACGC+CGG | 0.648403 | 3.4:-98029156 | None:intergenic |
| CTTGCTGTAAACACTCTCCG+AGG | 0.660448 | 3.4:-98032076 | None:intergenic |
| TATATCAACTTGGTGCAAGG+AGG | 0.682785 | 3.4:+98030445 | MS.gene064774:CDS |
| TGGAAGCAGAGGCGACCATG+AGG | 0.684097 | 3.4:-98029554 | None:intergenic |
| TCCACTCACATCCAAAACTG+CGG | 0.722558 | 3.4:+98029236 | MS.gene064774:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATACTCTTAAAAAATAAA+TGG | + | chr3.4:98031180-98031199 | MS.gene064774:intron | 10.0% |
| !! | ATTTCAAATTTATTATTCTT+AGG | + | chr3.4:98030180-98030199 | MS.gene064774:intron | 10.0% |
| !!! | AAAAAAAAAGTATAAATGAA+AGG | - | chr3.4:98029681-98029700 | None:intergenic | 10.0% |
| !!! | ATAATTTTTAAAAACTTCAT+AGG | + | chr3.4:98029746-98029765 | MS.gene064774:intron | 10.0% |
| !!! | ATATTTTTCTGTAAAATTTA+AGG | + | chr3.4:98031584-98031603 | MS.gene064774:intron | 10.0% |
| !!! | TTTTATTAGCAATTTTTTTT+TGG | + | chr3.4:98030719-98030738 | MS.gene064774:intron | 10.0% |
| !!! | TTTTATTATTTTTTTGATCA+GGG | + | chr3.4:98030221-98030240 | MS.gene064774:intron | 10.0% |
| !!! | TTTTTATTATTTTTTTGATC+AGG | + | chr3.4:98030220-98030239 | MS.gene064774:intron | 10.0% |
| !! | AAAAAGTTAAAAAATGATAG+AGG | + | chr3.4:98030051-98030070 | MS.gene064774:intron | 15.0% |
| !! | AAAAGTTAAAAAATGATAGA+GGG | + | chr3.4:98030052-98030071 | MS.gene064774:intron | 15.0% |
| !! | AAATACTCATTTAAAAATAG+AGG | + | chr3.4:98031318-98031337 | MS.gene064774:intron | 15.0% |
| !! | AGTAGTGTAAATATTATATA+TGG | + | chr3.4:98031029-98031048 | MS.gene064774:intron | 15.0% |
| !! | TAAGATTCATATATTTGATA+AGG | + | chr3.4:98030147-98030166 | MS.gene064774:intron | 15.0% |
| !! | TTTACAGAAAAATATATTTG+TGG | - | chr3.4:98031579-98031598 | None:intergenic | 15.0% |
| !!! | AGAAAATATTTGTTTTCATT+AGG | + | chr3.4:98031836-98031855 | MS.gene064774:intron | 15.0% |
| !!! | ATTTTGAAAAGAAAAAAGTA+TGG | + | chr3.4:98030116-98030135 | MS.gene064774:intron | 15.0% |
| !!! | CAATTTTAAACAACTTTTTA+GGG | + | chr3.4:98031358-98031377 | MS.gene064774:intron | 15.0% |
| !!! | CTAAAGTCTTTTTAAAATTA+AGG | - | chr3.4:98030891-98030910 | None:intergenic | 15.0% |
| !!! | TCAATTTTAAACAACTTTTT+AGG | + | chr3.4:98031357-98031376 | MS.gene064774:intron | 15.0% |
| !!! | TTGGTCAAAAATTTTAATAT+TGG | - | chr3.4:98029819-98029838 | None:intergenic | 15.0% |
| !!! | TTTAAGAGTATTTTAATAAG+TGG | - | chr3.4:98031173-98031192 | None:intergenic | 15.0% |
| !!! | TTTAGAGAATTTAAAATGAA+GGG | - | chr3.4:98030294-98030313 | None:intergenic | 15.0% |
| !!! | TTTTAGAGAATTTAAAATGA+AGG | - | chr3.4:98030295-98030314 | None:intergenic | 15.0% |
| !!! | TTTTGAAAAGAAAAAAGTAT+GGG | + | chr3.4:98030117-98030136 | MS.gene064774:intron | 15.0% |
| !! | ATAAATGTGAATATCTCTTT+CGG | - | chr3.4:98029911-98029930 | None:intergenic | 20.0% |
| !! | ATCCTAAATTACCAAAATTA+TGG | + | chr3.4:98030675-98030694 | MS.gene064774:CDS | 20.0% |
| !! | ATGACTTTATGTTATATTAG+TGG | - | chr3.4:98030955-98030974 | None:intergenic | 20.0% |
| !! | ATTCAACACTAAATTATCAA+AGG | + | chr3.4:98030575-98030594 | MS.gene064774:CDS | 20.0% |
| !! | ATTCCTCTTAAAAATATAAG+TGG | + | chr3.4:98031513-98031532 | MS.gene064774:intron | 20.0% |
| !! | TAAAAGGAAATATATCAACT+TGG | + | chr3.4:98030435-98030454 | MS.gene064774:intron | 20.0% |
| !! | TCAAATTTATTATTCTTAGG+CGG | + | chr3.4:98030183-98030202 | MS.gene064774:intron | 20.0% |
| !! | TCACAAAAGTTGTTAAAAAT+TGG | + | chr3.4:98031477-98031496 | MS.gene064774:intron | 20.0% |
| !! | TTCCTCTTAAAAATATAAGT+GGG | + | chr3.4:98031514-98031533 | MS.gene064774:intron | 20.0% |
| !! | TTTCTCTGAATTCTATTAAA+AGG | + | chr3.4:98030419-98030438 | MS.gene064774:intron | 20.0% |
| !!! | AAAATTTTTGACCAACTAAA+AGG | + | chr3.4:98029824-98029843 | MS.gene064774:intron | 20.0% |
| !!! | AAATTTTTGACCAACTAAAA+GGG | + | chr3.4:98029825-98029844 | MS.gene064774:intron | 20.0% |
| !!! | AATTTGTTTTGCTTGTATAA+TGG | + | chr3.4:98031927-98031946 | MS.gene064774:intron | 20.0% |
| !!! | AGTTTTATAGAAATTGTCAT+TGG | - | chr3.4:98030989-98031008 | None:intergenic | 20.0% |
| !!! | ATCACGTAAATTTGAAATTA+TGG | + | chr3.4:98031651-98031670 | MS.gene064774:intron | 20.0% |
| !!! | CTCTTTTTTTTTTTTTTGAG+AGG | + | chr3.4:98031116-98031135 | MS.gene064774:intron | 20.0% |
| !!! | TAAAATGAAGGGATTTTATA+AGG | - | chr3.4:98030283-98030302 | None:intergenic | 20.0% |
| !!! | TACCATAATTTTGGTAATTT+AGG | - | chr3.4:98030680-98030699 | None:intergenic | 20.0% |
| !!! | TTAAAAACTTCATAGGTTTT+GGG | + | chr3.4:98029753-98029772 | MS.gene064774:intron | 20.0% |
| !!! | TTTAAAAACTTCATAGGTTT+TGG | + | chr3.4:98029752-98029771 | MS.gene064774:intron | 20.0% |
| ! | ACTTTATGTTATATTAGTGG+CGG | - | chr3.4:98030952-98030971 | None:intergenic | 25.0% |
| ! | AGTAATTGCTTATTTAACGT+TGG | + | chr3.4:98029720-98029739 | MS.gene064774:intron | 25.0% |
| ! | ATAACAATAGAGAGAGAAAA+AGG | + | chr3.4:98031411-98031430 | MS.gene064774:intron | 25.0% |
| ! | ATATATCACACCAATAGAAA+AGG | - | chr3.4:98029104-98029123 | None:intergenic | 25.0% |
| ! | ATGGAAGACAAAAAAAAAGT+GGG | + | chr3.4:98029971-98029990 | MS.gene064774:intron | 25.0% |
| ! | ATGGCTCAAAAAATATGTAT+TGG | - | chr3.4:98029496-98029515 | None:intergenic | 25.0% |
| ! | CATGCTTTCATAAAAATTAG+TGG | - | chr3.4:98031071-98031090 | None:intergenic | 25.0% |
| ! | GTAATTGCTTATTTAACGTT+GGG | + | chr3.4:98029721-98029740 | MS.gene064774:intron | 25.0% |
| ! | TATGGAAGACAAAAAAAAAG+TGG | + | chr3.4:98029970-98029989 | MS.gene064774:intron | 25.0% |
| ! | TTTCTTATTCCTTTCTAACT+TGG | + | chr3.4:98029317-98029336 | MS.gene064774:intron | 25.0% |
| ! | TTTGAACAAATCTATTTGAC+CGG | - | chr3.4:98029373-98029392 | None:intergenic | 25.0% |
| !! | CAATTTACTTCCTTTTCTAT+TGG | + | chr3.4:98029091-98029110 | MS.gene064774:intron | 25.0% |
| !! | GATTTGTTCAAAGAATACAT+AGG | + | chr3.4:98029381-98029400 | MS.gene064774:CDS | 25.0% |
| !! | GCTGAACTTTTAAATTCTTT+AGG | - | chr3.4:98029635-98029654 | None:intergenic | 25.0% |
| !! | GGTTATACATACCATAATTT+TGG | - | chr3.4:98030689-98030708 | None:intergenic | 25.0% |
| !! | TAAAAACTTCATAGGTTTTG+GGG | + | chr3.4:98029754-98029773 | MS.gene064774:intron | 25.0% |
| !! | TGTATATATTTTCGAAGAAG+AGG | - | chr3.4:98032111-98032130 | None:intergenic | 25.0% |
| !! | TTGCTAATAAAAAGAAGTGT+CGG | - | chr3.4:98030711-98030730 | None:intergenic | 25.0% |
| !! | TTGTTATTGTCCAATAAGAA+TGG | - | chr3.4:98031398-98031417 | None:intergenic | 25.0% |
| !!! | AAAAAAAAAAGAGCACTCTA+AGG | - | chr3.4:98031109-98031128 | None:intergenic | 25.0% |
| !!! | ACTTTTTTTTTGTCTTCCAT+AGG | - | chr3.4:98029971-98029990 | None:intergenic | 25.0% |
| !!! | CATGCAAATACTTTTTAACA+TGG | - | chr3.4:98031877-98031896 | None:intergenic | 25.0% |
| AAAAGGAAGAGAGAGAATAA+AGG | + | chr3.4:98031428-98031447 | MS.gene064774:intron | 30.0% | |
| AAGGTATACTCCTAATAACA+TGG | + | chr3.4:98029585-98029604 | MS.gene064774:intron | 30.0% | |
| ATATTTGAATTACCTCATCC+AGG | + | chr3.4:98030337-98030356 | MS.gene064774:intron | 30.0% | |
| CACTAAATTATCAAAGGAGT+TGG | + | chr3.4:98030581-98030600 | MS.gene064774:CDS | 30.0% | |
| CATTGAAACACCATGTTATT+AGG | - | chr3.4:98029598-98029617 | None:intergenic | 30.0% | |
| GAATACATAGGAAAGCTAAA+AGG | + | chr3.4:98029393-98029412 | MS.gene064774:CDS | 30.0% | |
| TAAAAGTAAGTGAGTGTAAG+TGG | - | chr3.4:98031232-98031251 | None:intergenic | 30.0% | |
| TAATAGTGACCAAGTTAGAA+AGG | - | chr3.4:98029329-98029348 | None:intergenic | 30.0% | |
| TATCCAATGTGAAGATGTTA+GGG | + | chr3.4:98032026-98032045 | MS.gene064774:CDS | 30.0% | |
| TATTAAGTGTTCCACCAATT+GGG | + | chr3.4:98030475-98030494 | MS.gene064774:CDS | 30.0% | |
| TGATATATCAGTTGAAGCAT+TGG | + | chr3.4:98029116-98029135 | MS.gene064774:intron | 30.0% | |
| TTATTGTCCAATAAGAATGG+AGG | - | chr3.4:98031395-98031414 | None:intergenic | 30.0% | |
| ! | CATATTGTAGTTCTCTAAGA+TGG | - | chr3.4:98029515-98029534 | None:intergenic | 30.0% |
| ! | GATATATCAGTTGAAGCATT+GGG | + | chr3.4:98029117-98029136 | MS.gene064774:intron | 30.0% |
| ! | GGAGTATACCTTTAAGAAAT+TGG | - | chr3.4:98029577-98029596 | None:intergenic | 30.0% |
| !! | AAATATATCAACTTGGTGCA+AGG | + | chr3.4:98030442-98030461 | MS.gene064774:CDS | 30.0% |
| !! | AACATTGATTCACCGTATTA+TGG | - | chr3.4:98029878-98029897 | None:intergenic | 30.0% |
| !! | CACCCACTTATATTTTTAAG+AGG | - | chr3.4:98031519-98031538 | None:intergenic | 30.0% |
| !! | TGCTAATAAAAAGAAGTGTC+GGG | - | chr3.4:98030710-98030729 | None:intergenic | 30.0% |
| AAGGTAAACCATCCTTGTAT+TGG | - | chr3.4:98030628-98030647 | None:intergenic | 35.0% | |
| AAGTCGTTGAATACATCTTG+AGG | - | chr3.4:98031280-98031299 | None:intergenic | 35.0% | |
| AGGTAAACCATCCTTGTATT+GGG | - | chr3.4:98030627-98030646 | None:intergenic | 35.0% | |
| ATATTTGGATCCAAATACGC+CGG | - | chr3.4:98029159-98029178 | None:intergenic | 35.0% | |
| CCAATAAGAATGGAGGAAAA+AGG | - | chr3.4:98031388-98031407 | None:intergenic | 35.0% | |
| CTAAAAGGAATTGTTGGAGA+GGG | + | chr3.4:98029408-98029427 | MS.gene064774:CDS | 35.0% | |
| CTATCCAATGTGAAGATGTT+AGG | + | chr3.4:98032025-98032044 | MS.gene064774:CDS | 35.0% | |
| CTCAAAATTATCTACAGTGG+AGG | + | chr3.4:98029943-98029962 | MS.gene064774:intron | 35.0% | |
| CTCCTCAAAATTATCTACAG+TGG | + | chr3.4:98029940-98029959 | MS.gene064774:intron | 35.0% | |
| CTCTGCTTCCAATTTCTTAA+AGG | + | chr3.4:98029566-98029585 | MS.gene064774:CDS | 35.0% | |
| CTTACACATTCTTTAACTCC+TGG | - | chr3.4:98030358-98030377 | None:intergenic | 35.0% | |
| CTTCACATTGGATAGCAAAT+TGG | - | chr3.4:98032020-98032039 | None:intergenic | 35.0% | |
| GAAGAGGATTGTAAACATCA+AGG | - | chr3.4:98030647-98030666 | None:intergenic | 35.0% | |
| GGAAAGCTAAAAGGAATTGT+TGG | + | chr3.4:98029402-98029421 | MS.gene064774:CDS | 35.0% | |
| GGTTATAAAGTCGTTGACAA+AGG | + | chr3.4:98031952-98031971 | MS.gene064774:intron | 35.0% | |
| GTATTAAGTGTTCCACCAAT+TGG | + | chr3.4:98030474-98030493 | MS.gene064774:CDS | 35.0% | |
| ! | ATTGATTCACCGTATTATGG+AGG | - | chr3.4:98029875-98029894 | None:intergenic | 35.0% |
| ! | CCTTTTTCCTCCATTCTTAT+TGG | + | chr3.4:98031385-98031404 | MS.gene064774:intron | 35.0% |
| ! | CTCCACTGTAGATAATTTTG+AGG | - | chr3.4:98029945-98029964 | None:intergenic | 35.0% |
| ! | CTTTAAGAAATTGGAAGCAG+AGG | - | chr3.4:98029568-98029587 | None:intergenic | 35.0% |
| ! | TGTTTTGCTTGTATAATGGC+AGG | + | chr3.4:98031931-98031950 | MS.gene064774:intron | 35.0% |
| ! | TTTAGGATGATGTCAAGAAG+AGG | - | chr3.4:98030663-98030682 | None:intergenic | 35.0% |
| !! | AGTTGAAGCATTGGGAATTA+AGG | + | chr3.4:98029125-98029144 | MS.gene064774:intron | 35.0% |
| AAAGATTGAACTCCCGAGTT+AGG | + | chr3.4:98030917-98030936 | MS.gene064774:intron | 40.0% | |
| AACCACAAGGAAAACACTGT+TGG | - | chr3.4:98029454-98029473 | None:intergenic | 40.0% | |
| AACTAAAAGGGTCGAGTCTA+AGG | + | chr3.4:98029837-98029856 | MS.gene064774:intron | 40.0% | |
| AAGTAGTCAAGTGCACTCTA+AGG | - | chr3.4:98031143-98031162 | None:intergenic | 40.0% | |
| AGGTCTAGACCTCCATAATA+CGG | + | chr3.4:98029863-98029882 | MS.gene064774:intron | 40.0% | |
| AGTCCCTAACATCTTCACAT+TGG | - | chr3.4:98032032-98032051 | None:intergenic | 40.0% | |
| CAAATCTATTTGACCGGACA+AGG | - | chr3.4:98029367-98029386 | None:intergenic | 40.0% | |
| CATTCTTTAACTCCTGGATG+AGG | - | chr3.4:98030352-98030371 | None:intergenic | 40.0% | |
| GCTAAAAGGAATTGTTGGAG+AGG | + | chr3.4:98029407-98029426 | MS.gene064774:CDS | 40.0% | |
| GGGAATTAAGGAATTTCTGC+CGG | + | chr3.4:98029137-98029156 | MS.gene064774:CDS | 40.0% | |
| ! | AGATCGCTAGGTTGGATATT+TGG | - | chr3.4:98029174-98029193 | None:intergenic | 40.0% |
| ! | AGTGTTTTCCTTGTGGTTCA+AGG | + | chr3.4:98029456-98029475 | MS.gene064774:CDS | 40.0% |
| ! | ATGTTAGGGACTACGTTTTC+TGG | + | chr3.4:98032040-98032059 | MS.gene064774:CDS | 40.0% |
| ! | CAAAATACGTACCGCAGTTT+TGG | - | chr3.4:98029250-98029269 | None:intergenic | 40.0% |
| ! | TGTTAGGGACTACGTTTTCT+GGG | + | chr3.4:98032041-98032060 | MS.gene064774:CDS | 40.0% |
| ! | TTAGACTCGACCCTTTTAGT+TGG | - | chr3.4:98029838-98029857 | None:intergenic | 40.0% |
| !! | TATATCAACTTGGTGCAAGG+AGG | + | chr3.4:98030445-98030464 | MS.gene064774:CDS | 40.0% |
| AAGGGTCGAGTCTAAGGAAA+AGG | + | chr3.4:98029843-98029862 | MS.gene064774:intron | 45.0% | |
| ACAGGTGTTTGCTTTGCATC+CGG | + | chr3.4:98029198-98029217 | MS.gene064774:CDS | 45.0% | |
| ACCATGAGGTCAGTGTAAGA+AGG | - | chr3.4:98029543-98029562 | None:intergenic | 45.0% | |
| AGAACGGTTGTTGGAGGAAT+TGG | + | chr3.4:98030513-98030532 | MS.gene064774:CDS | 45.0% | |
| ATCTACAGTGGAGGAACCTA+TGG | + | chr3.4:98029952-98029971 | MS.gene064774:intron | 45.0% | |
| CAGTCAGCTATATCCTTGTC+CGG | + | chr3.4:98029351-98029370 | MS.gene064774:intron | 45.0% | |
| CCATTTCAGAGAACGGTTGT+TGG | + | chr3.4:98030504-98030523 | MS.gene064774:CDS | 45.0% | |
| CGTTACTTCCTTGAACCACA+AGG | - | chr3.4:98029467-98029486 | None:intergenic | 45.0% | |
| GAACTTGCCCAATACAAGGA+TGG | + | chr3.4:98030617-98030636 | MS.gene064774:CDS | 45.0% | |
| GACTAGGGAGTCTGAATTCA+AGG | + | chr3.4:98029063-98029082 | MS.gene064774:intron | 45.0% | |
| GTCGTTGACAAAGGATGTTG+TGG | + | chr3.4:98031961-98031980 | MS.gene064774:CDS | 45.0% | |
| TCCACTCACATCCAAAACTG+CGG | + | chr3.4:98029236-98029255 | MS.gene064774:CDS | 45.0% | |
| TCCTTCTTACACTGACCTCA+TGG | + | chr3.4:98029539-98029558 | MS.gene064774:CDS | 45.0% | |
| TCCTTGTATTGGGCAAGTTC+CGG | - | chr3.4:98030617-98030636 | None:intergenic | 45.0% | |
| TGAAATGGCACACACCCAAT+TGG | - | chr3.4:98030492-98030511 | None:intergenic | 45.0% | |
| TTGCTGTAAACACTCTCCGA+GGG | - | chr3.4:98032078-98032097 | None:intergenic | 45.0% | |
| TTTCAGAGAACGGTTGTTGG+AGG | + | chr3.4:98030507-98030526 | MS.gene064774:CDS | 45.0% | |
| ! | AGCCAACAGTGTTTTCCTTG+TGG | + | chr3.4:98029449-98029468 | MS.gene064774:CDS | 45.0% |
| ! | AGGAGTTGGCTTCTCTTAAC+CGG | + | chr3.4:98030595-98030614 | MS.gene064774:CDS | 45.0% |
| ! | CAAGGAAAACACTGTTGGCT+AGG | - | chr3.4:98029449-98029468 | None:intergenic | 45.0% |
| ! | CCAACAACCGTTCTCTGAAA+TGG | - | chr3.4:98030507-98030526 | None:intergenic | 45.0% |
| ! | CGGATCTAGAATCCTAACTC+GGG | - | chr3.4:98030932-98030951 | None:intergenic | 45.0% |
| ! | GCGGATCTAGAATCCTAACT+CGG | - | chr3.4:98030933-98030952 | None:intergenic | 45.0% |
| !! | GTGTGTGCCATTTCAGAGAA+CGG | + | chr3.4:98030497-98030516 | MS.gene064774:CDS | 45.0% |
| AATGGCACACACCCAATTGG+TGG | - | chr3.4:98030489-98030508 | None:intergenic | 50.0% | |
| ACACCTGTGACAAGATCGCT+AGG | - | chr3.4:98029186-98029205 | None:intergenic | 50.0% | |
| ACCGGAACTTGCCCAATACA+AGG | + | chr3.4:98030613-98030632 | MS.gene064774:CDS | 50.0% | |
| CAACCTAGCGATCTTGTCAC+AGG | + | chr3.4:98029180-98029199 | MS.gene064774:CDS | 50.0% | |
| CGGACAAGGATATAGCTGAC+TGG | - | chr3.4:98029353-98029372 | None:intergenic | 50.0% | |
| CTGTGACAAGATCGCTAGGT+TGG | - | chr3.4:98029182-98029201 | None:intergenic | 50.0% | |
| GACAAAGGATGTTGTGGCAC+AGG | + | chr3.4:98031967-98031986 | MS.gene064774:CDS | 50.0% | |
| GGAATTTCTGCCGGCGTATT+TGG | + | chr3.4:98029146-98029165 | MS.gene064774:CDS | 50.0% | |
| GGATGTGAGTGGATCATACC+CGG | - | chr3.4:98029229-98029248 | None:intergenic | 50.0% | |
| ! | CTGGGACAGTTTTCATCCCT+CGG | + | chr3.4:98032059-98032078 | MS.gene064774:CDS | 50.0% |
| ! | CTTGCTGTAAACACTCTCCG+AGG | - | chr3.4:98032079-98032098 | None:intergenic | 50.0% |
| !! | CAACTTGGTGCAAGGAGGAT+AGG | + | chr3.4:98030450-98030469 | MS.gene064774:CDS | 50.0% |
| !!! | ACCGCAGTTTTGGATGTGAG+TGG | - | chr3.4:98029240-98029259 | None:intergenic | 50.0% |
| GGTGTTTGCTTTGCATCCGG+TGG | + | chr3.4:98029201-98029220 | MS.gene064774:CDS | 55.0% | |
| TGCTTTGCATCCGGTGGTTC+CGG | + | chr3.4:98029207-98029226 | MS.gene064774:CDS | 55.0% | |
| TGGATCATACCCGGAACCAC+CGG | - | chr3.4:98029220-98029239 | None:intergenic | 55.0% | |
| TTGTGGCACAGGAGCAGTAG+AGG | + | chr3.4:98031978-98031997 | MS.gene064774:CDS | 55.0% | |
| AACGAGGACGGTAGGGGACT+AGG | + | chr3.4:98029047-98029066 | MS.gene064774:intron | 60.0% | |
| ACGAGGACGGTAGGGGACTA+GGG | + | chr3.4:98029048-98029067 | MS.gene064774:intron | 60.0% | |
| CGTGCAAACGAGGACGGTAG+GGG | + | chr3.4:98029041-98029060 | MS.gene064774:intron | 60.0% | |
| GCGTGCAAACGAGGACGGTA+GGG | + | chr3.4:98029040-98029059 | MS.gene064774:intron | 60.0% | |
| GCTTTGCATCCGGTGGTTCC+GGG | + | chr3.4:98029208-98029227 | MS.gene064774:CDS | 60.0% | |
| TGCGTGCAAACGAGGACGGT+AGG | + | chr3.4:98029039-98029058 | MS.gene064774:intron | 60.0% | |
| TGGAAGCAGAGGCGACCATG+AGG | - | chr3.4:98029557-98029576 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 98029038 | 98032143 | 98029038 | ID=MS.gene064774 |
| chr3.4 | mRNA | 98029038 | 98032143 | 98029038 | ID=MS.gene064774.t1;Parent=MS.gene064774 |
| chr3.4 | exon | 98029038 | 98029056 | 98029038 | ID=MS.gene064774.t1.exon1;Parent=MS.gene064774.t1 |
| chr3.4 | CDS | 98029038 | 98029056 | 98029038 | ID=cds.MS.gene064774.t1;Parent=MS.gene064774.t1 |
| chr3.4 | exon | 98029127 | 98029257 | 98029127 | ID=MS.gene064774.t1.exon2;Parent=MS.gene064774.t1 |
| chr3.4 | CDS | 98029127 | 98029257 | 98029127 | ID=cds.MS.gene064774.t1;Parent=MS.gene064774.t1 |
| chr3.4 | exon | 98029354 | 98029587 | 98029354 | ID=MS.gene064774.t1.exon3;Parent=MS.gene064774.t1 |
| chr3.4 | CDS | 98029354 | 98029587 | 98029354 | ID=cds.MS.gene064774.t1;Parent=MS.gene064774.t1 |
| chr3.4 | exon | 98030441 | 98030696 | 98030441 | ID=MS.gene064774.t1.exon4;Parent=MS.gene064774.t1 |
| chr3.4 | CDS | 98030441 | 98030696 | 98030441 | ID=cds.MS.gene064774.t1;Parent=MS.gene064774.t1 |
| chr3.4 | exon | 98031953 | 98032143 | 98031953 | ID=MS.gene064774.t1.exon5;Parent=MS.gene064774.t1 |
| chr3.4 | CDS | 98031953 | 98032143 | 98031953 | ID=cds.MS.gene064774.t1;Parent=MS.gene064774.t1 |
| Gene Sequence |
| Protein sequence |
