Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065806.t1 | XP_013468879.1 | 96.5 | 396 | 13 | 1 | 1 | 396 | 1 | 395 | 6.50E-225 | 789.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065806.t1 | Q9UKL6 | 24.9 | 177 | 118 | 5 | 133 | 303 | 46 | 213 | 7.0e-10 | 66.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065806.t1 | A0A072VMT6 | 96.5 | 396 | 13 | 1 | 1 | 396 | 1 | 395 | 4.7e-225 | 789.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053073 | MS.gene065806 | 0.810349 | 1.20E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene065806 | 0.803051 | 4.19E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene065806 | 0.806618 | 7.54E-50 | -1.69E-46 |
| MS.gene055254 | MS.gene065806 | 0.816877 | 4.41E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene065806 | 0.840759 | 7.16E-58 | -1.69E-46 |
| MS.gene060495 | MS.gene065806 | 0.811968 | 5.37E-51 | -1.69E-46 |
| MS.gene061051 | MS.gene065806 | -0.812631 | 3.85E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065806.t1 | MTR_1g078030 | 96.465 | 396 | 13 | 1 | 1 | 396 | 1 | 395 | 0.0 | 787 |
| MS.gene065806.t1 | MTR_3g092640 | 54.501 | 411 | 153 | 6 | 19 | 395 | 14 | 424 | 3.67e-161 | 459 |
| MS.gene065806.t1 | MTR_5g007030 | 42.518 | 421 | 202 | 7 | 9 | 391 | 17 | 435 | 7.38e-112 | 334 |
| MS.gene065806.t1 | MTR_5g007030 | 49.693 | 326 | 158 | 5 | 70 | 391 | 2 | 325 | 6.02e-108 | 320 |
| MS.gene065806.t1 | MTR_4g005140 | 30.450 | 289 | 182 | 7 | 92 | 369 | 71 | 351 | 7.19e-35 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065806.t1 | AT1G64720 | 61.658 | 386 | 129 | 5 | 13 | 396 | 17 | 385 | 5.17e-173 | 488 |
| MS.gene065806.t1 | AT5G54170 | 56.013 | 316 | 133 | 4 | 84 | 395 | 120 | 433 | 6.59e-123 | 363 |
| MS.gene065806.t1 | AT4G14500 | 45.411 | 414 | 185 | 8 | 15 | 391 | 23 | 432 | 2.20e-117 | 348 |
| MS.gene065806.t1 | AT3G23080 | 44.526 | 411 | 195 | 10 | 9 | 391 | 13 | 418 | 3.56e-108 | 324 |
| MS.gene065806.t1 | AT3G23080 | 45.663 | 392 | 180 | 10 | 28 | 391 | 1 | 387 | 1.96e-104 | 314 |
| MS.gene065806.t1 | AT3G23080 | 45.663 | 392 | 180 | 10 | 28 | 391 | 1 | 387 | 1.96e-104 | 314 |
| MS.gene065806.t1 | AT4G14500 | 40.964 | 249 | 109 | 6 | 21 | 231 | 29 | 277 | 1.31e-54 | 182 |
| MS.gene065806.t1 | AT3G13062 | 30.159 | 315 | 204 | 8 | 91 | 395 | 82 | 390 | 2.98e-39 | 145 |
| MS.gene065806.t1 | AT3G13062 | 30.159 | 315 | 204 | 8 | 91 | 395 | 82 | 390 | 5.03e-39 | 145 |
| MS.gene065806.t1 | AT3G13062 | 29.102 | 323 | 205 | 8 | 91 | 395 | 82 | 398 | 5.69e-37 | 139 |
| MS.gene065806.t1 | AT1G55960 | 31.270 | 307 | 190 | 9 | 78 | 369 | 68 | 368 | 1.17e-35 | 135 |
| MS.gene065806.t1 | AT1G55960 | 28.990 | 307 | 172 | 11 | 78 | 369 | 68 | 343 | 1.84e-23 | 101 |
Find 122 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCATAGGTCGTCGAATT+TGG | 0.185811 | 1.3:-55793891 | MS.gene065806:CDS |
| AGTTGGTTAGGGATTTCTTT+TGG | 0.205035 | 1.3:-55794145 | MS.gene065806:CDS |
| GTGACCAAGGCGGTTGTATT+TGG | 0.231338 | 1.3:-55792491 | MS.gene065806:CDS |
| TTGAGCCTAATAACTATTCT+TGG | 0.254030 | 1.3:-55795709 | MS.gene065806:CDS |
| GTTCTTTCACTATGAAGATA+TGG | 0.258130 | 1.3:-55792828 | MS.gene065806:CDS |
| GAATTCCTTTGTTGTTGTTA+TGG | 0.286629 | 1.3:-55795828 | MS.gene065806:CDS |
| TAATATAGATCTACCCGTTT+AGG | 0.290502 | 1.3:+55793411 | None:intergenic |
| GTACTCCAAGAATAGTTATT+AGG | 0.298005 | 1.3:+55795704 | None:intergenic |
| TGTTGTTGTTATGGATATCT+TGG | 0.306159 | 1.3:-55795819 | MS.gene065806:CDS |
| ATTAGGCTCAATAGCCCATT+TGG | 0.314280 | 1.3:+55795721 | None:intergenic |
| CTTGCCTGCACCCTTGATCA+AGG | 0.320705 | 1.3:-55792518 | MS.gene065806:CDS |
| CGCTAAGCTTGGAGTTCGTC+AGG | 0.333843 | 1.3:-55792789 | MS.gene065806:CDS |
| GCTTCAAAACCAACCTGGTT+TGG | 0.345626 | 1.3:-55795639 | MS.gene065806:CDS |
| CATGTCACGTGCAGTTCTTC+TGG | 0.349830 | 1.3:-55795439 | MS.gene065806:intron |
| ATGCGAGTCCTGAGTTGGTT+AGG | 0.358805 | 1.3:-55794157 | MS.gene065806:CDS |
| TTCAGTCTCCAACAGGTTAC+CGG | 0.359683 | 1.3:+55792616 | None:intergenic |
| CTTTGGATTGCTGTTATCTT+CGG | 0.360253 | 1.3:-55795770 | MS.gene065806:CDS |
| TATCATAGGTCGTCGAATTT+GGG | 0.370573 | 1.3:-55793890 | MS.gene065806:CDS |
| TTCTTTCACTATGAAGATAT+GGG | 0.383405 | 1.3:-55792827 | MS.gene065806:CDS |
| CCTGTTGGAGACTGAAAATC+AGG | 0.397121 | 1.3:-55792609 | MS.gene065806:CDS |
| GCCCGACGGTTTGGAAAATT+CGG | 0.400471 | 1.3:-55792464 | MS.gene065806:CDS |
| TTTGGAATAGCCCGACGGTT+TGG | 0.406644 | 1.3:-55792473 | MS.gene065806:CDS |
| GTGTTGTTGTTGGTTGGGCT+TGG | 0.406854 | 1.3:-55795748 | MS.gene065806:CDS |
| GTTGTTGTTATGGATATCTT+GGG | 0.415623 | 1.3:-55795818 | MS.gene065806:CDS |
| TATAAGAAAGAAAGGGATTC+CGG | 0.417822 | 1.3:-55792722 | MS.gene065806:CDS |
| CGTTTAGGTTTGCTCTGCCT+TGG | 0.417964 | 1.3:+55793426 | None:intergenic |
| CTTCGGTGTTGTTGTTGGTT+GGG | 0.423403 | 1.3:-55795753 | MS.gene065806:CDS |
| TTCTCTATCACTGCAAAAGA+AGG | 0.424377 | 1.3:+55793915 | None:intergenic |
| AGGTTTGCTCTGCCTTGGTA+TGG | 0.426290 | 1.3:+55793431 | None:intergenic |
| CAAGGCAGAGCAAACCTAAA+CGG | 0.429915 | 1.3:-55793425 | MS.gene065806:CDS |
| TCTTCGGTGTTGTTGTTGGT+TGG | 0.430475 | 1.3:-55795754 | MS.gene065806:CDS |
| ATACCTAAGCTTCTAGTTGT+TGG | 0.433725 | 1.3:-55792554 | MS.gene065806:CDS |
| TTTGCAAAATTTGTGTAAGT+TGG | 0.443993 | 1.3:-55795371 | MS.gene065806:CDS |
| CAAGCTTGGTAAGTCATGTT+TGG | 0.447227 | 1.3:+55795295 | None:intergenic |
| GTTGGGCTTGGAAACCCAAA+TGG | 0.449819 | 1.3:-55795736 | MS.gene065806:CDS |
| TTAGGCTCAATAGCCCATTT+GGG | 0.450902 | 1.3:+55795722 | None:intergenic |
| TGGTCACTAGCCCTTGATCA+AGG | 0.452319 | 1.3:+55792507 | None:intergenic |
| TTGGAGTTCGTCAGGGTATG+TGG | 0.453950 | 1.3:-55792781 | MS.gene065806:CDS |
| GTTATCTTCGGTGTTGTTGT+TGG | 0.454908 | 1.3:-55795758 | MS.gene065806:CDS |
| TCTTCAAGTTTCGAATTCCT+TGG | 0.455904 | 1.3:-55795676 | MS.gene065806:CDS |
| CAAAATTTGTGTAAGTTGGT+TGG | 0.456209 | 1.3:-55795367 | MS.gene065806:CDS |
| TACGTACGTATAAGAAAGAA+AGG | 0.462465 | 1.3:-55792730 | MS.gene065806:CDS |
| AAGGCAGAGCAAACCTAAAC+GGG | 0.465305 | 1.3:-55793424 | MS.gene065806:CDS |
| TTCTGGTGGTGAAAGTGAAA+AGG | 0.469810 | 1.3:-55795422 | MS.gene065806:CDS |
| TGCGAGTCCTGAGTTGGTTA+GGG | 0.472434 | 1.3:-55794156 | MS.gene065806:CDS |
| CTTGATCAAGGGTGCAGGCA+AGG | 0.479777 | 1.3:+55792519 | None:intergenic |
| TCTGGTGGTGAAAGTGAAAA+GGG | 0.485541 | 1.3:-55795421 | MS.gene065806:CDS |
| TTCTTATACGTACGTAGTCC+AGG | 0.487357 | 1.3:+55792737 | None:intergenic |
| ATGAAGATATGGGCATACCT+TGG | 0.492383 | 1.3:-55792817 | MS.gene065806:CDS |
| CCGCCAACAACTAGAAGCTT+AGG | 0.492437 | 1.3:+55792551 | None:intergenic |
| CCAGTTAAATCAAGAAAAGA+TGG | 0.498146 | 1.3:-55792875 | MS.gene065806:intron |
| TGAAGATATGGGCATACCTT+GGG | 0.500114 | 1.3:-55792816 | MS.gene065806:CDS |
| TCCAGGATCAAACTTCTTGA+CGG | 0.500862 | 1.3:+55792754 | None:intergenic |
| GCCGTCAAGAAGTTTGATCC+TGG | 0.503459 | 1.3:-55792755 | MS.gene065806:CDS |
| AACTTACTACTGTGTGACTA+AGG | 0.511110 | 1.3:-55793857 | MS.gene065806:intron |
| TTACGTTCATAGCTCCACTT+TGG | 0.512161 | 1.3:-55795787 | MS.gene065806:CDS |
| CTTCTGATGACAAACCGATC+GGG | 0.515089 | 1.3:-55792583 | MS.gene065806:CDS |
| ACCAGCTTGGATTCAGATGA+TGG | 0.516098 | 1.3:-55795329 | MS.gene065806:CDS |
| TTTGCTCTGCCTTGGTATGG+AGG | 0.518246 | 1.3:+55793434 | None:intergenic |
| TTGCCTGCACCCTTGATCAA+GGG | 0.518780 | 1.3:-55792517 | MS.gene065806:CDS |
| CCTTGGGAAATCGCTAAGCT+TGG | 0.519071 | 1.3:-55792800 | MS.gene065806:CDS |
| CCTAAGCTTCTAGTTGTTGG+CGG | 0.520168 | 1.3:-55792551 | MS.gene065806:CDS |
| TGGAGTTCGTCAGGGTATGT+GGG | 0.522164 | 1.3:-55792780 | MS.gene065806:CDS |
| ATTCAAGAGTGTGAGGTCAC+TGG | 0.523985 | 1.3:-55794071 | MS.gene065806:CDS |
| TTGATCAAGGGTGCAGGCAA+GGG | 0.525896 | 1.3:+55792520 | None:intergenic |
| CTTGGTCCCTACGCCAAGCT+TGG | 0.528324 | 1.3:+55795281 | None:intergenic |
| TTAGGTATGCTTCTCCCGAT+CGG | 0.542706 | 1.3:+55792569 | None:intergenic |
| CAAACATGACTTACCAAGCT+TGG | 0.544826 | 1.3:-55795294 | MS.gene065806:CDS |
| GGTCACTAGCCCTTGATCAA+GGG | 0.548340 | 1.3:+55792508 | None:intergenic |
| AGTGATAGAGAATATATCAT+AGG | 0.553664 | 1.3:-55793904 | MS.gene065806:CDS |
| GGGATGATGAGTTTCGGTCG+AGG | 0.555696 | 1.3:-55794124 | MS.gene065806:CDS |
| TAGCCCTTGATCAAGGGTGC+AGG | 0.555894 | 1.3:+55792514 | None:intergenic |
| TTGGGCTTGGAAACCCAAAT+GGG | 0.556004 | 1.3:-55795735 | MS.gene065806:CDS |
| GTTTGGAATACTCCGCAACC+AGG | 0.561804 | 1.3:-55795622 | MS.gene065806:intron |
| AAGGGTGCAGGCAAGGGCAA+TGG | 0.563247 | 1.3:+55792526 | None:intergenic |
| GTGAAAGTGAAAAGGGATTG+AGG | 0.563385 | 1.3:-55795414 | MS.gene065806:CDS |
| TGATGAGTTTCGGTCGAGGT+GGG | 0.565414 | 1.3:-55794120 | MS.gene065806:CDS |
| GACTTACCAAGCTTGGCGTA+GGG | 0.568038 | 1.3:-55795287 | MS.gene065806:CDS |
| GACGGTTTGGAAAATTCGGA+AGG | 0.568472 | 1.3:-55792460 | MS.gene065806:CDS |
| AAGAAATCCCTAACCAACTC+AGG | 0.569522 | 1.3:+55794149 | None:intergenic |
| ACACTTCACATGAAGTCAGC+TGG | 0.570067 | 1.3:+55792852 | None:intergenic |
| TGACTTACCAAGCTTGGCGT+AGG | 0.571589 | 1.3:-55795288 | MS.gene065806:CDS |
| CGGAGTATTCCAAACCAGGT+TGG | 0.575515 | 1.3:+55795630 | None:intergenic |
| ATGATGAGTTTCGGTCGAGG+TGG | 0.576909 | 1.3:-55794121 | MS.gene065806:CDS |
| TCCATCATCTGAATCCAAGC+TGG | 0.578196 | 1.3:+55795328 | None:intergenic |
| TATTCCAAATACAACCGCCT+TGG | 0.579315 | 1.3:+55792487 | None:intergenic |
| TCTCTATCACTGCAAAAGAA+GGG | 0.579682 | 1.3:+55793916 | None:intergenic |
| AGACTCGACCGGTAACCTGT+TGG | 0.583874 | 1.3:-55792624 | MS.gene065806:CDS |
| TCTTCTGATGACAAACCGAT+CGG | 0.596047 | 1.3:-55792584 | MS.gene065806:CDS |
| GGTTTGGAAAATTCGGAAGG+AGG | 0.596932 | 1.3:-55792457 | MS.gene065806:CDS |
| GTTGCGGAGTATTCCAAACC+AGG | 0.600622 | 1.3:+55795626 | None:intergenic |
| AAGATAACAGCAATCCAAAG+TGG | 0.602074 | 1.3:+55795773 | None:intergenic |
| TGAAGATGCGAGTCCTGAGT+TGG | 0.613594 | 1.3:-55794162 | MS.gene065806:CDS |
| TCAGAGCTTCAAAACCAACC+TGG | 0.614875 | 1.3:-55795644 | MS.gene065806:CDS |
| CCAAGCTTAGCGATTTCCCA+AGG | 0.615945 | 1.3:+55792800 | None:intergenic |
| GATGGTGCAGTGGGTGCGCA+AGG | 0.620411 | 1.3:-55794042 | MS.gene065806:intron |
| TAAACTGTCAATTACCTGCA+CGG | 0.621201 | 1.3:+55793373 | None:intergenic |
| ACGTACGTATAAGAAAGAAA+GGG | 0.623052 | 1.3:-55792729 | MS.gene065806:CDS |
| CTGGAACAATGATGGTGCAG+TGG | 0.625357 | 1.3:-55794052 | MS.gene065806:CDS |
| GATATCCATAACAACAACAA+AGG | 0.628535 | 1.3:+55795823 | None:intergenic |
| TGAGGTCACTGGAACAATGA+TGG | 0.628803 | 1.3:-55794060 | MS.gene065806:CDS |
| AGATCTGTGGAAGACTCGAC+CGG | 0.630222 | 1.3:-55792635 | MS.gene065806:CDS |
| TTATTAGCACATGCTGACAA+TGG | 0.637025 | 1.3:+55792695 | None:intergenic |
| TGATCAAGGGCTAGTGACCA+AGG | 0.638516 | 1.3:-55792504 | MS.gene065806:CDS |
| GGGATTGAGGAGTATAGTGA+CGG | 0.640769 | 1.3:-55795401 | MS.gene065806:CDS |
| GTCACGTGCAGTTCTTCTGG+TGG | 0.640922 | 1.3:-55795436 | MS.gene065806:intron |
| ACCGTTCTACTGCGATACTG+TGG | 0.641157 | 1.3:+55794188 | None:intergenic |
| TTCAACTATTCAAGAGTGTG+AGG | 0.641287 | 1.3:-55794078 | MS.gene065806:CDS |
| ACCACAGTATCGCAGTAGAA+CGG | 0.641569 | 1.3:-55794189 | MS.gene065806:CDS |
| TGGAACAATGATGGTGCAGT+GGG | 0.643324 | 1.3:-55794051 | MS.gene065806:CDS |
| GTTCTACTGCGATACTGTGG+TGG | 0.646637 | 1.3:+55794191 | None:intergenic |
| GGAGTTCGTCAGGGTATGTG+GGG | 0.647398 | 1.3:-55792779 | MS.gene065806:CDS |
| AGCTTGGCGTAGGGACCAAG+AGG | 0.653449 | 1.3:-55795278 | MS.gene065806:intron |
| GTGGAGCTATGAACGTAACA+AGG | 0.654092 | 1.3:+55795792 | None:intergenic |
| AGCTCTGAATCATTAAACCA+AGG | 0.662274 | 1.3:+55795659 | None:intergenic |
| ACATGCTGACAATGGAACGC+CGG | 0.666475 | 1.3:+55792703 | None:intergenic |
| TACCTTGTTCCTCCATACCA+AGG | 0.669373 | 1.3:-55793443 | MS.gene065806:CDS |
| GCTAAGCTTGGAGTTCGTCA+GGG | 0.670012 | 1.3:-55792788 | MS.gene065806:CDS |
| TGCTGATTACGTGAGATCTG+TGG | 0.675039 | 1.3:-55792648 | MS.gene065806:CDS |
| TTGTATTTGGAATAGCCCGA+CGG | 0.676217 | 1.3:-55792478 | MS.gene065806:CDS |
| TGCCTTGGTATGGAGGAACA+AGG | 0.712864 | 1.3:+55793441 | None:intergenic |
| TCAAGGGCTAGTGACCAAGG+CGG | 0.799326 | 1.3:-55792501 | MS.gene065806:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATTATAGTC+TGG | - | chr1.3:55793239-55793258 | MS.gene065806:intron | 10.0% |
| !! | TAATAGCTAATATATTAAAT+AGG | + | chr1.3:55794733-55794752 | None:intergenic | 10.0% |
| !! | TTGTAAAATAGAATTTAAAT+AGG | + | chr1.3:55793576-55793595 | None:intergenic | 10.0% |
| !! | TTTATTACTATTACTATTAT+TGG | + | chr1.3:55793691-55793710 | None:intergenic | 10.0% |
| !! | AATAATAATTCAATGAAATC+AGG | + | chr1.3:55793046-55793065 | None:intergenic | 15.0% |
| !! | ATAATTTAAGCAACTAAAAT+TGG | + | chr1.3:55793121-55793140 | None:intergenic | 15.0% |
| !! | CTTATTAATTTAAGTAATTG+CGG | - | chr1.3:55795344-55795363 | MS.gene065806:CDS | 15.0% |
| !! | GTTTAAATTATTGAAAATGT+TGG | - | chr1.3:55793629-55793648 | MS.gene065806:intron | 15.0% |
| !!! | CACTATTTAAATATTGATTT+AGG | - | chr1.3:55793599-55793618 | MS.gene065806:intron | 15.0% |
| !!! | CATTTTACATTTATTTTAGT+AGG | - | chr1.3:55793716-55793735 | MS.gene065806:intron | 15.0% |
| !! | AATTTAGTTGCTAAAATTGT+AGG | + | chr1.3:55794020-55794039 | None:intergenic | 20.0% |
| !! | ATTTAGTTGCTAAAATTGTA+GGG | + | chr1.3:55794019-55794038 | None:intergenic | 20.0% |
| !! | TAAGAATTTAATGATTCCTT+TGG | + | chr1.3:55795328-55795347 | None:intergenic | 20.0% |
| !! | TTTCATCAACATTGTTATAA+TGG | - | chr1.3:55794588-55794607 | MS.gene065806:intron | 20.0% |
| !!! | CAATTCATTTTTCTTAATCT+TGG | - | chr1.3:55795066-55795085 | MS.gene065806:intron | 20.0% |
| !!! | CATTTTTTTTCTTTTCTACA+TGG | - | chr1.3:55795298-55795317 | MS.gene065806:CDS | 20.0% |
| ! | AACATTGTACATATACACAT+TGG | + | chr1.3:55795036-55795055 | None:intergenic | 25.0% |
| ! | AATGATATTAAAAACGAACC+TGG | + | chr1.3:55792686-55792705 | None:intergenic | 25.0% |
| ! | ACTCTATAAAGTCAAAAGAA+TGG | + | chr1.3:55794508-55794527 | None:intergenic | 25.0% |
| ! | ACTGATATAGATCAAAATAG+GGG | + | chr1.3:55793887-55793906 | None:intergenic | 25.0% |
| ! | AGCGTATTAAACTAACTTAT+CGG | - | chr1.3:55794690-55794709 | MS.gene065806:intron | 25.0% |
| ! | AGTGATAGAGAATATATCAT+AGG | - | chr1.3:55794383-55794402 | MS.gene065806:intron | 25.0% |
| ! | ATGTGGTTATTGTTTCATAT+GGG | - | chr1.3:55792768-55792787 | MS.gene065806:CDS | 25.0% |
| ! | CAATATTATGGAGAAAATTG+AGG | + | chr1.3:55795204-55795223 | None:intergenic | 25.0% |
| ! | CTCTATAAAGTCAAAAGAAT+GGG | + | chr1.3:55794507-55794526 | None:intergenic | 25.0% |
| ! | GACTGATATAGATCAAAATA+GGG | + | chr1.3:55793888-55793907 | None:intergenic | 25.0% |
| ! | GTTTCATATGAATGATAGAA+CGG | - | chr1.3:55795248-55795267 | MS.gene065806:intron | 25.0% |
| ! | TATTTATCCTAAGTTGTTCT+CGG | + | chr1.3:55793213-55793232 | None:intergenic | 25.0% |
| ! | TGTGTACATATTGAAACTAT+CGG | - | chr1.3:55794989-55795008 | MS.gene065806:intron | 25.0% |
| ! | TTCTCCATAATATTGTTAAC+TGG | - | chr1.3:55795209-55795228 | MS.gene065806:intron | 25.0% |
| ! | TTCTTTCACTATGAAGATAT+GGG | - | chr1.3:55795460-55795479 | MS.gene065806:intron | 25.0% |
| ! | TTTCATATGAATGATAGAAC+GGG | - | chr1.3:55795249-55795268 | MS.gene065806:intron | 25.0% |
| ! | TTTGCAAAATTTGTGTAAGT+TGG | - | chr1.3:55792916-55792935 | MS.gene065806:intron | 25.0% |
| !! | AATTTTACGGATCAATTGAT+TGG | + | chr1.3:55793919-55793938 | None:intergenic | 25.0% |
| !! | AATTTTCTCAATCTTTTGAG+AGG | - | chr1.3:55794765-55794784 | MS.gene065806:intron | 25.0% |
| !! | TTTTTCTTAATCTTGGTCAT+TGG | - | chr1.3:55795073-55795092 | MS.gene065806:intron | 25.0% |
| !!! | ATTGGATTAGATTTTGTATG+TGG | + | chr1.3:55793673-55793692 | None:intergenic | 25.0% |
| !!! | GTTACTTTTGTTTGTTAGAA+TGG | - | chr1.3:55794072-55794091 | MS.gene065806:CDS | 25.0% |
| !!! | TAGCATAGTAGAATTTTGAT+AGG | - | chr1.3:55795129-55795148 | MS.gene065806:intron | 25.0% |
| !!! | TGGTTTTTAGTAACATTTGA+CGG | - | chr1.3:55794660-55794679 | MS.gene065806:intron | 25.0% |
| !!! | TTACATTTATTTTAGTAGGC+CGG | - | chr1.3:55793720-55793739 | MS.gene065806:intron | 25.0% |
| !!! | TTATATTTCTAGTCAACTTG+TGG | - | chr1.3:55794799-55794818 | MS.gene065806:intron | 25.0% |
| AATCATTTGTACCAATTGCA+AGG | + | chr1.3:55795177-55795196 | None:intergenic | 30.0% | |
| AATTATAGTCTGGTATGACT+TGG | - | chr1.3:55793249-55793268 | MS.gene065806:intron | 30.0% | |
| ACGTACGTATAAGAAAGAAA+GGG | - | chr1.3:55795558-55795577 | MS.gene065806:intron | 30.0% | |
| CATGTGGTTATTGTTTCATA+TGG | - | chr1.3:55792767-55792786 | MS.gene065806:CDS | 30.0% | |
| CCAGTTAAATCAAGAAAAGA+TGG | - | chr1.3:55795412-55795431 | MS.gene065806:CDS | 30.0% | |
| GATATCCATAACAACAACAA+AGG | + | chr1.3:55792467-55792486 | None:intergenic | 30.0% | |
| GATCAATTGATTGGTACAAA+AGG | + | chr1.3:55793910-55793929 | None:intergenic | 30.0% | |
| GATGCCAGTTAACAATATTA+TGG | + | chr1.3:55795216-55795235 | None:intergenic | 30.0% | |
| GGACTGATATAGATCAAAAT+AGG | + | chr1.3:55793889-55793908 | None:intergenic | 30.0% | |
| GTACTCCAAGAATAGTTATT+AGG | + | chr1.3:55792586-55792605 | None:intergenic | 30.0% | |
| GTTCTTTCACTATGAAGATA+TGG | - | chr1.3:55795459-55795478 | MS.gene065806:intron | 30.0% | |
| TAATATAGATCTACCCGTTT+AGG | + | chr1.3:55794879-55794898 | None:intergenic | 30.0% | |
| TACGTACGTATAAGAAAGAA+AGG | - | chr1.3:55795557-55795576 | MS.gene065806:intron | 30.0% | |
| TATAAGAAAGAAAGGGATTC+CGG | - | chr1.3:55795565-55795584 | MS.gene065806:intron | 30.0% | |
| TCTGATATCTAACATGTCTT+TGG | - | chr1.3:55793538-55793557 | MS.gene065806:intron | 30.0% | |
| TGTGGTTATTGTTTCATATG+GGG | - | chr1.3:55792769-55792788 | MS.gene065806:CDS | 30.0% | |
| TTAATTATCCATGGACACTA+TGG | + | chr1.3:55794553-55794572 | None:intergenic | 30.0% | |
| TTGAGCCTAATAACTATTCT+TGG | - | chr1.3:55792578-55792597 | MS.gene065806:CDS | 30.0% | |
| TTGCAATTGGTACAAATGAT+TGG | - | chr1.3:55795176-55795195 | MS.gene065806:intron | 30.0% | |
| ! | CCATCTTTTCTTGATTTAAC+TGG | + | chr1.3:55795415-55795434 | None:intergenic | 30.0% |
| ! | CTTTTAATCAAATGCGTGTT+TGG | - | chr1.3:55792716-55792735 | MS.gene065806:CDS | 30.0% |
| ! | GATCGAGAATGTTCAAATTT+TGG | - | chr1.3:55793958-55793977 | MS.gene065806:intron | 30.0% |
| ! | GTTGTTGTTATGGATATCTT+GGG | - | chr1.3:55792469-55792488 | MS.gene065806:CDS | 30.0% |
| ! | TGTTGTTGTTATGGATATCT+TGG | - | chr1.3:55792468-55792487 | MS.gene065806:CDS | 30.0% |
| !! | AATTCTACTATGCTAGCTTT+CGG | + | chr1.3:55795124-55795143 | None:intergenic | 30.0% |
| !! | CAAAATTTGTGTAAGTTGGT+TGG | - | chr1.3:55792920-55792939 | MS.gene065806:intron | 30.0% |
| !! | GAATTCCTTTGTTGTTGTTA+TGG | - | chr1.3:55792459-55792478 | MS.gene065806:CDS | 30.0% |
| !!! | GTAGGCTTAAAAAGCTTTTT+TGG | - | chr1.3:55793747-55793766 | MS.gene065806:intron | 30.0% |
| AAAGCAATTGAACTATGACC+TGG | - | chr1.3:55793401-55793420 | MS.gene065806:CDS | 35.0% | |
| AACTTACTACTGTGTGACTA+AGG | - | chr1.3:55794430-55794449 | MS.gene065806:intron | 35.0% | |
| AAGATAACAGCAATCCAAAG+TGG | + | chr1.3:55792517-55792536 | None:intergenic | 35.0% | |
| ATATCATAGGTCGTCGAATT+TGG | - | chr1.3:55794396-55794415 | MS.gene065806:intron | 35.0% | |
| ATCAAAATAGGGGTGAGAAT+AGG | + | chr1.3:55793877-55793896 | None:intergenic | 35.0% | |
| ATTAAAAACGAACCTGGTTG+CGG | + | chr1.3:55792680-55792699 | None:intergenic | 35.0% | |
| CAATTGACATGTCCATAGAA+GGG | + | chr1.3:55794468-55794487 | None:intergenic | 35.0% | |
| CCATGGATAATTAACCAACT+AGG | - | chr1.3:55794559-55794578 | MS.gene065806:intron | 35.0% | |
| CCTAGTTGGTTAATTATCCA+TGG | + | chr1.3:55794562-55794581 | None:intergenic | 35.0% | |
| CCTATTTAGCTAAACAGATC+AGG | + | chr1.3:55793783-55793802 | None:intergenic | 35.0% | |
| CCTGATCTGTTTAGCTAAAT+AGG | - | chr1.3:55793780-55793799 | MS.gene065806:intron | 35.0% | |
| GATCCGTAAAATTGTACAGT+AGG | - | chr1.3:55793926-55793945 | MS.gene065806:intron | 35.0% | |
| GGTTTACAACACAAAACACA+AGG | + | chr1.3:55794285-55794304 | None:intergenic | 35.0% | |
| TAAACTGTCAATTACCTGCA+CGG | + | chr1.3:55794917-55794936 | None:intergenic | 35.0% | |
| TATCATAGGTCGTCGAATTT+GGG | - | chr1.3:55794397-55794416 | MS.gene065806:intron | 35.0% | |
| TCAAACTGAACCGTACTAAA+CGG | - | chr1.3:55793289-55793308 | MS.gene065806:intron | 35.0% | |
| TCACACTTATACCTTGCAAT+TGG | - | chr1.3:55795163-55795182 | MS.gene065806:intron | 35.0% | |
| TCTCTATCACTGCAAAAGAA+GGG | + | chr1.3:55794374-55794393 | None:intergenic | 35.0% | |
| TGATGAAAAAGCTACCTAGT+TGG | + | chr1.3:55794576-55794595 | None:intergenic | 35.0% | |
| TTACTTCGTAGTCATAGCTA+AGG | + | chr1.3:55794306-55794325 | None:intergenic | 35.0% | |
| TTAGATGATACTTGCGTGTT+CGG | - | chr1.3:55793067-55793086 | MS.gene065806:intron | 35.0% | |
| TTATTAGCACATGCTGACAA+TGG | + | chr1.3:55795595-55795614 | None:intergenic | 35.0% | |
| TTCTCTATCACTGCAAAAGA+AGG | + | chr1.3:55794375-55794394 | None:intergenic | 35.0% | |
| ! | AACTGGCATCTTAGTGATTT+TGG | - | chr1.3:55795226-55795245 | MS.gene065806:intron | 35.0% |
| ! | AAGTTGGTTGGAGAAAAAGA+TGG | - | chr1.3:55792932-55792951 | MS.gene065806:intron | 35.0% |
| ! | AGTTGGTTAGGGATTTCTTT+TGG | - | chr1.3:55794142-55794161 | MS.gene065806:CDS | 35.0% |
| ! | ATACCTAAGCTTCTAGTTGT+TGG | - | chr1.3:55795733-55795752 | MS.gene065806:CDS | 35.0% |
| ! | CTTTGGATTGCTGTTATCTT+CGG | - | chr1.3:55792517-55792536 | MS.gene065806:CDS | 35.0% |
| ! | GTGCCTACTGTACAATTTTA+CGG | + | chr1.3:55793932-55793951 | None:intergenic | 35.0% |
| ! | GTTGGTTAGGGATTTCTTTT+GGG | - | chr1.3:55794143-55794162 | MS.gene065806:CDS | 35.0% |
| ! | TCTTCAAGTTTCGAATTCCT+TGG | - | chr1.3:55792611-55792630 | MS.gene065806:CDS | 35.0% |
| ! | TTCAACTATTCAAGAGTGTG+AGG | - | chr1.3:55794209-55794228 | MS.gene065806:intron | 35.0% |
| ! | TTTTCTACATGGTATGCCAA+AGG | - | chr1.3:55795309-55795328 | MS.gene065806:CDS | 35.0% |
| !! | AGCTCTGAATCATTAAACCA+AGG | + | chr1.3:55792631-55792650 | None:intergenic | 35.0% |
| !! | ATATGCTCTAAAGACGTGTT+AGG | + | chr1.3:55793485-55793504 | None:intergenic | 35.0% |
| !!! | GGCTTAAAAAGCTTTTTTGG+TGG | - | chr1.3:55793750-55793769 | MS.gene065806:intron | 35.0% |
| !!! | TCTTTTGGGATGATGAGTTT+CGG | - | chr1.3:55794157-55794176 | MS.gene065806:CDS | 35.0% |
| AAGAAATCCCTAACCAACTC+AGG | + | chr1.3:55794141-55794160 | None:intergenic | 40.0% | |
| AGAAACCTATGGCTTAGCTT+AGG | + | chr1.3:55793840-55793859 | None:intergenic | 40.0% | |
| AGATATTGCCATAGTGTCCA+TGG | - | chr1.3:55794542-55794561 | MS.gene065806:intron | 40.0% | |
| AGCCATAGGTTTCTGTCAAT+CGG | - | chr1.3:55793846-55793865 | MS.gene065806:intron | 40.0% | |
| ATGAAGATATGGGCATACCT+TGG | - | chr1.3:55795470-55795489 | MS.gene065806:intron | 40.0% | |
| ATGTCCATAGAAGGGAAACT+GGG | + | chr1.3:55794460-55794479 | None:intergenic | 40.0% | |
| ATTAGGCTCAATAGCCCATT+TGG | + | chr1.3:55792569-55792588 | None:intergenic | 40.0% | |
| CAAACATGACTTACCAAGCT+TGG | - | chr1.3:55792993-55793012 | MS.gene065806:intron | 40.0% | |
| CAAGCTTGGTAAGTCATGTT+TGG | + | chr1.3:55792995-55793014 | None:intergenic | 40.0% | |
| CAGGAGTAAGAAATACCTCT+TGG | + | chr1.3:55793027-55793046 | None:intergenic | 40.0% | |
| CCTACATTGGGTTATTTGAG+CGG | - | chr1.3:55793344-55793363 | MS.gene065806:intron | 40.0% | |
| CGTACTAAACGGTTCAAAAC+CGG | - | chr1.3:55793300-55793319 | MS.gene065806:intron | 40.0% | |
| CTTAACCTAAGCTAAGCCAT+AGG | - | chr1.3:55793832-55793851 | MS.gene065806:intron | 40.0% | |
| GAATGGGCAACTTAATCTCA+TGG | + | chr1.3:55794491-55794510 | None:intergenic | 40.0% | |
| GACGTGTTAGGTATCAGAAT+AGG | + | chr1.3:55793473-55793492 | None:intergenic | 40.0% | |
| GCAATTGACATGTCCATAGA+AGG | + | chr1.3:55794469-55794488 | None:intergenic | 40.0% | |
| GCTTAGCTTAGGTTAAGCTT+AGG | + | chr1.3:55793829-55793848 | None:intergenic | 40.0% | |
| GTCAGTCTAGTGATGAGAAT+TGG | - | chr1.3:55793182-55793201 | MS.gene065806:intron | 40.0% | |
| GTGAAAGTGAAAAGGGATTG+AGG | - | chr1.3:55792873-55792892 | MS.gene065806:CDS | 40.0% | |
| GTGTCTGTTCACAGTTAAAC+CGG | + | chr1.3:55793322-55793341 | None:intergenic | 40.0% | |
| TATTCCAAATACAACCGCCT+TGG | + | chr1.3:55795803-55795822 | None:intergenic | 40.0% | |
| TCCAGGATCAAACTTCTTGA+CGG | + | chr1.3:55795536-55795555 | None:intergenic | 40.0% | |
| TCTTCTGATGACAAACCGAT+CGG | - | chr1.3:55795703-55795722 | MS.gene065806:CDS | 40.0% | |
| TGAAGATATGGGCATACCTT+GGG | - | chr1.3:55795471-55795490 | MS.gene065806:intron | 40.0% | |
| TGGCGTATTTCACTTCTTCA+GGG | - | chr1.3:55794819-55794838 | MS.gene065806:intron | 40.0% | |
| TTACGTTCATAGCTCCACTT+TGG | - | chr1.3:55792500-55792519 | MS.gene065806:CDS | 40.0% | |
| TTAGGCTCAATAGCCCATTT+GGG | + | chr1.3:55792568-55792587 | None:intergenic | 40.0% | |
| TTCTTATACGTACGTAGTCC+AGG | + | chr1.3:55795553-55795572 | None:intergenic | 40.0% | |
| TTGGTTGGAGAAAAAGATGG+TGG | - | chr1.3:55792935-55792954 | MS.gene065806:intron | 40.0% | |
| ! | TCTGGTGGTGAAAGTGAAAA+GGG | - | chr1.3:55792866-55792885 | MS.gene065806:CDS | 40.0% |
| ! | TTCCGAATTTTCCAAACCGT+CGG | + | chr1.3:55795828-55795847 | None:intergenic | 40.0% |
| ! | TTCTGGTGGTGAAAGTGAAA+AGG | - | chr1.3:55792865-55792884 | MS.gene065806:CDS | 40.0% |
| ! | TTGTATTTGGAATAGCCCGA+CGG | - | chr1.3:55795809-55795828 | MS.gene065806:CDS | 40.0% |
| !! | GCTTTTTAAGCCTACTAGAC+CGG | + | chr1.3:55793742-55793761 | None:intergenic | 40.0% |
| !! | GTTATCTTCGGTGTTGTTGT+TGG | - | chr1.3:55792529-55792548 | MS.gene065806:CDS | 40.0% |
| !!! | CGGTTTTGAACCGTTTAGTA+CGG | + | chr1.3:55793302-55793321 | None:intergenic | 40.0% |
| AAGGCAGAGCAAACCTAAAC+GGG | - | chr1.3:55794863-55794882 | MS.gene065806:intron | 45.0% | |
| ACACGCATCTGTTGCATATG+TGG | - | chr1.3:55795388-55795407 | MS.gene065806:CDS | 45.0% | |
| ACACTTCACATGAAGTCAGC+TGG | + | chr1.3:55795438-55795457 | None:intergenic | 45.0% | |
| ACCACAGTATCGCAGTAGAA+CGG | - | chr1.3:55794098-55794117 | MS.gene065806:CDS | 45.0% | |
| ACCAGCTTGGATTCAGATGA+TGG | - | chr1.3:55792958-55792977 | MS.gene065806:intron | 45.0% | |
| AGCTAAACAGATCAGGCTAC+TGG | + | chr1.3:55793776-55793795 | None:intergenic | 45.0% | |
| ATCCTAAGTTGTTCTCGGCT+TGG | + | chr1.3:55793208-55793227 | None:intergenic | 45.0% | |
| CAACACAACACTGACACATG+TGG | - | chr1.3:55792751-55792770 | MS.gene065806:CDS | 45.0% | |
| CAAGGCAGAGCAAACCTAAA+CGG | - | chr1.3:55794862-55794881 | MS.gene065806:intron | 45.0% | |
| CACATGTGTCAGTGTTGTGT+TGG | + | chr1.3:55792753-55792772 | None:intergenic | 45.0% | |
| CATGTCCATAGAAGGGAAAC+TGG | + | chr1.3:55794461-55794480 | None:intergenic | 45.0% | |
| CCGCTCAAATAACCCAATGT+AGG | + | chr1.3:55793347-55793366 | None:intergenic | 45.0% | |
| CCTGTTGGAGACTGAAAATC+AGG | - | chr1.3:55795678-55795697 | MS.gene065806:CDS | 45.0% | |
| CTTCTGATGACAAACCGATC+GGG | - | chr1.3:55795704-55795723 | MS.gene065806:CDS | 45.0% | |
| GAACAGACACTGCCTACATT+GGG | - | chr1.3:55793332-55793351 | MS.gene065806:intron | 45.0% | |
| GACCGATTGACAGAAACCTA+TGG | + | chr1.3:55793851-55793870 | None:intergenic | 45.0% | |
| GCTTCAAAACCAACCTGGTT+TGG | - | chr1.3:55792648-55792667 | MS.gene065806:CDS | 45.0% | |
| GGTTTGGAAAATTCGGAAGG+AGG | - | chr1.3:55795830-55795849 | MS.gene065806:CDS | 45.0% | |
| GTACTGCAAAGTATGCTGCA+TGG | - | chr1.3:55794640-55794659 | MS.gene065806:intron | 45.0% | |
| GTGGAGCTATGAACGTAACA+AGG | + | chr1.3:55792498-55792517 | None:intergenic | 45.0% | |
| GTGGCGTATTTCACTTCTTC+AGG | - | chr1.3:55794818-55794837 | MS.gene065806:intron | 45.0% | |
| TACCTTGTTCCTCCATACCA+AGG | - | chr1.3:55794844-55794863 | MS.gene065806:intron | 45.0% | |
| TATGCCCAGTTTCCCTTCTA+TGG | - | chr1.3:55794453-55794472 | MS.gene065806:intron | 45.0% | |
| TCAGAGCTTCAAAACCAACC+TGG | - | chr1.3:55792643-55792662 | MS.gene065806:CDS | 45.0% | |
| TCCATCATCTGAATCCAAGC+TGG | + | chr1.3:55792962-55792981 | None:intergenic | 45.0% | |
| TGAACAGACACTGCCTACAT+TGG | - | chr1.3:55793331-55793350 | MS.gene065806:intron | 45.0% | |
| TGAGGTCACTGGAACAATGA+TGG | - | chr1.3:55794227-55794246 | MS.gene065806:intron | 45.0% | |
| TGCGTGTTCGGTTATCTAGT+TGG | - | chr1.3:55793079-55793098 | MS.gene065806:intron | 45.0% | |
| TTAGGTATGCTTCTCCCGAT+CGG | + | chr1.3:55795721-55795740 | None:intergenic | 45.0% | |
| TTATTTGAGCGGTTCAACCG+TGG | - | chr1.3:55793355-55793374 | MS.gene065806:intron | 45.0% | |
| TTCAGTCTCCAACAGGTTAC+CGG | + | chr1.3:55795674-55795693 | None:intergenic | 45.0% | |
| TTGGGCTTGGAAACCCAAAT+GGG | - | chr1.3:55792552-55792571 | MS.gene065806:CDS | 45.0% | |
| TTGTTTCATATGGGGCAGTG+TGG | - | chr1.3:55792777-55792796 | MS.gene065806:CDS | 45.0% | |
| ! | ATTCAAGAGTGTGAGGTCAC+TGG | - | chr1.3:55794216-55794235 | MS.gene065806:intron | 45.0% |
| ! | CCTAAGCTTCTAGTTGTTGG+CGG | - | chr1.3:55795736-55795755 | MS.gene065806:CDS | 45.0% |
| ! | CCTGATTTTCAGTCTCCAAC+AGG | + | chr1.3:55795681-55795700 | None:intergenic | 45.0% |
| ! | GACGGTTTGGAAAATTCGGA+AGG | - | chr1.3:55795827-55795846 | MS.gene065806:CDS | 45.0% |
| ! | GGGATTGAGGAGTATAGTGA+CGG | - | chr1.3:55792886-55792905 | MS.gene065806:intron | 45.0% |
| ! | TCAAGCTTTTGTATCCGTGC+AGG | - | chr1.3:55794900-55794919 | MS.gene065806:intron | 45.0% |
| ! | TCCGAATTTTCCAAACCGTC+GGG | + | chr1.3:55795827-55795846 | None:intergenic | 45.0% |
| ! | TGCTGATTACGTGAGATCTG+TGG | - | chr1.3:55795639-55795658 | MS.gene065806:CDS | 45.0% |
| ! | TGGAACAATGATGGTGCAGT+GGG | - | chr1.3:55794236-55794255 | MS.gene065806:intron | 45.0% |
| ! | TTTTAGTAGGCCGGTCTAGT+AGG | - | chr1.3:55793729-55793748 | MS.gene065806:intron | 45.0% |
| !! | AAAAAGATGGTGGACCAGCT+TGG | - | chr1.3:55792945-55792964 | MS.gene065806:intron | 45.0% |
| !! | CTTCGGTGTTGTTGTTGGTT+GGG | - | chr1.3:55792534-55792553 | MS.gene065806:CDS | 45.0% |
| !! | TCTTCGGTGTTGTTGTTGGT+TGG | - | chr1.3:55792533-55792552 | MS.gene065806:CDS | 45.0% |
| !!! | ATTAAAAAACAATTTTATTA+TGG | - | chr1.3:55795096-55795115 | MS.gene065806:intron | 5.0% |
| ACATGCTGACAATGGAACGC+CGG | + | chr1.3:55795587-55795606 | None:intergenic | 50.0% | |
| ACCGTTCTACTGCGATACTG+TGG | + | chr1.3:55794102-55794121 | None:intergenic | 50.0% | |
| AGATCTGTGGAAGACTCGAC+CGG | - | chr1.3:55795652-55795671 | MS.gene065806:CDS | 50.0% | |
| ATCCAAACCCGAAACCAAGC+CGG | + | chr1.3:55793435-55793454 | None:intergenic | 50.0% | |
| ATGATGAGTTTCGGTCGAGG+TGG | - | chr1.3:55794166-55794185 | MS.gene065806:CDS | 50.0% | |
| CATGTCACGTGCAGTTCTTC+TGG | - | chr1.3:55792848-55792867 | MS.gene065806:CDS | 50.0% | |
| CCAAGCTTAGCGATTTCCCA+AGG | + | chr1.3:55795490-55795509 | None:intergenic | 50.0% | |
| CCGCCAACAACTAGAAGCTT+AGG | + | chr1.3:55795739-55795758 | None:intergenic | 50.0% | |
| CCTTGGGAAATCGCTAAGCT+TGG | - | chr1.3:55795487-55795506 | MS.gene065806:intron | 50.0% | |
| CTATGACCTGGAGTTCTCAC+CGG | - | chr1.3:55793413-55793432 | MS.gene065806:CDS | 50.0% | |
| CTCGAACCTGGACAAAACCA+CGG | + | chr1.3:55793375-55793394 | None:intergenic | 50.0% | |
| GACTTACCAAGCTTGGCGTA+GGG | - | chr1.3:55793000-55793019 | MS.gene065806:intron | 50.0% | |
| GCCGTCAAGAAGTTTGATCC+TGG | - | chr1.3:55795532-55795551 | MS.gene065806:intron | 50.0% | |
| GCTAAGCTTGGAGTTCGTCA+GGG | - | chr1.3:55795499-55795518 | MS.gene065806:intron | 50.0% | |
| GGTCACTAGCCCTTGATCAA+GGG | + | chr1.3:55795782-55795801 | None:intergenic | 50.0% | |
| GTGACCAAGGCGGTTGTATT+TGG | - | chr1.3:55795796-55795815 | MS.gene065806:CDS | 50.0% | |
| GTTCTACTGCGATACTGTGG+TGG | + | chr1.3:55794099-55794118 | None:intergenic | 50.0% | |
| GTTGGGCTTGGAAACCCAAA+TGG | - | chr1.3:55792551-55792570 | MS.gene065806:CDS | 50.0% | |
| TGAAGATGCGAGTCCTGAGT+TGG | - | chr1.3:55794125-55794144 | MS.gene065806:CDS | 50.0% | |
| TGACTTACCAAGCTTGGCGT+AGG | - | chr1.3:55792999-55793018 | MS.gene065806:intron | 50.0% | |
| TGATGAGTTTCGGTCGAGGT+GGG | - | chr1.3:55794167-55794186 | MS.gene065806:CDS | 50.0% | |
| TGCCTTGGTATGGAGGAACA+AGG | + | chr1.3:55794849-55794868 | None:intergenic | 50.0% | |
| TGGAGTTCGTCAGGGTATGT+GGG | - | chr1.3:55795507-55795526 | MS.gene065806:intron | 50.0% | |
| TGGTCACTAGCCCTTGATCA+AGG | + | chr1.3:55795783-55795802 | None:intergenic | 50.0% | |
| TTGCCTGCACCCTTGATCAA+GGG | - | chr1.3:55795770-55795789 | MS.gene065806:CDS | 50.0% | |
| TTGGAGTTCGTCAGGGTATG+TGG | - | chr1.3:55795506-55795525 | MS.gene065806:intron | 50.0% | |
| TTTGCTCTGCCTTGGTATGG+AGG | + | chr1.3:55794856-55794875 | None:intergenic | 50.0% | |
| ! | AGGTTTGCTCTGCCTTGGTA+TGG | + | chr1.3:55794859-55794878 | None:intergenic | 50.0% |
| ! | CGGAGTATTCCAAACCAGGT+TGG | + | chr1.3:55792660-55792679 | None:intergenic | 50.0% |
| ! | CGTTTAGGTTTGCTCTGCCT+TGG | + | chr1.3:55794864-55794883 | None:intergenic | 50.0% |
| ! | CTGGAACAATGATGGTGCAG+TGG | - | chr1.3:55794235-55794254 | MS.gene065806:intron | 50.0% |
| ! | GCCCGACGGTTTGGAAAATT+CGG | - | chr1.3:55795823-55795842 | MS.gene065806:CDS | 50.0% |
| ! | GTGTTGTTGTTGGTTGGGCT+TGG | - | chr1.3:55792539-55792558 | MS.gene065806:CDS | 50.0% |
| ! | GTTGCGGAGTATTCCAAACC+AGG | + | chr1.3:55792664-55792683 | None:intergenic | 50.0% |
| ! | GTTTGGAATACTCCGCAACC+AGG | - | chr1.3:55792665-55792684 | MS.gene065806:CDS | 50.0% |
| ! | TAGGGTGCTCTCAACGAACT+TGG | + | chr1.3:55794001-55794020 | None:intergenic | 50.0% |
| ! | TGATCAAGGGCTAGTGACCA+AGG | - | chr1.3:55795783-55795802 | MS.gene065806:CDS | 50.0% |
| ! | TGCTTTAAACCGCTCGAACC+TGG | + | chr1.3:55793387-55793406 | None:intergenic | 50.0% |
| ! | TTGATCAAGGGTGCAGGCAA+GGG | + | chr1.3:55795770-55795789 | None:intergenic | 50.0% |
| ! | TTTGGAATAGCCCGACGGTT+TGG | - | chr1.3:55795814-55795833 | MS.gene065806:CDS | 50.0% |
| !! | AGTTCTCACCGGCTTGGTTT+CGG | - | chr1.3:55793424-55793443 | MS.gene065806:CDS | 50.0% |
| !! | ATGCGAGTCCTGAGTTGGTT+AGG | - | chr1.3:55794130-55794149 | MS.gene065806:CDS | 50.0% |
| !! | TGCGAGTCCTGAGTTGGTTA+GGG | - | chr1.3:55794131-55794150 | MS.gene065806:CDS | 50.0% |
| !!! | GTTCAACCGTGGTTTTGTCC+AGG | - | chr1.3:55793366-55793385 | MS.gene065806:intron | 50.0% |
| !!! | TGGTTTTGTCCAGGTTCGAG+CGG | - | chr1.3:55793375-55793394 | MS.gene065806:intron | 50.0% |
| AGACTCGACCGGTAACCTGT+TGG | - | chr1.3:55795663-55795682 | MS.gene065806:CDS | 55.0% | |
| CGCTAAGCTTGGAGTTCGTC+AGG | - | chr1.3:55795498-55795517 | MS.gene065806:intron | 55.0% | |
| CTTGCCTGCACCCTTGATCA+AGG | - | chr1.3:55795769-55795788 | MS.gene065806:CDS | 55.0% | |
| GGAGTTCGTCAGGGTATGTG+GGG | - | chr1.3:55795508-55795527 | MS.gene065806:intron | 55.0% | |
| GGCCAAGCCGAGAACAACTT+AGG | - | chr1.3:55793203-55793222 | MS.gene065806:intron | 55.0% | |
| GGGATGATGAGTTTCGGTCG+AGG | - | chr1.3:55794163-55794182 | MS.gene065806:CDS | 55.0% | |
| GTCACGTGCAGTTCTTCTGG+TGG | - | chr1.3:55792851-55792870 | MS.gene065806:CDS | 55.0% | |
| ! | CTTGATCAAGGGTGCAGGCA+AGG | + | chr1.3:55795771-55795790 | None:intergenic | 55.0% |
| ! | TAGCCCTTGATCAAGGGTGC+AGG | + | chr1.3:55795776-55795795 | None:intergenic | 55.0% |
| ! | TCAAGGGCTAGTGACCAAGG+CGG | - | chr1.3:55795786-55795805 | MS.gene065806:CDS | 55.0% |
| !! | GTTCTCACCGGCTTGGTTTC+GGG | - | chr1.3:55793425-55793444 | MS.gene065806:CDS | 55.0% |
| ACCAAGCCGGTGAGAACTCC+AGG | + | chr1.3:55793422-55793441 | None:intergenic | 60.0% | |
| AGCTTGGCGTAGGGACCAAG+AGG | - | chr1.3:55793009-55793028 | MS.gene065806:intron | 60.0% | |
| CTTGGTCCCTACGCCAAGCT+TGG | + | chr1.3:55793009-55793028 | None:intergenic | 60.0% | |
| ! | AAGGGTGCAGGCAAGGGCAA+TGG | + | chr1.3:55795764-55795783 | None:intergenic | 60.0% |
| ! | ACCTGGAGTTCTCACCGGCT+TGG | - | chr1.3:55793418-55793437 | MS.gene065806:CDS | 60.0% |
| !! | CACCGGCTTGGTTTCGGGTT+TGG | - | chr1.3:55793430-55793449 | MS.gene065806:CDS | 60.0% |
| GATGGTGCAGTGGGTGCGCA+AGG | - | chr1.3:55794245-55794264 | MS.gene065806:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 55792451 | 55795858 | 55792451 | ID=MS.gene065806 |
| chr1.3 | mRNA | 55792451 | 55795858 | 55792451 | ID=MS.gene065806.t1;Parent=MS.gene065806 |
| chr1.3 | exon | 55795623 | 55795858 | 55795623 | ID=MS.gene065806.t1.exon1;Parent=MS.gene065806.t1 |
| chr1.3 | CDS | 55795623 | 55795858 | 55795623 | ID=cds.MS.gene065806.t1;Parent=MS.gene065806.t1 |
| chr1.3 | exon | 55795279 | 55795447 | 55795279 | ID=MS.gene065806.t1.exon2;Parent=MS.gene065806.t1 |
| chr1.3 | CDS | 55795279 | 55795447 | 55795279 | ID=cds.MS.gene065806.t1;Parent=MS.gene065806.t1 |
| chr1.3 | exon | 55794043 | 55794219 | 55794043 | ID=MS.gene065806.t1.exon3;Parent=MS.gene065806.t1 |
| chr1.3 | CDS | 55794043 | 55794219 | 55794043 | ID=cds.MS.gene065806.t1;Parent=MS.gene065806.t1 |
| chr1.3 | exon | 55793858 | 55793941 | 55793858 | ID=MS.gene065806.t1.exon4;Parent=MS.gene065806.t1 |
| chr1.3 | CDS | 55793858 | 55793941 | 55793858 | ID=cds.MS.gene065806.t1;Parent=MS.gene065806.t1 |
| chr1.3 | exon | 55793388 | 55793469 | 55793388 | ID=MS.gene065806.t1.exon5;Parent=MS.gene065806.t1 |
| chr1.3 | CDS | 55793388 | 55793469 | 55793388 | ID=cds.MS.gene065806.t1;Parent=MS.gene065806.t1 |
| chr1.3 | exon | 55792451 | 55792893 | 55792451 | ID=MS.gene065806.t1.exon6;Parent=MS.gene065806.t1 |
| chr1.3 | CDS | 55792451 | 55792893 | 55792451 | ID=cds.MS.gene065806.t1;Parent=MS.gene065806.t1 |
| Gene Sequence |
| Protein sequence |
