AlfalfaGEDB | MS.gene065992

M. sativa cultivar XinJiangDaYe / MS.gene065992

KEGG: K14416
GO: GO:0000166 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0097159 GO:0097367 GO:1901265 GO:1901363
PFAM: PF00009.30 PF03143.20 PF03144.28

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065992.t1	XP_003629886.2	95.4	779	34	2	1	779	1	777	0.00E+00	1425.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065992.t1	Q2KHZ2	41.4	522	293	5	260	774	169	684	1.2e-101	372.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065992.t1	G7L804	95.4	779	34	2	1	779	1	777	0.0e+00	1425.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene058159	MS.gene065992	0.804487	2.11E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065992.t1	MTR_8g087950	96.534	779	25	2	1	779	1	777	0.0	1545
MS.gene065992.t1	MTR_8g087950	97.581	620	15	0	160	779	85	704	0.0	1231
MS.gene065992.t1	MTR_8g087950	88.372	86	8	2	1	86	1	84	4.12e-43	167
MS.gene065992.t1	MTR_1g495705	36.259	433	267	6	350	779	7	433	2.39e-89	288
MS.gene065992.t1	MTR_1g095650	36.259	433	267	6	350	779	7	433	2.39e-89	288
MS.gene065992.t1	MTR_1g095703	36.028	433	268	6	350	779	7	433	3.75e-89	288
MS.gene065992.t1	MTR_4g014810	35.748	428	267	5	350	774	7	429	5.83e-88	285
MS.gene065992.t1	MTR_6g021800	35.797	433	269	6	350	779	7	433	7.34e-88	285
MS.gene065992.t1	MTR_6g021805	35.797	433	269	6	350	779	7	433	7.34e-88	285
MS.gene065992.t1	MTR_6g080420	34.325	504	301	11	288	772	21	513	7.62e-85	279
MS.gene065992.t1	MTR_1g013680	35.321	436	270	7	350	779	7	436	1.66e-84	276
MS.gene065992.t1	MTR_1g085410	35.335	433	271	6	350	779	7	433	5.19e-81	266
MS.gene065992.t1	MTR_1g024175	35.377	424	266	5	351	771	8	426	5.70e-81	267
MS.gene065992.t1	MTR_8g106700	36.709	474	283	11	307	772	4	468	1.06e-79	264
MS.gene065992.t1	MTR_8g106700	37.762	429	253	8	351	772	53	474	2.04e-78	261
MS.gene065992.t1	MTR_8g106700	37.587	431	255	8	351	774	74	497	2.64e-78	261
MS.gene065992.t1	MTR_8g014590	34.579	428	272	5	351	774	8	431	4.42e-77	256
MS.gene065992.t1	MTR_1g101870	36.364	429	260	7	349	774	6	424	2.69e-76	263
MS.gene065992.t1	MTR_1g101870	36.364	429	260	7	349	774	6	424	3.52e-76	264
MS.gene065992.t1	MTR_8g008740	41.026	312	177	4	353	662	11	317	1.08e-67	232
MS.gene065992.t1	MTR_5g037350	32.181	463	269	6	349	771	16	473	7.09e-67	232
MS.gene065992.t1	MTR_2g080210	32.319	427	251	5	350	774	9	399	2.76e-64	221
MS.gene065992.t1	MTR_2g082730	32.333	433	264	8	346	771	3	413	4.56e-64	223
MS.gene065992.t1	MTR_1g089520	31.435	439	271	9	345	777	3	417	1.44e-60	214
MS.gene065992.t1	MTR_8g013910	31.591	440	258	10	350	770	7	422	2.75e-58	205
MS.gene065992.t1	MTR_1g095650	31.953	338	221	6	445	779	1	332	4.82e-51	182
MS.gene065992.t1	MTR_2g082665	29.561	433	250	8	346	771	3	387	2.86e-49	181
MS.gene065992.t1	MTR_2g037420	27.972	429	258	6	351	774	8	390	5.19e-45	168
MS.gene065992.t1	MTR_1g101880	50.000	148	73	1	351	498	8	154	1.14e-41	153
MS.gene065992.t1	MTR_1g024165	51.079	139	67	1	351	489	12	149	1.43e-39	143
MS.gene065992.t1	MTR_7g094460	28.986	483	277	18	304	775	21	448	2.46e-33	134
MS.gene065992.t1	MTR_3g076660	28.989	445	251	16	350	776	92	489	7.37e-32	130
MS.gene065992.t1	MTR_2g021300	29.296	355	205	11	336	680	36	354	1.02e-31	129
MS.gene065992.t1	MTR_8g014950	43.878	98	55	0	350	447	8	105	1.50e-23	96.3
MS.gene065992.t1	MTR_4g079360	26.119	268	157	8	352	612	59	292	9.26e-12	68.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene065992.t1	AT5G10630	56.504	738	270	9	43	777	48	737	0.0	814
MS.gene065992.t1	AT5G10630	55.811	740	277	8	43	777	48	742	0.0	810
MS.gene065992.t1	AT5G10630	59.325	622	209	5	158	777	88	667	0.0	733
MS.gene065992.t1	AT5G10630	59.325	622	209	5	158	777	87	666	0.0	733
MS.gene065992.t1	AT5G10630	59.325	622	209	5	158	777	88	667	0.0	733
MS.gene065992.t1	AT5G60390	36.215	428	265	5	350	774	7	429	2.64e-87	283
MS.gene065992.t1	AT5G60390	36.215	428	265	5	350	774	7	429	2.64e-87	283
MS.gene065992.t1	AT5G60390	36.215	428	265	5	350	774	7	429	2.64e-87	283
MS.gene065992.t1	AT1G07920	36.215	428	265	5	350	774	7	429	2.64e-87	283
MS.gene065992.t1	AT1G07940	36.215	428	265	5	350	774	7	429	2.64e-87	283
MS.gene065992.t1	AT1G07940	36.215	428	265	5	350	774	7	429	2.64e-87	283
MS.gene065992.t1	AT1G07940	36.215	428	265	5	350	774	7	429	2.64e-87	283
MS.gene065992.t1	AT1G07940	36.215	428	265	5	350	774	7	429	2.64e-87	283
MS.gene065992.t1	AT1G07930	36.215	428	265	5	350	774	7	429	2.64e-87	283
MS.gene065992.t1	AT1G18070	35.581	430	267	6	351	775	102	526	2.79e-81	270
MS.gene065992.t1	AT1G18070	35.581	430	267	6	351	775	102	526	2.79e-81	270
MS.gene065992.t1	AT1G18070	34.694	441	267	7	351	775	102	537	5.41e-78	261
MS.gene065992.t1	AT1G07930	45.161	248	130	3	350	595	7	250	2.89e-67	227
MS.gene065992.t1	AT4G20360	28.315	445	254	16	350	776	79	476	2.93e-35	140
MS.gene065992.t1	AT4G20360	28.315	445	254	16	350	776	79	476	2.93e-35	140
MS.gene065992.t1	AT4G02930	28.604	437	251	15	350	775	67	453	4.03e-30	125
MS.gene065992.t1	AT2G31060	26.619	278	165	7	341	612	50	294	1.82e-15	80.9
MS.gene065992.t1	AT2G31060	26.950	282	163	8	341	612	50	298	2.66e-15	80.5
MS.gene065992.t1	AT1G45332	32.335	167	90	7	334	500	53	196	2.05e-11	68.2
MS.gene065992.t1	AT2G45030	31.977	172	94	7	329	500	48	196	2.36e-11	67.8
MS.gene065992.t1	AT5G13650	27.899	276	151	11	352	618	85	321	7.47e-11	66.2
MS.gene065992.t1	AT5G13650	27.899	276	151	11	352	618	84	320	7.72e-11	66.2

Find 152 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGGCCTACATTCTTCAAAAT+TGG	0.138581	4.3:-13135509	MS.gene065992:CDS
TTTATCCCAAACATGATTTC+TGG	0.174281	4.3:-13134382	MS.gene065992:CDS
TGGAAATATCACAACCTCTT+TGG	0.241546	4.3:+13136170	None:intergenic
TATAAAATCAAATCGGTCTT+TGG	0.261931	4.3:+13134189	None:intergenic
CCAAACTCCAGGTGGCTTAA+TGG	0.264147	4.3:+13137817	None:intergenic
ATGGTCTCTTTCTTTGTATC+AGG	0.265545	4.3:+13137836	None:intergenic
TTGTTCTTCCTAAAGATCTA+AGG	0.277201	4.3:+13130707	None:intergenic
TGCCATGGAAAATCAAAATT+TGG	0.281045	4.3:-13134095	MS.gene065992:CDS
TAGGTTGGTCATGTTGATTC+TGG	0.286553	4.3:-13134731	MS.gene065992:CDS
CCATTAAGCCACCTGGAGTT+TGG	0.317368	4.3:-13137817	MS.gene065992:CDS
GGAAATATCACAACCTCTTT+GGG	0.319630	4.3:+13136171	None:intergenic
TGGTAGGTTATTACACCTAT+TGG	0.325002	4.3:-13134693	MS.gene065992:CDS
AGAGAGTGATAAACTTAGTT+TGG	0.329770	4.3:-13135025	MS.gene065992:CDS
TTATCACTCTCTTCAACTTT+TGG	0.331231	4.3:+13135036	None:intergenic
AGAGTATCCCTTAGATCTTT+AGG	0.333295	4.3:-13130715	MS.gene065992:CDS
GGTGTCTGCTTGTGGGAAAC+TGG	0.341397	4.3:-13132283	MS.gene065992:CDS
TGAAAAGGAGGCCAAGTTAC+AGG	0.354078	4.3:-13134639	MS.gene065992:intron
TATTCCCCTTTCCCTTTCTT+CGG	0.355806	4.3:+13134483	None:intergenic
TCTGGAAAATCAACACTATC+TGG	0.356467	4.3:-13134713	MS.gene065992:CDS
TTGGTCACCTTACCAGTCTT+GGG	0.356517	4.3:+13130947	None:intergenic
TCATTGTGAAACAGGTATAC+TGG	0.358470	4.3:-13132414	MS.gene065992:intron
TTTGGTCACCTTACCAGTCT+TGG	0.360911	4.3:+13130946	None:intergenic
GCACAACTTATTAGAAGTTT+CGG	0.362581	4.3:-13134262	MS.gene065992:CDS
AAATGCTTTGCAACTGCAAC+AGG	0.363737	4.3:+13131171	None:intergenic
TGTTGCAGTTGCAAAGCATT+TGG	0.363927	4.3:-13131169	MS.gene065992:CDS
GCATAGTTTCCTTTGTCCTT+TGG	0.368485	4.3:+13135138	None:intergenic
GAAGTTGAATCTGAAAATTA+TGG	0.370235	4.3:-13137967	MS.gene065992:intron
CACCTGAGCGCCGATCAATA+TGG	0.377052	4.3:+13131113	None:intergenic
TCAAAGATTCTTCTCTCTCA+TGG	0.378500	4.3:-13134129	MS.gene065992:CDS
GATTTGATAACATCACATAT+TGG	0.379852	4.3:+13132321	None:intergenic
ATGCCGCGTAAAGTAAACTA+TGG	0.383974	4.3:-13138039	MS.gene065992:CDS
GGCCTACATTCTTCAAAATT+GGG	0.384535	4.3:-13135508	MS.gene065992:CDS
CCAGTATGAACCACATCATC+TGG	0.394923	4.3:+13135529	None:intergenic
GTGAAGACCTATATTTAAAG+AGG	0.395003	4.3:+13136041	None:intergenic
GTTGTCTGCACTTTCAGTAT+TGG	0.398903	4.3:+13135257	None:intergenic
AGAATTTCATGAAATTCATA+AGG	0.403160	4.3:-13136085	MS.gene065992:CDS
CCAGATGATGTGGTTCATAC+TGG	0.403541	4.3:-13135529	MS.gene065992:CDS
GGTAGGTTATTACACCTATT+GGG	0.413223	4.3:-13134692	MS.gene065992:CDS
AAGGATCCTTTGCTTATGCT+TGG	0.413794	4.3:-13134522	MS.gene065992:CDS
CATGCTCTCGTCATTGTCAT+AGG	0.414774	4.3:+13137778	None:intergenic
AGGATCCTTTGCTTATGCTT+GGG	0.420061	4.3:-13134521	MS.gene065992:CDS
ACCTGAGCGCCGATCAATAT+GGG	0.424114	4.3:+13131114	None:intergenic
GTAGCTCCAGAAATCATGTT+TGG	0.427200	4.3:+13134376	None:intergenic
TCTTGGAAATTCGTCCCAAT+AGG	0.427436	4.3:+13134678	None:intergenic
TATACTGGACCTTATCTGTT+AGG	0.427875	4.3:-13132399	MS.gene065992:CDS
GCCTGCTCTGTTGCAAGAGC+TGG	0.427988	4.3:-13131273	MS.gene065992:CDS
GTTGTTGTGCTTGACTCTCC+TGG	0.435036	4.3:-13134415	MS.gene065992:CDS
AACTGTGTGGTTAAAACTGC+TGG	0.439302	4.3:+13134969	None:intergenic
GTTATGCCTTCAGATGTTGT+TGG	0.441394	4.3:-13131327	MS.gene065992:CDS
GAATTTCATGAAATTCTCCT+TGG	0.443794	4.3:+13136091	None:intergenic
TGGCGTTCTACGTCATCCCT+TGG	0.445519	4.3:-13137738	MS.gene065992:CDS
GAAATTGATCTCGAAACAAT+TGG	0.448800	4.3:-13135192	MS.gene065992:CDS
CGTCATCCCTTGGTTATCAA+TGG	0.450703	4.3:-13137728	MS.gene065992:CDS
GAACTTTGAGATCTTGCATC+AGG	0.458431	4.3:+13134946	None:intergenic
TCCCATATTGATCGGCGCTC+AGG	0.462273	4.3:-13131115	MS.gene065992:intron
ACCTCCAACATCAACAAAAC+AGG	0.463396	4.3:-13137701	MS.gene065992:intron
ATGACTTGCTGTGATATTTG+TGG	0.468111	4.3:-13137758	MS.gene065992:CDS
CTTGTTATAGATGCCTCACT+TGG	0.468135	4.3:-13134334	MS.gene065992:CDS
GGAGTTGAAATTGCTTGTCT+TGG	0.469748	4.3:-13131148	MS.gene065992:CDS
GTCATTGTCATAGGTGCAAA+TGG	0.471526	4.3:+13137787	None:intergenic
TAGCTCCAGAAATCATGTTT+GGG	0.472643	4.3:+13134377	None:intergenic
TTGATGAAAGTTCCGAAGAA+AGG	0.474986	4.3:-13134495	MS.gene065992:CDS
CGGTGAAATTACCTGTAACT+TGG	0.479336	4.3:+13134628	None:intergenic
GCAACTGCAACAGGAAAGTC+AGG	0.482006	4.3:+13131180	None:intergenic
TCACTTGGTGCATTTGAAGC+TGG	0.485978	4.3:-13134319	MS.gene065992:CDS
AGCCATCCCTCTTTAAATAT+AGG	0.486162	4.3:-13136048	MS.gene065992:intron
TTCTGATAATACTAATGCTA+AGG	0.487271	4.3:-13134926	MS.gene065992:CDS
TTAGGAAGAACAATAGCTGT+TGG	0.488448	4.3:-13130697	MS.gene065992:CDS
GTAACGTTGCATGGTGTTGA+TGG	0.492360	4.3:-13131237	MS.gene065992:CDS
GAAGATATAAACAAAACTCC+TGG	0.493719	4.3:-13136243	MS.gene065992:CDS
GATGTCTTATAAAATCAAAT+CGG	0.494118	4.3:+13134182	None:intergenic
TGATGAAAGTTCCGAAGAAA+GGG	0.495673	4.3:-13134494	MS.gene065992:CDS
TGGTGCATTTGAAGCTGGTA+TGG	0.496309	4.3:-13134314	MS.gene065992:CDS
AAGGACAGGTGTCTGCTTGT+GGG	0.496837	4.3:-13132290	MS.gene065992:CDS
TTGAAATTGCTTGTCTTGGA+TGG	0.504009	4.3:-13131144	MS.gene065992:CDS
TCTTCAAAATTGGGTTTGAA+AGG	0.509780	4.3:-13135499	MS.gene065992:intron
TTTCTTACCAGCCAGAAAAG+TGG	0.510046	4.3:-13134888	MS.gene065992:CDS
TCCAGCTCTTGCAACAGAGC+AGG	0.514025	4.3:+13131272	None:intergenic
TTACTACGACGATGACTATG+AGG	0.515875	4.3:-13138010	MS.gene065992:CDS
AAAACAAAGTGCGGTAATTG+AGG	0.516048	4.3:-13130900	MS.gene065992:intron
CAAATCAACTGCACAAGGAC+AGG	0.517566	4.3:-13132304	MS.gene065992:CDS
TATAGTTGCAGTAAATAAGA+TGG	0.519968	4.3:-13134227	MS.gene065992:CDS
AATAACCATGACAGTGGCTG+TGG	0.522889	4.3:-13134464	MS.gene065992:CDS
GCTGGTATGGATGGCGGCAA+AGG	0.523737	4.3:-13134301	MS.gene065992:CDS
GACCTATATTTAAAGAGGGA+TGG	0.530219	4.3:+13136046	None:intergenic
TGGGCCAACTTGGATGCTCC+AGG	0.530831	4.3:+13136225	None:intergenic
TGTTGATGGAAGTCTTGTAT+TGG	0.530937	4.3:-13131223	MS.gene065992:CDS
GGAATGTTTCTCCGCTCATG+TGG	0.531170	4.3:-13134154	MS.gene065992:CDS
ACCTCTTTGGGACTCTGTTG+TGG	0.535011	4.3:+13136183	None:intergenic
GATGGAAGTCTTGTATTGGC+TGG	0.535690	4.3:-13131219	MS.gene065992:CDS
TGTTCTTCCTAAAGATCTAA+GGG	0.536816	4.3:+13130708	None:intergenic
CAATCAAGCAAAGAAAAGTC+CGG	0.537201	4.3:-13135075	MS.gene065992:CDS
CAGTATGAACCACATCATCT+GGG	0.538586	4.3:+13135530	None:intergenic
GCTTGTGGGAAACTGGAAGC+AGG	0.540683	4.3:-13132276	MS.gene065992:CDS
AATATTCTTGAAACTCTAGC+AGG	0.541627	4.3:+13130983	None:intergenic
GATGGAACATCAAACTTGAA+AGG	0.555871	4.3:+13135553	None:intergenic
TCTGATAATACTAATGCTAA+GGG	0.556699	4.3:-13134925	MS.gene065992:CDS
TCAGTACTTGATCCCAAGAC+TGG	0.558515	4.3:-13130959	MS.gene065992:CDS
GGGATAAAATCTTTATGACC+AGG	0.560214	4.3:+13134397	None:intergenic
TTTGCGAATTCTCTAGTAGG+AGG	0.562911	4.3:+13132357	None:intergenic
CAAGGACAGGTGTCTGCTTG+TGG	0.563524	4.3:-13132291	MS.gene065992:CDS
ATGGATTCCCTTGAGTGCCA+TGG	0.565826	4.3:-13134110	MS.gene065992:CDS
ATGGAGCAACTCCAAACTCC+AGG	0.566999	4.3:+13137806	None:intergenic
TGAAGACCTATATTTAAAGA+GGG	0.572542	4.3:+13136042	None:intergenic
AAAGTTCCGAAGAAAGGGAA+AGG	0.572545	4.3:-13134489	MS.gene065992:CDS
GCATTTGAAGCTGGTATGGA+TGG	0.575093	4.3:-13134310	MS.gene065992:CDS
AAGTTCCGAAGAAAGGGAAA+GGG	0.576526	4.3:-13134488	MS.gene065992:CDS
GAAAATCAACACTATCTGGT+AGG	0.578600	4.3:-13134709	MS.gene065992:CDS
TGGTAGTGCAGACAAACTAC+CGG	0.582720	4.3:+13135056	None:intergenic
TCAACTGCACCTAACAGATA+AGG	0.583815	4.3:+13132390	None:intergenic
AACTCCTGGAGCATCCAAGT+TGG	0.584320	4.3:-13136229	MS.gene065992:CDS
AGTTTGGCTTCTAACAAAGA+CGG	0.587145	4.3:-13135009	MS.gene065992:CDS
ACTTGATCCCAAGACTGGTA+AGG	0.592506	4.3:-13130954	MS.gene065992:CDS
GAATGTTTCTCCGCTCATGT+GGG	0.593120	4.3:-13134153	MS.gene065992:CDS
TGTTCCATCCCCAGATGATG+TGG	0.594773	4.3:-13135539	MS.gene065992:CDS
TGTTGGAACAGTACGTACAT+TGG	0.595815	4.3:-13131310	MS.gene065992:CDS
TCACATATTGGCATTAGCAG+AGG	0.599164	4.3:+13132333	None:intergenic
AAAGAGACCATTAAGCCACC+TGG	0.599671	4.3:-13137824	MS.gene065992:CDS
GGTACAAGTCCCATATTGAT+CGG	0.599737	4.3:-13131123	MS.gene065992:CDS
GAAAACTCTACCACACAGAC+TGG	0.600136	4.3:+13130757	None:intergenic
CTTATCAGCATCTTTGCCAA+AGG	0.600455	4.3:-13135154	MS.gene065992:CDS
AGCTTCAAATGCACCAAGTG+AGG	0.601580	4.3:+13134321	None:intergenic
TACAAGCTTGAGAATGTCCA+AGG	0.604749	4.3:-13136108	MS.gene065992:CDS
CTGCAACAGGAAAGTCAGGA+TGG	0.610280	4.3:+13131184	None:intergenic
AATGTAGCTGTAACGTTGCA+TGG	0.611588	4.3:-13131246	MS.gene065992:CDS
ATATTTCCAATGCAAGACGT+TGG	0.614432	4.3:-13136156	MS.gene065992:CDS
ACTGTTCCAACAACATCTGA+AGG	0.615264	4.3:+13131321	None:intergenic
GAAGCAGGAGCTCTTCGAAG+TGG	0.618457	4.3:-13132261	MS.gene065992:CDS
GTGGTTCCATTGATAACCAA+GGG	0.621078	4.3:+13137722	None:intergenic
ATATGCCACAGCCACTGTCA+TGG	0.621453	4.3:+13134459	None:intergenic
TATTTACTGCAACTATAACA+TGG	0.621754	4.3:+13134233	None:intergenic
GCATCTTTGCCAAAGGACAA+AGG	0.623123	4.3:-13135147	MS.gene065992:CDS
AGTTCCGAAGAAAGGGAAAG+GGG	0.633252	4.3:-13134487	MS.gene065992:CDS
GCCACAACAGAGTCCCAAAG+AGG	0.634314	4.3:-13136184	MS.gene065992:CDS
ATTCCATAGTTTACTTTACG+CGG	0.636455	4.3:+13138036	None:intergenic
TGAACCACATCATCTGGGGA+TGG	0.637515	4.3:+13135535	None:intergenic
AATGTATCTTCAGATTGTTG+AGG	0.644877	4.3:+13134859	None:intergenic
TTTGAAATGAGCATCAGAAG+GGG	0.646193	4.3:+13134066	None:intergenic
GGTGGTTCCATTGATAACCA+AGG	0.649942	4.3:+13137721	None:intergenic
AATCTTTGAACCCACATGAG+CGG	0.652547	4.3:+13134143	None:intergenic
AAGTGCCCAAGCATAAGCAA+AGG	0.652690	4.3:+13134516	None:intergenic
TGGTAAGAAACTTGTTGATG+AGG	0.658411	4.3:+13134901	None:intergenic
AGCTCTTCGAAGTGGAACAA+AGG	0.662831	4.3:-13132253	MS.gene065992:intron
GGAAGTCTTGTATTGGCTGG+AGG	0.667406	4.3:-13131216	MS.gene065992:CDS
AGTATGAACCACATCATCTG+GGG	0.679020	4.3:+13135531	None:intergenic
GAGCAACTCCAAACTCCAGG+TGG	0.686375	4.3:+13137809	None:intergenic
TCTCACGTCAAAACAAAGTG+CGG	0.695925	4.3:-13130909	MS.gene065992:CDS
GTTATCAAATCAACTGCACA+AGG	0.705068	4.3:-13132309	MS.gene065992:CDS
AAGGGGAATAACCATGACAG+TGG	0.707209	4.3:-13134470	MS.gene065992:CDS
TTTGAAGCTGGTATGGATGG+CGG	0.707438	4.3:-13134307	MS.gene065992:CDS
TTTGCACGAGCCAGTCTGTG+TGG	0.717109	4.3:-13130767	MS.gene065992:CDS
ATCTTGCATCAGGAACTGTG+TGG	0.809595	4.3:+13134956	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	13130663	13138061	13130663	ID=MS.gene065992
chr4.3	mRNA	13130663	13138061	13130663	ID=MS.gene065992.t1;Parent=MS.gene065992
chr4.3	exon	13137968	13138061	13137968	ID=MS.gene065992.t1.exon1;Parent=MS.gene065992.t1
chr4.3	CDS	13137968	13138061	13137968	ID=cds.MS.gene065992.t1;Parent=MS.gene065992.t1
chr4.3	exon	13137702	13137866	13137702	ID=MS.gene065992.t1.exon2;Parent=MS.gene065992.t1
chr4.3	CDS	13137702	13137866	13137702	ID=cds.MS.gene065992.t1;Parent=MS.gene065992.t1
chr4.3	exon	13136049	13136267	13136049	ID=MS.gene065992.t1.exon3;Parent=MS.gene065992.t1
chr4.3	CDS	13136049	13136267	13136049	ID=cds.MS.gene065992.t1;Parent=MS.gene065992.t1
chr4.3	exon	13135500	13135577	13135500	ID=MS.gene065992.t1.exon4;Parent=MS.gene065992.t1
chr4.3	CDS	13135500	13135577	13135500	ID=cds.MS.gene065992.t1;Parent=MS.gene065992.t1
chr4.3	exon	13134837	13135345	13134837	ID=MS.gene065992.t1.exon5;Parent=MS.gene065992.t1
chr4.3	CDS	13134837	13135345	13134837	ID=cds.MS.gene065992.t1;Parent=MS.gene065992.t1
chr4.3	exon	13134640	13134750	13134640	ID=MS.gene065992.t1.exon6;Parent=MS.gene065992.t1
chr4.3	CDS	13134640	13134750	13134640	ID=cds.MS.gene065992.t1;Parent=MS.gene065992.t1
chr4.3	exon	13134061	13134548	13134061	ID=MS.gene065992.t1.exon7;Parent=MS.gene065992.t1
chr4.3	CDS	13134061	13134548	13134061	ID=cds.MS.gene065992.t1;Parent=MS.gene065992.t1
chr4.3	exon	13132254	13132422	13132254	ID=MS.gene065992.t1.exon8;Parent=MS.gene065992.t1
chr4.3	CDS	13132254	13132422	13132254	ID=cds.MS.gene065992.t1;Parent=MS.gene065992.t1
chr4.3	exon	13131116	13131355	13131116	ID=MS.gene065992.t1.exon9;Parent=MS.gene065992.t1
chr4.3	CDS	13131116	13131355	13131116	ID=cds.MS.gene065992.t1;Parent=MS.gene065992.t1
chr4.3	exon	13130901	13131035	13130901	ID=MS.gene065992.t1.exon10;Parent=MS.gene065992.t1
chr4.3	CDS	13130901	13131035	13130901	ID=cds.MS.gene065992.t1;Parent=MS.gene065992.t1
chr4.3	exon	13130663	13130794	13130663	ID=MS.gene065992.t1.exon11;Parent=MS.gene065992.t1
chr4.3	CDS	13130663	13130794	13130663	ID=cds.MS.gene065992.t1;Parent=MS.gene065992.t1

Gene Sequence

>MS.gene065992

ATGCCGCGTAAAGTAAACTATGGAATCGATTACTACGACGATGACTATGAGGATTATGATGACTATGATTATGAAGTTGAATCTGAAAATTATGGTCACTTTCTTTTTCTTAGTTTTTAATTACTACTCGTTTTTACTTAGCTTTTTACAATTCTCATAGCATTTTTGTTGTTTGTGTTATTAAATAAGCAGGAGTAGAACAACCTGATACAAAGAAAGAGACCATTAAGCCACCTGGAGTTTGGAGTTGCTCCATTTGCACCTATGACAATGACGAGAGCATGACTTGCTGTGATATTTGTGGCGTTCTACGTCATCCCTTGGTTATCAATGGAACCACCTCCAACATCAACAAAACAGGTAAATCCATTTATTCATTAATAGTAATTTAATTTAGTTTAGTACTAGGTCTAAGGAGGGAATGAAGTAATCAAATACTGTTTGTTTGAACTTCCTGTTGCTCTTATGGAGAAACTGTCCAAGTTCTATGTCCATGTGGCCGGGGTGCATGGTGGAATGTTCACCCCGTTAAAGTTGTTATTGAACGAATCCATCCTGCCAGTTTGTAGTTGAAGTTCTTGTCGTGGTACATGACCTAGTTTGCGTACTTGTGGAGTTTCTCGAGGTGGGGGCCCAAATATGGGAAGTAGAGGAACTTTGCAGTGGAGCAGAATTCGGTAGGCGCATGTAGAGTGATCGCTGGCGCTGCTGTGTCCATTACACATAATGTTGATGTTTTCTCCAGCAAGAACAATGGCTTTAGACATCCGTTGCAGATCTCTTTTTCTCAATACCAAATCACAAATGCCTTCGGTGAATGGTTTACAAACCGTCAAATTAGTAAATTGTGTTATTAATTATTCTATTGAAATCCTCTAATTACAGGGAACTGTAAAAAGCAACGGAAGAGGGCTTTGTAGAGTTTTTAAAAATTCCCAAACCCTTCTCCTGTTTTTTAAAAACTCCCAAACTAGTGGAGAGCCTGCTTATCATAACCCTCTGCCCTCGAAAACACTTCCGAGACAAAGCTTTATTGTCTTAGGTAAGGAGTAAAGATGCCTCATTGATTGGCTTGTTTGATATGGAATATCAAACTCTTTGATCATGCTATTATTTCTGATATGGGAAGATGGGATTTGGAATCTATTGGAATTTGAAGTTTCTAAACTCAATCAACTCCATTACTATGAAAAACAAGTTATTAATGTGTAAAATGATATAAAATTCGTGGGATTCGTTACTTTCCATGTCACATCTTTTAGAAGGTATTGCAGTGGTTGCTATTGAATTCTGATATTTTTTCCCTTCGCGACAAATGCTTCCATCAAATAAAGTTGTAGTTTCAGACTTTCAGTGTAAATAGTTGACTATCATGATTCATGACTCTACAGCTCAGTGCTGGTCACTATGACGCTACTGCCTTAGTTGAGTGTGCTATTATCATGATCCTGTATCCCAACCCTTAAGTGGATCTGAGTGACAATTTCGTTTATAGGGCTATTAGAGAAAGGCAAGCCAAACCAAACTGTACCTCATAGGTTTTTCTGCAAGAGCAGAAGGATGACCGATGAATTAAAATAACCAAGCAAAATTGATAATTAACTGGTCTTGGATTTCGTGATAGTCGTTGTCCTGGTTTTGACAACTTAAAGGGAATTTGACTATAGGCAAATTTCAAAAGAATAGCTGAGATCTTAAACTTTGGCTCTCTGTATATCCCACATTGTATAGTGCTAGGTTTACAACAATGGACATGATATGCCTATAACCCGCTGAAAAATCTCTTTGATGCAGTTGAAGATATAAACAAAACTCCTGGAGCATCCAAGTTGGCCCAGTCTCTTTTTCAATCATTGCCACAACAGAGTCCCAAAGAGGTTGTGATATTTCCAATGCAAGACGTTGGTTTTTGGACAGATGGCAGTAACATCTACAAGCTTGAGAATGTCCAAGGAGAATTTCATGAAATTCATAAGGCTTTTAATGCTCAAAGCCATCCCTCTTTAAATATAGGTCTTCACAAGTTTTAAAATATATTTGTAGAAGTAGTGTAGTTTCTACGATATTTGACTTTTATGTAATACTTCCTCCATCTCATATTAAATGTCTTTTAAGGTTATAAAGCGTACTAATTTCCATGATAAAACCAGCTTCATTGACTAAAATATCCTTATTAATAAAATAGTTAGGTGGACTGTGATAGAATAAATAAGGGTAGTATTAGTAGAAATAGGTAAGTAATGCTTCGTTTGTATTCTAAAATGATAAACAATATGAAACAAGCAAATATTCCAAGCATTACACTTAATATGAGACGGAAGGAGTACTAATTAGAATAAAAGATCTTATTAGGTGAAGTTTTGAGTTTGTTTTAATGATGTGCTATGTTTTAGTTTTTGGAACTCCTTGTACATGAGAGCAAACCTTACATAACCATTTATTTTTAAACAATAGTGATCAAATCTTTTTTATTGGAGTGGACAGATCCTTTCAAGTTTGATGTTCCATCCCCAGATGATGTGGTTCATACTGGCCTACATTCTTCAAAATTGGGTTTGAAAGGTAGCCCTCCCTCAACCTATCTGTCTTCAGGCTGTAACTTTGACACCCTAGCTTTAACCAAAAAAAAAAGTAGATTTTCCCCCATATTTAGTTTTTTCATGTTTTAGTTCCTTTTGGATAAATATTGATGTATCATATTTCACTATGCTTTCAGACAAAGTTAAAAACTCTAAAGATTCTCGGCTTTCATCAAGCAGCAGAGAGAAGAATGAACTAGAATCCAATACTGAAAGTGCAGACAACTTATCGTCTTTAATGCAAAAGAACAAGCTTTCCAAAAATGTAGAAATTGATCTCGAAACAATTGGTAAAACTTCAAACATCTTATCAGCATCTTTGCCAAAGGACAAAGGAAACTATGCGAATAAAATAAATTCTTCAAAAAATGGTACAAATGGCATTCAATCAAGCAAAGAAAAGTCCGGTAGTTTGTCTGCACTACCAAAAGTTGAAGAGAGTGATAAACTTAGTTTGGCTTCTAACAAAGACGGAAAGTCTGAAAGTGCTTCCAGCAGTTTTAACCACACAGTTCCTGATGCAAGATCTCAAAGTTCTGATAATACTAATGCTAAGGGACCTCATCAACAAGTTTCTTACCAGCCAGAAAAGTGGATGCTTCCTCAACAATCTGAAGATACATTGACTCAGTTGAATCTCGCAATTGTACGCAAATGACCTATTCTTTCATATATCCCAGGACTATATTTCAAGGAAGAAATGTCTCACAGTGCTTAATCTGTTAATTGTAGGTTGGTCATGTTGATTCTGGAAAATCAACACTATCTGGTAGGTTATTACACCTATTGGGACGAATTTCCAAGAAAGAAATGCACAAAAATGAAAAGGAGGCCAAGTTACAGGTAATTTCACCGTGGAGTCATTTTTATTTTTTGGTGCTTGATGCTTATGAATTCATGTGTCTATTTCTGCTTCCTCGTCTCTTTTAATCAGGGCAAAGGATCCTTTGCTTATGCTTGGGCACTTGATGAAAGTTCCGAAGAAAGGGAAAGGGGAATAACCATGACAGTGGCTGTGGCATATTTTGACACTAAGAAATATCACGTTGTTGTGCTTGACTCTCCTGGTCATAAAGATTTTATCCCAAACATGATTTCTGGAGCTACACAAGCTGATGCTGCAGTTCTTGTTATAGATGCCTCACTTGGTGCATTTGAAGCTGGTATGGATGGCGGCAAAGGACAAACAAGAGAGCATGCACAACTTATTAGAAGTTTCGGTGTAGACCATGTTATAGTTGCAGTAAATAAGATGGATGCTGTGTCATACTCCAAAGACCGATTTGATTTTATAAGACATCAGCTGGGAATGTTTCTCCGCTCATGTGGGTTCAAAGATTCTTCTCTCTCATGGATTCCCTTGAGTGCCATGGAAAATCAAAATTTGGTAGCATCCCCTTCTGATGCTCATTTCAAAAACTGGTATGTCACTGATTACTCTAGATGTGATCTTAACTTCCCTTGGTGGGCATTAGACTATAATTTTTTAAAAATGTTTTTGAATTGTTGGCTATTGCATATAACCAAGACATTTGTTGAGTTTTTCAATCATGCTTTTGTTTATTAGGTTTTTAGTCCTATAGGGTTAATTAAGTTTTTGGCTATTGCATAAGACCATTTACTTAATTAACCCTACTTAATTAACCCTATAGGGTTAATTAAGTTTTTAATCCCTATAAATATTCACAGTTTTGTTTTTAGTCCCTACAAAATAAAACCCTATAGGGTTAATATATTATGATTTAGACTAAAATTCTATAATTTGTGTTTACAATTTTTTTTTTTTTTTGTAAATTGTGATTATTATAGTTATAAATTATTGAAGAATGATCAATGTCTCTTTCTTTACAAGTATTCTATATTTGTGTGTGTGTGTGTGTGTATTTTAATTTTGTTAACGTATCTTAGGCCATATCGTATTCTGAGTTAAAAAAATCCGTATCCTCGTATCTGTATCATATTATACCCATAGCTGTACTATGTATCCGGGCTTCATAGATGGTGACATAAGAGTAGTTTGACAACTCTCGAAGCTAGTATAGAACTTCTTCTAAACAACTCATAAATTCATATTATTTTGTAATTAGATTTAACTCAAACTTAGCATGCTAATGGACTTACCCCAATAATCATTCTAAATCTAATGGTAAAATTGGATAGTTTGACAACTCTCAAAAACTTACTCAGAACTATTTTAAATAAACTATTCATATAAGTTCAGATTATTATGTAGTTAGTTTTAACTTAATCTTAGTTTAGTGGAACCCAACTTAAATGGTTTCCCAAGGAGCCGGTTTATCTCTAAATTGGCTGCCACAAGTAGCATATGCAGCCATTTTGTTAATTGTGTTAGTTCCAGAAAGACTGGCTTCACACAGTTTCTTGCATATATAATTTATTTTGCTTTACTTTAATATCTCACCTTGGTAGAAATAGCTATGTGCGTACCTTGTAATGAATTTGTAAATCCCACCTCAGAAAGGCTGAACTTCCTCTATTTCTGAAGCATAAAACAGCTATGTAGAAAGTTTAACGGTCTCACAGAAGGCATCTTATTTTCTGTAAACCCTATTTGATCCGTTTAGCTTAGTCGCCTAATGCTTGCCTGTTGTTGCTGCTTTGAAATCCCAATTGAGAAAATAGATTTTGGCCATATTGATTTATTAGTATGTTTTCCTTCTCACCTTGATTTATGGTTCTCATATTTTAATTGCAAAAAAGTCCAATTTATACCCTCCAACTGAACCTACTTTGGTCCTAAAACCTAACTTAATATGTGCAGCGCGAGTCCTAATCTTTCTGACATGCAGTACATATTTGTCCATCTGTTTTATTCAGTCAAACTCTAAAGGATATTGTTACACTCTAATCATGTTACTGTACTAATTTTTTTGTAGAAATGTCAAATTTACCCAAATCAAAATTAGGGTCACATGCACTTTGGTCTTGAAACTTAAGAAAATCAAACCAAAGAATGATTATTTGATAGGAAATCAAACTGAGTGCATCTATGCATTTTATAGTATGCTAAAACTTGATGGTTGTTTCATTGTGAAACAGGTATACTGGACCTTATCTGTTAGGTGCAGTTGACTCACTACAACCTCCTACTAGAGAATTCGCAAAACCTCTGCTAATGCCAATATGTGATGTTATCAAATCAACTGCACAAGGACAGGTGTCTGCTTGTGGGAAACTGGAAGCAGGAGCTCTTCGAAGTGGAACAAAGGTATAAAACTGGATTGTGCTGTGACTAATTTACTATAACTGAAAAACCAAATGAAAGATTCACACTAATAATTAAAATTAGAAGTGTTTTGTACTGATCTAAAACCAAGTTTCTTCTGATAGGAATTAATAACTTCCCGTTAAAGTTAGTCGCTCACACCCAATGCTTTCATTGTGTTTATTTAGTTTTTTCTTTATCAACATGTTCATTTTCGTCCATTAATTTACAAATTACATCAAATCACCTGTTTATTTGTTTCCGTCATCGTGATTTTCCATTCAAATTTTTATTTTAAAATTTTTGGCATGACAGTCACAAAAACTATTTTTTCATGCAAGACTACCACATGAATAGCCATAGGGACTTCTTTTCATGCAAGACTACCACATGAATAGCCATAGGGACTTCTTTATTTTTTATTTTTTAAAATTATGTCACAATTTAAATATTTAACAAAATAATTTGGATGAAGAATTACTATATAGACAATTTTGTATATAGTTGTTAAATTGAGAGACTAAAGTAAATTATAAAATTTGGAAAAGGACAACTGAAAATACAAGGACAGCAAGTTTCATCAGGATGATGAAACAAAAGTACTTGATGAACTCATTTTATGTAGTTCTTCGCAAATGTGCCTTTTTCCCAGGTCCATAAATGTTTTTCCAGCTATTCCTTGTTCTGAAGCATAAATGTTTGCTTGCCCGATCATTTTTTTGTATCAATTCCATGTTCAATCATGGGCCTATGGCCTACCTCTTGGATCAGGATCCCATCATATTTAAAAATAAACATGGCAAACTATTTCTTGTAATATGTGGTCAGTTATGCTCAAGTTCTTCTTAACATGGCTTGAAATGAAATATTTCTTGCTAACTGTACACCTTAATAATTATAGGTGCTAGTTATGCCTTCAGATGTTGTTGGAACAGTACGTACATTGGAGCGTGACTCTAACGCCTGCTCTGTTGCAAGAGCTGGAGATAATGTAGCTGTAACGTTGCATGGTGTTGATGGAAGTCTTGTATTGGCTGGAGGCGTATTATGCCATCCTGACTTTCCTGTTGCAGTTGCAAAGCATTTGGAGTTGAAATTGCTTGTCTTGGATGGTACAAGTCCCATATTGATCGGCGCTCAGGTGTGCTTTATTCCCTGCACTTTATTTTTTAATATTGCTTATTGGGATAAATGTCAATTTTCTTTTTTCTATATTGGCAGTTAGAGTTTCACATACATCATGCAAAAGAGCCTGCTAGAGTTTCAAGAATATTGTCAGTACTTGATCCCAAGACTGGTAAGGTGACCAAAAAGAACCCTCGTTGTCTCACGTCAAAACAAAGTGCGGTAATTGAGGTGAATAACATAGCTAAACTTGTAATTTCAAATGTGAACACATGAATATCTTTTCGTCTACAGTGCAACTGACTCAAAGCTGGCTTCTATTGTTTCTAATATTCAGGTGATTTTGCACGAGCCAGTCTGTGTGGTAGAGTTTTCTAGATGTAAAGCTCTTGGAAGAGTATCCCTTAGATCTTTAGGAAGAACAATAGCTGTTGGACTTGTGTCAAGAATAATCGAAGAACAAGATTAG

Protein sequence

>MS.gene065992.t1

MPRKVNYGIDYYDDDYEDYDDYDYEVESENYVEQPDTKKETIKPPGVWSCSICTYDNDESMTCCDICGVLRHPLVINGTTSNINKTVEDINKTPGASKLAQSLFQSLPQQSPKEVVIFPMQDVGFWTDGSNIYKLENVQGEFHEIHKAFNAQSHPSLNIDPFKFDVPSPDDVVHTGLHSSKLGLKDKVKNSKDSRLSSSSREKNELESNTESADNLSSLMQKNKLSKNVEIDLETIGKTSNILSASLPKDKGNYANKINSSKNGTNGIQSSKEKSGSLSALPKVEESDKLSLASNKDGKSESASSSFNHTVPDARSQSSDNTNAKGPHQQVSYQPEKWMLPQQSEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKEMHKNEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFIPNMISGATQADAAVLVIDASLGAFEAGMDGGKGQTREHAQLIRSFGVDHVIVAVNKMDAVSYSKDRFDFIRHQLGMFLRSCGFKDSSLSWIPLSAMENQNLVASPSDAHFKNWYTGPYLLGAVDSLQPPTREFAKPLLMPICDVIKSTAQGQVSACGKLEAGALRSGTKVLVMPSDVVGTVRTLERDSNACSVARAGDNVAVTLHGVDGSLVLAGGVLCHPDFPVAVAKHLELKLLVLDGTSPILIGAQLEFHIHHAKEPARVSRILSVLDPKTGKVTKKNPRCLTSKQSAVIEVILHEPVCVVEFSRCKALGRVSLRSLGRTIAVGLVSRIIEEQD