Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065155.t1 | XP_003592634.1 | 87.4 | 239 | 30 | 0 | 1 | 239 | 1 | 239 | 2.50E-115 | 424.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065155.t1 | G7IC98 | 87.4 | 239 | 30 | 0 | 1 | 239 | 1 | 239 | 1.8e-115 | 424.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056097 | MS.gene065155 | 0.801024 | 1.09E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065155.t1 | MTR_1g110370 | 92.887 | 239 | 17 | 0 | 1 | 239 | 1 | 239 | 4.38e-162 | 448 |
| MS.gene065155.t1 | MTR_6g008660 | 61.417 | 254 | 71 | 9 | 1 | 238 | 1 | 243 | 3.24e-88 | 262 |
| MS.gene065155.t1 | MTR_5g083820 | 65.339 | 251 | 61 | 9 | 1 | 235 | 1 | 241 | 8.58e-85 | 254 |
| MS.gene065155.t1 | MTR_1g110360 | 60.156 | 256 | 68 | 10 | 1 | 238 | 1 | 240 | 3.01e-82 | 246 |
| MS.gene065155.t1 | MTR_6g083920 | 36.759 | 253 | 98 | 9 | 20 | 234 | 2 | 230 | 2.32e-37 | 131 |
| MS.gene065155.t1 | MTR_5g056040 | 35.169 | 236 | 121 | 7 | 25 | 238 | 25 | 250 | 9.09e-32 | 117 |
| MS.gene065155.t1 | MTR_4g100570 | 33.469 | 245 | 106 | 8 | 26 | 230 | 11 | 238 | 2.66e-26 | 102 |
| MS.gene065155.t1 | MTR_5g056110 | 37.888 | 161 | 73 | 6 | 77 | 230 | 73 | 213 | 4.28e-22 | 91.3 |
| MS.gene065155.t1 | MTR_4g086830 | 49.057 | 106 | 32 | 2 | 1 | 106 | 1 | 84 | 1.76e-20 | 86.3 |
| MS.gene065155.t1 | MTR_8g005205 | 36.290 | 124 | 57 | 3 | 119 | 236 | 445 | 552 | 2.37e-13 | 69.3 |
| MS.gene065155.t1 | MTR_8g070650 | 45.614 | 57 | 31 | 0 | 172 | 228 | 171 | 227 | 4.44e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065155.t1 | AT1G25370 | 34.892 | 278 | 118 | 10 | 1 | 230 | 1 | 263 | 4.45e-32 | 118 |
| MS.gene065155.t1 | AT1G25370 | 34.892 | 278 | 118 | 10 | 1 | 230 | 1 | 263 | 4.45e-32 | 118 |
| MS.gene065155.t1 | AT1G68340 | 34.000 | 250 | 117 | 9 | 17 | 230 | 2 | 239 | 3.14e-29 | 110 |
| MS.gene065155.t1 | AT1G68340 | 34.000 | 250 | 117 | 9 | 17 | 230 | 2 | 239 | 3.57e-29 | 110 |
| MS.gene065155.t1 | AT3G18295 | 41.667 | 216 | 101 | 7 | 28 | 232 | 13 | 214 | 2.58e-25 | 99.4 |
| MS.gene065155.t1 | AT1G68340 | 33.333 | 231 | 106 | 9 | 17 | 211 | 2 | 220 | 8.84e-23 | 93.2 |
| MS.gene065155.t1 | AT3G60410 | 42.537 | 134 | 62 | 4 | 110 | 228 | 187 | 320 | 6.02e-21 | 90.1 |
| MS.gene065155.t1 | AT3G60410 | 42.537 | 134 | 62 | 4 | 110 | 228 | 187 | 320 | 6.02e-21 | 90.1 |
| MS.gene065155.t1 | AT3G60410 | 42.537 | 134 | 62 | 4 | 110 | 228 | 187 | 320 | 6.02e-21 | 90.1 |
| MS.gene065155.t1 | AT1G48770 | 34.328 | 201 | 95 | 6 | 28 | 226 | 11 | 176 | 1.30e-15 | 72.8 |
| MS.gene065155.t1 | AT1G48770 | 34.328 | 201 | 95 | 6 | 28 | 226 | 11 | 176 | 1.30e-15 | 72.8 |
| MS.gene065155.t1 | AT1G48770 | 34.328 | 201 | 95 | 6 | 28 | 226 | 11 | 176 | 1.30e-15 | 72.8 |
| MS.gene065155.t1 | AT4G17440 | 32.283 | 127 | 65 | 3 | 123 | 228 | 83 | 209 | 3.08e-12 | 64.3 |
| MS.gene065155.t1 | AT4G17440 | 32.283 | 127 | 65 | 3 | 123 | 228 | 83 | 209 | 3.08e-12 | 64.3 |
| MS.gene065155.t1 | AT4G17440 | 32.283 | 127 | 65 | 3 | 123 | 228 | 83 | 209 | 4.85e-12 | 63.9 |
Find 64 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGCTTCTGAACATTTCT+AGG | 0.189823 | 1.2:-81775126 | None:intergenic |
| AGAAGAGAGTGGTGCTGTTA+TGG | 0.254438 | 1.2:+81774543 | MS.gene065155:CDS |
| CCCACTTCAAACAAGGAAAA+TGG | 0.298577 | 1.2:-81774615 | None:intergenic |
| CTCTCGGTTTGTCGCCGTTA+AGG | 0.320855 | 1.2:+81774959 | MS.gene065155:CDS |
| GAAGAGAGTGGTGCTGTTAT+GGG | 0.326106 | 1.2:+81774544 | MS.gene065155:CDS |
| AACATCATCAGGAACCTTAT+AGG | 0.333378 | 1.2:-81775278 | None:intergenic |
| GATTAATGCTGATTCCTATA+AGG | 0.358878 | 1.2:+81775264 | MS.gene065155:CDS |
| AGGGTCGTCGGCGGCTGCGG+CGG | 0.358935 | 1.2:+81774855 | MS.gene065155:CDS |
| AGAAGGGTCGTCGGCGGCTG+CGG | 0.377657 | 1.2:+81774852 | MS.gene065155:CDS |
| AAAGAGAATGGTGGTGGAGA+AGG | 0.384258 | 1.2:+81774835 | MS.gene065155:CDS |
| CTTCAATCTTTCACCTTCAC+CGG | 0.392665 | 1.2:-81774575 | None:intergenic |
| GTAAACTTCACCTTCTTCTC+AGG | 0.414913 | 1.2:-81775021 | None:intergenic |
| CCGCCGTTACCATTCCTTAA+CGG | 0.425360 | 1.2:-81774973 | None:intergenic |
| GGGTCGTCGGCGGCTGCGGC+GGG | 0.434545 | 1.2:+81774856 | MS.gene065155:CDS |
| AAGAGAATGGTGGTGGAGAA+GGG | 0.452542 | 1.2:+81774836 | MS.gene065155:CDS |
| TTGAAGAAGGAGAAAGAGAA+TGG | 0.453989 | 1.2:+81774823 | MS.gene065155:CDS |
| CACACCTTGCCGTTATTCTC+AGG | 0.454028 | 1.2:-81775301 | None:intergenic |
| TGGTGTCACCGCCGGAGAAT+AGG | 0.459611 | 1.2:+81774695 | MS.gene065155:CDS |
| TACTTTGTCATTGATGAAGA+AGG | 0.461580 | 1.2:+81775041 | MS.gene065155:CDS |
| GCTGTTATGGGTAATGGTTC+CGG | 0.467366 | 1.2:+81774556 | MS.gene065155:CDS |
| AAGGAGAAAGAGAATGGTGG+TGG | 0.478905 | 1.2:+81774829 | MS.gene065155:CDS |
| TTATTCTCAGGAACATCATC+AGG | 0.482796 | 1.2:-81775289 | None:intergenic |
| TAGAAATGTTCAGAAGCAAA+TGG | 0.488562 | 1.2:+81775128 | MS.gene065155:CDS |
| AGAATCGATGGTGGTGATGA+TGG | 0.491610 | 1.2:+81774730 | MS.gene065155:CDS |
| GGCGGCTGCGGCGGGAGAGA+AGG | 0.491775 | 1.2:+81774864 | MS.gene065155:CDS |
| ATCTCAGACAACCACATACC+AGG | 0.508509 | 1.2:-81775244 | None:intergenic |
| AAGGTTGATGTTTGATCTGA+AGG | 0.512312 | 1.2:+81774771 | MS.gene065155:CDS |
| AACGGCGGTGGTAAGTTAAG+AGG | 0.518465 | 1.2:+81774988 | MS.gene065155:CDS |
| AGTGGTGCTGTTATGGGTAA+TGG | 0.525672 | 1.2:+81774550 | MS.gene065155:CDS |
| AGGTGTGGAATTTGAGAACA+AGG | 0.527843 | 1.2:+81774884 | MS.gene065155:CDS |
| GGTTTGTCGCCGTTAAGGAA+TGG | 0.536117 | 1.2:+81774964 | MS.gene065155:CDS |
| GAAGATTTCATCATGATGAC+TGG | 0.542082 | 1.2:+81775072 | MS.gene065155:CDS |
| TGTCAGAAGAATCCTGAAAA+CGG | 0.554244 | 1.2:+81774658 | MS.gene065155:CDS |
| GATGATGTTCCTGAGAATAA+CGG | 0.555714 | 1.2:+81775292 | MS.gene065155:CDS |
| CTGGTCAAAAGCCTCATAGA+AGG | 0.556564 | 1.2:+81775091 | MS.gene065155:CDS |
| ATGGGTAATGGTTCCGGTGA+AGG | 0.563977 | 1.2:+81774562 | MS.gene065155:CDS |
| TGGTGGTTGTCCTGAGAAGA+AGG | 0.564497 | 1.2:+81775011 | MS.gene065155:CDS |
| TGGTGGTGGAGAAGGGTCGT+CGG | 0.571110 | 1.2:+81774843 | MS.gene065155:CDS |
| TTAAGGAATGGTAACGGCGG+TGG | 0.572770 | 1.2:+81774976 | MS.gene065155:CDS |
| CTGCGGCGGGAGAGAAGGTG+TGG | 0.573569 | 1.2:+81774869 | MS.gene065155:CDS |
| AGTCTGTTCATCCTATTCTC+CGG | 0.575110 | 1.2:-81774706 | None:intergenic |
| TCCGTCGATGGTGTCACCGC+CGG | 0.576373 | 1.2:+81774687 | MS.gene065155:CDS |
| GGTGGTAAGTTAAGAGGTGG+TGG | 0.580505 | 1.2:+81774994 | MS.gene065155:CDS |
| GGATCGATGCTATGCGTGAA+AGG | 0.580862 | 1.2:+81774752 | MS.gene065155:CDS |
| AAACGGTGACGATCCGTCGA+TGG | 0.583098 | 1.2:+81774675 | MS.gene065155:CDS |
| TTTCAGGATTCTTCTGACAC+CGG | 0.588036 | 1.2:-81774654 | None:intergenic |
| TTTGATCTGAAGGTTGAAGC+TGG | 0.588078 | 1.2:+81774781 | MS.gene065155:CDS |
| ATGAACAGACTTAGAATCGA+TGG | 0.593451 | 1.2:+81774718 | MS.gene065155:CDS |
| TGGAATTTGAGAACAAGGAG+AGG | 0.605032 | 1.2:+81774889 | MS.gene065155:CDS |
| GAATCGATGGTGGTGATGAT+GGG | 0.609894 | 1.2:+81774731 | MS.gene065155:CDS |
| TGGTGGAGAAGGGTCGTCGG+CGG | 0.613413 | 1.2:+81774846 | MS.gene065155:CDS |
| GGAAAATGGAAGTTGTGAAG+AGG | 0.618304 | 1.2:-81774601 | None:intergenic |
| TCTCAGACAACCACATACCA+GGG | 0.619276 | 1.2:-81775243 | None:intergenic |
| TCGCCGTTAAGGAATGGTAA+CGG | 0.633228 | 1.2:+81774970 | MS.gene065155:CDS |
| AAGAAGGAGAAAGAGAATGG+TGG | 0.634822 | 1.2:+81774826 | MS.gene065155:CDS |
| CTGTTCATCCTATTCTCCGG+CGG | 0.645163 | 1.2:-81774703 | None:intergenic |
| GGCGGTGGTAAGTTAAGAGG+TGG | 0.646062 | 1.2:+81774991 | MS.gene065155:CDS |
| TCCGGCGGTGACACCATCGA+CGG | 0.658472 | 1.2:-81774688 | None:intergenic |
| AACAGACTTAGAATCGATGG+TGG | 0.665206 | 1.2:+81774721 | MS.gene065155:CDS |
| TCTGGTGAAGAAGAAGAGAG+TGG | 0.667630 | 1.2:+81774532 | MS.gene065155:CDS |
| CTTAACGGCGACAAACCGAG+AGG | 0.678447 | 1.2:-81774958 | None:intergenic |
| TGTTCCTGAGAATAACGGCA+AGG | 0.698747 | 1.2:+81775297 | MS.gene065155:CDS |
| ATCTGAAGGTTGAAGCTGGT+AGG | 0.709950 | 1.2:+81774785 | MS.gene065155:CDS |
| CCGTTAAGGAATGGTAACGG+CGG | 0.752215 | 1.2:+81774973 | MS.gene065155:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAATGAAATTAAAAATT+AGG | - | chr1.2:81775181-81775200 | None:intergenic | 10.0% |
| ATTGATGAGAAAAAACCTCT+CGG | + | chr1.2:81774943-81774962 | MS.gene065155:CDS | 30.0% | |
| ATTTGCTTCTGAACATTTCT+AGG | - | chr1.2:81775129-81775148 | None:intergenic | 30.0% | |
| GCTAAATTAAGTGTTCTGAT+TGG | + | chr1.2:81775373-81775392 | MS.gene065155:intron | 30.0% | |
| TACTTTGTCATTGATGAAGA+AGG | + | chr1.2:81775041-81775060 | MS.gene065155:CDS | 30.0% | |
| TAGAAATGTTCAGAAGCAAA+TGG | + | chr1.2:81775128-81775147 | MS.gene065155:CDS | 30.0% | |
| !! | AACATTTCTAGGTCTCTTTT+TGG | - | chr1.2:81775118-81775137 | None:intergenic | 30.0% |
| !! | ACATTTCTAGGTCTCTTTTT+GGG | - | chr1.2:81775117-81775136 | None:intergenic | 30.0% |
| !! | GATTAATGCTGATTCCTATA+AGG | + | chr1.2:81775264-81775283 | MS.gene065155:CDS | 30.0% |
| AACATCATCAGGAACCTTAT+AGG | - | chr1.2:81775281-81775300 | None:intergenic | 35.0% | |
| ATGAACAGACTTAGAATCGA+TGG | + | chr1.2:81774718-81774737 | MS.gene065155:CDS | 35.0% | |
| GAAGATTTCATCATGATGAC+TGG | + | chr1.2:81775072-81775091 | MS.gene065155:CDS | 35.0% | |
| GATGATGTTCCTGAGAATAA+CGG | + | chr1.2:81775292-81775311 | MS.gene065155:CDS | 35.0% | |
| TGTCAGAAGAATCCTGAAAA+CGG | + | chr1.2:81774658-81774677 | MS.gene065155:CDS | 35.0% | |
| TTATTCTCAGGAACATCATC+AGG | - | chr1.2:81775292-81775311 | None:intergenic | 35.0% | |
| TTGAAGAAGGAGAAAGAGAA+TGG | + | chr1.2:81774823-81774842 | MS.gene065155:CDS | 35.0% | |
| !! | AAGGTTGATGTTTGATCTGA+AGG | + | chr1.2:81774771-81774790 | MS.gene065155:CDS | 35.0% |
| !! | ATTTTCCTTGTTTGAAGTGG+GGG | + | chr1.2:81774617-81774636 | MS.gene065155:CDS | 35.0% |
| !! | CATTTTCCTTGTTTGAAGTG+GGG | + | chr1.2:81774616-81774635 | MS.gene065155:CDS | 35.0% |
| !! | CCATTTTCCTTGTTTGAAGT+GGG | + | chr1.2:81774615-81774634 | MS.gene065155:CDS | 35.0% |
| !! | GAAAGATGCGATTTTGAAGA+AGG | + | chr1.2:81774810-81774829 | MS.gene065155:CDS | 35.0% |
| !! | TCCATTTTCCTTGTTTGAAG+TGG | + | chr1.2:81774614-81774633 | MS.gene065155:CDS | 35.0% |
| !! | TGTTCTGATTGGTTTGATCT+TGG | + | chr1.2:81775384-81775403 | MS.gene065155:intron | 35.0% |
| !! | TTTGATCTTGGTTTTTGCAG+AGG | + | chr1.2:81775396-81775415 | MS.gene065155:intron | 35.0% |
| !! | TTTTCTGGAGAGAATGGAAA+GGG | + | chr1.2:81774913-81774932 | MS.gene065155:CDS | 35.0% |
| !! | TTTTTCTGGAGAGAATGGAA+AGG | + | chr1.2:81774912-81774931 | MS.gene065155:CDS | 35.0% |
| AACAGACTTAGAATCGATGG+TGG | + | chr1.2:81774721-81774740 | MS.gene065155:CDS | 40.0% | |
| AAGAAGGAGAAAGAGAATGG+TGG | + | chr1.2:81774826-81774845 | MS.gene065155:CDS | 40.0% | |
| AGGTGTGGAATTTGAGAACA+AGG | + | chr1.2:81774884-81774903 | MS.gene065155:CDS | 40.0% | |
| AGTCTGTTCATCCTATTCTC+CGG | - | chr1.2:81774709-81774728 | None:intergenic | 40.0% | |
| CCCACTTCAAACAAGGAAAA+TGG | - | chr1.2:81774618-81774637 | None:intergenic | 40.0% | |
| CTTCAATCTTTCACCTTCAC+CGG | - | chr1.2:81774578-81774597 | None:intergenic | 40.0% | |
| GGAAAATGGAAGTTGTGAAG+AGG | - | chr1.2:81774604-81774623 | None:intergenic | 40.0% | |
| GTAAACTTCACCTTCTTCTC+AGG | - | chr1.2:81775024-81775043 | None:intergenic | 40.0% | |
| TGGAATTTGAGAACAAGGAG+AGG | + | chr1.2:81774889-81774908 | MS.gene065155:CDS | 40.0% | |
| TTTCAGGATTCTTCTGACAC+CGG | - | chr1.2:81774657-81774676 | None:intergenic | 40.0% | |
| TTTGATCTGAAGGTTGAAGC+TGG | + | chr1.2:81774781-81774800 | MS.gene065155:CDS | 40.0% | |
| ! | AGAACAAGGAGAGGTTTTTC+TGG | + | chr1.2:81774898-81774917 | MS.gene065155:CDS | 40.0% |
| !! | AGAGGTTTTTCTGGAGAGAA+TGG | + | chr1.2:81774907-81774926 | MS.gene065155:CDS | 40.0% |
| AAGGAGAAAGAGAATGGTGG+TGG | + | chr1.2:81774829-81774848 | MS.gene065155:CDS | 45.0% | |
| ATCTCAGACAACCACATACC+AGG | - | chr1.2:81775247-81775266 | None:intergenic | 45.0% | |
| ATCTGAAGGTTGAAGCTGGT+AGG | + | chr1.2:81774785-81774804 | MS.gene065155:CDS | 45.0% | |
| CTGGTCAAAAGCCTCATAGA+AGG | + | chr1.2:81775091-81775110 | MS.gene065155:CDS | 45.0% | |
| TCGCCGTTAAGGAATGGTAA+CGG | + | chr1.2:81774970-81774989 | MS.gene065155:CDS | 45.0% | |
| TCTCAGACAACCACATACCA+GGG | - | chr1.2:81775246-81775265 | None:intergenic | 45.0% | |
| TCTGGTGAAGAAGAAGAGAG+TGG | + | chr1.2:81774532-81774551 | MS.gene065155:CDS | 45.0% | |
| TGATTCCCCCACTTCAAACA+AGG | - | chr1.2:81774625-81774644 | None:intergenic | 45.0% | |
| TGTTCCTGAGAATAACGGCA+AGG | + | chr1.2:81775297-81775316 | MS.gene065155:CDS | 45.0% | |
| ! | AGAATCGATGGTGGTGATGA+TGG | + | chr1.2:81774730-81774749 | MS.gene065155:CDS | 45.0% |
| ! | AGACACTTTTCCCTGGTATG+TGG | + | chr1.2:81775233-81775252 | MS.gene065155:intron | 45.0% |
| ! | GAATCGATGGTGGTGATGAT+GGG | + | chr1.2:81774731-81774750 | MS.gene065155:CDS | 45.0% |
| ! | GCTGTTATGGGTAATGGTTC+CGG | + | chr1.2:81774556-81774575 | MS.gene065155:CDS | 45.0% |
| ! | TTTGTGCAGACACTTTTCCC+TGG | + | chr1.2:81775226-81775245 | MS.gene065155:intron | 45.0% |
| !! | AAAGAGAATGGTGGTGGAGA+AGG | + | chr1.2:81774835-81774854 | MS.gene065155:CDS | 45.0% |
| !! | AAGAGAATGGTGGTGGAGAA+GGG | + | chr1.2:81774836-81774855 | MS.gene065155:CDS | 45.0% |
| !! | AGAAGAGAGTGGTGCTGTTA+TGG | + | chr1.2:81774543-81774562 | MS.gene065155:CDS | 45.0% |
| !! | AGTGGTGCTGTTATGGGTAA+TGG | + | chr1.2:81774550-81774569 | MS.gene065155:CDS | 45.0% |
| !! | CTCTTTTTGGGCCTTCTATG+AGG | - | chr1.2:81775105-81775124 | None:intergenic | 45.0% |
| !! | GAAGAGAGTGGTGCTGTTAT+GGG | + | chr1.2:81774544-81774563 | MS.gene065155:CDS | 45.0% |
| AACGGCGGTGGTAAGTTAAG+AGG | + | chr1.2:81774988-81775007 | MS.gene065155:CDS | 50.0% | |
| CACACCTTGCCGTTATTCTC+AGG | - | chr1.2:81775304-81775323 | None:intergenic | 50.0% | |
| CCGCCGTTACCATTCCTTAA+CGG | - | chr1.2:81774976-81774995 | None:intergenic | 50.0% | |
| CTGTTCATCCTATTCTCCGG+CGG | - | chr1.2:81774706-81774725 | None:intergenic | 50.0% | |
| GGATCGATGCTATGCGTGAA+AGG | + | chr1.2:81774752-81774771 | MS.gene065155:CDS | 50.0% | |
| GGTGGTAAGTTAAGAGGTGG+TGG | + | chr1.2:81774994-81775013 | MS.gene065155:CDS | 50.0% | |
| GGTTTGTCGCCGTTAAGGAA+TGG | + | chr1.2:81774964-81774983 | MS.gene065155:CDS | 50.0% | |
| TGGTGGTTGTCCTGAGAAGA+AGG | + | chr1.2:81775011-81775030 | MS.gene065155:CDS | 50.0% | |
| ! | ATGGGTAATGGTTCCGGTGA+AGG | + | chr1.2:81774562-81774581 | MS.gene065155:CDS | 50.0% |
| !! | CCGTTAAGGAATGGTAACGG+CGG | + | chr1.2:81774973-81774992 | MS.gene065155:CDS | 50.0% |
| !! | TTAAGGAATGGTAACGGCGG+TGG | + | chr1.2:81774976-81774995 | MS.gene065155:CDS | 50.0% |
| AAACGGTGACGATCCGTCGA+TGG | + | chr1.2:81774675-81774694 | MS.gene065155:CDS | 55.0% | |
| CTTAACGGCGACAAACCGAG+AGG | - | chr1.2:81774961-81774980 | None:intergenic | 55.0% | |
| GGCGGTGGTAAGTTAAGAGG+TGG | + | chr1.2:81774991-81775010 | MS.gene065155:CDS | 55.0% | |
| ! | CTCTCGGTTTGTCGCCGTTA+AGG | + | chr1.2:81774959-81774978 | MS.gene065155:CDS | 55.0% |
| ! | GACGGATCGTCACCGTTTTC+AGG | - | chr1.2:81774673-81774692 | None:intergenic | 55.0% |
| GGGGGAATCAGCGTTCTCTC+CGG | + | chr1.2:81774635-81774654 | MS.gene065155:CDS | 60.0% | |
| !! | TGGTGGTGGAGAAGGGTCGT+CGG | + | chr1.2:81774843-81774862 | MS.gene065155:CDS | 60.0% |
| !! | TGGTGTCACCGCCGGAGAAT+AGG | + | chr1.2:81774695-81774714 | MS.gene065155:CDS | 60.0% |
| TCCGGCGGTGACACCATCGA+CGG | - | chr1.2:81774691-81774710 | None:intergenic | 65.0% | |
| TGGTGGAGAAGGGTCGTCGG+CGG | + | chr1.2:81774846-81774865 | MS.gene065155:CDS | 65.0% | |
| !! | TCCGTCGATGGTGTCACCGC+CGG | + | chr1.2:81774687-81774706 | MS.gene065155:CDS | 65.0% |
| AGAAGGGTCGTCGGCGGCTG+CGG | + | chr1.2:81774852-81774871 | MS.gene065155:CDS | 70.0% | |
| CTGCGGCGGGAGAGAAGGTG+TGG | + | chr1.2:81774869-81774888 | MS.gene065155:CDS | 70.0% | |
| ! | AGGGTCGTCGGCGGCTGCGG+CGG | + | chr1.2:81774855-81774874 | MS.gene065155:CDS | 80.0% |
| ! | GGCGGCTGCGGCGGGAGAGA+AGG | + | chr1.2:81774864-81774883 | MS.gene065155:CDS | 80.0% |
| ! | GGGTCGTCGGCGGCTGCGGC+GGG | + | chr1.2:81774856-81774875 | MS.gene065155:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 81774523 | 81775421 | 81774523 | ID=MS.gene065155 |
| chr1.2 | mRNA | 81774523 | 81775421 | 81774523 | ID=MS.gene065155.t1;Parent=MS.gene065155 |
| chr1.2 | exon | 81774523 | 81775152 | 81774523 | ID=MS.gene065155.t1.exon1;Parent=MS.gene065155.t1 |
| chr1.2 | CDS | 81774523 | 81775152 | 81774523 | ID=cds.MS.gene065155.t1;Parent=MS.gene065155.t1 |
| chr1.2 | exon | 81775235 | 81775318 | 81775235 | ID=MS.gene065155.t1.exon2;Parent=MS.gene065155.t1 |
| chr1.2 | CDS | 81775235 | 81775318 | 81775235 | ID=cds.MS.gene065155.t1;Parent=MS.gene065155.t1 |
| chr1.2 | exon | 81775416 | 81775421 | 81775416 | ID=MS.gene065155.t1.exon3;Parent=MS.gene065155.t1 |
| chr1.2 | CDS | 81775416 | 81775421 | 81775416 | ID=cds.MS.gene065155.t1;Parent=MS.gene065155.t1 |
| Gene Sequence |
| Protein sequence |
