Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065925.t1 | KEH26813.1 | 92.4 | 250 | 19 | 0 | 1 | 250 | 1 | 250 | 5.90E-115 | 423.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065925.t1 | B6K8A0 | 37.2 | 172 | 106 | 2 | 75 | 246 | 115 | 284 | 5.4e-24 | 112.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065925.t1 | A0A072UCN1 | 92.4 | 250 | 19 | 0 | 1 | 250 | 1 | 250 | 4.3e-115 | 423.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene64804 | MS.gene065925 | PPI |
MS.gene065925 | MS.gene035486 | PPI |
MS.gene065925 | MS.gene67483 | PPI |
MS.gene065925 | MS.gene93333 | PPI |
MS.gene065925 | MS.gene040757 | PPI |
MS.gene59503 | MS.gene065925 | PPI |
MS.gene065925 | MS.gene073734 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065925.t1 | MTR_6g075250 | 94.400 | 250 | 14 | 0 | 1 | 250 | 1 | 250 | 7.38e-157 | 436 |
MS.gene065925.t1 | MTR_5g058150 | 70.518 | 251 | 71 | 3 | 1 | 249 | 1 | 250 | 8.52e-113 | 324 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065925.t1 | AT1G12650 | 50.403 | 248 | 117 | 4 | 1 | 245 | 1 | 245 | 4.03e-59 | 187 |
MS.gene065925.t1 | AT1G12650 | 50.403 | 248 | 117 | 4 | 1 | 245 | 1 | 245 | 4.03e-59 | 187 |
MS.gene065925.t1 | AT1G12650 | 50.403 | 248 | 117 | 4 | 1 | 245 | 1 | 245 | 4.03e-59 | 187 |
MS.gene065925.t1 | AT1G12650 | 50.403 | 248 | 117 | 4 | 1 | 245 | 1 | 245 | 4.03e-59 | 187 |
Find 48 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAATATTGAGGCAGAGATTT+TGG | 0.205412 | 6.2:+75553871 | MS.gene065925:CDS |
TTACATTTCTTGAGATAAAA+AGG | 0.241645 | 6.2:-75553941 | None:intergenic |
TCAATATTTCTTGCTGAATC+AGG | 0.263298 | 6.2:-75553857 | None:intergenic |
AAGCCTTTGCCTTCTGATTT+CGG | 0.292375 | 6.2:-75554070 | None:intergenic |
CCACAATGGGATTCAAATCT+TGG | 0.346873 | 6.2:-75552857 | None:intergenic |
AGAATCAAGATCACCTTCTT+AGG | 0.347988 | 6.2:-75552374 | None:intergenic |
TAGCATATGGCATAAATCTA+TGG | 0.351847 | 6.2:-75554279 | None:intergenic |
TCGATTTCACTTCTGCGCTC+TGG | 0.374526 | 6.2:-75553711 | None:intergenic |
GTGATTTACTTGACTCTAAT+CGG | 0.378845 | 6.2:+75552879 | MS.gene065925:CDS |
CATTATCACTCTCCTTGTAC+TGG | 0.438119 | 6.2:-75551837 | None:intergenic |
GGACACAACAGACTCTTAAG+AGG | 0.450885 | 6.2:+75553667 | MS.gene065925:intron |
AAGCTCGGAAGTGGAATTCC+AGG | 0.460429 | 6.2:+75551802 | MS.gene065925:CDS |
TTGATTCATATATTGAGAAA+AGG | 0.461564 | 6.2:+75554233 | MS.gene065925:CDS |
AATACTACCTTTCTTTCAGC+AGG | 0.464613 | 6.2:-75553577 | None:intergenic |
TTCTTGCTACTAGCCTCCAT+TGG | 0.466563 | 6.2:-75552317 | None:intergenic |
TTGCAGAACGCTCGATCTAA+CGG | 0.468627 | 6.2:+75552051 | MS.gene065925:CDS |
TACTGGATTTCACTGGAACC+TGG | 0.471299 | 6.2:-75551820 | None:intergenic |
GTCAAGTAAATCACCACAAT+GGG | 0.481486 | 6.2:-75552870 | None:intergenic |
GAGAAGAAAAGAAGTTGAAA+AGG | 0.487279 | 6.2:+75552100 | MS.gene065925:CDS |
CTCCTTGTACTGGATTTCAC+TGG | 0.490528 | 6.2:-75551827 | None:intergenic |
GGAAGAGATATTGAAGGAGC+TGG | 0.494183 | 6.2:+75552008 | MS.gene065925:CDS |
TGATCTTCCTGCTGAAAGAA+AGG | 0.494790 | 6.2:+75553570 | MS.gene065925:CDS |
TGAAAAGGCTTAATAAGAAT+AGG | 0.495942 | 6.2:+75552115 | MS.gene065925:CDS |
TGCAGAACGCTCGATCTAAC+GGG | 0.496426 | 6.2:+75552052 | MS.gene065925:CDS |
AAATCGAAGAACTCGTATCA+TGG | 0.500950 | 6.2:+75553727 | MS.gene065925:CDS |
GGAGGAGGAAGAGATATTGA+AGG | 0.502071 | 6.2:+75552002 | MS.gene065925:intron |
CCTTACTATTCGTTGTCGAC+AGG | 0.505163 | 6.2:-75554304 | None:intergenic |
GCTGGCTGATGTAACGTTTG+AGG | 0.510830 | 6.2:+75552026 | MS.gene065925:CDS |
ACTCACATCATCTGATATGC+TGG | 0.510888 | 6.2:-75551878 | None:intergenic |
ACAGAGAGAAGCTGCAAAGG+AGG | 0.511757 | 6.2:+75553910 | MS.gene065925:CDS |
TTGTCGACAGGTCTAGCATA+TGG | 0.514935 | 6.2:-75554292 | None:intergenic |
GAGACAGAGAGAAGCTGCAA+AGG | 0.520096 | 6.2:+75553907 | MS.gene065925:CDS |
AAAATGAAGAAGCTCGGAAG+TGG | 0.520702 | 6.2:+75551793 | None:intergenic |
TTTCTCAAAATGAAGAAGCT+CGG | 0.540948 | 6.2:+75551787 | None:intergenic |
TGTCATCCATGCTCCTAAGA+AGG | 0.547786 | 6.2:+75552361 | MS.gene065925:CDS |
CTAATGTTTGAATAGGCCAA+TGG | 0.565708 | 6.2:+75552301 | MS.gene065925:intron |
AGATCACCTTCTTAGGAGCA+TGG | 0.568351 | 6.2:-75552367 | None:intergenic |
CAGAGAGAAGCTGCAAAGGA+GGG | 0.573288 | 6.2:+75553911 | MS.gene065925:CDS |
TGTTTGCAGCCGAAATCAGA+AGG | 0.574206 | 6.2:+75554061 | MS.gene065925:intron |
ATTCATATATTGAGAAAAGG+AGG | 0.585349 | 6.2:+75554236 | MS.gene065925:CDS |
CAGCCGAAATCAGAAGGCAA+AGG | 0.587726 | 6.2:+75554067 | MS.gene065925:intron |
TTCCAGTGAAATCCAGTACA+AGG | 0.601473 | 6.2:+75551825 | MS.gene065925:CDS |
GAGGAAGAGAAATGCTGCGA+AGG | 0.601621 | 6.2:+75554255 | MS.gene065925:CDS |
TGATTCAGCAAGAAATATTG+AGG | 0.609034 | 6.2:+75553859 | MS.gene065925:CDS |
AGTCAAGTAAATCACCACAA+TGG | 0.611765 | 6.2:-75552871 | None:intergenic |
GACACAACAGACTCTTAAGA+GGG | 0.634732 | 6.2:+75553668 | MS.gene065925:intron |
ATGTTTGAATAGGCCAATGG+AGG | 0.654355 | 6.2:+75552304 | MS.gene065925:intron |
CCAAGATTTGAATCCCATTG+TGG | 0.675566 | 6.2:+75552857 | MS.gene065925:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATATGATTTAAAATAATTG+AGG | - | chr6.2:75553251-75553270 | None:intergenic | 10.0% |
!! | AAAAGAATAATATATTGAGT+CGG | - | chr6.2:75553064-75553083 | None:intergenic | 15.0% |
!! | ATAATTTCTAATGTTTGAAT+AGG | + | chr6.2:75552294-75552313 | MS.gene065925:intron | 15.0% |
!! | TTTCCCTATAAAATAATTTA+CGG | + | chr6.2:75552628-75552647 | MS.gene065925:intron | 15.0% |
!!! | TATTTTGATTAGAAACTATT+CGG | - | chr6.2:75552550-75552569 | None:intergenic | 15.0% |
!!! | TCGAAATATTCAAATTTTAA+GGG | + | chr6.2:75552710-75552729 | MS.gene065925:intron | 15.0% |
!!! | TTCGAAATATTCAAATTTTA+AGG | + | chr6.2:75552709-75552728 | MS.gene065925:intron | 15.0% |
!! | AAAGAATAATATATTGAGTC+GGG | - | chr6.2:75553063-75553082 | None:intergenic | 20.0% |
!! | AAATAAACTATGCAAGTTAA+TGG | - | chr6.2:75552585-75552604 | None:intergenic | 20.0% |
!! | ACTTATTAAGAATGACTTAA+AGG | + | chr6.2:75553304-75553323 | MS.gene065925:intron | 20.0% |
!! | TAGTTATCACATATATATGA+AGG | + | chr6.2:75553276-75553295 | MS.gene065925:intron | 20.0% |
!! | TTACATTTCTTGAGATAAAA+AGG | - | chr6.2:75553944-75553963 | None:intergenic | 20.0% |
!! | TTCATATATATGTGATAACT+AGG | - | chr6.2:75553277-75553296 | None:intergenic | 20.0% |
!! | TTCCCTATAAAATAATTTAC+GGG | + | chr6.2:75552629-75552648 | MS.gene065925:intron | 20.0% |
!! | TTCTAATCAAAATAGTTTCA+TGG | + | chr6.2:75552556-75552575 | MS.gene065925:intron | 20.0% |
!! | TTGATTCATATATTGAGAAA+AGG | + | chr6.2:75554233-75554252 | MS.gene065925:CDS | 20.0% |
!!! | AACTTGCATAGTTTATTTTT+GGG | + | chr6.2:75552587-75552606 | MS.gene065925:intron | 20.0% |
!!! | ATATTATTCTTTTCTGGTTT+TGG | + | chr6.2:75553071-75553090 | MS.gene065925:intron | 20.0% |
!!! | ATCTTTCTGTTTTATATATC+TGG | + | chr6.2:75552781-75552800 | MS.gene065925:intron | 20.0% |
!!! | CTCAATATATTATTCTTTTC+TGG | + | chr6.2:75553065-75553084 | MS.gene065925:intron | 20.0% |
!!! | TAACTTGCATAGTTTATTTT+TGG | + | chr6.2:75552586-75552605 | MS.gene065925:intron | 20.0% |
!!! | TATTTTAATTGCAATTGACA+TGG | + | chr6.2:75552974-75552993 | MS.gene065925:intron | 20.0% |
!!! | TTATTGATTTTGATGATTGT+AGG | + | chr6.2:75551981-75552000 | MS.gene065925:intron | 20.0% |
! | AAATGAACACAACAAGAAAA+AGG | - | chr6.2:75552937-75552956 | None:intergenic | 25.0% |
! | AGGTGAATAGATAGAATTAA+TGG | - | chr6.2:75554194-75554213 | None:intergenic | 25.0% |
! | ATTCATATATTGAGAAAAGG+AGG | + | chr6.2:75554236-75554255 | MS.gene065925:CDS | 25.0% |
! | GCACTAATAATATAAGTACT+TGG | + | chr6.2:75553506-75553525 | MS.gene065925:intron | 25.0% |
! | TAAAATAATTGAGGAAACGT+TGG | - | chr6.2:75553242-75553261 | None:intergenic | 25.0% |
! | TAATCAAAATAGTTTCATGG+AGG | + | chr6.2:75552559-75552578 | MS.gene065925:intron | 25.0% |
! | TGAAAAATATAAGCATCTCA+AGG | + | chr6.2:75554095-75554114 | MS.gene065925:CDS | 25.0% |
! | TGAAAAGGCTTAATAAGAAT+AGG | + | chr6.2:75552115-75552134 | MS.gene065925:CDS | 25.0% |
!!! | AATTGATTTCATGTTTTGGT+TGG | + | chr6.2:75552402-75552421 | MS.gene065925:intron | 25.0% |
!!! | AGCCCGTAAATTATTTTATA+GGG | - | chr6.2:75552634-75552653 | None:intergenic | 25.0% |
!!! | GACAAATTGATTTCATGTTT+TGG | + | chr6.2:75552398-75552417 | MS.gene065925:intron | 25.0% |
ACATATTGAAAGTGAGAGTA+AGG | - | chr6.2:75553994-75554013 | None:intergenic | 30.0% | |
ACTAATAAATGTCACACTTC+AGG | - | chr6.2:75553792-75553811 | None:intergenic | 30.0% | |
ATATAAGTACTTGGACTTAC+AGG | + | chr6.2:75553515-75553534 | MS.gene065925:intron | 30.0% | |
CAATCAATGGAATACATGTT+TGG | - | chr6.2:75552212-75552231 | None:intergenic | 30.0% | |
GAGAAGAAAAGAAGTTGAAA+AGG | + | chr6.2:75552100-75552119 | MS.gene065925:CDS | 30.0% | |
GTGATTTACTTGACTCTAAT+CGG | + | chr6.2:75552879-75552898 | MS.gene065925:CDS | 30.0% | |
GTTACAAACTTACTATGACA+TGG | - | chr6.2:75551952-75551971 | None:intergenic | 30.0% | |
TAAAATAATTTACGGGCTCA+TGG | + | chr6.2:75552636-75552655 | MS.gene065925:intron | 30.0% | |
TAGCATATGGCATAAATCTA+TGG | - | chr6.2:75554282-75554301 | None:intergenic | 30.0% | |
TCAATATTTCTTGCTGAATC+AGG | - | chr6.2:75553860-75553879 | None:intergenic | 30.0% | |
TGATTCAGCAAGAAATATTG+AGG | + | chr6.2:75553859-75553878 | MS.gene065925:CDS | 30.0% | |
TTGGAATCTGTCTGATAATA+TGG | + | chr6.2:75553090-75553109 | MS.gene065925:intron | 30.0% | |
TTTCAATATGTTAGCTGCAA+AGG | + | chr6.2:75554003-75554022 | MS.gene065925:intron | 30.0% | |
! | AAATATTGAGGCAGAGATTT+TGG | + | chr6.2:75553871-75553890 | MS.gene065925:CDS | 30.0% |
! | GTTGTTAACTCTTCTGATTT+TGG | + | chr6.2:75553194-75553213 | MS.gene065925:intron | 30.0% |
! | TTCTATCTATTCACCTTTTC+AGG | + | chr6.2:75554198-75554217 | MS.gene065925:intron | 30.0% |
!! | AGTAGGTTTTGTCAAAATCA+TGG | - | chr6.2:75552458-75552477 | None:intergenic | 30.0% |
!! | GACAATTACTTTTAGTGCAT+AGG | + | chr6.2:75553424-75553443 | MS.gene065925:intron | 30.0% |
!! | GAGCCCGTAAATTATTTTAT+AGG | - | chr6.2:75552635-75552654 | None:intergenic | 30.0% |
!! | TTGATTTTGATGATTGTAGG+AGG | + | chr6.2:75551984-75552003 | MS.gene065925:intron | 30.0% |
AAATCGAAGAACTCGTATCA+TGG | + | chr6.2:75553727-75553746 | MS.gene065925:CDS | 35.0% | |
AAGGGTTGTTCTATTTGATG+TGG | + | chr6.2:75552728-75552747 | MS.gene065925:intron | 35.0% | |
AATACTACCTTTCTTTCAGC+AGG | - | chr6.2:75553580-75553599 | None:intergenic | 35.0% | |
AATATGTTAGCTGCAAAGGA+GGG | + | chr6.2:75554007-75554026 | MS.gene065925:intron | 35.0% | |
ACAATGAGAACAAGGTGAAA+GGG | - | chr6.2:75554147-75554166 | None:intergenic | 35.0% | |
AGAATCAAGATCACCTTCTT+AGG | - | chr6.2:75552377-75552396 | None:intergenic | 35.0% | |
AGCAATAGTTAGTGCATGTT+TGG | + | chr6.2:75552155-75552174 | MS.gene065925:intron | 35.0% | |
AGTCAAGTAAATCACCACAA+TGG | - | chr6.2:75552874-75552893 | None:intergenic | 35.0% | |
CCACTTTGTCAAACAATCAA+TGG | - | chr6.2:75552225-75552244 | None:intergenic | 35.0% | |
CGGTGAGTTTGATAAAATCA+CGG | - | chr6.2:75552511-75552530 | None:intergenic | 35.0% | |
CTAATGTTTGAATAGGCCAA+TGG | + | chr6.2:75552301-75552320 | MS.gene065925:intron | 35.0% | |
GACAGAATACAATGAGAACA+AGG | - | chr6.2:75554155-75554174 | None:intergenic | 35.0% | |
GTAAGGAAGATAAAAAGACG+AGG | - | chr6.2:75553977-75553996 | None:intergenic | 35.0% | |
GTCAAGTAAATCACCACAAT+GGG | - | chr6.2:75552873-75552892 | None:intergenic | 35.0% | |
TAAAAAGACGAGGAAGAGAA+AGG | - | chr6.2:75553967-75553986 | None:intergenic | 35.0% | |
TACAATGAGAACAAGGTGAA+AGG | - | chr6.2:75554148-75554167 | None:intergenic | 35.0% | |
TAGAGTAAACAACGAGCAAT+TGG | - | chr6.2:75552674-75552693 | None:intergenic | 35.0% | |
TGACAAAACCTACTCTTTGT+TGG | + | chr6.2:75552464-75552483 | MS.gene065925:intron | 35.0% | |
TGCAACCTGAAAATTGTTGA+AGG | - | chr6.2:75552831-75552850 | None:intergenic | 35.0% | |
TGCAGCATTTCTTAAACTAC+AGG | - | chr6.2:75553128-75553147 | None:intergenic | 35.0% | |
TTAGTGCATGTTTGGTATCA+CGG | + | chr6.2:75552163-75552182 | MS.gene065925:intron | 35.0% | |
TTTCCTCTAATGACATCTTC+TGG | + | chr6.2:75553646-75553665 | MS.gene065925:intron | 35.0% | |
! | ACATCTCTAAAAACAGGAAC+TGG | - | chr6.2:75552344-75552363 | None:intergenic | 35.0% |
! | CCATTGATTGTTTGACAAAG+TGG | + | chr6.2:75552222-75552241 | MS.gene065925:intron | 35.0% |
! | TGGATGACATCTCTAAAAAC+AGG | - | chr6.2:75552350-75552369 | None:intergenic | 35.0% |
!! | AGCATAGTACATTTTGAGTC+AGG | - | chr6.2:75553356-75553375 | None:intergenic | 35.0% |
!! | ATTTTGATGATTGTAGGAGG+AGG | + | chr6.2:75551987-75552006 | MS.gene065925:intron | 35.0% |
!! | GAAACTATTCGGTGTATGTT+TGG | - | chr6.2:75552539-75552558 | None:intergenic | 35.0% |
!! | TTGTTGGTTCAGCAAAATCA+TGG | + | chr6.2:75552480-75552499 | MS.gene065925:intron | 35.0% |
!!! | CATACGTTTTTCAAGAAACG+TGG | + | chr6.2:75552078-75552097 | MS.gene065925:CDS | 35.0% |
AAGCCTTTGCCTTCTGATTT+CGG | - | chr6.2:75554073-75554092 | None:intergenic | 40.0% | |
ACTCACATCATCTGATATGC+TGG | - | chr6.2:75551881-75551900 | None:intergenic | 40.0% | |
AGAACAAAGAACACATCCAG+AGG | - | chr6.2:75552913-75552932 | None:intergenic | 40.0% | |
ATGTTTGAATAGGCCAATGG+AGG | + | chr6.2:75552304-75552323 | MS.gene065925:intron | 40.0% | |
CAATATGTTAGCTGCAAAGG+AGG | + | chr6.2:75554006-75554025 | MS.gene065925:intron | 40.0% | |
CAATGAGAACAAGGTGAAAG+GGG | - | chr6.2:75554146-75554165 | None:intergenic | 40.0% | |
CAGGATAAAGAATTTCTCCG+TGG | - | chr6.2:75553337-75553356 | None:intergenic | 40.0% | |
CATTATCACTCTCCTTGTAC+TGG | - | chr6.2:75551840-75551859 | None:intergenic | 40.0% | |
CCAAGATTTGAATCCCATTG+TGG | + | chr6.2:75552857-75552876 | MS.gene065925:CDS | 40.0% | |
CCACAATGGGATTCAAATCT+TGG | - | chr6.2:75552860-75552879 | None:intergenic | 40.0% | |
GACACAACAGACTCTTAAGA+GGG | + | chr6.2:75553668-75553687 | MS.gene065925:intron | 40.0% | |
GACTTAAAGGCTTAAGTCCA+CGG | + | chr6.2:75553317-75553336 | MS.gene065925:intron | 40.0% | |
TCGGTGTATGTTTGGATGAA+CGG | - | chr6.2:75552531-75552550 | None:intergenic | 40.0% | |
TGATCTTCCTGCTGAAAGAA+AGG | + | chr6.2:75553570-75553589 | MS.gene065925:CDS | 40.0% | |
TGTCCAGAAGATGTCATTAG+AGG | - | chr6.2:75553652-75553671 | None:intergenic | 40.0% | |
TTCCAGTGAAATCCAGTACA+AGG | + | chr6.2:75551825-75551844 | MS.gene065925:CDS | 40.0% | |
TTGCTGAACCAACAAAGAGT+AGG | - | chr6.2:75552475-75552494 | None:intergenic | 40.0% | |
! | AGTTTTCCAGATGCCTGAAA+AGG | - | chr6.2:75554214-75554233 | None:intergenic | 40.0% |
! | GCATGCCTTCAACAATTTTC+AGG | + | chr6.2:75552823-75552842 | MS.gene065925:intron | 40.0% |
!! | TATTCACCTTTTCAGGCATC+TGG | + | chr6.2:75554205-75554224 | MS.gene065925:intron | 40.0% |
AGATCACCTTCTTAGGAGCA+TGG | - | chr6.2:75552370-75552389 | None:intergenic | 45.0% | |
CACGTAGTTTCACAGACACA+AGG | - | chr6.2:75552266-75552285 | None:intergenic | 45.0% | |
CATGGAGCCTAACCATGATT+CGG | - | chr6.2:75552440-75552459 | None:intergenic | 45.0% | |
CTAATCGGTATGTTCACCTC+TGG | + | chr6.2:75552894-75552913 | MS.gene065925:intron | 45.0% | |
CTCCTTGTACTGGATTTCAC+TGG | - | chr6.2:75551830-75551849 | None:intergenic | 45.0% | |
GGAAGAGATATTGAAGGAGC+TGG | + | chr6.2:75552008-75552027 | MS.gene065925:CDS | 45.0% | |
GGACACAACAGACTCTTAAG+AGG | + | chr6.2:75553667-75553686 | MS.gene065925:intron | 45.0% | |
GGAGGAGGAAGAGATATTGA+AGG | + | chr6.2:75552002-75552021 | MS.gene065925:intron | 45.0% | |
TAATTTACGGGCTCATGGAG+AGG | + | chr6.2:75552641-75552660 | MS.gene065925:intron | 45.0% | |
TACTGGATTTCACTGGAACC+TGG | - | chr6.2:75551823-75551842 | None:intergenic | 45.0% | |
TGCATGTTTGGTATCACGGT+GGG | + | chr6.2:75552167-75552186 | MS.gene065925:intron | 45.0% | |
TGTCATCCATGCTCCTAAGA+AGG | + | chr6.2:75552361-75552380 | MS.gene065925:CDS | 45.0% | |
TGTTTGCAGCCGAAATCAGA+AGG | + | chr6.2:75554061-75554080 | MS.gene065925:intron | 45.0% | |
TTGCAGAACGCTCGATCTAA+CGG | + | chr6.2:75552051-75552070 | MS.gene065925:CDS | 45.0% | |
TTGTCGACAGGTCTAGCATA+TGG | - | chr6.2:75554295-75554314 | None:intergenic | 45.0% | |
! | TTCTTGCTACTAGCCTCCAT+TGG | - | chr6.2:75552320-75552339 | None:intergenic | 45.0% |
!!! | TTGAGGCAGAGATTTTGGCT+AGG | + | chr6.2:75553876-75553895 | MS.gene065925:CDS | 45.0% |
AAGCTCGGAAGTGGAATTCC+AGG | + | chr6.2:75551802-75551821 | MS.gene065925:CDS | 50.0% | |
ACAGAGAGAAGCTGCAAAGG+AGG | + | chr6.2:75553910-75553929 | MS.gene065925:CDS | 50.0% | |
CAGAGAGAAGCTGCAAAGGA+GGG | + | chr6.2:75553911-75553930 | MS.gene065925:CDS | 50.0% | |
CAGCCGAAATCAGAAGGCAA+AGG | + | chr6.2:75554067-75554086 | MS.gene065925:intron | 50.0% | |
GAGACAGAGAGAAGCTGCAA+AGG | + | chr6.2:75553907-75553926 | MS.gene065925:CDS | 50.0% | |
GAGGAAGAGAAATGCTGCGA+AGG | + | chr6.2:75554255-75554274 | MS.gene065925:CDS | 50.0% | |
GCTGGCTGATGTAACGTTTG+AGG | + | chr6.2:75552026-75552045 | MS.gene065925:CDS | 50.0% | |
GTGCATGTTTGGTATCACGG+TGG | + | chr6.2:75552166-75552185 | MS.gene065925:intron | 50.0% | |
TCGATTTCACTTCTGCGCTC+TGG | - | chr6.2:75553714-75553733 | None:intergenic | 50.0% | |
TGCAGAACGCTCGATCTAAC+GGG | + | chr6.2:75552052-75552071 | MS.gene065925:CDS | 50.0% | |
! | AGACTGGCCGAATCATGGTT+AGG | + | chr6.2:75552430-75552449 | MS.gene065925:intron | 50.0% |
!!! | GTTTTGGTTGGCGTTGAGAC+TGG | + | chr6.2:75552414-75552433 | MS.gene065925:intron | 50.0% |
TTTACGGGCTCATGGAGAGG+AGG | + | chr6.2:75552644-75552663 | MS.gene065925:intron | 55.0% | |
! | CGTTGAGACTGGCCGAATCA+TGG | + | chr6.2:75552425-75552444 | MS.gene065925:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 75551796 | 75554321 | 75551796 | ID=MS.gene065925 |
chr6.2 | mRNA | 75551796 | 75554321 | 75551796 | ID=MS.gene065925.t1;Parent=MS.gene065925 |
chr6.2 | exon | 75551796 | 75551894 | 75551796 | ID=MS.gene065925.t1.exon1;Parent=MS.gene065925.t1 |
chr6.2 | CDS | 75551796 | 75551894 | 75551796 | ID=cds.MS.gene065925.t1;Parent=MS.gene065925.t1 |
chr6.2 | exon | 75552003 | 75552136 | 75552003 | ID=MS.gene065925.t1.exon2;Parent=MS.gene065925.t1 |
chr6.2 | CDS | 75552003 | 75552136 | 75552003 | ID=cds.MS.gene065925.t1;Parent=MS.gene065925.t1 |
chr6.2 | exon | 75552316 | 75552382 | 75552316 | ID=MS.gene065925.t1.exon3;Parent=MS.gene065925.t1 |
chr6.2 | CDS | 75552316 | 75552382 | 75552316 | ID=cds.MS.gene065925.t1;Parent=MS.gene065925.t1 |
chr6.2 | exon | 75552845 | 75552900 | 75552845 | ID=MS.gene065925.t1.exon4;Parent=MS.gene065925.t1 |
chr6.2 | CDS | 75552845 | 75552900 | 75552845 | ID=cds.MS.gene065925.t1;Parent=MS.gene065925.t1 |
chr6.2 | exon | 75553537 | 75553591 | 75553537 | ID=MS.gene065925.t1.exon5;Parent=MS.gene065925.t1 |
chr6.2 | CDS | 75553537 | 75553591 | 75553537 | ID=cds.MS.gene065925.t1;Parent=MS.gene065925.t1 |
chr6.2 | exon | 75553678 | 75553752 | 75553678 | ID=MS.gene065925.t1.exon6;Parent=MS.gene065925.t1 |
chr6.2 | CDS | 75553678 | 75553752 | 75553678 | ID=cds.MS.gene065925.t1;Parent=MS.gene065925.t1 |
chr6.2 | exon | 75553842 | 75553959 | 75553842 | ID=MS.gene065925.t1.exon7;Parent=MS.gene065925.t1 |
chr6.2 | CDS | 75553842 | 75553959 | 75553842 | ID=cds.MS.gene065925.t1;Parent=MS.gene065925.t1 |
chr6.2 | exon | 75554070 | 75554116 | 75554070 | ID=MS.gene065925.t1.exon8;Parent=MS.gene065925.t1 |
chr6.2 | CDS | 75554070 | 75554116 | 75554070 | ID=cds.MS.gene065925.t1;Parent=MS.gene065925.t1 |
chr6.2 | exon | 75554220 | 75554321 | 75554220 | ID=MS.gene065925.t1.exon9;Parent=MS.gene065925.t1 |
chr6.2 | CDS | 75554220 | 75554321 | 75554220 | ID=cds.MS.gene065925.t1;Parent=MS.gene065925.t1 |
Gene Sequence |
Protein sequence |