AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065171

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065171.t1 MTR_2g079980 97.983 595 12 0 1 595 3 597 0.0 1201
MS.gene065171.t1 MTR_8g059150 69.398 598 180 3 1 595 37 634 0.0 852
MS.gene065171.t1 MTR_5g025470 56.291 604 235 7 1 588 47 637 0.0 674
MS.gene065171.t1 MTR_1g093990 56.766 606 239 10 1 587 59 660 0.0 651
MS.gene065171.t1 MTR_1g054935 48.287 613 270 6 1 588 149 739 0.0 586
MS.gene065171.t1 MTR_1g054935 49.236 589 258 5 25 588 5 577 0.0 579
MS.gene065171.t1 MTR_1g054960 48.680 606 271 7 1 588 1 584 0.0 577
MS.gene065171.t1 MTR_1g096580 48.494 631 272 10 1 588 47 667 0.0 572
MS.gene065171.t1 MTR_7g106880 50.163 612 254 9 1 585 138 725 0.0 558
MS.gene065171.t1 MTR_7g106880 51.107 587 242 8 26 585 6 574 0.0 553
MS.gene065171.t1 MTR_5g096390 44.175 618 310 12 1 587 67 680 3.42e-168 494
MS.gene065171.t1 MTR_1g108340 31.868 546 327 10 29 544 93 623 3.93e-82 272
MS.gene065171.t1 MTR_1g108340 31.868 546 327 10 29 544 93 623 4.73e-82 272
MS.gene065171.t1 MTR_4g116540 31.597 576 365 16 28 587 74 636 9.97e-74 248
MS.gene065171.t1 MTR_1g115790 31.273 550 341 10 25 540 118 664 7.78e-72 245
MS.gene065171.t1 MTR_6g066240 31.002 529 331 12 25 525 62 584 1.02e-71 244
MS.gene065171.t1 MTR_4g076940 31.895 533 319 12 27 525 51 573 9.70e-71 241
MS.gene065171.t1 MTR_4g076940 32.325 529 315 13 27 524 91 607 2.06e-70 241
MS.gene065171.t1 MTR_4g076900 30.705 596 365 17 27 585 27 611 6.98e-70 238
MS.gene065171.t1 MTR_8g093840 29.564 619 384 16 8 585 26 633 8.27e-70 238
MS.gene065171.t1 MTR_4g076970 30.394 533 320 14 27 524 49 565 1.68e-69 238
MS.gene065171.t1 MTR_7g100120 29.289 577 355 12 1 532 85 653 8.25e-69 237
MS.gene065171.t1 MTR_4g094050 30.370 540 346 14 27 544 71 602 1.18e-68 236
MS.gene065171.t1 MTR_4g094060 30.556 540 345 14 27 544 71 602 2.18e-68 235
MS.gene065171.t1 MTR_4g094010 31.864 499 313 10 25 503 46 537 1.34e-67 232
MS.gene065171.t1 MTR_4g094090 31.004 558 338 17 25 548 27 571 9.33e-65 224
MS.gene065171.t1 MTR_3g096410 29.110 584 383 13 27 585 56 633 2.07e-62 218
MS.gene065171.t1 MTR_4g093845 31.002 529 320 14 25 524 55 567 5.90e-62 216
MS.gene065171.t1 MTR_2g078080 28.028 578 376 15 27 585 48 604 3.83e-61 214
MS.gene065171.t1 MTR_1g094660 30.920 511 308 11 21 493 509 1012 2.81e-58 211
MS.gene065171.t1 MTR_8g107450 42.322 267 146 4 1 263 43 305 1.01e-57 207
MS.gene065171.t1 MTR_4g076940 31.533 463 283 11 88 524 20 474 2.23e-57 203
MS.gene065171.t1 MTR_1g094660 44.000 250 137 3 21 267 509 758 9.85e-56 203
MS.gene065171.t1 MTR_7g098780 26.412 602 407 14 1 580 818 1405 1.52e-55 204
MS.gene065171.t1 MTR_7g098780 27.957 558 342 16 28 532 174 724 3.83e-45 172
MS.gene065171.t1 MTR_1g099570 28.361 543 347 14 18 547 39 552 1.59e-55 198
MS.gene065171.t1 MTR_4g123850 27.375 621 383 18 1 583 832 1422 4.95e-55 202
MS.gene065171.t1 MTR_4g123850 24.819 552 344 16 29 522 168 706 4.16e-42 163
MS.gene065171.t1 MTR_2g102640 26.010 619 413 14 1 593 831 1430 5.53e-55 202
MS.gene065171.t1 MTR_2g102640 26.476 593 373 17 29 564 167 753 8.71e-46 174
MS.gene065171.t1 MTR_7g104150 26.700 603 383 19 1 569 856 1433 7.67e-55 201
MS.gene065171.t1 MTR_7g104150 25.709 564 352 19 16 522 170 723 6.83e-35 141
MS.gene065171.t1 MTR_2g102660 26.010 619 413 14 1 593 828 1427 1.21e-54 201
MS.gene065171.t1 MTR_2g102660 26.599 594 371 17 28 563 166 752 5.93e-47 178
MS.gene065171.t1 MTR_2g102670 25.848 619 414 14 1 593 811 1410 7.00e-54 199
MS.gene065171.t1 MTR_2g102670 25.177 564 341 16 29 535 167 706 6.11e-38 150
MS.gene065171.t1 MTR_5g030910 40.000 265 154 4 1 263 25 286 1.22e-53 195
MS.gene065171.t1 MTR_2g101090 26.910 602 388 13 1 571 844 1424 1.47e-53 197
MS.gene065171.t1 MTR_2g101090 23.652 575 348 19 28 543 178 720 5.38e-29 123
MS.gene065171.t1 MTR_7g101780 28.969 611 364 16 25 586 510 1099 1.73e-53 197
MS.gene065171.t1 MTR_4g054020 28.452 478 318 11 86 544 28 500 5.11e-53 191
MS.gene065171.t1 MTR_4g011630 28.108 555 361 14 1 532 839 1378 5.80e-53 196
MS.gene065171.t1 MTR_4g011630 27.725 523 308 16 25 490 169 678 3.56e-39 154
MS.gene065171.t1 MTR_1g063920 29.795 537 306 17 3 493 479 990 7.42e-53 195
MS.gene065171.t1 MTR_7g104110 26.678 566 365 15 1 537 848 1392 1.17e-52 195
MS.gene065171.t1 MTR_7g104110 25.128 585 364 18 16 537 164 737 1.57e-37 149
MS.gene065171.t1 MTR_7g098800 27.605 547 370 13 3 532 778 1315 1.76e-52 194
MS.gene065171.t1 MTR_7g098800 27.289 568 333 20 28 532 132 682 2.57e-46 176
MS.gene065171.t1 MTR_4g011640 27.061 558 359 14 3 532 838 1375 2.28e-52 194
MS.gene065171.t1 MTR_4g011640 27.573 515 313 15 28 490 170 676 2.03e-38 152
MS.gene065171.t1 MTR_7g098750 27.303 608 404 16 1 585 586 1178 2.80e-52 194
MS.gene065171.t1 MTR_7g098750 24.645 422 292 10 130 532 27 441 9.26e-30 125
MS.gene065171.t1 MTR_3g463680 27.667 553 366 12 1 532 816 1355 3.11e-52 194
MS.gene065171.t1 MTR_3g463680 27.135 527 327 14 28 504 167 686 1.05e-36 147
MS.gene065171.t1 MTR_8g014360 27.857 560 364 11 1 536 878 1421 4.12e-52 193
MS.gene065171.t1 MTR_8g014360 26.080 625 380 20 28 586 177 785 3.10e-42 164
MS.gene065171.t1 MTR_1g050525 28.167 600 397 15 3 585 869 1451 4.85e-52 193
MS.gene065171.t1 MTR_1g050525 25.673 557 352 16 18 522 169 715 4.50e-42 163
MS.gene065171.t1 MTR_7g098750 27.303 608 404 16 1 585 856 1448 8.06e-52 192
MS.gene065171.t1 MTR_7g098750 26.429 560 348 15 28 532 161 711 8.39e-46 174
MS.gene065171.t1 MTR_1g011650 26.557 610 393 17 1 580 850 1434 1.20e-51 192
MS.gene065171.t1 MTR_1g011650 26.679 536 337 14 29 513 166 696 2.56e-37 149
MS.gene065171.t1 MTR_7g098760 26.246 602 409 15 1 580 852 1440 2.93e-51 191
MS.gene065171.t1 MTR_7g098760 27.307 531 318 16 28 502 161 679 4.81e-43 166
MS.gene065171.t1 MTR_7g104130 26.252 579 351 15 1 537 856 1400 3.57e-51 191
MS.gene065171.t1 MTR_7g104130 25.577 563 354 17 16 522 170 723 1.43e-32 134
MS.gene065171.t1 MTR_4g113070 27.125 553 377 11 1 536 817 1360 2.00e-50 188
MS.gene065171.t1 MTR_4g113070 25.865 549 337 15 28 518 149 685 1.26e-33 137
MS.gene065171.t1 MTR_1g011640 26.437 609 395 16 1 580 827 1411 2.67e-50 188
MS.gene065171.t1 MTR_1g011640 28.386 539 324 19 29 513 154 684 1.96e-33 137
MS.gene065171.t1 MTR_7g098320 25.944 609 411 14 1 585 848 1440 4.28e-50 187
MS.gene065171.t1 MTR_7g098320 26.825 548 341 15 28 522 157 697 6.74e-43 166
MS.gene065171.t1 MTR_7g104130 26.268 552 330 15 1 512 856 1370 1.54e-49 186
MS.gene065171.t1 MTR_7g104130 25.577 563 354 17 16 522 170 723 1.17e-32 134
MS.gene065171.t1 MTR_7g098750 27.692 520 350 10 1 504 856 1365 2.43e-49 185
MS.gene065171.t1 MTR_7g098750 26.429 560 348 15 28 532 161 711 7.53e-46 174
MS.gene065171.t1 MTR_7g104100 25.919 544 348 11 20 531 872 1392 3.72e-49 184
MS.gene065171.t1 MTR_7g104100 27.549 559 321 20 29 522 182 721 2.09e-40 158
MS.gene065171.t1 MTR_5g070320 27.107 605 404 16 1 582 544 1134 4.62e-49 184
MS.gene065171.t1 MTR_5g070320 25.935 401 283 8 116 504 4 402 9.20e-31 129
MS.gene065171.t1 MTR_5g070320 27.107 605 404 16 1 582 640 1230 4.74e-49 184
MS.gene065171.t1 MTR_5g070320 26.042 480 308 11 70 504 21 498 9.62e-35 141
MS.gene065171.t1 MTR_1g492950 26.576 587 394 14 1 564 867 1439 4.76e-49 184
MS.gene065171.t1 MTR_1g492950 26.598 485 298 15 29 462 189 666 2.00e-36 146
MS.gene065171.t1 MTR_5g070320 27.197 603 402 16 1 580 831 1419 9.51e-49 183
MS.gene065171.t1 MTR_5g070320 28.053 524 328 12 28 504 168 689 2.15e-47 179
MS.gene065171.t1 MTR_7g098740 26.471 612 394 18 1 580 814 1401 1.98e-48 182
MS.gene065171.t1 MTR_7g098740 26.071 560 350 15 28 532 161 711 1.78e-44 171
MS.gene065171.t1 MTR_4g058000 43.600 250 138 3 21 267 499 748 2.01e-47 179
MS.gene065171.t1 MTR_2g095390 26.316 608 383 20 29 595 126 709 6.35e-47 176
MS.gene065171.t1 MTR_7g098370 25.123 609 416 14 1 585 814 1406 9.11e-47 177
MS.gene065171.t1 MTR_7g098370 26.151 543 343 14 28 518 161 697 5.02e-42 163
MS.gene065171.t1 MTR_3g107870 26.909 550 374 11 1 532 863 1402 2.05e-46 176
MS.gene065171.t1 MTR_3g107870 26.316 551 340 17 28 522 165 705 1.56e-42 165
MS.gene065171.t1 MTR_4g011620 28.108 555 361 14 1 532 829 1368 5.96e-46 175
MS.gene065171.t1 MTR_4g011620 29.301 529 310 16 28 502 160 678 4.43e-43 166
MS.gene065171.t1 MTR_7g098300 26.136 616 397 18 1 585 852 1440 7.04e-45 172
MS.gene065171.t1 MTR_7g098300 26.297 559 350 15 28 532 161 711 2.27e-44 170
MS.gene065171.t1 MTR_8g014360 35.401 274 167 5 1 265 878 1150 1.05e-44 171
MS.gene065171.t1 MTR_8g014360 26.957 575 349 18 28 543 177 739 3.55e-42 164
MS.gene065171.t1 MTR_7g098320 26.909 550 338 16 28 522 157 697 5.25e-43 166
MS.gene065171.t1 MTR_7g098320 35.316 269 158 6 1 254 848 1115 6.97e-40 157
MS.gene065171.t1 MTR_3g040670 38.075 239 140 5 49 282 201 436 6.50e-40 151
MS.gene065171.t1 MTR_7g098890 25.314 557 373 16 1 532 757 1295 1.59e-35 143
MS.gene065171.t1 MTR_7g098890 23.985 542 373 14 25 538 132 662 5.72e-30 126
MS.gene065171.t1 MTR_4g089130 70.238 84 25 0 144 227 1 84 7.88e-33 121
MS.gene065171.t1 MTR_8g103450 34.123 211 109 6 3 211 225 407 2.00e-26 112
MS.gene065171.t1 MTR_7g407080 23.200 500 324 13 36 518 118 574 1.26e-21 99.4
MS.gene065171.t1 MTR_1567s0010 35.838 173 99 5 40 209 253 416 9.06e-20 92.8
MS.gene065171.t1 MTR_5g075955 31.944 216 129 8 26 234 366 570 8.44e-18 87.4
MS.gene065171.t1 MTR_5g075955 31.944 216 129 8 26 234 478 682 1.30e-17 87.0
MS.gene065171.t1 MTR_6g012535 27.778 216 130 8 29 231 16 218 5.16e-16 77.8
MS.gene065171.t1 MTR_4g109720 27.982 218 144 8 29 241 404 613 2.40e-15 79.7
MS.gene065171.t1 MTR_1g059830 32.057 209 126 8 29 230 396 595 3.07e-15 79.3
MS.gene065171.t1 MTR_5g075960 30.047 213 137 7 26 234 480 684 3.13e-15 79.7
MS.gene065171.t1 MTR_7g091380 29.384 211 136 6 40 248 381 580 1.06e-14 78.6
MS.gene065171.t1 MTR_7g091380 33.562 146 87 3 40 183 583 720 1.09e-14 78.6
MS.gene065171.t1 MTR_7g091380 33.562 146 87 3 40 183 583 720 1.15e-14 78.2
MS.gene065171.t1 MTR_7g091380 29.384 211 136 6 40 248 401 600 1.17e-14 78.2
MS.gene065171.t1 MTR_3g086430 27.511 229 150 8 26 248 1015 1233 1.45e-14 77.8
MS.gene065171.t1 MTR_7g060570 31.285 179 105 6 33 204 932 1099 3.13e-14 76.6
MS.gene065171.t1 MTR_3g093430 30.928 194 120 7 26 213 378 563 3.15e-14 76.6
MS.gene065171.t1 MTR_5g029750 29.545 220 139 8 29 242 1006 1215 7.97e-14 75.5
MS.gene065171.t1 MTR_5g029750 27.322 183 119 7 37 213 381 555 1.46e-11 68.2
MS.gene065171.t1 MTR_4g081190 29.688 192 125 6 26 213 357 542 2.42e-13 73.9
MS.gene065171.t1 MTR_4g081190 24.891 229 156 8 26 248 1004 1222 3.14e-12 70.5
MS.gene065171.t1 MTR_6g465300 31.944 216 125 11 29 234 488 691 2.80e-13 73.2
MS.gene065171.t1 MTR_6g465300 31.944 216 125 11 29 234 488 691 2.91e-13 73.2
MS.gene065171.t1 MTR_6g009150 30.928 194 120 7 26 213 376 561 3.48e-13 73.6
MS.gene065171.t1 MTR_6g009150 28.866 194 120 9 29 213 1034 1218 3.14e-11 67.0
MS.gene065171.t1 MTR_7g091350 42.500 80 46 0 152 231 81 160 4.15e-13 67.8
MS.gene065171.t1 MTR_7g079540 28.333 240 132 8 26 238 97 323 4.40e-13 71.2
MS.gene065171.t1 MTR_1g025560 30.526 190 122 6 28 213 1010 1193 5.30e-13 72.8
MS.gene065171.t1 MTR_6g009030 30.052 193 123 6 26 213 375 560 6.95e-13 72.4
MS.gene065171.t1 MTR_6g009030 28.272 191 125 6 29 213 1016 1200 9.48e-12 68.9
MS.gene065171.t1 MTR_7g033710 26.106 226 137 11 29 240 442 651 9.00e-13 71.6
MS.gene065171.t1 MTR_6g009110 30.052 193 123 6 26 213 382 567 9.27e-13 72.0
MS.gene065171.t1 MTR_2g018320 29.032 186 122 6 29 210 376 555 1.06e-12 72.0
MS.gene065171.t1 MTR_6g088670 28.889 180 114 6 37 210 1027 1198 1.07e-12 71.6
MS.gene065171.t1 MTR_6g009200 29.534 193 124 6 26 213 375 560 1.13e-12 71.6
MS.gene065171.t1 MTR_6g009200 29.381 194 119 9 29 213 1037 1221 4.36e-12 69.7
MS.gene065171.t1 MTR_6g009090 30.168 179 113 6 40 213 404 575 1.19e-12 71.2
MS.gene065171.t1 MTR_3g099990 30.208 192 105 8 30 209 545 719 1.21e-12 71.6
MS.gene065171.t1 MTR_6g009080 30.256 195 118 9 28 213 229 414 1.65e-12 70.5
MS.gene065171.t1 MTR_3g437990 25.540 278 159 13 40 300 555 801 1.66e-12 71.2
MS.gene065171.t1 MTR_6g009070 30.570 193 122 6 26 213 315 500 2.30e-12 70.9
MS.gene065171.t1 MTR_6g009070 26.000 250 163 11 29 267 951 1189 9.50e-12 68.9
MS.gene065171.t1 MTR_6g008800 29.534 193 124 6 26 213 375 560 2.30e-12 70.9
MS.gene065171.t1 MTR_6g008800 29.381 194 119 9 29 213 1024 1208 8.71e-12 68.9
MS.gene065171.t1 MTR_6g078080 27.315 216 141 8 29 238 382 587 2.62e-12 70.5
MS.gene065171.t1 MTR_6g008820 30.052 193 123 6 26 213 233 418 2.88e-12 70.5
MS.gene065171.t1 MTR_6g008820 27.854 219 135 9 29 237 890 1095 1.29e-11 68.2
MS.gene065171.t1 MTR_4g077930 28.962 183 117 6 37 213 950 1125 2.99e-12 70.5
MS.gene065171.t1 MTR_6g008820 30.052 193 123 6 26 213 363 548 3.13e-12 70.5
MS.gene065171.t1 MTR_6g008820 27.854 219 135 9 29 237 1020 1225 1.38e-11 68.2
MS.gene065171.t1 MTR_4g077930 28.962 183 117 6 37 213 1059 1234 3.34e-12 70.1
MS.gene065171.t1 MTR_7g079540 30.526 190 100 6 26 195 97 274 4.61e-12 67.8
MS.gene065171.t1 MTR_8g022270 24.282 383 240 16 29 387 615 971 4.64e-12 69.7
MS.gene065171.t1 MTR_6g008820 30.052 193 123 6 26 213 41 226 4.75e-12 69.7
MS.gene065171.t1 MTR_6g008820 27.854 219 135 9 29 237 698 903 1.76e-11 67.8
MS.gene065171.t1 MTR_7g051100 25.991 227 152 8 26 246 371 587 5.09e-12 69.7
MS.gene065171.t1 MTR_6g008820 30.220 182 115 6 37 213 160 334 8.02e-12 68.9
MS.gene065171.t1 MTR_6g008820 27.854 219 135 9 29 237 806 1011 1.28e-11 68.2
MS.gene065171.t1 MTR_7g102070 28.992 238 149 10 26 255 440 665 8.05e-12 68.9
MS.gene065171.t1 MTR_3g080220 29.167 192 126 7 26 213 409 594 1.11e-11 68.6
MS.gene065171.t1 MTR_4g124050 27.749 191 125 6 29 213 1067 1250 1.95e-11 67.8
MS.gene065171.t1 MTR_3g107800 28.272 191 124 6 29 213 1043 1226 2.53e-11 67.4
MS.gene065171.t1 MTR_4g123990 29.741 232 138 12 37 258 1061 1277 2.60e-11 67.4
MS.gene065171.t1 MTR_1g063170 27.731 238 152 9 26 255 413 638 2.91e-11 67.4
MS.gene065171.t1 MTR_1g086150 27.014 211 140 8 26 228 398 602 3.16e-11 67.0
MS.gene065171.t1 MTR_1g086080 27.604 192 129 6 26 213 403 588 3.67e-11 67.0
MS.gene065171.t1 MTR_2g018530 28.495 186 123 6 29 210 386 565 3.99e-11 66.6
MS.gene065171.t1 MTR_4g124000 30.645 186 110 9 37 213 1061 1236 4.47e-11 66.6
MS.gene065171.t1 MTR_2g018350 23.846 260 181 9 29 282 376 624 5.37e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065171.t1 AT4G27420 61.526 603 218 8 1 592 37 636 0.0 717
MS.gene065171.t1 AT1G31770 55.798 595 254 4 1 588 53 645 0.0 664
MS.gene065171.t1 AT3G25620 56.623 604 241 8 1 585 68 669 0.0 640
MS.gene065171.t1 AT5G06530 48.392 622 260 9 1 590 157 749 0.0 585
MS.gene065171.t1 AT5G06530 48.392 622 260 9 1 590 157 749 0.0 585
MS.gene065171.t1 AT5G06530 49.270 548 233 6 1 516 157 691 0.0 539
MS.gene065171.t1 AT1G71960 47.209 627 286 10 1 588 40 660 0.0 537
MS.gene065171.t1 AT5G06530 50.000 496 223 3 46 516 1 496 4.97e-175 505
MS.gene065171.t1 AT3G13220 42.695 616 322 9 1 587 65 678 2.73e-163 482
MS.gene065171.t1 AT3G25620 55.471 393 157 6 1 375 68 460 6.92e-144 425
MS.gene065171.t1 AT2G01320 32.523 535 338 9 29 544 90 620 1.39e-88 288
MS.gene065171.t1 AT2G01320 32.523 535 338 9 29 544 90 620 1.39e-88 288
MS.gene065171.t1 AT2G01320 32.523 535 338 9 29 544 90 620 1.36e-87 287
MS.gene065171.t1 AT2G01320 32.523 535 338 9 29 544 90 620 1.40e-87 287
MS.gene065171.t1 AT2G01320 32.523 535 338 9 29 544 90 620 1.40e-87 287
MS.gene065171.t1 AT2G01320 32.523 535 338 9 29 544 90 620 1.40e-87 287
MS.gene065171.t1 AT2G37360 30.221 589 364 11 1 551 98 677 3.61e-79 265
MS.gene065171.t1 AT2G01320 34.943 435 267 7 29 451 90 520 1.11e-77 255
MS.gene065171.t1 AT2G01320 34.943 435 267 7 29 451 90 520 1.11e-77 255
MS.gene065171.t1 AT3G55110 32.014 556 348 12 1 532 63 612 1.22e-75 255
MS.gene065171.t1 AT3G21090 30.795 604 354 18 27 585 43 627 1.79e-74 251
MS.gene065171.t1 AT2G13610 30.269 631 386 18 1 585 13 635 2.57e-74 250
MS.gene065171.t1 AT3G55130 32.343 572 332 16 1 532 73 629 4.03e-74 251
MS.gene065171.t1 AT5G13580 30.017 573 365 9 1 540 68 637 1.22e-73 250
MS.gene065171.t1 AT3G55090 29.213 623 396 15 1 585 73 688 2.90e-72 246
MS.gene065171.t1 AT3G53510 32.103 542 334 11 22 540 119 649 4.37e-72 246
MS.gene065171.t1 AT1G51500 31.947 601 353 19 27 585 42 628 9.07e-72 244
MS.gene065171.t1 AT1G17840 30.712 534 326 12 25 525 65 587 1.38e-70 241
MS.gene065171.t1 AT3G55100 30.090 555 355 10 1 532 22 566 1.57e-70 240
MS.gene065171.t1 AT3G55100 30.090 555 355 10 1 532 22 566 1.57e-70 240
MS.gene065171.t1 AT2G39350 28.881 599 375 12 1 551 67 662 2.96e-67 233
MS.gene065171.t1 AT1G51460 30.583 618 358 20 23 587 24 623 9.81e-67 230
MS.gene065171.t1 AT5G19410 29.680 593 358 15 21 587 58 617 2.23e-64 223
MS.gene065171.t1 AT5G19410 29.680 593 358 15 21 587 67 626 3.01e-64 223
MS.gene065171.t1 AT2G37280 29.511 532 338 14 29 538 682 1198 5.77e-64 228
MS.gene065171.t1 AT2G37280 25.379 528 338 14 45 521 12 534 3.89e-36 145
MS.gene065171.t1 AT2G37280 29.511 532 338 14 29 538 869 1385 6.03e-64 228
MS.gene065171.t1 AT2G37280 24.913 578 339 17 29 521 154 721 3.64e-37 148
MS.gene065171.t1 AT2G37280 29.478 536 333 15 29 538 840 1356 6.41e-64 228
MS.gene065171.t1 AT2G37280 26.230 549 339 17 29 521 154 692 6.83e-41 160
MS.gene065171.t1 AT4G15236 29.872 549 347 13 3 532 800 1329 9.24e-63 225
MS.gene065171.t1 AT4G15236 26.847 555 348 15 12 516 136 682 1.43e-41 162
MS.gene065171.t1 AT3G53480 29.401 534 336 13 29 538 877 1393 1.79e-62 224
MS.gene065171.t1 AT3G53480 25.501 549 331 18 28 516 188 718 7.55e-37 147
MS.gene065171.t1 AT4G15233 29.529 552 345 14 3 532 740 1269 1.89e-61 221
MS.gene065171.t1 AT4G15233 27.032 566 333 18 12 516 76 622 1.52e-40 159
MS.gene065171.t1 AT4G15233 29.529 552 345 14 3 532 740 1269 1.89e-61 221
MS.gene065171.t1 AT4G15233 27.032 566 333 18 12 516 76 622 1.52e-40 159
MS.gene065171.t1 AT4G15233 29.529 552 345 14 3 532 784 1313 2.13e-61 221
MS.gene065171.t1 AT4G15233 27.920 548 333 18 12 516 138 666 6.94e-42 163
MS.gene065171.t1 AT4G15233 29.529 552 345 14 3 532 793 1322 2.18e-61 221
MS.gene065171.t1 AT4G15233 26.325 566 328 19 12 516 138 675 2.93e-35 142
MS.gene065171.t1 AT4G15233 29.529 552 345 14 3 532 802 1331 2.30e-61 221
MS.gene065171.t1 AT4G15233 27.032 566 333 18 12 516 138 684 2.01e-40 158
MS.gene065171.t1 AT1G53270 29.112 529 338 12 23 538 44 548 9.86e-61 212
MS.gene065171.t1 AT3G16340 29.508 549 361 11 1 532 809 1348 1.12e-59 216
MS.gene065171.t1 AT3G16340 27.986 561 334 17 18 524 154 698 1.62e-42 165
MS.gene065171.t1 AT1G59870 29.359 562 355 11 1 537 867 1411 1.20e-59 216
MS.gene065171.t1 AT1G59870 27.054 499 291 16 28 469 185 667 1.08e-41 162
MS.gene065171.t1 AT3G16340 29.508 549 361 11 1 532 814 1353 1.34e-59 216
MS.gene065171.t1 AT3G16340 28.292 562 336 18 18 524 154 703 2.30e-44 170
MS.gene065171.t1 AT4G15233 28.819 576 342 16 3 532 802 1355 5.48e-59 214
MS.gene065171.t1 AT4G15233 27.032 566 333 18 12 516 138 684 2.12e-40 158
MS.gene065171.t1 AT4G15230 28.752 553 356 14 3 536 731 1264 6.59e-58 211
MS.gene065171.t1 AT4G15230 27.978 554 335 20 16 513 61 606 2.06e-41 161
MS.gene065171.t1 AT4G15230 28.752 553 356 14 3 536 810 1343 8.91e-58 210
MS.gene065171.t1 AT4G15230 27.978 554 335 20 16 513 140 685 2.70e-41 161
MS.gene065171.t1 AT4G15230 28.752 553 356 14 3 536 810 1343 8.91e-58 210
MS.gene065171.t1 AT4G15230 27.978 554 335 20 16 513 140 685 2.70e-41 161
MS.gene065171.t1 AT2G28070 28.713 606 371 19 29 595 133 716 9.07e-58 206
MS.gene065171.t1 AT2G28070 28.713 606 371 19 29 595 133 716 9.07e-58 206
MS.gene065171.t1 AT4G15233 29.400 517 330 13 38 532 685 1188 1.36e-57 209
MS.gene065171.t1 AT4G15233 27.899 552 335 18 12 518 76 609 3.15e-42 164
MS.gene065171.t1 AT4G15233 29.400 517 330 13 38 532 685 1188 1.36e-57 209
MS.gene065171.t1 AT4G15233 27.899 552 335 18 12 518 76 609 3.15e-42 164
MS.gene065171.t1 AT1G15210 28.164 561 363 11 1 537 840 1384 1.90e-57 209
MS.gene065171.t1 AT1G15210 26.306 555 341 17 28 525 183 726 3.74e-39 154
MS.gene065171.t1 AT2G37280 29.200 500 313 13 29 504 840 1322 2.11e-57 209
MS.gene065171.t1 AT2G37280 26.230 549 339 17 29 521 154 692 7.42e-41 159
MS.gene065171.t1 AT2G37010 29.402 602 365 15 21 582 492 1073 1.45e-56 206
MS.gene065171.t1 AT2G37010 29.402 602 365 15 21 582 492 1073 1.45e-56 206
MS.gene065171.t1 AT1G53390 32.290 511 274 16 27 485 521 1011 2.59e-56 206
MS.gene065171.t1 AT4G15215 29.144 549 351 15 3 532 807 1336 1.47e-54 201
MS.gene065171.t1 AT4G15215 27.829 539 326 18 29 513 153 682 9.10e-41 159
MS.gene065171.t1 AT1G15520 27.225 573 378 14 1 550 825 1381 1.51e-54 201
MS.gene065171.t1 AT1G15520 27.051 573 358 17 28 546 168 734 3.93e-43 166
MS.gene065171.t1 AT4G15215 29.144 549 351 15 3 532 797 1326 1.65e-54 201
MS.gene065171.t1 AT4G15215 26.889 569 348 17 29 544 150 703 9.38e-39 153
MS.gene065171.t1 AT4G15215 29.144 549 351 15 3 532 797 1326 1.65e-54 201
MS.gene065171.t1 AT4G15215 26.889 569 348 17 29 544 150 703 9.38e-39 153
MS.gene065171.t1 AT4G15215 29.144 549 351 15 3 532 797 1326 1.65e-54 201
MS.gene065171.t1 AT4G15215 26.889 569 348 17 29 544 150 703 9.38e-39 153
MS.gene065171.t1 AT4G15215 29.144 549 351 15 3 532 797 1326 1.65e-54 201
MS.gene065171.t1 AT4G15215 26.889 569 348 17 29 544 150 703 9.38e-39 153
MS.gene065171.t1 AT4G15215 29.144 549 351 15 3 532 800 1329 1.65e-54 201
MS.gene065171.t1 AT4G15215 27.509 538 322 17 29 513 153 675 1.02e-38 153
MS.gene065171.t1 AT4G15215 29.144 549 351 15 3 532 804 1333 1.75e-54 201
MS.gene065171.t1 AT4G15215 27.193 570 352 18 29 544 150 710 1.08e-40 159
MS.gene065171.t1 AT4G15215 29.144 549 351 15 3 532 804 1333 1.75e-54 201
MS.gene065171.t1 AT4G15215 27.193 570 352 18 29 544 150 710 1.08e-40 159
MS.gene065171.t1 AT4G15215 29.144 549 351 15 3 532 804 1333 1.75e-54 201
MS.gene065171.t1 AT4G15215 27.193 570 352 18 29 544 150 710 1.08e-40 159
MS.gene065171.t1 AT4G15215 29.144 549 351 15 3 532 804 1333 1.75e-54 201
MS.gene065171.t1 AT4G15215 27.193 570 352 18 29 544 150 710 1.08e-40 159
MS.gene065171.t1 AT4G15215 29.144 549 351 15 3 532 804 1333 1.75e-54 201
MS.gene065171.t1 AT4G15215 27.193 570 352 18 29 544 150 710 1.08e-40 159
MS.gene065171.t1 AT2G26910 25.833 600 415 14 1 580 818 1407 1.64e-53 197
MS.gene065171.t1 AT2G26910 25.812 585 361 16 28 549 149 723 1.12e-36 147
MS.gene065171.t1 AT2G36380 26.773 564 367 13 1 537 852 1396 1.78e-52 194
MS.gene065171.t1 AT2G36380 25.045 551 360 13 19 522 183 727 1.98e-41 161
MS.gene065171.t1 AT4G15230 28.709 519 334 13 3 504 810 1309 1.96e-52 194
MS.gene065171.t1 AT4G15230 27.899 552 338 20 16 513 140 685 1.43e-41 162
MS.gene065171.t1 AT5G52860 27.568 555 348 16 4 547 19 530 1.61e-51 187
MS.gene065171.t1 AT3G30842 27.580 533 361 11 1 518 821 1343 3.86e-51 191
MS.gene065171.t1 AT3G30842 27.091 550 337 19 28 522 160 700 2.39e-39 155
MS.gene065171.t1 AT2G29940 27.818 550 367 13 1 531 826 1364 4.88e-51 190
MS.gene065171.t1 AT2G29940 27.273 550 339 14 28 524 174 715 9.47e-45 171
MS.gene065171.t1 AT1G66950 25.829 573 383 13 1 548 853 1408 5.36e-51 190
MS.gene065171.t1 AT1G66950 25.000 556 339 17 29 522 190 729 2.81e-37 149
MS.gene065171.t1 AT4G25750 26.894 528 338 12 29 547 30 518 3.52e-49 180
MS.gene065171.t1 AT5G60740 43.600 250 138 3 21 267 507 756 9.17e-48 180
MS.gene065171.t1 AT1G15520 37.453 267 151 6 3 254 827 1092 8.39e-44 168
MS.gene065171.t1 AT1G15520 27.051 573 358 17 28 546 168 734 6.82e-43 166
MS.gene065171.t1 AT5G61730 32.461 191 102 9 30 209 539 713 2.34e-16 83.6
MS.gene065171.t1 AT5G61730 32.461 191 102 9 30 209 549 723 2.73e-16 83.2
MS.gene065171.t1 AT5G58270 30.909 220 134 8 26 238 491 699 7.23e-16 81.6
MS.gene065171.t1 AT5G61690 31.746 189 105 9 30 209 548 721 3.87e-15 79.7
MS.gene065171.t1 AT3G47730 30.688 189 108 7 30 209 547 721 4.71e-15 79.3
MS.gene065171.t1 AT4G28620 29.767 215 135 7 26 234 451 655 5.38e-15 79.0
MS.gene065171.t1 AT5G61690 30.366 191 106 9 30 209 548 722 1.11e-14 78.2
MS.gene065171.t1 AT5G39040 30.928 194 115 8 29 213 413 596 1.63e-14 77.4
MS.gene065171.t1 AT3G28380 31.443 194 119 7 26 213 373 558 3.08e-14 77.0
MS.gene065171.t1 AT3G28380 27.103 214 136 8 37 241 1020 1222 8.19e-12 68.9
MS.gene065171.t1 AT4G28630 28.372 215 138 7 26 234 449 653 7.48e-14 75.1
MS.gene065171.t1 AT3G28345 29.108 213 135 8 37 243 384 586 9.51e-14 75.1
MS.gene065171.t1 AT3G28345 30.052 193 119 8 29 213 1012 1196 8.62e-12 68.9
MS.gene065171.t1 AT3G28390 28.169 213 137 8 37 243 372 574 1.69e-13 74.3
MS.gene065171.t1 AT3G28390 29.048 210 129 10 37 237 1005 1203 3.73e-12 70.1
MS.gene065171.t1 AT4G25960 24.444 270 185 10 37 300 426 682 2.43e-13 73.9
MS.gene065171.t1 AT4G25960 29.348 184 116 7 36 213 1054 1229 1.24e-11 68.6
MS.gene065171.t1 AT5G61700 30.526 190 113 7 27 209 613 790 3.67e-13 73.2
MS.gene065171.t1 AT3G62150 27.650 217 145 8 26 238 417 625 3.92e-13 73.2
MS.gene065171.t1 AT3G62150 29.508 183 116 6 37 213 1077 1252 3.17e-12 70.5
MS.gene065171.t1 AT3G62150 27.650 217 145 8 26 238 417 625 3.92e-13 73.2
MS.gene065171.t1 AT3G62150 29.508 183 116 6 37 213 1077 1252 3.17e-12 70.5
MS.gene065171.t1 AT3G62150 27.650 217 145 8 26 238 417 625 3.92e-13 73.2
MS.gene065171.t1 AT3G62150 29.508 183 116 6 37 213 1077 1252 3.17e-12 70.5
MS.gene065171.t1 AT3G28415 28.302 212 136 8 37 242 371 572 8.97e-13 72.0
MS.gene065171.t1 AT3G28415 30.052 193 119 9 29 213 1001 1185 7.56e-12 69.3
MS.gene065171.t1 AT3G28415 28.302 212 136 8 37 242 363 564 9.92e-13 72.0
MS.gene065171.t1 AT3G28415 30.052 193 119 9 29 213 993 1177 8.23e-12 68.9
MS.gene065171.t1 AT5G61700 29.412 187 120 5 27 209 613 791 1.12e-12 71.6
MS.gene065171.t1 AT5G61700 29.412 187 120 5 27 209 613 791 1.12e-12 71.6
MS.gene065171.t1 AT1G10680 29.348 184 116 7 36 213 385 560 1.40e-12 71.6
MS.gene065171.t1 AT1G10680 29.348 184 116 7 36 213 385 560 1.54e-12 71.2
MS.gene065171.t1 AT1G10680 29.688 192 121 7 28 213 998 1181 1.54e-11 68.2
MS.gene065171.t1 AT2G36910 25.237 317 192 12 37 320 393 697 1.67e-12 71.2
MS.gene065171.t1 AT1G28010 25.688 218 150 7 29 242 389 598 3.00e-12 70.5
MS.gene065171.t1 AT2G47000 28.804 184 116 8 37 213 1067 1242 5.67e-12 69.7
MS.gene065171.t1 AT2G47000 26.425 193 130 7 26 213 398 583 1.40e-11 68.2
MS.gene065171.t1 AT2G47000 28.804 184 116 8 37 213 1067 1242 5.67e-12 69.7
MS.gene065171.t1 AT2G47000 26.425 193 130 7 26 213 398 583 1.40e-11 68.2
MS.gene065171.t1 AT2G47000 28.804 184 116 8 37 213 1067 1242 5.67e-12 69.7
MS.gene065171.t1 AT2G47000 26.425 193 130 7 26 213 398 583 1.40e-11 68.2
MS.gene065171.t1 AT2G41700 30.137 146 92 3 40 183 508 645 6.08e-12 69.7
MS.gene065171.t1 AT2G41700 29.442 197 107 10 27 209 1429 1607 8.44e-11 65.9
MS.gene065171.t1 AT2G41700 30.137 146 92 3 40 183 578 715 6.26e-12 69.7
MS.gene065171.t1 AT2G41700 29.442 197 107 10 27 209 1471 1649 9.46e-11 65.9
MS.gene065171.t1 AT4G25450 28.509 228 133 11 29 242 318 529 6.57e-12 68.6
MS.gene065171.t1 AT3G28360 25.168 298 179 13 37 301 371 657 7.31e-12 69.3
MS.gene065171.t1 AT3G28360 28.415 183 119 6 37 213 1006 1182 1.47e-11 68.2
MS.gene065171.t1 AT2G47000 26.425 193 130 7 26 213 398 583 7.34e-12 69.3
MS.gene065171.t1 AT4G25450 28.070 228 134 11 29 242 487 698 8.08e-12 68.6
MS.gene065171.t1 AT2G47000 26.425 193 130 7 26 213 398 583 9.82e-12 68.6
MS.gene065171.t1 AT2G47000 26.425 193 130 7 26 213 398 583 9.82e-12 68.6
MS.gene065171.t1 AT2G47000 26.425 193 130 7 26 213 398 583 1.00e-11 68.6
MS.gene065171.t1 AT1G02520 26.126 222 148 8 26 238 395 609 1.02e-11 68.6
MS.gene065171.t1 AT1G02520 26.126 222 148 8 26 238 395 609 1.02e-11 68.6
MS.gene065171.t1 AT1G02520 26.126 222 148 8 26 238 395 609 1.02e-11 68.6
MS.gene065171.t1 AT1G27940 27.602 221 144 6 26 240 1018 1228 1.92e-11 67.8
MS.gene065171.t1 AT1G27940 25.234 214 148 7 29 238 388 593 6.72e-11 66.2
MS.gene065171.t1 AT1G27940 27.602 221 144 6 26 240 804 1014 2.23e-11 67.4
MS.gene065171.t1 AT1G27940 25.234 214 148 7 29 238 174 379 7.88e-11 65.9
MS.gene065171.t1 AT1G70610 24.554 224 148 8 25 238 287 499 2.36e-11 67.0
MS.gene065171.t1 AT1G65410 27.119 236 132 9 26 234 96 318 2.46e-11 65.9
MS.gene065171.t1 AT5G46540 30.220 182 108 9 37 209 1030 1201 2.80e-11 67.4
MS.gene065171.t1 AT5G46540 28.111 217 144 7 29 241 374 582 6.33e-11 66.2
MS.gene065171.t1 AT1G70610 24.554 224 148 8 25 238 468 680 4.66e-11 66.2
MS.gene065171.t1 AT3G47790 25.926 189 125 6 26 209 603 781 6.43e-11 65.9
MS.gene065171.t1 AT4G18050 28.723 188 120 7 29 210 372 551 8.39e-11 65.9
MS.gene065171.t1 AT4G18050 28.723 188 120 7 29 210 382 561 9.08e-11 65.9

Find 101 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACCCATGCTATAAATTT+TGG 0.102091 2.4:+17798793 None:intergenic
TATACATATCAGCTATTTAT+TGG 0.160558 2.4:-17798751 MS.gene065171:CDS
AAGAGACAGGTTCTGGAAAA+TGG 0.172889 2.4:-17800141 MS.gene065171:CDS
GAATCCTTCTGATTTCCTTT+TGG 0.221177 2.4:-17800908 MS.gene065171:CDS
AGACTTGGTGGAAAACTTTA+TGG 0.239456 2.4:-17801483 MS.gene065171:CDS
TATTCTTCGTAACAGGCTTT+TGG 0.243287 2.4:-17799182 MS.gene065171:CDS
GCTCTTGTTATAATGCTAAT+TGG 0.250132 2.4:-17798610 MS.gene065171:CDS
ATCTGATATGTCACACTTGC+AGG 0.270169 2.4:-17799984 MS.gene065171:CDS
TTTCTGGTGGAGAAAGAAAA+AGG 0.275533 2.4:-17801215 MS.gene065171:CDS
GGCCTACTATTCTTCGTAAC+AGG 0.302240 2.4:-17799189 MS.gene065171:CDS
TCATTGATTTCTCGATGTTC+TGG 0.302997 2.4:+17800190 None:intergenic
TTTCTTGATGAACCAACTTC+TGG 0.303646 2.4:-17801150 MS.gene065171:CDS
CCTTCTCATAACATATTTCA+TGG 0.304506 2.4:-17799004 MS.gene065171:CDS
GCATATCTAAGAGGTGTTTC+TGG 0.309677 2.4:-17801231 MS.gene065171:CDS
ATGCTATGTTTCTTACTTGC+TGG 0.310276 2.4:-17798838 MS.gene065171:CDS
GAAGAGAAAACAATACTAAA+AGG 0.310495 2.4:-17801597 MS.gene065171:CDS
GATTGGAGTCACAAAGAAAT+TGG 0.313433 2.4:-17798554 MS.gene065171:CDS
TGATGAACCAACTTCTGGTT+TGG 0.340537 2.4:-17801145 MS.gene065171:CDS
AGATTTCAAGAGACAGGTTC+TGG 0.356659 2.4:-17800148 MS.gene065171:CDS
ACAATACTAAAAGGAGTAAC+AGG 0.358445 2.4:-17801588 MS.gene065171:CDS
ACAACATTATTAACAGCATT+AGG 0.368425 2.4:-17801510 MS.gene065171:CDS
ATACATATCAGCTATTTATT+GGG 0.374840 2.4:-17798750 MS.gene065171:CDS
TAGCTTATTGTGCTCTTATG+AGG 0.392262 2.4:-17798576 MS.gene065171:CDS
TGTTCTTTACCCTCACTTAA+CGG 0.399869 2.4:-17801388 MS.gene065171:CDS
GTGAAGATTGCTTGAAAGAG+TGG 0.408276 2.4:+17799150 None:intergenic
AAGAATTGTGTCAACTTTGT+GGG 0.416258 2.4:-17801106 MS.gene065171:CDS
TATTGTGCTCTTATGAGGAT+TGG 0.418246 2.4:-17798571 MS.gene065171:CDS
AAAGAATTGTGTCAACTTTG+TGG 0.419410 2.4:-17801107 MS.gene065171:CDS
GTTTCCACCTATAAAACAAA+TGG 0.420328 2.4:-17798668 MS.gene065171:CDS
AAGTGCAAAGATAGCATTGT+TGG 0.429579 2.4:-17801258 MS.gene065171:CDS
TGCTGTGAAAACAAGTGTTT+CGG 0.432217 2.4:+17801362 None:intergenic
GGTGAAATGCTAGCAATGTT+AGG 0.432970 2.4:-17801552 MS.gene065171:CDS
AGAAAATATGAATCATTCTC+TGG 0.435727 2.4:-17800064 MS.gene065171:CDS
TTTCCACCTATAAAACAAAT+GGG 0.437865 2.4:-17798667 MS.gene065171:CDS
CAATGACTCTGATACAAGTC+AGG 0.438566 2.4:-17800173 MS.gene065171:CDS
GGGATTGATTTGAATGGTCT+AGG 0.439815 2.4:-17798646 MS.gene065171:CDS
CTAGCAATGTTAGGTCCATC+TGG 0.439994 2.4:-17801543 MS.gene065171:CDS
CTTGTGGTTGCACTTATGTC+AGG 0.443194 2.4:-17800022 MS.gene065171:CDS
CTCTGGCTTGAGGATTGCTC+AGG 0.449659 2.4:-17800047 MS.gene065171:CDS
ATATAATATAATCTACTAGA+AGG 0.452725 2.4:+17801039 None:intergenic
TTGCTAGCATTTCACCTGGT+TGG 0.453423 2.4:+17801559 None:intergenic
CAGGGTAGATTTCAAGAGAC+AGG 0.459585 2.4:-17800154 MS.gene065171:CDS
GATTTCTCGATGTTCTGGCT+TGG 0.462870 2.4:+17800195 None:intergenic
AGAGACAGGTTCTGGAAAAT+GGG 0.465394 2.4:-17800140 MS.gene065171:CDS
CAAGCATCATTAGTTCTTGA+GGG 0.466009 2.4:+17799124 None:intergenic
CTATGTTTCTTACTTGCTGG+TGG 0.467399 2.4:-17798835 MS.gene065171:CDS
CTCATATTTCATTTCACGAA+TGG 0.467598 2.4:-17799067 MS.gene065171:CDS
CACTTATGTCAGGACTACTT+TGG 0.467863 2.4:-17800012 MS.gene065171:CDS
ACACTAACACATTGAGTAAG+AGG 0.469104 2.4:+17798935 None:intergenic
CTCATAACATATTTCATGGC+AGG 0.470165 2.4:-17799000 MS.gene065171:CDS
TATGTCACACTTGCAGGATC+AGG 0.479738 2.4:-17799978 MS.gene065171:intron
TGGTCTAGGATTGGCTGCAT+TGG 0.484604 2.4:-17798632 MS.gene065171:CDS
TCAAGCATCATTAGTTCTTG+AGG 0.507749 2.4:+17799123 None:intergenic
TGATTTGAATGGTCTAGGAT+TGG 0.509093 2.4:-17798641 MS.gene065171:CDS
CTGGAAAATGGGCAACAAGC+TGG 0.509542 2.4:-17800129 MS.gene065171:CDS
TGTTATGAGAAGGAAAATTG+TGG 0.522718 2.4:+17799014 None:intergenic
GTTATGAGAAGGAAAATTGT+GGG 0.526657 2.4:+17799015 None:intergenic
ATGTTCCAAAATTTATAGCA+TGG 0.528958 2.4:-17798798 MS.gene065171:CDS
TGTTCCAAAATTTATAGCAT+GGG 0.531180 2.4:-17798797 MS.gene065171:CDS
AGCCTGTTACGAAGAATAGT+AGG 0.537206 2.4:+17799187 None:intergenic
GATACATACCCTTGTTCTAG+TGG 0.539886 2.4:-17798709 MS.gene065171:CDS
CAAATGGGGATTGATTTGAA+TGG 0.540553 2.4:-17798652 MS.gene065171:CDS
CATTCGTGAAATGAAATATG+AGG 0.540883 2.4:+17799068 None:intergenic
TACCATTTGCAAGATCCAAA+AGG 0.543311 2.4:+17800893 None:intergenic
GCATTAGGAGGAAGACTTGG+TGG 0.545011 2.4:-17801495 MS.gene065171:CDS
GAAGGATTCATAGCCATAGC+AGG 0.545982 2.4:+17800922 None:intergenic
TATTGGTTATGCTCCTGCTA+TGG 0.546978 2.4:-17800935 MS.gene065171:CDS
GACACTGTCCACTAGAACAA+GGG 0.547896 2.4:+17798701 None:intergenic
GTGGGAAGGACTAGTTCCAT+TGG 0.548536 2.4:+17799033 None:intergenic
ATGAATCATTCTCTGGCTTG+AGG 0.549126 2.4:-17800057 MS.gene065171:CDS
GAGGATTGCTCAGGTCCTTG+TGG 0.551279 2.4:-17800038 MS.gene065171:CDS
TCATCAAGAAACAATAAACT+AGG 0.557336 2.4:+17801162 None:intergenic
GTAGAATCCAAACCAGAAGT+TGG 0.565298 2.4:+17801138 None:intergenic
CTCAATGTGTTAGTGTCACA+AGG 0.567926 2.4:-17798928 MS.gene065171:CDS
ATGTTAGGTCCATCTGGAAG+TGG 0.568067 2.4:-17801537 MS.gene065171:CDS
GTGTTAGTGTCACAAGGACT+AGG 0.569305 2.4:-17798922 MS.gene065171:CDS
TGAAGATTGCTTGAAAGAGT+GGG 0.574248 2.4:+17799151 None:intergenic
GTTGGAAGTGCATATCTAAG+AGG 0.574415 2.4:-17801240 MS.gene065171:CDS
ATTGGGTCACAGTATCATAG+TGG 0.576483 2.4:-17798733 MS.gene065171:CDS
TTGTGGGATTTAGCAAGAGG+TGG 0.579967 2.4:-17801090 MS.gene065171:CDS
CCATGAAATATGTTATGAGA+AGG 0.580904 2.4:+17799004 None:intergenic
GGGATTTAGCAAGAGGTGGA+AGG 0.584167 2.4:-17801086 MS.gene065171:CDS
ACAGCATTAGGAGGAAGACT+TGG 0.589397 2.4:-17801498 MS.gene065171:CDS
GTTTCGGTTACCGTTAAGTG+AGG 0.592338 2.4:+17801378 None:intergenic
ACTTTGTGGGATTTAGCAAG+AGG 0.596730 2.4:-17801093 MS.gene065171:CDS
AGATCCAAAAGGAAATCAGA+AGG 0.608223 2.4:+17800904 None:intergenic
CAAGGACTAGGACTTGCACT+TGG 0.612193 2.4:-17798910 MS.gene065171:CDS
AATGGTCGCTGACCTACCAA+TGG 0.618230 2.4:-17799049 MS.gene065171:CDS
AACATTGCTAGCATTTCACC+TGG 0.622230 2.4:+17801555 None:intergenic
TGAGAAGGAAAATTGTGGGA+AGG 0.622325 2.4:+17799019 None:intergenic
TATCTAAGAGGTGTTTCTGG+TGG 0.622598 2.4:-17801228 MS.gene065171:CDS
AGACACTGTCCACTAGAACA+AGG 0.627726 2.4:+17798700 None:intergenic
AAGAATGTGATAGATCAACT+TGG 0.634975 2.4:-17801288 MS.gene065171:CDS
ACATTATTAACAGCATTAGG+AGG 0.635782 2.4:-17801507 MS.gene065171:CDS
TTTCGGTTACCGTTAAGTGA+GGG 0.645694 2.4:+17801379 None:intergenic
TTCCACCTATAAAACAAATG+GGG 0.648891 2.4:-17798666 MS.gene065171:CDS
CTGACATAAGTGCAACCACA+AGG 0.663885 2.4:+17800023 None:intergenic
GAAGGACTAGTTCCATTGGT+AGG 0.669567 2.4:+17799037 None:intergenic
GGAGAGTCTGTACATTCCTG+AGG 0.674161 2.4:+17799089 None:intergenic
AATGACTCTGATACAAGTCA+GGG 0.676130 2.4:-17800172 MS.gene065171:CDS
GTAACAGGAATTGTCCAACC+AGG 0.689023 2.4:-17801573 MS.gene065171:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GACATTTTTTAATTTATTTA+AGG - chr2.4:17799716-17799735 MS.gene065171:intron 10.0%
!! ATATAATATAATCTACTAGA+AGG + chr2.4:17799182-17799201 None:intergenic 15.0%
!! TTTACTAGAGATATTAATTA+TGG - chr2.4:17799676-17799695 MS.gene065171:intron 15.0%
!!! ATTGAACATTTTTCTAATAT+TGG - chr2.4:17799266-17799285 MS.gene065171:intron 15.0%
!!! CTTTTTATAACATTTGAAAA+AGG + chr2.4:17798783-17798802 None:intergenic 15.0%
!!! TAATTTTTGTTAATCTGAAA+TGG + chr2.4:17800301-17800320 None:intergenic 15.0%
!! AATGTTATAAAAAGAAACAC+AGG - chr2.4:17798789-17798808 MS.gene065171:CDS 20.0%
!! ATAAATATTGCAATGAAATG+AGG - chr2.4:17800448-17800467 MS.gene065171:intron 20.0%
!! ATACATATCAGCTATTTATT+GGG - chr2.4:17801468-17801487 MS.gene065171:CDS 20.0%
!! ATCAATAGTCATACTATATT+TGG + chr2.4:17799376-17799395 None:intergenic 20.0%
!! TAACTTGGATTTAAATACTA+TGG + chr2.4:17800801-17800820 None:intergenic 20.0%
!! TATACATATCAGCTATTTAT+TGG - chr2.4:17801467-17801486 MS.gene065171:CDS 20.0%
!! TGACATATGATATCTATAAT+AGG + chr2.4:17799456-17799475 None:intergenic 20.0%
!! TTAACACAAGATATATCATA+AGG + chr2.4:17799838-17799857 None:intergenic 20.0%
!!! AATGTTTTGTATTTTGGAAA+AGG - chr2.4:17799233-17799252 MS.gene065171:intron 20.0%
!!! ATGCTATTTCATATATTTGA+GGG - chr2.4:17799746-17799765 MS.gene065171:intron 20.0%
!!! ATGTTTTGTATTTTGGAAAA+GGG - chr2.4:17799234-17799253 MS.gene065171:intron 20.0%
!!! TATGCTATTTCATATATTTG+AGG - chr2.4:17799745-17799764 MS.gene065171:intron 20.0%
!!! TTTATTTTTTTGAACTGTGA+TGG - chr2.4:17800954-17800973 MS.gene065171:CDS 20.0%
! AAACAATTTCAACCATGATT+TGG - chr2.4:17800565-17800584 MS.gene065171:intron 25.0%
! AACAATTTCAACCATGATTT+GGG - chr2.4:17800566-17800585 MS.gene065171:intron 25.0%
! ACAACATTATTAACAGCATT+AGG - chr2.4:17798708-17798727 MS.gene065171:CDS 25.0%
! ACGATGTTTATAATGAAGTT+CGG + chr2.4:17800912-17800931 None:intergenic 25.0%
! ACTAGAGATATTAATTATGG+TGG - chr2.4:17799679-17799698 MS.gene065171:intron 25.0%
! AGAAAATATGAATCATTCTC+TGG - chr2.4:17800154-17800173 MS.gene065171:CDS 25.0%
! AGTATTAGTAACTGATAAGT+GGG - chr2.4:17800744-17800763 MS.gene065171:intron 25.0%
! AGTCTTAGAAGAAATTGTAA+GGG - chr2.4:17799516-17799535 MS.gene065171:intron 25.0%
! AGTTTGACTAAACTAATTGT+TGG - chr2.4:17800710-17800729 MS.gene065171:intron 25.0%
! ATGTTCCAAAATTTATAGCA+TGG - chr2.4:17801420-17801439 MS.gene065171:CDS 25.0%
! ATTTCGTTCTCAAAATTGTA+AGG + chr2.4:17799787-17799806 None:intergenic 25.0%
! CTAGAGATATTAATTATGGT+GGG - chr2.4:17799680-17799699 MS.gene065171:intron 25.0%
! GAAGAGAAAACAATACTAAA+AGG - chr2.4:17798621-17798640 MS.gene065171:CDS 25.0%
! GTTTGACTAAACTAATTGTT+GGG - chr2.4:17800711-17800730 MS.gene065171:intron 25.0%
! TAACAAGAATGTACTAATGT+TGG - chr2.4:17800356-17800375 MS.gene065171:intron 25.0%
! TACAAAATCAAAGCCAAAAA+AGG - chr2.4:17798570-17798589 MS.gene065171:CDS 25.0%
! TAGAGATATTAATTATGGTG+GGG - chr2.4:17799681-17799700 MS.gene065171:intron 25.0%
! TAGTATTAGTAACTGATAAG+TGG - chr2.4:17800743-17800762 MS.gene065171:intron 25.0%
! TCATCAAGAAACAATAAACT+AGG + chr2.4:17799059-17799078 None:intergenic 25.0%
! TGTTCCAAAATTTATAGCAT+GGG - chr2.4:17801421-17801440 MS.gene065171:CDS 25.0%
! TTTCCACCTATAAAACAAAT+GGG - chr2.4:17801551-17801570 MS.gene065171:CDS 25.0%
! TTTCGTTCTCAAAATTGTAA+GGG + chr2.4:17799786-17799805 None:intergenic 25.0%
!! AGGTTTTTCATTGTATGTTA+TGG + chr2.4:17798763-17798782 None:intergenic 25.0%
!! TAGTCTTAGAAGAAATTGTA+AGG - chr2.4:17799515-17799534 MS.gene065171:intron 25.0%
!!! GTTTTTGTTTGTCTATTGTA+TGG + chr2.4:17799967-17799986 None:intergenic 25.0%
AAAATCAAAGCCAAAAAAGG+AGG - chr2.4:17798573-17798592 MS.gene065171:CDS 30.0%
AAAGAATTGTGTCAACTTTG+TGG - chr2.4:17799111-17799130 MS.gene065171:CDS 30.0%
AACTTTCACCGATAATAGAA+AGG - chr2.4:17800837-17800856 MS.gene065171:intron 30.0%
AAGAATGTGATAGATCAACT+TGG - chr2.4:17798930-17798949 MS.gene065171:CDS 30.0%
AAGAATTGTGTCAACTTTGT+GGG - chr2.4:17799112-17799131 MS.gene065171:CDS 30.0%
ACAATACTAAAAGGAGTAAC+AGG - chr2.4:17798630-17798649 MS.gene065171:CDS 30.0%
ACATTATTAACAGCATTAGG+AGG - chr2.4:17798711-17798730 MS.gene065171:CDS 30.0%
ACCATCAAAATCAATGAAAG+CGG + chr2.4:17799654-17799673 None:intergenic 30.0%
CATTCGTGAAATGAAATATG+AGG + chr2.4:17801153-17801172 None:intergenic 30.0%
CCATGAAATATGTTATGAGA+AGG + chr2.4:17801217-17801236 None:intergenic 30.0%
CCTTCTCATAACATATTTCA+TGG - chr2.4:17801214-17801233 MS.gene065171:CDS 30.0%
CGATGTTTATAATGAAGTTC+GGG + chr2.4:17800911-17800930 None:intergenic 30.0%
CTATTATCGGTGAAAGTTTA+GGG + chr2.4:17800835-17800854 None:intergenic 30.0%
CTCATATTTCATTTCACGAA+TGG - chr2.4:17801151-17801170 MS.gene065171:CDS 30.0%
CTCATTTACTCAAGTTTAGA+TGG - chr2.4:17799808-17799827 MS.gene065171:intron 30.0%
GTTATGAGAAGGAAAATTGT+GGG + chr2.4:17801206-17801225 None:intergenic 30.0%
GTTTCCACCTATAAAACAAA+TGG - chr2.4:17801550-17801569 MS.gene065171:CDS 30.0%
TCTATTATCGGTGAAAGTTT+AGG + chr2.4:17800836-17800855 None:intergenic 30.0%
TGTTATGAGAAGGAAAATTG+TGG + chr2.4:17801207-17801226 None:intergenic 30.0%
TTAGAAGAAATTGTAAGGGT+CGG - chr2.4:17799520-17799539 MS.gene065171:intron 30.0%
TTCCACCTATAAAACAAATG+GGG - chr2.4:17801552-17801571 MS.gene065171:CDS 30.0%
! ATTTAGCACCACAATTTTGA+AGG - chr2.4:17799580-17799599 MS.gene065171:intron 30.0%
! GAAAGAAAAAGGGTTAGTAT+TGG - chr2.4:17799014-17799033 MS.gene065171:CDS 30.0%
! GCTCTTGTTATAATGCTAAT+TGG - chr2.4:17801608-17801627 MS.gene065171:CDS 30.0%
! TCTTCTTTTGTGACACTATT+TGG + chr2.4:17798894-17798913 None:intergenic 30.0%
! TTCACCCATGCTATAAATTT+TGG + chr2.4:17801428-17801447 None:intergenic 30.0%
!! TCAAACTAGATTTTGAGTCA+CGG + chr2.4:17800697-17800716 None:intergenic 30.0%
!!! CTTAAATAGTCCTCCTTTTT+TGG + chr2.4:17798586-17798605 None:intergenic 30.0%
!!! TCAATCCCCATTTGTTTTAT+AGG + chr2.4:17801560-17801579 None:intergenic 30.0%
AAGATCCATGATCATGATCT+AGG + chr2.4:17800527-17800546 None:intergenic 35.0%
AAGTGCAAAGATAGCATTGT+TGG - chr2.4:17798960-17798979 MS.gene065171:CDS 35.0%
AATGACTCTGATACAAGTCA+GGG - chr2.4:17800046-17800065 MS.gene065171:CDS 35.0%
ACACTAACACATTGAGTAAG+AGG + chr2.4:17801286-17801305 None:intergenic 35.0%
AGATCCAAAAGGAAATCAGA+AGG + chr2.4:17799317-17799336 None:intergenic 35.0%
AGCTAAGTGAGAAAATTTGC+AGG - chr2.4:17799914-17799933 MS.gene065171:intron 35.0%
AGGGTTTACAGTGTATAACT+TGG + chr2.4:17800816-17800835 None:intergenic 35.0%
ATGCTATGTTTCTTACTTGC+TGG - chr2.4:17801380-17801399 MS.gene065171:CDS 35.0%
CTCATAACATATTTCATGGC+AGG - chr2.4:17801218-17801237 MS.gene065171:CDS 35.0%
CTGCAGTTCCTTTCTATTAT+CGG + chr2.4:17800848-17800867 None:intergenic 35.0%
CTTGAAAAAGAAAGATCCTC+AGG - chr2.4:17801113-17801132 MS.gene065171:CDS 35.0%
GAGTGAGTTTAAATTGCAGT+TGG - chr2.4:17800415-17800434 MS.gene065171:intron 35.0%
GATTGGAGTCACAAAGAAAT+TGG - chr2.4:17801664-17801683 MS.gene065171:CDS 35.0%
GCATAGAACCTTCAAAATTG+TGG + chr2.4:17799591-17799610 None:intergenic 35.0%
GTTTAAATTGCAGTTGGAGT+TGG - chr2.4:17800421-17800440 MS.gene065171:intron 35.0%
TACCATTTGCAAGATCCAAA+AGG + chr2.4:17799328-17799347 None:intergenic 35.0%
TAGCTTATTGTGCTCTTATG+AGG - chr2.4:17801642-17801661 MS.gene065171:CDS 35.0%
TATTGTGCTCTTATGAGGAT+TGG - chr2.4:17801647-17801666 MS.gene065171:CDS 35.0%
TGAAGATTGCTTGAAAGAGT+GGG + chr2.4:17801070-17801089 None:intergenic 35.0%
TGCTGTGAAAACAAGTGTTT+CGG + chr2.4:17798859-17798878 None:intergenic 35.0%
TGTTCTTTACCCTCACTTAA+CGG - chr2.4:17798830-17798849 MS.gene065171:CDS 35.0%
TTAGTAACTGATAAGTGGGA+AGG - chr2.4:17800748-17800767 MS.gene065171:intron 35.0%
TTCTGGTGGAGAAAGAAAAA+GGG - chr2.4:17799004-17799023 MS.gene065171:CDS 35.0%
TTTCTTGATGAACCAACTTC+TGG - chr2.4:17799068-17799087 MS.gene065171:CDS 35.0%
! ATTCTTCGTAACAGGCTTTT+GGG - chr2.4:17801037-17801056 MS.gene065171:CDS 35.0%
! CAAGCATCATTAGTTCTTGA+GGG + chr2.4:17801097-17801116 None:intergenic 35.0%
! GAATCCTTCTGATTTCCTTT+TGG - chr2.4:17799310-17799329 MS.gene065171:intron 35.0%
! GAGGGGAATGTTTTGTATTT+TGG - chr2.4:17799227-17799246 MS.gene065171:intron 35.0%
! GTGGTGCTAAATTCAGAAAA+AGG + chr2.4:17799572-17799591 None:intergenic 35.0%
! TATTCTTCGTAACAGGCTTT+TGG - chr2.4:17801036-17801055 MS.gene065171:CDS 35.0%
! TCAAGCATCATTAGTTCTTG+AGG + chr2.4:17801098-17801117 None:intergenic 35.0%
! TGATTTGAATGGTCTAGGAT+TGG - chr2.4:17801577-17801596 MS.gene065171:CDS 35.0%
! TTCCTTTTGGATCTTGCAAA+TGG - chr2.4:17799323-17799342 MS.gene065171:intron 35.0%
! TTTCTGGTGGAGAAAGAAAA+AGG - chr2.4:17799003-17799022 MS.gene065171:CDS 35.0%
!! AGACTTGGTGGAAAACTTTA+TGG - chr2.4:17798735-17798754 MS.gene065171:CDS 35.0%
!! CAAATGGGGATTGATTTGAA+TGG - chr2.4:17801566-17801585 MS.gene065171:CDS 35.0%
!! TCATTGATTTCTCGATGTTC+TGG + chr2.4:17800031-17800050 None:intergenic 35.0%
!!! AAAGTTTTGTTGCTTGCTGA+GGG - chr2.4:17799209-17799228 MS.gene065171:intron 35.0%
!!! ACCGCTTTCATTGATTTTGA+TGG - chr2.4:17799650-17799669 MS.gene065171:intron 35.0%
!!! ATCCCCATTTGTTTTATAGG+TGG + chr2.4:17801557-17801576 None:intergenic 35.0%
!!! TAAAGTTTTGTTGCTTGCTG+AGG - chr2.4:17799208-17799227 MS.gene065171:intron 35.0%
AACATTGCTAGCATTTCACC+TGG + chr2.4:17798666-17798685 None:intergenic 40.0%
AACGACCTAGATCATGATCA+TGG - chr2.4:17800519-17800538 MS.gene065171:intron 40.0%
ACTTTGTGGGATTTAGCAAG+AGG - chr2.4:17799125-17799144 MS.gene065171:CDS 40.0%
AGATTTCAAGAGACAGGTTC+TGG - chr2.4:17800070-17800089 MS.gene065171:CDS 40.0%
AGCCTGTTACGAAGAATAGT+AGG + chr2.4:17801034-17801053 None:intergenic 40.0%
AGTCAGAGTCTCATAGATGT+AGG - chr2.4:17800877-17800896 MS.gene065171:intron 40.0%
ATCTGATATGTCACACTTGC+AGG - chr2.4:17800234-17800253 MS.gene065171:CDS 40.0%
ATGTAAATACTTCGCACACG+CGG + chr2.4:17800774-17800793 None:intergenic 40.0%
ATTGGGTCACAGTATCATAG+TGG - chr2.4:17801485-17801504 MS.gene065171:CDS 40.0%
CAATGACTCTGATACAAGTC+AGG - chr2.4:17800045-17800064 MS.gene065171:CDS 40.0%
CACTTATGTCAGGACTACTT+TGG - chr2.4:17800206-17800225 MS.gene065171:CDS 40.0%
CTCAATGTGTTAGTGTCACA+AGG - chr2.4:17801290-17801309 MS.gene065171:CDS 40.0%
GATACATACCCTTGTTCTAG+TGG - chr2.4:17801509-17801528 MS.gene065171:CDS 40.0%
GCAATGAAATGAGGCTGAAA+CGG - chr2.4:17800457-17800476 MS.gene065171:intron 40.0%
GGTGAAATGCTAGCAATGTT+AGG - chr2.4:17798666-17798685 MS.gene065171:CDS 40.0%
GTAGAATCCAAACCAGAAGT+TGG + chr2.4:17799083-17799102 None:intergenic 40.0%
GTGAAGATTGCTTGAAAGAG+TGG + chr2.4:17801071-17801090 None:intergenic 40.0%
TCTCAACTTTCCTTGCAGAT+TGG - chr2.4:17801008-17801027 MS.gene065171:CDS 40.0%
TCTCACTTAGCTAAGCAACA+AGG + chr2.4:17799906-17799925 None:intergenic 40.0%
TGAGAAGGAAAATTGTGGGA+AGG + chr2.4:17801202-17801221 None:intergenic 40.0%
TTTCGGTTACCGTTAAGTGA+GGG + chr2.4:17798842-17798861 None:intergenic 40.0%
! ATGAATCATTCTCTGGCTTG+AGG - chr2.4:17800161-17800180 MS.gene065171:CDS 40.0%
! CTATGTTTCTTACTTGCTGG+TGG - chr2.4:17801383-17801402 MS.gene065171:CDS 40.0%
! GTTGGAAGTGCATATCTAAG+AGG - chr2.4:17798978-17798997 MS.gene065171:CDS 40.0%
! TATTGGTTATGCTCCTGCTA+TGG - chr2.4:17799283-17799302 MS.gene065171:intron 40.0%
! TGATGAACCAACTTCTGGTT+TGG - chr2.4:17799073-17799092 MS.gene065171:CDS 40.0%
! TTCTTCGTAACAGGCTTTTG+GGG - chr2.4:17801038-17801057 MS.gene065171:CDS 40.0%
!! AAGAGACAGGTTCTGGAAAA+TGG - chr2.4:17800077-17800096 MS.gene065171:CDS 40.0%
!! AGAGACAGGTTCTGGAAAAT+GGG - chr2.4:17800078-17800097 MS.gene065171:CDS 40.0%
!! ATGATCTAGGTCGTTTTCTC+AGG + chr2.4:17800514-17800533 None:intergenic 40.0%
!! GCATATCTAAGAGGTGTTTC+TGG - chr2.4:17798987-17799006 MS.gene065171:CDS 40.0%
!! GGGATTGATTTGAATGGTCT+AGG - chr2.4:17801572-17801591 MS.gene065171:CDS 40.0%
!! TATCTAAGAGGTGTTTCTGG+TGG - chr2.4:17798990-17799009 MS.gene065171:CDS 40.0%
!! TGATCTAGGTCGTTTTCTCA+GGG + chr2.4:17800513-17800532 None:intergenic 40.0%
!!! AAGTTTTGTTGCTTGCTGAG+GGG - chr2.4:17799210-17799229 MS.gene065171:intron 40.0%
ACAGCATTAGGAGGAAGACT+TGG - chr2.4:17798720-17798739 MS.gene065171:CDS 45.0%
ACTTTGATTGCACTCGCATC+AGG - chr2.4:17800620-17800639 MS.gene065171:intron 45.0%
AGACACTGTCCACTAGAACA+AGG + chr2.4:17801521-17801540 None:intergenic 45.0%
ATGTTAGGTCCATCTGGAAG+TGG - chr2.4:17798681-17798700 MS.gene065171:CDS 45.0%
CAGGGTAGATTTCAAGAGAC+AGG - chr2.4:17800064-17800083 MS.gene065171:CDS 45.0%
CATCAAAAACCTTGATGCCG+CGG + chr2.4:17800592-17800611 None:intergenic 45.0%
CTAGCAATGTTAGGTCCATC+TGG - chr2.4:17798675-17798694 MS.gene065171:CDS 45.0%
CTGACATAAGTGCAACCACA+AGG + chr2.4:17800198-17800217 None:intergenic 45.0%
CTTGTGGTTGCACTTATGTC+AGG - chr2.4:17800196-17800215 MS.gene065171:CDS 45.0%
GAAAGCGGTACATATTGACG+TGG + chr2.4:17799639-17799658 None:intergenic 45.0%
GAAGGATTCATAGCCATAGC+AGG + chr2.4:17799299-17799318 None:intergenic 45.0%
GAATAGTAGGCCAATCTGCA+AGG + chr2.4:17801021-17801040 None:intergenic 45.0%
GACACTGTCCACTAGAACAA+GGG + chr2.4:17801520-17801539 None:intergenic 45.0%
GATGCGAGTGCAATCAAAGT+CGG + chr2.4:17800620-17800639 None:intergenic 45.0%
GGCCTACTATTCTTCGTAAC+AGG - chr2.4:17801029-17801048 MS.gene065171:CDS 45.0%
GTAACAGGAATTGTCCAACC+AGG - chr2.4:17798645-17798664 MS.gene065171:CDS 45.0%
GTGTTAGTGTCACAAGGACT+AGG - chr2.4:17801296-17801315 MS.gene065171:CDS 45.0%
GTTGGACAGAGAACTAAGTC+AGG - chr2.4:17800374-17800393 MS.gene065171:intron 45.0%
GTTTCGGTTACCGTTAAGTG+AGG + chr2.4:17798843-17798862 None:intergenic 45.0%
TATGTCACACTTGCAGGATC+AGG - chr2.4:17800240-17800259 MS.gene065171:CDS 45.0%
TTGCTAGCATTTCACCTGGT+TGG + chr2.4:17798662-17798681 None:intergenic 45.0%
TTGTGGGATTTAGCAAGAGG+TGG - chr2.4:17799128-17799147 MS.gene065171:CDS 45.0%
! GATTTCTCGATGTTCTGGCT+TGG + chr2.4:17800026-17800045 None:intergenic 45.0%
!! GAAGGACTAGTTCCATTGGT+AGG + chr2.4:17801184-17801203 None:intergenic 45.0%
!! GTTGTTTTGCCACTTCCAGA+TGG + chr2.4:17798693-17798712 None:intergenic 45.0%
!!! ACATTTTTTAATTTATTTAA+GGG - chr2.4:17799717-17799736 MS.gene065171:intron 5.0%
!!! TAAATTTTAAAATAGTAAAT+CGG - chr2.4:17799487-17799506 MS.gene065171:intron 5.0%
AATGGTCGCTGACCTACCAA+TGG - chr2.4:17801169-17801188 MS.gene065171:CDS 50.0%
ATGAGACTCTGACTGCAGAG+CGG + chr2.4:17800871-17800890 None:intergenic 50.0%
CAAGGACTAGGACTTGCACT+TGG - chr2.4:17801308-17801327 MS.gene065171:CDS 50.0%
CTGGAAAATGGGCAACAAGC+TGG - chr2.4:17800089-17800108 MS.gene065171:CDS 50.0%
GCATTAGGAGGAAGACTTGG+TGG - chr2.4:17798723-17798742 MS.gene065171:CDS 50.0%
GGAGAGTCTGTACATTCCTG+AGG + chr2.4:17801132-17801151 None:intergenic 50.0%
GGGATTTAGCAAGAGGTGGA+AGG - chr2.4:17799132-17799151 MS.gene065171:CDS 50.0%
! TTCAACCATGATTTGGGCCG+CGG - chr2.4:17800572-17800591 MS.gene065171:intron 50.0%
!! GTGGGAAGGACTAGTTCCAT+TGG + chr2.4:17801188-17801207 None:intergenic 50.0%
!! TGGTCTAGGATTGGCTGCAT+TGG - chr2.4:17801586-17801605 MS.gene065171:CDS 50.0%
GAGGATTGCTCAGGTCCTTG+TGG - chr2.4:17800180-17800199 MS.gene065171:CDS 55.0%
! CTCTGGCTTGAGGATTGCTC+AGG - chr2.4:17800171-17800190 MS.gene065171:CDS 55.0%
TGATGCCGCGGCCCAAATCA+TGG + chr2.4:17800580-17800599 None:intergenic 60.0%
! TGATTTGGGCCGCGGCATCA+AGG - chr2.4:17800580-17800599 MS.gene065171:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 17798549 17801691 17798549 ID=MS.gene065171
chr2.4 mRNA 17798549 17801691 17798549 ID=MS.gene065171.t1;Parent=MS.gene065171
chr2.4 exon 17800896 17801691 17800896 ID=MS.gene065171.t1.exon1;Parent=MS.gene065171.t1
chr2.4 CDS 17800896 17801691 17800896 ID=cds.MS.gene065171.t1;Parent=MS.gene065171.t1
chr2.4 exon 17799979 17800304 17799979 ID=MS.gene065171.t1.exon2;Parent=MS.gene065171.t1
chr2.4 CDS 17799979 17800304 17799979 ID=cds.MS.gene065171.t1;Parent=MS.gene065171.t1
chr2.4 exon 17798549 17799214 17798549 ID=MS.gene065171.t1.exon3;Parent=MS.gene065171.t1
chr2.4 CDS 17798549 17799214 17798549 ID=cds.MS.gene065171.t1;Parent=MS.gene065171.t1
Gene Sequence

>MS.gene065171

ATGCAGTTTGATGATGTTGTGTACAAAATCAAAGCCAAAAAAGGAGGACTATTTAAGAAGAGCATAGAAGTAGAAGAGAAAACAATACTAAAAGGAGTAACAGGAATTGTCCAACCAGGTGAAATGCTAGCAATGTTAGGTCCATCTGGAAGTGGCAAAACAACATTATTAACAGCATTAGGAGGAAGACTTGGTGGAAAACTTTATGGATCCATAACATACAATGAAAAACCTTTTTCAAATGTTATAAAAAGAAACACAGGTTTTGTCACACAAGATGATGTTCTTTACCCTCACTTAACGGTAACCGAAACACTTGTTTTCACAGCACTACTTAGATTACCAAATAGTGTCACAAAAGAAGAGAAAGTTACTCATGCAAAGAATGTGATAGATCAACTTGGTTTAACAAAGTGCAAAGATAGCATTGTTGGAAGTGCATATCTAAGAGGTGTTTCTGGTGGAGAAAGAAAAAGGGTTAGTATTGGACAAGAATTGCTTATAAATCCTAGTTTATTGTTTCTTGATGAACCAACTTCTGGTTTGGATTCTACTACAGCACAAAGAATTGTGTCAACTTTGTGGGATTTAGCAAGAGGTGGAAGGACTGTTGTGATGACAATACATCAACCTTCTAGTAGATTATATTATATGTTTCATAAAGTTTTGTTGCTTGCTGAGGGGAATGTTTTGTATTTTGGAAAAGGGTCTGAAGCTATTGAACATTTTTCTAATATTGGTTATGCTCCTGCTATGGCTATGAATCCTTCTGATTTCCTTTTGGATCTTGCAAATGGTATGTTTTTTAATTTCTATGCATTTTACCAAATATAGTATGACTATTGATAACGACATAAAACTTAAAGTTCTAGTTTTCATTTTCAATCAAATATTGTGTCTTATACCTATTATAGATATCATATGTCAACTCTACATATTAAATTTTAAAATAGTAAATCGGCATTTTAGTCTTAGAAGAAATTGTAAGGGTCGGTCAATTTTTAACGTCGTCAATGAAATCCTTTTTCTGAATTTAGCACCACAATTTTGAAGGTTCTATGCTTGTCTTTGTACATCAAGAGATTATCCACGTCAATATGTACCGCTTTCATTGATTTTGATGGTTGTTTACTAGAGATATTAATTATGGTGGGGAGACTATTGATTGACATTTTTTAATTTATTTAAGGGACTAATATGCTATTTCATATATTTGAGGGACTAAATTGCTCGACCCTTACAATTTTGAGAACGAAATGCTCATTTACTCAAGTTTAGATGGAAAACCTTATGATATATCTTGTGTTAACGTTCATATAAAAGAAAACATTTGAGATTTTGTATCATACATTTACCTTGTTGCTTAGCTAAGTGAGAAAATTTGCAGGTATCTACACTGATGACATGAATCATGACCATACAATAGACAAACAAAAACTGATTTCAGCATTTAAGAGCAACTTTGATGCACAGTCCAAGCCAGAACATCGAGAAATCAATGACTCTGATACAAGTCAGGGTAGATTTCAAGAGACAGGTTCTGGAAAATGGGCAACAAGCTGGTCAGAGCAATTCTTTGTACTGTTAAGAAGAGATGTCAAAGAGAGAAAATATGAATCATTCTCTGGCTTGAGGATTGCTCAGGTCCTTGTGGTTGCACTTATGTCAGGACTACTTTGGTATAAATCTGATATGTCACACTTGCAGGATCAGGTAACAATTTGAACAGATATATATAAGAACTTATTTCCATTTCAGATTAACAAAAATTATGCTCTTTATGCATTATTGTTTTCTGAATTTTGTATAACAAGAATGTACTAATGTTGGACAGAGAACTAAGTCAGGATAAAGAAATCAGTATAAGAGTGAGTTTAAATTGCAGTTGGAGTTGGAATTATAAATATTGCAATGAAATGAGGCTGAAACGGTCTCAATTGTGATTGCGAGAAGATCAAAAACCCTGAGAAAACGACCTAGATCATGATCATGGATCTTTATAAAAGACTTTTTAAAAAACAATTTCAACCATGATTTGGGCCGCGGCATCAAGGTTTTTGATGTCTTTCCGACTTTGATTGCACTCGCATCAGGTTTATTTAACTGCAATTCTCTGCAATATTAAGTATATCGTCGTGACTATGACCGTGACTCAAAATCTAGTTTGACTAAACTAATTGTTGGGTATAGCTCATAGTATTAGTAACTGATAAGTGGGAAGGCCGCGTGTGCGAAGTATTTACATTAGACCATAGTATTTAAATCCAAGTTATACACTGTAAACCCTAAACTTTCACCGATAATAGAAAGGAACTGCAGCCGCTCTGCAGTCAGAGTCTCATAGATGTAGGCAAAATTTCCCGAACTTCATTATAAACATCGTGTCTTCAATGTTTGCATCTTTTTTTATTTTTTTGAACTGTGATGGTTGTTCTCTAACACTAATGATCATAATAACATCTCAACTTTCCTTGCAGATTGGCCTACTATTCTTCGTAACAGGCTTTTGGGGATTTTTCCCACTCTTTCAAGCAATCTTCACTTTCCCTCAAGAACTAATGATGCTTGAAAAAGAAAGATCCTCAGGAATGTACAGACTCTCCTCATATTTCATTTCACGAATGGTCGCTGACCTACCAATGGAACTAGTCCTTCCCACAATTTTCCTTCTCATAACATATTTCATGGCAGGACTCAAAGCAACAGTGATAAATTTCTTTCAAACACTTTTCAGCCTCTTACTCAATGTGTTAGTGTCACAAGGACTAGGACTTGCACTTGGTGCTGTTGTGCTTGATCAAAAATCAGCAACAACACTTGCATCAGTGATCATGCTATGTTTCTTACTTGCTGGTGGATTTTATGTTCAGAATGTTCCAAAATTTATAGCATGGGTGAAGTATGTTTCTGTTAGCTACTATACATATCAGCTATTTATTGGGTCACAGTATCATAGTGGTGATACATACCCTTGTTCTAGTGGACAGTGTCTTATTGATGAGTTTCCACCTATAAAACAAATGGGGATTGATTTGAATGGTCTAGGATTGGCTGCATTGGCTCTTGTTATAATGCTAATTGGTTATAGACTAATAGCTTATTGTGCTCTTATGAGGATTGGAGTCACAAAGAAATTGGCTTAG
Protein sequence

>MS.gene065171.t1

MQFDDVVYKIKAKKGGLFKKSIEVEEKTILKGVTGIVQPGEMLAMLGPSGSGKTTLLTALGGRLGGKLYGSITYNEKPFSNVIKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNSVTKEEKVTHAKNVIDQLGLTKCKDSIVGSAYLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWDLARGGRTVVMTIHQPSSRLYYMFHKVLLLAEGNVLYFGKGSEAIEHFSNIGYAPAMAMNPSDFLLDLANGIYTDDMNHDHTIDKQKLISAFKSNFDAQSKPEHREINDSDTSQGRFQETGSGKWATSWSEQFFVLLRRDVKERKYESFSGLRIAQVLVVALMSGLLWYKSDMSHLQDQIGLLFFVTGFWGFFPLFQAIFTFPQELMMLEKERSSGMYRLSSYFISRMVADLPMELVLPTIFLLITYFMAGLKATVINFFQTLFSLLLNVLVSQGLGLALGAVVLDQKSATTLASVIMLCFLLAGGFYVQNVPKFIAWVKYVSVSYYTYQLFIGSQYHSGDTYPCSSGQCLIDEFPPIKQMGIDLNGLGLAALALVIMLIGYRLIAYCALMRIGVTKKLA