Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065256.t1 | RHN75081.1 | 94.7 | 360 | 18 | 1 | 1 | 360 | 1 | 359 | 5.00E-200 | 706.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065256.t1 | Q9FJ45 | 44.9 | 374 | 179 | 10 | 1 | 351 | 1 | 370 | 1.1e-81 | 305.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065256.t1 | A0A396JEK6 | 94.7 | 360 | 18 | 1 | 1 | 360 | 1 | 359 | 3.6e-200 | 706.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene065256 | MS.gene54326 | PPI |
| MS.gene54327 | MS.gene065256 | PPI |
| MS.gene01537 | MS.gene065256 | PPI |
| MS.gene065256 | MS.gene002554 | PPI |
| MS.gene002553 | MS.gene065256 | PPI |
| MS.gene004227 | MS.gene065256 | PPI |
| MS.gene01535 | MS.gene065256 | PPI |
| MS.gene065256 | MS.gene002555 | PPI |
| MS.gene54325 | MS.gene065256 | PPI |
| MS.gene065256 | MS.gene004229 | PPI |
| MS.gene004228 | MS.gene065256 | PPI |
| MS.gene01536 | MS.gene065256 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065256.t1 | MTR_0029s0050 | 93.611 | 360 | 22 | 1 | 1 | 360 | 1 | 359 | 0.0 | 696 |
| MS.gene065256.t1 | MTR_2g079090 | 94.167 | 360 | 20 | 1 | 1 | 360 | 1 | 359 | 0.0 | 695 |
| MS.gene065256.t1 | MTR_2g079080 | 93.611 | 360 | 22 | 1 | 1 | 360 | 1 | 359 | 0.0 | 691 |
| MS.gene065256.t1 | MTR_0029s0100 | 93.056 | 360 | 24 | 1 | 1 | 360 | 1 | 359 | 0.0 | 691 |
| MS.gene065256.t1 | MTR_3g448360 | 70.241 | 373 | 94 | 7 | 1 | 359 | 1 | 370 | 0.0 | 514 |
| MS.gene065256.t1 | MTR_3g069780 | 69.867 | 375 | 94 | 8 | 1 | 360 | 1 | 371 | 4.27e-179 | 501 |
| MS.gene065256.t1 | MTR_3g438030 | 69.600 | 375 | 95 | 8 | 1 | 360 | 1 | 371 | 7.62e-179 | 501 |
| MS.gene065256.t1 | MTR_3g463960 | 64.249 | 386 | 109 | 6 | 3 | 360 | 4 | 388 | 5.86e-174 | 489 |
| MS.gene065256.t1 | MTR_3g463950 | 64.249 | 386 | 109 | 6 | 3 | 360 | 4 | 388 | 5.86e-174 | 489 |
| MS.gene065256.t1 | MTR_3g463970 | 64.249 | 386 | 109 | 6 | 3 | 360 | 4 | 388 | 5.86e-174 | 489 |
| MS.gene065256.t1 | MTR_3g463940 | 64.249 | 386 | 109 | 6 | 3 | 360 | 4 | 388 | 5.86e-174 | 489 |
| MS.gene065256.t1 | MTR_3g069520 | 67.112 | 374 | 104 | 7 | 1 | 360 | 1 | 369 | 3.03e-173 | 486 |
| MS.gene065256.t1 | MTR_3g463930 | 62.850 | 393 | 110 | 7 | 3 | 360 | 4 | 395 | 7.64e-168 | 474 |
| MS.gene065256.t1 | MTR_2g043980 | 61.157 | 363 | 130 | 7 | 1 | 360 | 7 | 361 | 5.89e-150 | 427 |
| MS.gene065256.t1 | MTR_2g015650 | 51.213 | 371 | 162 | 6 | 6 | 360 | 7 | 374 | 1.53e-122 | 358 |
| MS.gene065256.t1 | MTR_2g015670 | 47.514 | 362 | 157 | 7 | 15 | 360 | 16 | 360 | 2.75e-107 | 318 |
| MS.gene065256.t1 | MTR_2g015630 | 47.230 | 343 | 156 | 8 | 35 | 357 | 36 | 373 | 5.24e-97 | 293 |
| MS.gene065256.t1 | MTR_2g043990 | 54.054 | 296 | 106 | 7 | 1 | 293 | 69 | 337 | 2.12e-95 | 288 |
| MS.gene065256.t1 | MTR_2g015580 | 44.058 | 345 | 170 | 8 | 27 | 353 | 44 | 383 | 1.74e-91 | 280 |
| MS.gene065256.t1 | MTR_2g015590 | 42.816 | 348 | 181 | 7 | 19 | 350 | 20 | 365 | 6.49e-87 | 267 |
| MS.gene065256.t1 | MTR_4g104240 | 34.946 | 372 | 211 | 10 | 1 | 350 | 5 | 367 | 1.12e-67 | 218 |
| MS.gene065256.t1 | MTR_2g015590 | 42.349 | 281 | 156 | 5 | 19 | 294 | 20 | 299 | 1.36e-64 | 209 |
| MS.gene065256.t1 | MTR_3g466240 | 52.113 | 213 | 64 | 5 | 102 | 307 | 2 | 183 | 3.44e-60 | 192 |
| MS.gene065256.t1 | MTR_8g028160 | 32.804 | 378 | 209 | 14 | 5 | 350 | 10 | 374 | 6.06e-52 | 177 |
| MS.gene065256.t1 | MTR_1g030268 | 34.648 | 355 | 188 | 12 | 28 | 353 | 38 | 377 | 1.20e-50 | 174 |
| MS.gene065256.t1 | MTR_7g087190 | 31.152 | 382 | 217 | 15 | 5 | 352 | 16 | 385 | 2.03e-49 | 171 |
| MS.gene065256.t1 | MTR_1g030220 | 32.275 | 378 | 211 | 13 | 7 | 353 | 16 | 379 | 2.30e-49 | 171 |
| MS.gene065256.t1 | MTR_1g030340 | 32.124 | 386 | 203 | 14 | 4 | 352 | 18 | 381 | 5.62e-49 | 169 |
| MS.gene065256.t1 | MTR_8g089805 | 33.060 | 366 | 198 | 13 | 20 | 352 | 30 | 381 | 8.67e-49 | 169 |
| MS.gene065256.t1 | MTR_7g116870 | 34.000 | 350 | 191 | 11 | 28 | 350 | 31 | 367 | 1.01e-48 | 168 |
| MS.gene065256.t1 | MTR_3g466190 | 56.287 | 167 | 50 | 7 | 57 | 222 | 7 | 151 | 2.98e-48 | 163 |
| MS.gene065256.t1 | MTR_3g466190 | 57.692 | 78 | 23 | 1 | 293 | 360 | 152 | 229 | 8.61e-21 | 90.1 |
| MS.gene065256.t1 | MTR_1g030275 | 33.898 | 354 | 190 | 12 | 28 | 352 | 37 | 375 | 7.72e-47 | 164 |
| MS.gene065256.t1 | MTR_7g033165 | 32.286 | 350 | 204 | 8 | 27 | 351 | 30 | 371 | 3.70e-45 | 159 |
| MS.gene065256.t1 | MTR_1g082390 | 31.025 | 361 | 213 | 9 | 19 | 353 | 20 | 370 | 5.38e-45 | 158 |
| MS.gene065256.t1 | MTR_6g007090 | 31.551 | 374 | 222 | 11 | 1 | 350 | 7 | 370 | 1.03e-44 | 158 |
| MS.gene065256.t1 | MTR_7g113860 | 30.026 | 383 | 215 | 11 | 2 | 350 | 9 | 372 | 1.28e-44 | 158 |
| MS.gene065256.t1 | MTR_1g030230 | 32.231 | 363 | 202 | 13 | 20 | 352 | 22 | 370 | 4.32e-43 | 154 |
| MS.gene065256.t1 | MTR_7g113860 | 31.198 | 359 | 196 | 10 | 26 | 350 | 25 | 366 | 1.14e-42 | 152 |
| MS.gene065256.t1 | MTR_7g033150 | 31.088 | 386 | 215 | 14 | 4 | 352 | 7 | 378 | 2.32e-42 | 152 |
| MS.gene065256.t1 | MTR_6g007095 | 30.851 | 376 | 224 | 12 | 1 | 350 | 7 | 372 | 1.09e-40 | 152 |
| MS.gene065256.t1 | MTR_6g007095 | 28.808 | 302 | 205 | 6 | 56 | 352 | 394 | 690 | 9.25e-31 | 123 |
| MS.gene065256.t1 | MTR_7g033155 | 30.319 | 376 | 204 | 13 | 22 | 352 | 30 | 392 | 1.30e-40 | 147 |
| MS.gene065256.t1 | MTR_7g111780 | 29.762 | 336 | 206 | 9 | 32 | 352 | 38 | 358 | 2.97e-39 | 143 |
| MS.gene065256.t1 | MTR_6g007100 | 30.387 | 362 | 225 | 11 | 1 | 350 | 7 | 353 | 4.06e-37 | 137 |
| MS.gene065256.t1 | MTR_8g038680 | 30.263 | 380 | 219 | 14 | 1 | 350 | 1 | 364 | 1.91e-36 | 135 |
| MS.gene065256.t1 | MTR_1g030268 | 35.395 | 291 | 159 | 12 | 28 | 303 | 38 | 314 | 5.58e-36 | 133 |
| MS.gene065256.t1 | MTR_1g030265 | 30.565 | 301 | 171 | 9 | 80 | 352 | 53 | 343 | 8.89e-33 | 125 |
| MS.gene065256.t1 | MTR_7g033165 | 31.801 | 261 | 167 | 4 | 27 | 280 | 30 | 286 | 8.98e-33 | 124 |
| MS.gene065256.t1 | MTR_8g022810 | 28.107 | 338 | 201 | 10 | 27 | 342 | 38 | 355 | 5.15e-31 | 121 |
| MS.gene065256.t1 | MTR_1g025780 | 28.909 | 339 | 200 | 13 | 26 | 344 | 37 | 354 | 3.16e-29 | 116 |
| MS.gene065256.t1 | MTR_8g031420 | 27.642 | 369 | 226 | 15 | 4 | 355 | 10 | 354 | 3.80e-29 | 115 |
| MS.gene065256.t1 | MTR_2g015080 | 30.000 | 330 | 193 | 14 | 30 | 335 | 38 | 353 | 1.31e-28 | 114 |
| MS.gene065256.t1 | MTR_2g033930 | 29.518 | 332 | 202 | 11 | 30 | 345 | 32 | 347 | 2.09e-28 | 114 |
| MS.gene065256.t1 | MTR_8g089805 | 28.763 | 299 | 172 | 11 | 85 | 352 | 25 | 313 | 2.93e-28 | 112 |
| MS.gene065256.t1 | MTR_5g022630 | 28.371 | 356 | 221 | 12 | 1 | 338 | 15 | 354 | 5.54e-28 | 112 |
| MS.gene065256.t1 | MTR_8g031390 | 27.666 | 347 | 212 | 13 | 25 | 355 | 32 | 355 | 6.03e-28 | 112 |
| MS.gene065256.t1 | MTR_8g031430 | 28.997 | 369 | 220 | 15 | 7 | 355 | 10 | 356 | 2.15e-27 | 111 |
| MS.gene065256.t1 | MTR_4g056280 | 28.863 | 343 | 206 | 13 | 20 | 343 | 21 | 344 | 5.71e-27 | 109 |
| MS.gene065256.t1 | MTR_5g022640 | 28.375 | 363 | 223 | 12 | 1 | 344 | 15 | 359 | 6.89e-27 | 109 |
| MS.gene065256.t1 | MTR_8g079050 | 28.108 | 370 | 221 | 13 | 2 | 345 | 10 | 360 | 7.93e-27 | 109 |
| MS.gene065256.t1 | MTR_4g056160 | 27.711 | 332 | 208 | 10 | 30 | 343 | 27 | 344 | 1.70e-26 | 108 |
| MS.gene065256.t1 | MTR_7g113860 | 27.036 | 307 | 174 | 9 | 78 | 350 | 8 | 298 | 3.10e-26 | 107 |
| MS.gene065256.t1 | MTR_5g009100 | 27.327 | 333 | 205 | 12 | 32 | 345 | 48 | 362 | 1.46e-25 | 106 |
| MS.gene065256.t1 | MTR_3g005660 | 27.321 | 377 | 229 | 16 | 7 | 356 | 4 | 362 | 1.78e-25 | 105 |
| MS.gene065256.t1 | MTR_1g025680 | 29.970 | 337 | 201 | 12 | 26 | 344 | 30 | 349 | 5.59e-25 | 105 |
| MS.gene065256.t1 | MTR_1g025700 | 29.155 | 367 | 217 | 16 | 2 | 344 | 17 | 364 | 8.06e-25 | 104 |
| MS.gene065256.t1 | MTR_1g025720 | 29.254 | 335 | 193 | 14 | 27 | 339 | 34 | 346 | 9.99e-25 | 103 |
| MS.gene065256.t1 | MTR_2g100620 | 26.946 | 334 | 206 | 13 | 30 | 343 | 31 | 346 | 1.11e-24 | 103 |
| MS.gene065256.t1 | MTR_8g014910 | 26.836 | 354 | 213 | 14 | 11 | 343 | 19 | 347 | 1.50e-24 | 103 |
| MS.gene065256.t1 | MTR_3g098270 | 28.080 | 349 | 212 | 13 | 28 | 356 | 32 | 361 | 1.60e-24 | 103 |
| MS.gene065256.t1 | MTR_2g033920 | 29.290 | 338 | 199 | 12 | 29 | 345 | 34 | 352 | 3.88e-24 | 102 |
| MS.gene065256.t1 | MTR_3g082830 | 27.859 | 341 | 205 | 12 | 30 | 349 | 38 | 358 | 3.92e-24 | 102 |
| MS.gene065256.t1 | MTR_2g044100 | 28.775 | 351 | 203 | 13 | 23 | 348 | 36 | 364 | 4.50e-24 | 102 |
| MS.gene065256.t1 | MTR_7g111780 | 27.985 | 268 | 158 | 9 | 103 | 352 | 9 | 259 | 7.40e-24 | 99.4 |
| MS.gene065256.t1 | MTR_3g464730 | 27.642 | 369 | 214 | 15 | 1 | 344 | 4 | 344 | 1.01e-23 | 100 |
| MS.gene065256.t1 | MTR_8g012540 | 29.560 | 318 | 199 | 11 | 1 | 306 | 1 | 305 | 1.62e-23 | 100 |
| MS.gene065256.t1 | MTR_3g052490 | 27.568 | 370 | 212 | 15 | 3 | 346 | 12 | 351 | 3.11e-23 | 99.8 |
| MS.gene065256.t1 | MTR_5g078210 | 27.198 | 364 | 225 | 15 | 1 | 347 | 1 | 341 | 3.52e-23 | 99.4 |
| MS.gene065256.t1 | MTR_8g031400 | 29.032 | 372 | 219 | 17 | 4 | 355 | 10 | 356 | 3.59e-23 | 99.4 |
| MS.gene065256.t1 | MTR_8g031390 | 28.322 | 286 | 181 | 10 | 25 | 306 | 32 | 297 | 3.65e-23 | 98.6 |
| MS.gene065256.t1 | MTR_1g025760 | 27.596 | 366 | 218 | 13 | 3 | 344 | 53 | 395 | 1.35e-22 | 98.2 |
| MS.gene065256.t1 | MTR_4g087985 | 28.409 | 352 | 213 | 17 | 6 | 335 | 15 | 349 | 7.32e-22 | 95.9 |
| MS.gene065256.t1 | MTR_5g084790 | 27.844 | 334 | 204 | 12 | 30 | 344 | 32 | 347 | 7.70e-22 | 95.5 |
| MS.gene065256.t1 | MTR_5g084750 | 27.434 | 339 | 207 | 12 | 30 | 348 | 30 | 349 | 2.01e-21 | 94.4 |
| MS.gene065256.t1 | MTR_8g087890 | 25.905 | 359 | 223 | 16 | 1 | 340 | 7 | 341 | 2.69e-21 | 94.0 |
| MS.gene065256.t1 | MTR_3g005650 | 26.994 | 326 | 204 | 11 | 30 | 340 | 30 | 336 | 3.14e-21 | 94.0 |
| MS.gene065256.t1 | MTR_4g035353 | 26.087 | 345 | 224 | 12 | 18 | 346 | 19 | 348 | 3.17e-21 | 94.0 |
| MS.gene065256.t1 | MTR_3g435540 | 27.246 | 334 | 202 | 13 | 32 | 344 | 25 | 338 | 4.33e-21 | 93.6 |
| MS.gene065256.t1 | MTR_5g084770 | 26.446 | 363 | 224 | 12 | 2 | 343 | 3 | 343 | 6.10e-21 | 92.8 |
| MS.gene065256.t1 | MTR_5g074270 | 27.666 | 347 | 206 | 13 | 20 | 340 | 19 | 346 | 6.26e-21 | 93.2 |
| MS.gene065256.t1 | MTR_8g075230 | 26.857 | 350 | 219 | 12 | 16 | 344 | 18 | 351 | 1.15e-20 | 92.4 |
| MS.gene065256.t1 | MTR_3g052480 | 27.824 | 363 | 211 | 16 | 8 | 346 | 18 | 353 | 3.82e-20 | 90.9 |
| MS.gene065256.t1 | MTR_5g078210 | 27.350 | 351 | 211 | 15 | 1 | 340 | 1 | 318 | 4.87e-20 | 90.1 |
| MS.gene065256.t1 | MTR_0565s0010 | 24.695 | 328 | 212 | 13 | 31 | 340 | 33 | 343 | 5.35e-20 | 90.5 |
| MS.gene065256.t1 | MTR_8g022810 | 25.767 | 326 | 171 | 8 | 27 | 342 | 38 | 302 | 6.68e-20 | 89.7 |
| MS.gene065256.t1 | MTR_3g052580 | 27.100 | 369 | 213 | 15 | 3 | 346 | 8 | 345 | 6.91e-20 | 90.5 |
| MS.gene065256.t1 | MTR_3g024510 | 24.923 | 325 | 214 | 10 | 31 | 340 | 39 | 348 | 7.34e-20 | 90.1 |
| MS.gene065256.t1 | MTR_3g114090 | 27.729 | 339 | 206 | 13 | 26 | 344 | 32 | 351 | 8.15e-20 | 89.7 |
| MS.gene065256.t1 | MTR_3g052580 | 27.100 | 369 | 213 | 15 | 3 | 346 | 9 | 346 | 8.60e-20 | 90.1 |
| MS.gene065256.t1 | MTR_1g025910 | 27.950 | 322 | 191 | 14 | 35 | 336 | 41 | 341 | 9.77e-20 | 89.7 |
| MS.gene065256.t1 | MTR_4g122200 | 26.113 | 337 | 209 | 10 | 30 | 345 | 35 | 352 | 1.18e-19 | 89.4 |
| MS.gene065256.t1 | MTR_4g019880 | 26.849 | 365 | 220 | 14 | 2 | 345 | 12 | 350 | 1.25e-19 | 89.4 |
| MS.gene065256.t1 | MTR_5g093090 | 26.558 | 369 | 211 | 15 | 4 | 345 | 11 | 346 | 1.44e-19 | 89.0 |
| MS.gene065256.t1 | MTR_0009s0250 | 26.957 | 345 | 197 | 15 | 30 | 351 | 33 | 345 | 2.09e-19 | 88.6 |
| MS.gene065256.t1 | MTR_8g022790 | 26.205 | 332 | 216 | 12 | 25 | 345 | 32 | 345 | 3.20e-19 | 88.2 |
| MS.gene065256.t1 | MTR_1g069175 | 25.145 | 346 | 224 | 11 | 19 | 345 | 22 | 351 | 1.05e-18 | 86.7 |
| MS.gene065256.t1 | MTR_7g116570 | 24.661 | 369 | 238 | 14 | 4 | 350 | 7 | 357 | 1.30e-18 | 86.7 |
| MS.gene065256.t1 | MTR_2g084585 | 26.111 | 360 | 230 | 13 | 2 | 343 | 3 | 344 | 1.32e-18 | 86.3 |
| MS.gene065256.t1 | MTR_3g021460 | 25.140 | 358 | 232 | 13 | 1 | 345 | 1 | 335 | 2.01e-18 | 85.9 |
| MS.gene065256.t1 | MTR_6g021530 | 25.872 | 344 | 215 | 13 | 29 | 350 | 28 | 353 | 2.14e-18 | 85.9 |
| MS.gene065256.t1 | MTR_8g075200 | 26.790 | 377 | 221 | 14 | 1 | 344 | 2 | 356 | 2.47e-18 | 85.9 |
| MS.gene065256.t1 | MTR_1g060490 | 26.807 | 332 | 188 | 14 | 29 | 338 | 36 | 334 | 5.24e-18 | 84.3 |
| MS.gene065256.t1 | MTR_1g024890 | 26.844 | 339 | 205 | 14 | 29 | 345 | 31 | 348 | 1.03e-17 | 84.0 |
| MS.gene065256.t1 | MTR_5g087690 | 25.000 | 356 | 226 | 12 | 18 | 355 | 37 | 369 | 1.05e-17 | 84.0 |
| MS.gene065256.t1 | MTR_3g023220 | 26.822 | 343 | 203 | 12 | 31 | 356 | 34 | 345 | 2.08e-17 | 82.8 |
| MS.gene065256.t1 | MTR_2g461580 | 26.257 | 358 | 228 | 14 | 1 | 345 | 1 | 335 | 4.58e-17 | 81.6 |
| MS.gene065256.t1 | MTR_8g075220 | 24.933 | 373 | 238 | 11 | 1 | 344 | 1 | 360 | 6.53e-17 | 81.6 |
| MS.gene065256.t1 | MTR_7g116500 | 24.324 | 333 | 221 | 9 | 29 | 345 | 32 | 349 | 1.09e-16 | 80.9 |
| MS.gene065256.t1 | MTR_2g017965 | 25.501 | 349 | 219 | 15 | 8 | 339 | 13 | 337 | 4.17e-16 | 79.3 |
| MS.gene065256.t1 | MTR_2g033920 | 27.972 | 286 | 176 | 9 | 29 | 301 | 34 | 302 | 4.76e-16 | 78.2 |
| MS.gene065256.t1 | MTR_1g079530 | 25.959 | 339 | 206 | 15 | 27 | 345 | 26 | 339 | 7.99e-16 | 78.2 |
| MS.gene065256.t1 | MTR_1g079540 | 25.595 | 336 | 213 | 12 | 29 | 345 | 30 | 347 | 9.58e-16 | 78.2 |
| MS.gene065256.t1 | MTR_3g114120 | 29.970 | 337 | 183 | 19 | 30 | 339 | 47 | 357 | 2.17e-15 | 77.0 |
| MS.gene065256.t1 | MTR_1g092750 | 26.113 | 337 | 193 | 17 | 31 | 342 | 41 | 346 | 3.82e-15 | 76.3 |
| MS.gene065256.t1 | MTR_2g017875 | 26.934 | 349 | 202 | 16 | 31 | 356 | 35 | 353 | 5.18e-15 | 75.9 |
| MS.gene065256.t1 | MTR_7g008060 | 22.500 | 360 | 231 | 13 | 4 | 345 | 7 | 336 | 2.64e-13 | 70.5 |
| MS.gene065256.t1 | MTR_5g093090 | 26.129 | 310 | 180 | 13 | 4 | 294 | 11 | 290 | 1.33e-12 | 68.2 |
| MS.gene065256.t1 | MTR_8g074570 | 25.000 | 360 | 232 | 15 | 6 | 345 | 15 | 356 | 2.14e-12 | 68.2 |
| MS.gene065256.t1 | MTR_2g017925 | 25.723 | 346 | 221 | 14 | 6 | 339 | 11 | 332 | 5.11e-12 | 67.0 |
| MS.gene065256.t1 | MTR_1g092760 | 24.340 | 341 | 193 | 18 | 31 | 342 | 40 | 344 | 1.51e-11 | 65.5 |
| MS.gene065256.t1 | MTR_2g017915 | 26.316 | 342 | 190 | 16 | 32 | 356 | 35 | 331 | 1.87e-11 | 65.1 |
| MS.gene065256.t1 | MTR_1108s0010 | 31.544 | 149 | 86 | 3 | 208 | 348 | 68 | 208 | 2.64e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065256.t1 | AT5G45910 | 44.920 | 374 | 179 | 10 | 1 | 351 | 1 | 370 | 4.64e-100 | 301 |
| MS.gene065256.t1 | AT1G28610 | 43.909 | 353 | 179 | 6 | 15 | 351 | 16 | 365 | 2.53e-91 | 279 |
| MS.gene065256.t1 | AT1G28590 | 42.135 | 356 | 186 | 7 | 15 | 353 | 21 | 373 | 7.76e-87 | 268 |
| MS.gene065256.t1 | AT1G28570 | 40.833 | 360 | 195 | 6 | 7 | 350 | 11 | 368 | 1.98e-86 | 266 |
| MS.gene065256.t1 | AT1G28600 | 41.530 | 366 | 184 | 10 | 3 | 350 | 11 | 364 | 1.04e-85 | 265 |
| MS.gene065256.t1 | AT1G28580 | 40.331 | 362 | 196 | 7 | 6 | 350 | 13 | 371 | 9.21e-84 | 259 |
| MS.gene065256.t1 | AT2G27360 | 40.548 | 365 | 195 | 7 | 3 | 350 | 9 | 368 | 1.45e-83 | 259 |
| MS.gene065256.t1 | AT1G31550 | 40.599 | 367 | 194 | 9 | 1 | 350 | 10 | 369 | 3.71e-81 | 253 |
| MS.gene065256.t1 | AT1G28670 | 39.542 | 349 | 192 | 6 | 21 | 352 | 26 | 372 | 4.91e-79 | 247 |
| MS.gene065256.t1 | AT1G28650 | 39.883 | 341 | 187 | 5 | 28 | 352 | 35 | 373 | 2.29e-78 | 246 |
| MS.gene065256.t1 | AT1G28660 | 39.542 | 349 | 191 | 7 | 21 | 352 | 26 | 371 | 3.05e-78 | 245 |
| MS.gene065256.t1 | AT1G31550 | 39.782 | 367 | 194 | 9 | 1 | 350 | 10 | 366 | 1.16e-77 | 244 |
| MS.gene065256.t1 | AT1G28640 | 39.255 | 349 | 192 | 7 | 21 | 352 | 26 | 371 | 1.21e-77 | 244 |
| MS.gene065256.t1 | AT1G28660 | 39.542 | 349 | 190 | 8 | 21 | 352 | 26 | 370 | 1.66e-77 | 243 |
| MS.gene065256.t1 | AT3G48460 | 35.028 | 354 | 194 | 10 | 28 | 358 | 36 | 376 | 4.20e-63 | 206 |
| MS.gene065256.t1 | AT1G28580 | 38.754 | 289 | 161 | 6 | 75 | 350 | 5 | 290 | 1.05e-62 | 203 |
| MS.gene065256.t1 | AT5G03980 | 34.091 | 352 | 166 | 8 | 6 | 342 | 10 | 310 | 1.48e-57 | 190 |
| MS.gene065256.t1 | AT1G54790 | 31.680 | 363 | 205 | 10 | 26 | 357 | 28 | 378 | 1.35e-47 | 166 |
| MS.gene065256.t1 | AT3G05180 | 31.805 | 349 | 199 | 10 | 28 | 348 | 34 | 371 | 5.61e-46 | 161 |
| MS.gene065256.t1 | AT4G01130 | 33.803 | 355 | 189 | 13 | 28 | 350 | 32 | 372 | 1.57e-45 | 160 |
| MS.gene065256.t1 | AT1G28570 | 38.756 | 209 | 116 | 3 | 154 | 350 | 88 | 296 | 1.29e-44 | 156 |
| MS.gene065256.t1 | AT1G28570 | 45.455 | 77 | 38 | 1 | 7 | 79 | 11 | 87 | 3.32e-12 | 67.0 |
| MS.gene065256.t1 | AT1G56670 | 29.700 | 367 | 228 | 9 | 2 | 350 | 9 | 363 | 2.12e-44 | 157 |
| MS.gene065256.t1 | AT1G54790 | 30.435 | 391 | 224 | 13 | 1 | 357 | 1 | 377 | 5.83e-44 | 156 |
| MS.gene065256.t1 | AT1G28570 | 38.725 | 204 | 113 | 3 | 159 | 350 | 2 | 205 | 6.92e-44 | 151 |
| MS.gene065256.t1 | AT1G67830 | 30.704 | 355 | 205 | 11 | 21 | 345 | 21 | 364 | 5.11e-43 | 153 |
| MS.gene065256.t1 | AT5G14450 | 29.412 | 374 | 226 | 10 | 5 | 350 | 15 | 378 | 6.19e-43 | 153 |
| MS.gene065256.t1 | AT3G26430 | 31.755 | 359 | 196 | 11 | 28 | 352 | 29 | 372 | 2.26e-42 | 152 |
| MS.gene065256.t1 | AT1G28600 | 41.148 | 209 | 106 | 7 | 3 | 205 | 11 | 208 | 2.57e-40 | 142 |
| MS.gene065256.t1 | AT3G27950 | 30.108 | 372 | 222 | 9 | 5 | 352 | 7 | 364 | 1.06e-39 | 144 |
| MS.gene065256.t1 | AT1G28610 | 42.000 | 200 | 110 | 3 | 15 | 210 | 16 | 213 | 1.39e-39 | 141 |
| MS.gene065256.t1 | AT1G54790 | 28.916 | 415 | 225 | 14 | 1 | 357 | 1 | 403 | 6.71e-39 | 143 |
| MS.gene065256.t1 | AT3G62280 | 29.226 | 349 | 206 | 11 | 21 | 350 | 31 | 357 | 5.02e-38 | 140 |
| MS.gene065256.t1 | AT1G09390 | 27.473 | 364 | 233 | 9 | 4 | 350 | 11 | 360 | 3.46e-37 | 137 |
| MS.gene065256.t1 | AT4G01130 | 35.125 | 279 | 157 | 10 | 28 | 294 | 32 | 298 | 8.67e-36 | 133 |
| MS.gene065256.t1 | AT1G56670 | 29.766 | 299 | 194 | 7 | 2 | 294 | 9 | 297 | 4.17e-33 | 125 |
| MS.gene065256.t1 | AT1G20120 | 29.155 | 343 | 203 | 13 | 27 | 347 | 75 | 399 | 3.67e-29 | 116 |
| MS.gene065256.t1 | AT1G75890 | 27.500 | 360 | 226 | 13 | 4 | 344 | 20 | 363 | 1.85e-27 | 111 |
| MS.gene065256.t1 | AT1G75890 | 27.596 | 366 | 231 | 13 | 4 | 344 | 20 | 376 | 3.22e-27 | 110 |
| MS.gene065256.t1 | AT1G75890 | 27.500 | 360 | 226 | 13 | 4 | 344 | 49 | 392 | 3.79e-27 | 111 |
| MS.gene065256.t1 | AT1G75880 | 28.883 | 367 | 212 | 14 | 8 | 344 | 20 | 367 | 4.62e-27 | 110 |
| MS.gene065256.t1 | AT1G73610 | 28.659 | 328 | 202 | 11 | 27 | 344 | 32 | 337 | 1.11e-26 | 108 |
| MS.gene065256.t1 | AT5G15720 | 28.182 | 330 | 200 | 13 | 30 | 339 | 30 | 342 | 3.33e-26 | 107 |
| MS.gene065256.t1 | AT3G62280 | 28.826 | 281 | 173 | 9 | 21 | 294 | 31 | 291 | 3.39e-26 | 106 |
| MS.gene065256.t1 | AT4G10950 | 25.826 | 333 | 214 | 12 | 30 | 345 | 71 | 387 | 1.81e-25 | 106 |
| MS.gene065256.t1 | AT1G20132 | 29.042 | 334 | 200 | 12 | 30 | 344 | 61 | 376 | 2.04e-25 | 105 |
| MS.gene065256.t1 | AT1G75880 | 28.804 | 368 | 212 | 15 | 8 | 344 | 20 | 368 | 2.48e-25 | 105 |
| MS.gene065256.t1 | AT5G45950 | 28.793 | 323 | 193 | 14 | 34 | 340 | 44 | 345 | 3.60e-25 | 105 |
| MS.gene065256.t1 | AT2G40250 | 28.779 | 344 | 201 | 15 | 21 | 339 | 26 | 350 | 6.51e-25 | 104 |
| MS.gene065256.t1 | AT1G71120 | 26.627 | 338 | 200 | 10 | 30 | 345 | 31 | 342 | 7.00e-25 | 104 |
| MS.gene065256.t1 | AT1G23500 | 28.125 | 352 | 211 | 14 | 6 | 345 | 18 | 339 | 9.08e-25 | 103 |
| MS.gene065256.t1 | AT4G01130 | 28.716 | 296 | 171 | 10 | 85 | 350 | 1 | 286 | 1.05e-24 | 102 |
| MS.gene065256.t1 | AT3G53100 | 26.727 | 333 | 207 | 13 | 30 | 343 | 29 | 343 | 1.59e-24 | 103 |
| MS.gene065256.t1 | AT3G14820 | 28.060 | 335 | 196 | 12 | 30 | 343 | 32 | 342 | 5.95e-24 | 101 |
| MS.gene065256.t1 | AT5G63170 | 27.532 | 316 | 198 | 11 | 30 | 335 | 28 | 322 | 7.39e-24 | 100 |
| MS.gene065256.t1 | AT2G42990 | 29.107 | 347 | 206 | 14 | 13 | 339 | 12 | 338 | 7.98e-24 | 101 |
| MS.gene065256.t1 | AT3G14225 | 26.724 | 348 | 213 | 12 | 30 | 355 | 37 | 364 | 9.40e-24 | 101 |
| MS.gene065256.t1 | AT1G20135 | 25.545 | 321 | 210 | 10 | 27 | 338 | 26 | 326 | 1.47e-23 | 100 |
| MS.gene065256.t1 | AT1G06990 | 28.493 | 365 | 226 | 14 | 1 | 347 | 9 | 356 | 1.49e-23 | 100 |
| MS.gene065256.t1 | AT1G71691 | 28.190 | 337 | 197 | 11 | 30 | 345 | 55 | 367 | 2.40e-23 | 100 |
| MS.gene065256.t1 | AT1G75920 | 28.571 | 364 | 204 | 17 | 1 | 344 | 9 | 336 | 3.20e-23 | 99.4 |
| MS.gene065256.t1 | AT1G75910 | 27.147 | 361 | 212 | 12 | 5 | 344 | 6 | 336 | 5.73e-23 | 98.6 |
| MS.gene065256.t1 | AT4G10950 | 25.526 | 333 | 211 | 13 | 30 | 345 | 71 | 383 | 5.78e-23 | 99.4 |
| MS.gene065256.t1 | AT1G74460 | 25.762 | 361 | 221 | 12 | 3 | 344 | 6 | 338 | 7.14e-23 | 98.6 |
| MS.gene065256.t1 | AT1G29670 | 27.134 | 328 | 202 | 13 | 31 | 340 | 33 | 341 | 1.29e-22 | 97.8 |
| MS.gene065256.t1 | AT3G14225 | 27.429 | 350 | 212 | 13 | 30 | 355 | 37 | 368 | 1.48e-22 | 97.8 |
| MS.gene065256.t1 | AT1G71250 | 26.190 | 336 | 217 | 11 | 30 | 349 | 41 | 361 | 1.74e-22 | 97.8 |
| MS.gene065256.t1 | AT5G08460 | 29.129 | 333 | 199 | 15 | 28 | 339 | 47 | 363 | 2.14e-22 | 97.4 |
| MS.gene065256.t1 | AT5G42170 | 25.994 | 327 | 214 | 11 | 30 | 343 | 50 | 361 | 2.90e-22 | 97.1 |
| MS.gene065256.t1 | AT1G29670 | 27.439 | 328 | 201 | 13 | 31 | 340 | 101 | 409 | 3.46e-22 | 97.4 |
| MS.gene065256.t1 | AT5G22810 | 26.912 | 353 | 213 | 14 | 15 | 343 | 20 | 351 | 4.75e-22 | 96.3 |
| MS.gene065256.t1 | AT3G50400 | 28.954 | 373 | 211 | 17 | 3 | 345 | 10 | 358 | 2.95e-21 | 94.4 |
| MS.gene065256.t1 | AT1G75900 | 25.826 | 333 | 209 | 12 | 30 | 343 | 43 | 356 | 5.56e-21 | 93.2 |
| MS.gene065256.t1 | AT5G15720 | 28.470 | 281 | 167 | 12 | 30 | 294 | 30 | 292 | 6.69e-21 | 92.4 |
| MS.gene065256.t1 | AT1G59406 | 26.870 | 361 | 228 | 11 | 1 | 344 | 1 | 342 | 1.16e-20 | 92.0 |
| MS.gene065256.t1 | AT1G59030 | 26.870 | 361 | 228 | 11 | 1 | 344 | 1 | 342 | 1.16e-20 | 92.0 |
| MS.gene065256.t1 | AT1G58725 | 26.870 | 361 | 228 | 11 | 1 | 344 | 1 | 342 | 1.16e-20 | 92.0 |
| MS.gene065256.t1 | AT1G53920 | 26.575 | 365 | 227 | 14 | 9 | 352 | 27 | 371 | 2.53e-20 | 91.7 |
| MS.gene065256.t1 | AT2G23540 | 27.536 | 345 | 200 | 14 | 30 | 345 | 48 | 371 | 2.73e-20 | 91.7 |
| MS.gene065256.t1 | AT5G41890 | 27.123 | 365 | 219 | 13 | 11 | 345 | 12 | 359 | 4.03e-20 | 90.9 |
| MS.gene065256.t1 | AT3G04290 | 26.048 | 334 | 214 | 11 | 29 | 345 | 28 | 345 | 4.04e-20 | 90.9 |
| MS.gene065256.t1 | AT1G71691 | 28.674 | 279 | 163 | 8 | 30 | 294 | 55 | 311 | 6.48e-20 | 89.4 |
| MS.gene065256.t1 | AT2G30220 | 27.577 | 359 | 217 | 13 | 5 | 339 | 6 | 345 | 6.77e-20 | 90.1 |
| MS.gene065256.t1 | AT1G58520 | 27.353 | 340 | 212 | 10 | 18 | 344 | 18 | 335 | 7.34e-20 | 89.7 |
| MS.gene065256.t1 | AT1G58525 | 27.353 | 340 | 212 | 10 | 18 | 344 | 18 | 335 | 7.34e-20 | 89.7 |
| MS.gene065256.t1 | AT1G75920 | 27.704 | 379 | 203 | 18 | 1 | 344 | 4 | 346 | 1.01e-19 | 89.4 |
| MS.gene065256.t1 | AT1G75930 | 27.273 | 330 | 207 | 13 | 27 | 343 | 26 | 335 | 1.07e-19 | 89.4 |
| MS.gene065256.t1 | AT2G30310 | 28.056 | 360 | 215 | 15 | 3 | 339 | 8 | 346 | 1.11e-19 | 89.4 |
| MS.gene065256.t1 | AT2G31540 | 28.032 | 371 | 216 | 15 | 7 | 348 | 11 | 359 | 1.19e-19 | 89.4 |
| MS.gene065256.t1 | AT5G40990 | 26.158 | 367 | 228 | 12 | 4 | 346 | 11 | 358 | 1.28e-19 | 89.4 |
| MS.gene065256.t1 | AT1G20130 | 27.405 | 343 | 201 | 14 | 30 | 344 | 204 | 526 | 1.42e-19 | 90.5 |
| MS.gene065256.t1 | AT1G20130 | 27.405 | 343 | 201 | 14 | 30 | 344 | 184 | 506 | 2.59e-19 | 89.4 |
| MS.gene065256.t1 | AT3G16370 | 25.220 | 341 | 213 | 12 | 30 | 348 | 30 | 350 | 3.31e-19 | 88.2 |
| MS.gene065256.t1 | AT2G04570 | 25.444 | 338 | 213 | 12 | 30 | 347 | 28 | 346 | 4.09e-19 | 87.8 |
| MS.gene065256.t1 | AT5G55050 | 27.893 | 337 | 199 | 16 | 27 | 338 | 36 | 353 | 5.56e-19 | 87.8 |
| MS.gene065256.t1 | AT1G53940 | 28.280 | 343 | 199 | 14 | 30 | 346 | 39 | 360 | 7.05e-19 | 87.4 |
| MS.gene065256.t1 | AT5G03810 | 26.176 | 340 | 201 | 14 | 30 | 343 | 30 | 345 | 9.90e-19 | 86.7 |
| MS.gene065256.t1 | AT4G26790 | 24.854 | 342 | 218 | 12 | 28 | 349 | 27 | 349 | 1.32e-18 | 86.3 |
| MS.gene065256.t1 | AT4G26790 | 24.854 | 342 | 218 | 12 | 28 | 349 | 27 | 349 | 1.32e-18 | 86.3 |
| MS.gene065256.t1 | AT5G03610 | 25.439 | 342 | 204 | 13 | 25 | 344 | 38 | 350 | 2.88e-18 | 85.5 |
| MS.gene065256.t1 | AT1G75920 | 28.889 | 315 | 177 | 15 | 50 | 344 | 21 | 308 | 2.89e-18 | 84.7 |
| MS.gene065256.t1 | AT5G45960 | 26.190 | 336 | 213 | 13 | 27 | 342 | 44 | 364 | 4.34e-18 | 85.1 |
| MS.gene065256.t1 | AT2G03980 | 28.097 | 331 | 201 | 13 | 27 | 339 | 40 | 351 | 6.19e-18 | 84.3 |
| MS.gene065256.t1 | AT2G03980 | 28.097 | 331 | 201 | 13 | 27 | 339 | 40 | 351 | 6.19e-18 | 84.3 |
| MS.gene065256.t1 | AT2G03980 | 28.097 | 331 | 201 | 13 | 27 | 339 | 40 | 351 | 6.19e-18 | 84.3 |
| MS.gene065256.t1 | AT2G03980 | 28.097 | 331 | 201 | 13 | 27 | 339 | 40 | 351 | 6.19e-18 | 84.3 |
| MS.gene065256.t1 | AT5G33370 | 25.519 | 337 | 212 | 12 | 29 | 345 | 29 | 346 | 8.55e-18 | 84.0 |
| MS.gene065256.t1 | AT1G53990 | 24.468 | 376 | 233 | 14 | 3 | 355 | 8 | 355 | 9.39e-18 | 84.0 |
| MS.gene065256.t1 | AT1G58430 | 26.462 | 359 | 227 | 11 | 4 | 342 | 9 | 350 | 1.48e-17 | 83.2 |
| MS.gene065256.t1 | AT1G33811 | 25.434 | 346 | 226 | 13 | 14 | 340 | 18 | 350 | 3.05e-17 | 82.4 |
| MS.gene065256.t1 | AT1G29660 | 25.688 | 327 | 209 | 14 | 31 | 340 | 33 | 342 | 3.17e-17 | 82.4 |
| MS.gene065256.t1 | AT2G24560 | 27.119 | 354 | 216 | 13 | 4 | 335 | 9 | 342 | 9.15e-17 | 80.9 |
| MS.gene065256.t1 | AT2G19060 | 27.273 | 341 | 197 | 16 | 31 | 350 | 31 | 341 | 2.19e-16 | 79.7 |
| MS.gene065256.t1 | AT3G09930 | 25.373 | 335 | 210 | 11 | 21 | 338 | 30 | 341 | 3.54e-16 | 79.3 |
| MS.gene065256.t1 | AT3G09930 | 25.373 | 335 | 210 | 11 | 21 | 338 | 30 | 341 | 3.54e-16 | 79.3 |
| MS.gene065256.t1 | AT5G45670 | 23.837 | 344 | 216 | 12 | 20 | 340 | 20 | 340 | 9.61e-16 | 78.2 |
| MS.gene065256.t1 | AT5G37690 | 23.662 | 355 | 236 | 13 | 6 | 342 | 1 | 338 | 1.49e-15 | 77.4 |
| MS.gene065256.t1 | AT4G18970 | 23.952 | 334 | 207 | 12 | 31 | 340 | 29 | 339 | 3.37e-15 | 76.3 |
| MS.gene065256.t1 | AT4G18970 | 23.952 | 334 | 207 | 12 | 31 | 340 | 29 | 339 | 4.26e-15 | 76.3 |
| MS.gene065256.t1 | AT2G19010 | 27.300 | 337 | 200 | 13 | 31 | 350 | 31 | 339 | 7.35e-15 | 75.1 |
| MS.gene065256.t1 | AT2G19010 | 27.300 | 337 | 200 | 13 | 31 | 350 | 61 | 369 | 8.63e-15 | 75.5 |
| MS.gene065256.t1 | AT5G03600 | 24.377 | 361 | 219 | 13 | 1 | 338 | 13 | 342 | 1.42e-14 | 74.3 |
| MS.gene065256.t1 | AT5G15720 | 26.148 | 283 | 168 | 13 | 79 | 339 | 48 | 311 | 1.44e-14 | 74.3 |
| MS.gene065256.t1 | AT5G03600 | 24.169 | 331 | 204 | 11 | 24 | 338 | 8 | 307 | 1.70e-14 | 73.9 |
| MS.gene065256.t1 | AT1G71691 | 25.517 | 290 | 172 | 10 | 76 | 345 | 1 | 266 | 8.60e-14 | 71.2 |
| MS.gene065256.t1 | AT3G43550 | 26.761 | 284 | 182 | 9 | 20 | 294 | 20 | 286 | 1.06e-13 | 71.2 |
| MS.gene065256.t1 | AT1G53940 | 28.674 | 279 | 167 | 11 | 29 | 294 | 38 | 297 | 1.49e-13 | 70.9 |
| MS.gene065256.t1 | AT2G24560 | 26.923 | 312 | 197 | 11 | 4 | 301 | 9 | 303 | 1.90e-13 | 70.9 |
| MS.gene065256.t1 | AT2G19050 | 26.453 | 344 | 194 | 17 | 31 | 348 | 32 | 342 | 1.06e-12 | 68.9 |
| MS.gene065256.t1 | AT1G54010 | 24.471 | 331 | 202 | 15 | 31 | 342 | 37 | 338 | 1.33e-12 | 68.9 |
| MS.gene065256.t1 | AT3G14220 | 24.576 | 354 | 205 | 16 | 10 | 339 | 16 | 331 | 4.42e-12 | 67.0 |
| MS.gene065256.t1 | AT5G33370 | 25.806 | 279 | 177 | 10 | 29 | 294 | 29 | 290 | 5.24e-12 | 66.6 |
| MS.gene065256.t1 | AT1G54030 | 23.511 | 319 | 198 | 14 | 29 | 334 | 51 | 336 | 9.80e-12 | 66.2 |
| MS.gene065256.t1 | AT5G37690 | 22.946 | 353 | 233 | 14 | 6 | 342 | 1 | 330 | 8.08e-11 | 63.2 |
Find 64 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAGAAATAGTTCCCTTTA+TGG | 0.130841 | 2.4:-19174866 | MS.gene065256:CDS |
| ATCCTTCAAAACGTATAAAT+TGG | 0.154270 | 2.4:-19174215 | MS.gene065256:CDS |
| AAAGAAGACTATGATGAATT+TGG | 0.177918 | 2.4:-19174597 | MS.gene065256:CDS |
| GTCTTTGCTTTCATTCTTAA+AGG | 0.198948 | 2.4:+19175257 | None:intergenic |
| AATTTAGTCGAGTACTTTAA+TGG | 0.225097 | 2.4:-19174555 | MS.gene065256:CDS |
| CTCAATGAGTTATTTGTATC+TGG | 0.254916 | 2.4:+19175147 | None:intergenic |
| TTAAGAGAAGGATTTGAAAA+TGG | 0.264149 | 2.4:+19174132 | None:intergenic |
| TATGAAGCTTTCTTTAACTT+TGG | 0.264191 | 2.4:-19175704 | MS.gene065256:CDS |
| TTGTTTATAGTTGGAGAAAT+TGG | 0.283387 | 2.4:-19174937 | MS.gene065256:CDS |
| ATGCCTAACCCTATTCCTTA+TGG | 0.311052 | 2.4:-19175635 | MS.gene065256:CDS |
| AGTAATGGCTTCAACCATAA+AGG | 0.331538 | 2.4:+19174852 | None:intergenic |
| TAAGTAGAACCATAAGGAAT+AGG | 0.340666 | 2.4:+19175626 | None:intergenic |
| AAGAAATCATTGTTTATAGT+TGG | 0.348062 | 2.4:-19174946 | MS.gene065256:CDS |
| TCAATTGTAGCCGAGGCATA+TGG | 0.349088 | 2.4:-19175297 | MS.gene065256:intron |
| GAAGAGAGTGAATATATTCA+TGG | 0.366592 | 2.4:+19175787 | None:intergenic |
| TATCAAACACCACAACAATA+TGG | 0.370274 | 2.4:-19174441 | MS.gene065256:intron |
| AAGTATATTATCTTAACTTC+AGG | 0.374656 | 2.4:+19174492 | None:intergenic |
| TTTCCGATGGGGTGCAGTGC+TGG | 0.375763 | 2.4:-19174648 | MS.gene065256:CDS |
| ATTTAGTCGAGTACTTTAAT+GGG | 0.379933 | 2.4:-19174554 | MS.gene065256:CDS |
| AAGAAGACTATGATGAATTT+GGG | 0.390648 | 2.4:-19174596 | MS.gene065256:CDS |
| ACTTACTTTAAACATCCTTC+AGG | 0.400463 | 2.4:-19175608 | MS.gene065256:CDS |
| TGCAATAAAACATACATTTG+TGG | 0.419456 | 2.4:+19174825 | None:intergenic |
| GCTGTAGAGCTAGTGGTGCC+TGG | 0.423142 | 2.4:-19174675 | MS.gene065256:CDS |
| CATTGAGCATTCAACTTGGA+TGG | 0.434862 | 2.4:-19175131 | MS.gene065256:CDS |
| GCTTATAAGCTAATAGCAAA+AGG | 0.438238 | 2.4:-19174168 | MS.gene065256:CDS |
| TACATTTGTGGTGTTAGTAA+TGG | 0.442995 | 2.4:+19174837 | None:intergenic |
| AAGTAGAACCATAAGGAATA+GGG | 0.452342 | 2.4:+19175627 | None:intergenic |
| CAATTGTAGCCGAGGCATAT+GGG | 0.454691 | 2.4:-19175296 | MS.gene065256:intron |
| TCCTTCAAAACGTATAAATT+GGG | 0.456516 | 2.4:-19174214 | MS.gene065256:CDS |
| AAAAGAGGGGATTTAAGAGA+AGG | 0.458433 | 2.4:+19174120 | None:intergenic |
| GTAATGGCTTCAACCATAAA+GGG | 0.480246 | 2.4:+19174853 | None:intergenic |
| TTGCTTTCATTCTTAAAGGC+AGG | 0.481404 | 2.4:+19175261 | None:intergenic |
| GAACCATAAGGAATAGGGTT+AGG | 0.482948 | 2.4:+19175632 | None:intergenic |
| CCTTCAGGACGTATGTCAAA+TGG | 0.484377 | 2.4:-19175593 | MS.gene065256:CDS |
| TTCTTCATCACCTTCACATG+TGG | 0.489386 | 2.4:-19175767 | MS.gene065256:CDS |
| GAGTTATTTGTATCTGGAAG+AGG | 0.491124 | 2.4:+19175153 | None:intergenic |
| TGGTGTTTGATATAAACGTT+TGG | 0.492868 | 2.4:+19174452 | None:intergenic |
| AACTCATTGAGCATTCAACT+TGG | 0.498581 | 2.4:-19175135 | MS.gene065256:CDS |
| GGAAATGCTGCGTTTGTCTA+CGG | 0.500564 | 2.4:-19175662 | MS.gene065256:CDS |
| CTCCTCTGTAAAAGCAAAGA+AGG | 0.500581 | 2.4:-19175087 | MS.gene065256:intron |
| AGTATATTATCTTAACTTCA+GGG | 0.506555 | 2.4:+19174493 | None:intergenic |
| AAAGTATGTTGTGGAGGATG+TGG | 0.512867 | 2.4:-19174264 | MS.gene065256:CDS |
| CTTATAAGCTAATAGCAAAA+GGG | 0.513103 | 2.4:-19174167 | MS.gene065256:CDS |
| TTTATAGTTGGAGAAATTGG+TGG | 0.517613 | 2.4:-19174934 | MS.gene065256:CDS |
| CTGTAGAGCTAGTGGTGCCT+GGG | 0.525536 | 2.4:-19174674 | MS.gene065256:CDS |
| ATAGCAAAAGGGCTAGTTGA+GGG | 0.540275 | 2.4:-19174156 | MS.gene065256:CDS |
| TTAAAGTAAGTAGAACCATA+AGG | 0.541599 | 2.4:+19175620 | None:intergenic |
| TGCTAGGTGCTAATCGAAGA+AGG | 0.549087 | 2.4:-19174699 | MS.gene065256:intron |
| TTGTAGAAAACCACATGTGA+AGG | 0.567522 | 2.4:+19175757 | None:intergenic |
| TTATAGTTGGAGAAATTGGT+GGG | 0.571013 | 2.4:-19174933 | MS.gene065256:CDS |
| GGTGATTCAATAAGTGACAC+TGG | 0.575857 | 2.4:-19175683 | MS.gene065256:CDS |
| AGAAGGAGCTGTAGAGCTAG+TGG | 0.584696 | 2.4:-19174682 | MS.gene065256:CDS |
| CACCCCATCGGAAAATTCCC+AGG | 0.584888 | 2.4:+19174657 | None:intergenic |
| AAAAGGCAACCCATATGCCT+CGG | 0.587551 | 2.4:+19175287 | None:intergenic |
| CCATTTGACATACGTCCTGA+AGG | 0.596686 | 2.4:+19175593 | None:intergenic |
| AAGAAAGCTTCATATGAGAG+AGG | 0.610367 | 2.4:+19175713 | None:intergenic |
| GTTCCAGCACTGCACCCCAT+CGG | 0.622939 | 2.4:+19174645 | None:intergenic |
| TACCGCTCACCATATTGTTG+TGG | 0.624718 | 2.4:+19174432 | None:intergenic |
| TAAGGAATAGGGTTAGGCAT+AGG | 0.635829 | 2.4:+19175638 | None:intergenic |
| TCAAAACGTATAAATTGGGA+CGG | 0.645170 | 2.4:-19174210 | MS.gene065256:CDS |
| AATAGCAAAAGGGCTAGTTG+AGG | 0.650233 | 2.4:-19174157 | MS.gene065256:CDS |
| TAAGCTGCTTCAGTAAAGTG+AGG | 0.670311 | 2.4:+19174186 | None:intergenic |
| CAGTGCTGGAACATTGACAT+CGG | 0.723676 | 2.4:-19174634 | MS.gene065256:CDS |
| ATACTCAACATTGAGTACAG+TGG | 0.728519 | 2.4:+19175194 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATATAATTATATATTT+TGG | - | chr2.4:19175484-19175503 | MS.gene065256:intron | 0.0% |
| !! | AAATAAATAATAATGTAATG+AGG | - | chr2.4:19174473-19174492 | MS.gene065256:CDS | 10.0% |
| !! | TAAATCTAAATATCAAGTTA+AGG | + | chr2.4:19174453-19174472 | None:intergenic | 15.0% |
| !!! | CATGAATTTTTTTTTCAATA+TGG | - | chr2.4:19174877-19174896 | MS.gene065256:CDS | 15.0% |
| !!! | TAAAAATCTATTTTCTTTTG+TGG | - | chr2.4:19174512-19174531 | MS.gene065256:CDS | 15.0% |
| !! | AAGAAATCATTGTTTATAGT+TGG | - | chr2.4:19174946-19174965 | MS.gene065256:CDS | 20.0% |
| !! | AAGTATATTATCTTAACTTC+AGG | + | chr2.4:19175403-19175422 | None:intergenic | 20.0% |
| !! | AGTATATTATCTTAACTTCA+GGG | + | chr2.4:19175402-19175421 | None:intergenic | 20.0% |
| !! | ATCAATCAAATTAATTATGC+AGG | - | chr2.4:19175583-19175602 | MS.gene065256:CDS | 20.0% |
| !! | CATGCATAAATGAAATAAAA+AGG | + | chr2.4:19175555-19175574 | None:intergenic | 20.0% |
| !! | GAAATAAAAAGGAATAATTG+TGG | + | chr2.4:19175544-19175563 | None:intergenic | 20.0% |
| !! | TACATACAATCTACAAAATA+TGG | - | chr2.4:19174420-19174439 | MS.gene065256:intron | 20.0% |
| !! | TTGAGTATTATGTCAAAAAT+GGG | - | chr2.4:19174713-19174732 | MS.gene065256:intron | 20.0% |
| !!! | GTTTTATTGCAATTAAGTTT+TGG | - | chr2.4:19175079-19175098 | MS.gene065256:intron | 20.0% |
| !!! | TTGTTTCTTATTCTTATCAT+TGG | + | chr2.4:19174389-19174408 | None:intergenic | 20.0% |
| ! | AAAAAAAATTCCACTGCTTA+TGG | + | chr2.4:19174836-19174855 | None:intergenic | 25.0% |
| ! | AAAGAAGACTATGATGAATT+TGG | - | chr2.4:19175295-19175314 | MS.gene065256:intron | 25.0% |
| ! | AAAGACCATGATATCAAAAA+AGG | - | chr2.4:19174652-19174671 | MS.gene065256:CDS | 25.0% |
| ! | AAGAAGACTATGATGAATTT+GGG | - | chr2.4:19175296-19175315 | MS.gene065256:intron | 25.0% |
| ! | AATTTAGTCGAGTACTTTAA+TGG | - | chr2.4:19175337-19175356 | MS.gene065256:intron | 25.0% |
| ! | ATCCTTCAAAACGTATAAAT+TGG | - | chr2.4:19175677-19175696 | MS.gene065256:CDS | 25.0% |
| ! | ATTTAGTCGAGTACTTTAAT+GGG | - | chr2.4:19175338-19175357 | MS.gene065256:intron | 25.0% |
| ! | CAAAGAGAAATATCATTGAT+TGG | - | chr2.4:19175128-19175147 | MS.gene065256:CDS | 25.0% |
| ! | CTTATAAGCTAATAGCAAAA+GGG | - | chr2.4:19175725-19175744 | MS.gene065256:CDS | 25.0% |
| ! | GTTGAGTATTATGTCAAAAA+TGG | - | chr2.4:19174712-19174731 | MS.gene065256:intron | 25.0% |
| ! | TCCTTCAAAACGTATAAATT+GGG | - | chr2.4:19175678-19175697 | MS.gene065256:CDS | 25.0% |
| ! | TGCAATAAAACATACATTTG+TGG | + | chr2.4:19175070-19175089 | None:intergenic | 25.0% |
| ! | TTAAAGTAAGTAGAACCATA+AGG | + | chr2.4:19174275-19174294 | None:intergenic | 25.0% |
| ! | TTAAGAGAAGGATTTGAAAA+TGG | + | chr2.4:19175763-19175782 | None:intergenic | 25.0% |
| ! | TTGTTTATAGTTGGAGAAAT+TGG | - | chr2.4:19174955-19174974 | MS.gene065256:CDS | 25.0% |
| !! | TATGAAGCTTTCTTTAACTT+TGG | - | chr2.4:19174188-19174207 | MS.gene065256:CDS | 25.0% |
| !!! | TAATTATGCAGGTTTTGATA+AGG | - | chr2.4:19175594-19175613 | MS.gene065256:CDS | 25.0% |
| !!! | TTACTCCTTTTTTGATATCA+TGG | + | chr2.4:19174660-19174679 | None:intergenic | 25.0% |
| AAGTAGAACCATAAGGAATA+GGG | + | chr2.4:19174268-19174287 | None:intergenic | 30.0% | |
| ACTTACTTTAAACATCCTTC+AGG | - | chr2.4:19174284-19174303 | MS.gene065256:CDS | 30.0% | |
| CTCAATGAGTTATTTGTATC+TGG | + | chr2.4:19174748-19174767 | None:intergenic | 30.0% | |
| GCTTATAAGCTAATAGCAAA+AGG | - | chr2.4:19175724-19175743 | MS.gene065256:CDS | 30.0% | |
| GTCTTTGCTTTCATTCTTAA+AGG | + | chr2.4:19174638-19174657 | None:intergenic | 30.0% | |
| TAAGTAGAACCATAAGGAAT+AGG | + | chr2.4:19174269-19174288 | None:intergenic | 30.0% | |
| TATCAAACACCACAACAATA+TGG | - | chr2.4:19175451-19175470 | MS.gene065256:intron | 30.0% | |
| TCAAAACGTATAAATTGGGA+CGG | - | chr2.4:19175682-19175701 | MS.gene065256:CDS | 30.0% | |
| TGGTGTTTGATATAAACGTT+TGG | + | chr2.4:19175443-19175462 | None:intergenic | 30.0% | |
| TTATAGTTGGAGAAATTGGT+GGG | - | chr2.4:19174959-19174978 | MS.gene065256:CDS | 30.0% | |
| TTTATAGTTGGAGAAATTGG+TGG | - | chr2.4:19174958-19174977 | MS.gene065256:CDS | 30.0% | |
| TTTCATTTATGCATGCTTAC+TGG | - | chr2.4:19175560-19175579 | MS.gene065256:intron | 30.0% | |
| ! | ATTTTCAAAGTATGTTGTGG+AGG | - | chr2.4:19175622-19175641 | MS.gene065256:CDS | 30.0% |
| ! | CGACTGATCATAGATTTTAT+TGG | - | chr2.4:19174323-19174342 | MS.gene065256:intron | 30.0% |
| ! | TACATTTGTGGTGTTAGTAA+TGG | + | chr2.4:19175058-19175077 | None:intergenic | 30.0% |
| ! | TCCCAATTTATACGTTTTGA+AGG | + | chr2.4:19175682-19175701 | None:intergenic | 30.0% |
| !! | CTAAGCTATTTTGAAAAGAG+GGG | + | chr2.4:19175788-19175807 | None:intergenic | 30.0% |
| !! | GCTATTTTCAAAGTATGTTG+TGG | - | chr2.4:19175619-19175638 | MS.gene065256:CDS | 30.0% |
| !!! | CAATGTCACATTTTTTCACA+CGG | + | chr2.4:19175159-19175178 | None:intergenic | 30.0% |
| !!! | TGATTTTGTTTCTATGTGCT+AGG | - | chr2.4:19175177-19175196 | MS.gene065256:CDS | 30.0% |
| AAAAGAGGGGATTTAAGAGA+AGG | + | chr2.4:19175775-19175794 | None:intergenic | 35.0% | |
| AACTCATTGAGCATTCAACT+TGG | - | chr2.4:19174757-19174776 | MS.gene065256:intron | 35.0% | |
| AAGAAAGCTTCATATGAGAG+AGG | + | chr2.4:19174182-19174201 | None:intergenic | 35.0% | |
| AGTAATGGCTTCAACCATAA+AGG | + | chr2.4:19175043-19175062 | None:intergenic | 35.0% | |
| ATACTCAACATTGAGTACAG+TGG | + | chr2.4:19174701-19174720 | None:intergenic | 35.0% | |
| GAGTTATTTGTATCTGGAAG+AGG | + | chr2.4:19174742-19174761 | None:intergenic | 35.0% | |
| GTAATGGCTTCAACCATAAA+GGG | + | chr2.4:19175042-19175061 | None:intergenic | 35.0% | |
| TCGAGAAATAGTTCCCTTTA+TGG | - | chr2.4:19175026-19175045 | MS.gene065256:intron | 35.0% | |
| TTCTTAAAGGCAGGCAAAAA+AGG | + | chr2.4:19174625-19174644 | None:intergenic | 35.0% | |
| TTGCTTTCATTCTTAAAGGC+AGG | + | chr2.4:19174634-19174653 | None:intergenic | 35.0% | |
| TTGTAGAAAACCACATGTGA+AGG | + | chr2.4:19174138-19174157 | None:intergenic | 35.0% | |
| ! | GGAGTAAATTTTGCATTTGC+TGG | - | chr2.4:19174673-19174692 | MS.gene065256:CDS | 35.0% |
| !! | AACCTTCTTTGCTTTTACAG+AGG | + | chr2.4:19174810-19174829 | None:intergenic | 35.0% |
| !! | TTCTTTGCTTTTACAGAGGA+GGG | + | chr2.4:19174806-19174825 | None:intergenic | 35.0% |
| AAAGTATGTTGTGGAGGATG+TGG | - | chr2.4:19175628-19175647 | MS.gene065256:CDS | 40.0% | |
| ATGCCTAACCCTATTCCTTA+TGG | - | chr2.4:19174257-19174276 | MS.gene065256:CDS | 40.0% | |
| CATTGAGCATTCAACTTGGA+TGG | - | chr2.4:19174761-19174780 | MS.gene065256:intron | 40.0% | |
| CTCCTCTGTAAAAGCAAAGA+AGG | - | chr2.4:19174805-19174824 | MS.gene065256:intron | 40.0% | |
| GAACCATAAGGAATAGGGTT+AGG | + | chr2.4:19174263-19174282 | None:intergenic | 40.0% | |
| GATCATTTCAATTGTAGCCG+AGG | - | chr2.4:19174588-19174607 | MS.gene065256:CDS | 40.0% | |
| GGTGATTCAATAAGTGACAC+TGG | - | chr2.4:19174209-19174228 | MS.gene065256:CDS | 40.0% | |
| TAAGCTGCTTCAGTAAAGTG+AGG | + | chr2.4:19175709-19175728 | None:intergenic | 40.0% | |
| TAAGGAATAGGGTTAGGCAT+AGG | + | chr2.4:19174257-19174276 | None:intergenic | 40.0% | |
| TTCTTCATCACCTTCACATG+TGG | - | chr2.4:19174125-19174144 | MS.gene065256:CDS | 40.0% | |
| ! | GAAGGTTTTACCATAAGCAG+TGG | - | chr2.4:19174823-19174842 | MS.gene065256:intron | 40.0% |
| !! | AATAGCAAAAGGGCTAGTTG+AGG | - | chr2.4:19175735-19175754 | MS.gene065256:CDS | 40.0% |
| !! | ATAGCAAAAGGGCTAGTTGA+GGG | - | chr2.4:19175736-19175755 | MS.gene065256:CDS | 40.0% |
| !! | CTTCTTTGCTTTTACAGAGG+AGG | + | chr2.4:19174807-19174826 | None:intergenic | 40.0% |
| !! | TCTTTGCTTTTACAGAGGAG+GGG | + | chr2.4:19174805-19174824 | None:intergenic | 40.0% |
| AAAAGGCAACCCATATGCCT+CGG | + | chr2.4:19174608-19174627 | None:intergenic | 45.0% | |
| CAATTGTAGCCGAGGCATAT+GGG | - | chr2.4:19174596-19174615 | MS.gene065256:CDS | 45.0% | |
| CACCACAACAATATGGTGAG+CGG | - | chr2.4:19175458-19175477 | MS.gene065256:intron | 45.0% | |
| CCATTTGACATACGTCCTGA+AGG | + | chr2.4:19174302-19174321 | None:intergenic | 45.0% | |
| CCTTCAGGACGTATGTCAAA+TGG | - | chr2.4:19174299-19174318 | MS.gene065256:intron | 45.0% | |
| GGAAATGCTGCGTTTGTCTA+CGG | - | chr2.4:19174230-19174249 | MS.gene065256:CDS | 45.0% | |
| TACCGCTCACCATATTGTTG+TGG | + | chr2.4:19175463-19175482 | None:intergenic | 45.0% | |
| TCAATTGTAGCCGAGGCATA+TGG | - | chr2.4:19174595-19174614 | MS.gene065256:CDS | 45.0% | |
| TGCTAGGTGCTAATCGAAGA+AGG | - | chr2.4:19175193-19175212 | MS.gene065256:CDS | 45.0% | |
| ! | CAGTGCTGGAACATTGACAT+CGG | - | chr2.4:19175258-19175277 | MS.gene065256:CDS | 45.0% |
| AGAAGGAGCTGTAGAGCTAG+TGG | - | chr2.4:19175210-19175229 | MS.gene065256:CDS | 50.0% | |
| ! | GTGCCTGGGAATTTTCCGAT+GGG | - | chr2.4:19175232-19175251 | MS.gene065256:CDS | 50.0% |
| ! | TGCCTGGGAATTTTCCGATG+GGG | - | chr2.4:19175233-19175252 | MS.gene065256:CDS | 50.0% |
| CACCCCATCGGAAAATTCCC+AGG | + | chr2.4:19175238-19175257 | None:intergenic | 55.0% | |
| CTGTAGAGCTAGTGGTGCCT+GGG | - | chr2.4:19175218-19175237 | MS.gene065256:CDS | 55.0% | |
| ! | GGTGCCTGGGAATTTTCCGA+TGG | - | chr2.4:19175231-19175250 | MS.gene065256:CDS | 55.0% |
| GCTGTAGAGCTAGTGGTGCC+TGG | - | chr2.4:19175217-19175236 | MS.gene065256:CDS | 60.0% | |
| GTTCCAGCACTGCACCCCAT+CGG | + | chr2.4:19175250-19175269 | None:intergenic | 60.0% | |
| TTTCCGATGGGGTGCAGTGC+TGG | - | chr2.4:19175244-19175263 | MS.gene065256:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 19174107 | 19175807 | 19174107 | ID=MS.gene065256 |
| chr2.4 | mRNA | 19174107 | 19175807 | 19174107 | ID=MS.gene065256.t1;Parent=MS.gene065256 |
| chr2.4 | exon | 19175570 | 19175807 | 19175570 | ID=MS.gene065256.t1.exon1;Parent=MS.gene065256.t1 |
| chr2.4 | CDS | 19175570 | 19175807 | 19175570 | ID=cds.MS.gene065256.t1;Parent=MS.gene065256.t1 |
| chr2.4 | exon | 19175088 | 19175309 | 19175088 | ID=MS.gene065256.t1.exon2;Parent=MS.gene065256.t1 |
| chr2.4 | CDS | 19175088 | 19175309 | 19175088 | ID=cds.MS.gene065256.t1;Parent=MS.gene065256.t1 |
| chr2.4 | exon | 19174840 | 19174985 | 19174840 | ID=MS.gene065256.t1.exon3;Parent=MS.gene065256.t1 |
| chr2.4 | CDS | 19174840 | 19174985 | 19174840 | ID=cds.MS.gene065256.t1;Parent=MS.gene065256.t1 |
| chr2.4 | exon | 19174442 | 19174715 | 19174442 | ID=MS.gene065256.t1.exon4;Parent=MS.gene065256.t1 |
| chr2.4 | CDS | 19174442 | 19174715 | 19174442 | ID=cds.MS.gene065256.t1;Parent=MS.gene065256.t1 |
| chr2.4 | exon | 19174107 | 19174309 | 19174107 | ID=MS.gene065256.t1.exon5;Parent=MS.gene065256.t1 |
| chr2.4 | CDS | 19174107 | 19174309 | 19174107 | ID=cds.MS.gene065256.t1;Parent=MS.gene065256.t1 |
| Gene Sequence |
| Protein sequence |
