Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066241.t1 | XP_003592154.1 | 77.9 | 290 | 7 | 1 | 17 | 249 | 7 | 296 | 1.70E-117 | 432.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066241.t1 | P36908 | 68.3 | 284 | 31 | 3 | 24 | 249 | 11 | 293 | 9.2e-101 | 367.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066241.t1 | G7ID31 | 77.9 | 290 | 7 | 1 | 17 | 249 | 7 | 296 | 1.2e-117 | 432.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060282 | MS.gene066241 | 0.83064 | 2.62E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066241.t1 | MTR_1g099310 | 77.931 | 290 | 7 | 2 | 17 | 249 | 7 | 296 | 8.19e-153 | 427 |
| MS.gene066241.t1 | MTR_1g099290 | 65.398 | 289 | 42 | 4 | 17 | 247 | 8 | 296 | 2.36e-120 | 355 |
| MS.gene066241.t1 | MTR_8g055940 | 52.577 | 291 | 78 | 5 | 17 | 249 | 9 | 297 | 7.72e-95 | 280 |
| MS.gene066241.t1 | MTR_0027s0260 | 52.234 | 291 | 80 | 5 | 17 | 249 | 9 | 298 | 7.62e-94 | 278 |
| MS.gene066241.t1 | MTR_1g099320 | 53.957 | 278 | 67 | 6 | 32 | 249 | 21 | 297 | 3.72e-89 | 266 |
| MS.gene066241.t1 | MTR_5g043550 | 51.027 | 292 | 81 | 5 | 17 | 249 | 6 | 294 | 3.22e-88 | 263 |
| MS.gene066241.t1 | MTR_8g467650 | 47.635 | 296 | 92 | 6 | 15 | 249 | 5 | 298 | 5.54e-78 | 237 |
| MS.gene066241.t1 | MTR_7g116350 | 46.690 | 287 | 80 | 6 | 22 | 249 | 12 | 284 | 3.35e-74 | 241 |
| MS.gene066241.t1 | MTR_1g099350 | 46.763 | 278 | 85 | 7 | 31 | 249 | 18 | 291 | 4.77e-72 | 222 |
| MS.gene066241.t1 | MTR_7g116850 | 45.704 | 291 | 94 | 7 | 22 | 249 | 37 | 326 | 1.96e-71 | 221 |
| MS.gene066241.t1 | MTR_2g102020 | 43.771 | 297 | 95 | 9 | 24 | 249 | 18 | 313 | 4.92e-64 | 203 |
| MS.gene066241.t1 | MTR_6g023340 | 55.030 | 169 | 70 | 4 | 29 | 193 | 20 | 186 | 1.67e-59 | 190 |
| MS.gene066241.t1 | MTR_6g023340 | 56.897 | 58 | 24 | 1 | 193 | 249 | 245 | 302 | 1.74e-11 | 63.2 |
| MS.gene066241.t1 | MTR_2g040830 | 42.199 | 282 | 97 | 8 | 31 | 249 | 22 | 300 | 3.59e-58 | 187 |
| MS.gene066241.t1 | MTR_2g040690 | 42.199 | 282 | 97 | 8 | 31 | 249 | 24 | 302 | 4.27e-58 | 187 |
| MS.gene066241.t1 | MTR_2g040740 | 55.152 | 165 | 69 | 4 | 30 | 192 | 21 | 182 | 4.39e-51 | 169 |
| MS.gene066241.t1 | MTR_2g040850 | 40.708 | 226 | 97 | 4 | 30 | 246 | 21 | 218 | 2.99e-46 | 154 |
| MS.gene066241.t1 | MTR_2g040650 | 37.589 | 282 | 106 | 9 | 31 | 249 | 22 | 296 | 6.37e-43 | 148 |
| MS.gene066241.t1 | MTR_2g040870 | 48.125 | 160 | 79 | 3 | 25 | 183 | 13 | 169 | 1.09e-41 | 140 |
| MS.gene066241.t1 | MTR_2g040890 | 42.169 | 166 | 85 | 5 | 18 | 175 | 4 | 166 | 1.54e-33 | 120 |
| MS.gene066241.t1 | MTR_4g063180 | 41.117 | 197 | 72 | 7 | 44 | 240 | 30 | 182 | 2.24e-28 | 106 |
| MS.gene066241.t1 | MTR_4g077310 | 78.182 | 55 | 11 | 1 | 192 | 246 | 37 | 90 | 5.18e-21 | 84.7 |
| MS.gene066241.t1 | MTR_2g040880 | 54.386 | 57 | 26 | 0 | 193 | 249 | 61 | 117 | 7.34e-13 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066241.t1 | AT5G24090 | 47.267 | 311 | 90 | 7 | 1 | 249 | 4 | 302 | 6.20e-86 | 258 |
Find 61 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAACCTTCATTTCCATTT+TGG | 0.201244 | 1.1:-71496985 | None:intergenic |
| GACCTTGCAAGAGCACTTAA+TGG | 0.258905 | 1.1:+71497364 | MS.gene066241:CDS |
| TGCAGGAATTGCTGTCTATT+GGG | 0.293692 | 1.1:+71496961 | MS.gene066241:CDS |
| CTGCAGGAATTGCTGTCTAT+TGG | 0.299764 | 1.1:+71496960 | MS.gene066241:CDS |
| TTACCTATGGAACAATTTCT+TGG | 0.301794 | 1.1:+71497255 | MS.gene066241:CDS |
| ACCATTAGGTGATGCTGTTT+TGG | 0.309129 | 1.1:+71497297 | MS.gene066241:CDS |
| ATCAAGGGTTCTGCTAAATA+TGG | 0.352843 | 1.1:+71497626 | MS.gene066241:CDS |
| CTCTCTCTCGGAGGTGGTGC+CGG | 0.355247 | 1.1:+71497187 | MS.gene066241:CDS |
| AATATGGTGGTGTCATGATT+TGG | 0.364242 | 1.1:+71497642 | MS.gene066241:CDS |
| GGCCAGCAAGGTTTAGAGTT+GGG | 0.367643 | 1.1:-71497084 | None:intergenic |
| TCAGGTTCTTCCTGCTATCA+AGG | 0.374119 | 1.1:+71497610 | MS.gene066241:CDS |
| AAACTTTGTGCAACCGTTTG+AGG | 0.377387 | 1.1:-71497119 | None:intergenic |
| ACCCCAACTCTAAACCTTGC+TGG | 0.394335 | 1.1:+71497082 | MS.gene066241:CDS |
| CAAGGTTTAGAGTTGGGGTT+TGG | 0.398633 | 1.1:-71497078 | None:intergenic |
| GCTGTCTATTGGGGCCAAAA+TGG | 0.403140 | 1.1:+71496971 | MS.gene066241:CDS |
| CAGCATGAGAGGATTTGAAC+AGG | 0.421892 | 1.1:-71496940 | None:intergenic |
| TACCTATGGAACAATTTCTT+GGG | 0.439074 | 1.1:+71497256 | MS.gene066241:CDS |
| ACGTCATCTTCAAGACCATT+AGG | 0.446236 | 1.1:+71497283 | MS.gene066241:CDS |
| TGGGTATAGTAATGCTATCA+AGG | 0.449430 | 1.1:+71497688 | MS.gene066241:CDS |
| ATATGGTGGTGTCATGATTT+GGG | 0.457395 | 1.1:+71497643 | MS.gene066241:CDS |
| TCCAAAACAGCATCACCTAA+TGG | 0.457612 | 1.1:-71497298 | None:intergenic |
| TTTGTGCAACCGTTTGAGGC+TGG | 0.457856 | 1.1:-71497115 | None:intergenic |
| ATCAAAGTGTTGCTCTCTCT+CGG | 0.468652 | 1.1:+71497175 | MS.gene066241:CDS |
| TTCAAATCCTCTCATGCTGC+AGG | 0.481583 | 1.1:+71496944 | MS.gene066241:CDS |
| ACAGGGAAATGAGGAAAAGA+GGG | 0.491765 | 1.1:-71496922 | None:intergenic |
| AACAGGGAAATGAGGAAAAG+AGG | 0.492417 | 1.1:-71496923 | None:intergenic |
| GCCAGCAAGGTTTAGAGTTG+GGG | 0.492427 | 1.1:-71497083 | None:intergenic |
| CAGGTTCTTCCTGCTATCAA+GGG | 0.501869 | 1.1:+71497611 | MS.gene066241:CDS |
| CACAGGTTGCAAATTACCTA+TGG | 0.509878 | 1.1:+71497242 | MS.gene066241:CDS |
| TTAGCAGAACCCTTGATAGC+AGG | 0.515382 | 1.1:-71497620 | None:intergenic |
| CTATGGAACAATTTCTTGGG+TGG | 0.517482 | 1.1:+71497259 | MS.gene066241:CDS |
| TGGGGCCAAAATGGAAATGA+AGG | 0.518821 | 1.1:+71496980 | MS.gene066241:CDS |
| ATTTGGGATAGATTCAATGA+TGG | 0.518849 | 1.1:+71497659 | MS.gene066241:CDS |
| GGTTTGGCCATTGCCAAAAG+TGG | 0.520401 | 1.1:-71497062 | None:intergenic |
| TGAGAGTTCAAAACATCAGC+AGG | 0.521909 | 1.1:-71497590 | None:intergenic |
| AGGATTTGAACAGGGAAATG+AGG | 0.523284 | 1.1:-71496931 | None:intergenic |
| GTGTTGCTCTCTCTCGGAGG+TGG | 0.537411 | 1.1:+71497181 | MS.gene066241:CDS |
| GCAGGAATTGCTGTCTATTG+GGG | 0.539336 | 1.1:+71496962 | MS.gene066241:CDS |
| TGAGGAAAGAGAGTAGCTTC+CGG | 0.540465 | 1.1:-71497206 | None:intergenic |
| CATTGTGATCCAGCCTCAAA+CGG | 0.541735 | 1.1:+71497106 | MS.gene066241:CDS |
| TGGCCAGCAAGGTTTAGAGT+TGG | 0.542841 | 1.1:-71497085 | None:intergenic |
| AGCAATTCCTGCAGCATGAG+AGG | 0.550272 | 1.1:-71496951 | None:intergenic |
| CTCAGCTGATGATGCCACAC+AGG | 0.550683 | 1.1:+71497225 | MS.gene066241:CDS |
| AACCATTAAGTGCTCTTGCA+AGG | 0.563162 | 1.1:-71497366 | None:intergenic |
| GGAGCAGCAGCATCATTAGC+AGG | 0.564812 | 1.1:-71497551 | None:intergenic |
| AGATTCAATGATGGACAAAG+TGG | 0.579005 | 1.1:+71497668 | MS.gene066241:CDS |
| CACCCAAGAAATTGTTCCAT+AGG | 0.580557 | 1.1:-71497258 | None:intergenic |
| CTGGATCACAATGGCCAGCA+AGG | 0.581308 | 1.1:-71497096 | None:intergenic |
| GATGCTGCTGCTCCAAGTGG+TGG | 0.591043 | 1.1:+71497560 | MS.gene066241:CDS |
| GGGTATAGTAATGCTATCAA+GGG | 0.607448 | 1.1:+71497689 | MS.gene066241:CDS |
| GCAGGAATAAAACCACCACT+TGG | 0.623738 | 1.1:-71497572 | None:intergenic |
| AAGGGTTCTGCTAAATATGG+TGG | 0.631653 | 1.1:+71497629 | MS.gene066241:CDS |
| ATTCAAACTTGTCAAAGCAA+CGG | 0.634122 | 1.1:+71497151 | MS.gene066241:CDS |
| CTGTGTGGCATCATCAGCTG+AGG | 0.646251 | 1.1:-71497224 | None:intergenic |
| TGTGTTGCAAGCATCTGCTA+AGG | 0.648082 | 1.1:-71497005 | None:intergenic |
| AATGATGCTGCTGCTCCAAG+TGG | 0.649731 | 1.1:+71497557 | MS.gene066241:CDS |
| GATTCAATGATGGACAAAGT+GGG | 0.659679 | 1.1:+71497669 | MS.gene066241:CDS |
| AGCATGAGAGGATTTGAACA+GGG | 0.680167 | 1.1:-71496939 | None:intergenic |
| TAGGTAATTTGCAACCTGTG+TGG | 0.691863 | 1.1:-71497239 | None:intergenic |
| AAAGTGTTGCTCTCTCTCGG+AGG | 0.693552 | 1.1:+71497178 | MS.gene066241:CDS |
| CGTTTGAGGCTGGATCACAA+TGG | 0.735602 | 1.1:-71497105 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGATTTTGATATTGAAGC+TGG | + | chr1.1:71497325-71497344 | MS.gene066241:CDS | 25.0% |
| !!! | TTAATGGTTTTAGTTCACAA+AGG | + | chr1.1:71497380-71497399 | MS.gene066241:CDS | 25.0% |
| ATTCAAACTTGTCAAAGCAA+CGG | + | chr1.1:71497151-71497170 | MS.gene066241:CDS | 30.0% | |
| CTAACAATCTTGTTAATGCT+TGG | + | chr1.1:71497483-71497502 | MS.gene066241:intron | 30.0% | |
| TACCTATGGAACAATTTCTT+GGG | + | chr1.1:71497256-71497275 | MS.gene066241:CDS | 30.0% | |
| TTACCTATGGAACAATTTCT+TGG | + | chr1.1:71497255-71497274 | MS.gene066241:CDS | 30.0% | |
| TTGTTAATGCTTGGAATCAA+TGG | + | chr1.1:71497492-71497511 | MS.gene066241:intron | 30.0% | |
| ! | ATAGCTTTTCTATCCACTTT+TGG | + | chr1.1:71497049-71497068 | MS.gene066241:CDS | 30.0% |
| ! | ATTTGGGATAGATTCAATGA+TGG | + | chr1.1:71497659-71497678 | MS.gene066241:CDS | 30.0% |
| ! | CAAGCTAAACAAGTGTTTTT+AGG | + | chr1.1:71497524-71497543 | MS.gene066241:intron | 30.0% |
| ATCAAGGGTTCTGCTAAATA+TGG | + | chr1.1:71497626-71497645 | MS.gene066241:CDS | 35.0% | |
| GGGTATAGTAATGCTATCAA+GGG | + | chr1.1:71497689-71497708 | MS.gene066241:CDS | 35.0% | |
| TAGTGTTTCCACTTGAGTAT+TGG | - | chr1.1:71497466-71497485 | None:intergenic | 35.0% | |
| TGGGTATAGTAATGCTATCA+AGG | + | chr1.1:71497688-71497707 | MS.gene066241:CDS | 35.0% | |
| ! | AGGAACCTTCATTTCCATTT+TGG | - | chr1.1:71496988-71497007 | None:intergenic | 35.0% |
| !! | AATATGGTGGTGTCATGATT+TGG | + | chr1.1:71497642-71497661 | MS.gene066241:CDS | 35.0% |
| !! | AGATTCAATGATGGACAAAG+TGG | + | chr1.1:71497668-71497687 | MS.gene066241:CDS | 35.0% |
| !! | ATATGGTGGTGTCATGATTT+GGG | + | chr1.1:71497643-71497662 | MS.gene066241:CDS | 35.0% |
| !! | GATTCAATGATGGACAAAGT+GGG | + | chr1.1:71497669-71497688 | MS.gene066241:CDS | 35.0% |
| !! | GATTTTGATATTGAAGCTGG+TGG | + | chr1.1:71497328-71497347 | MS.gene066241:CDS | 35.0% |
| !! | TTTCTATCCACTTTTGGCAA+TGG | + | chr1.1:71497055-71497074 | MS.gene066241:CDS | 35.0% |
| AAACTTTGTGCAACCGTTTG+AGG | - | chr1.1:71497122-71497141 | None:intergenic | 40.0% | |
| AACAGGGAAATGAGGAAAAG+AGG | - | chr1.1:71496926-71496945 | None:intergenic | 40.0% | |
| AACCATTAAGTGCTCTTGCA+AGG | - | chr1.1:71497369-71497388 | None:intergenic | 40.0% | |
| AAGGGTTCTGCTAAATATGG+TGG | + | chr1.1:71497629-71497648 | MS.gene066241:CDS | 40.0% | |
| ACAGGGAAATGAGGAAAAGA+GGG | - | chr1.1:71496925-71496944 | None:intergenic | 40.0% | |
| ACGTCATCTTCAAGACCATT+AGG | + | chr1.1:71497283-71497302 | MS.gene066241:CDS | 40.0% | |
| ACTGAATCCAAATGAGCATC+AGG | - | chr1.1:71497442-71497461 | None:intergenic | 40.0% | |
| AGCATGAGAGGATTTGAACA+GGG | - | chr1.1:71496942-71496961 | None:intergenic | 40.0% | |
| AGGATTTGAACAGGGAAATG+AGG | - | chr1.1:71496934-71496953 | None:intergenic | 40.0% | |
| ATTCAGTGCCAATACTCAAG+TGG | + | chr1.1:71497455-71497474 | MS.gene066241:intron | 40.0% | |
| CACAGGTTGCAAATTACCTA+TGG | + | chr1.1:71497242-71497261 | MS.gene066241:CDS | 40.0% | |
| CACCCAAGAAATTGTTCCAT+AGG | - | chr1.1:71497261-71497280 | None:intergenic | 40.0% | |
| CTATGGAACAATTTCTTGGG+TGG | + | chr1.1:71497259-71497278 | MS.gene066241:CDS | 40.0% | |
| CTGAATCCAAATGAGCATCA+GGG | - | chr1.1:71497441-71497460 | None:intergenic | 40.0% | |
| TCCAAAACAGCATCACCTAA+TGG | - | chr1.1:71497301-71497320 | None:intergenic | 40.0% | |
| TGAGAGTTCAAAACATCAGC+AGG | - | chr1.1:71497593-71497612 | None:intergenic | 40.0% | |
| TGCAGGAATTGCTGTCTATT+GGG | + | chr1.1:71496961-71496980 | MS.gene066241:CDS | 40.0% | |
| ! | TAGGTAATTTGCAACCTGTG+TGG | - | chr1.1:71497242-71497261 | None:intergenic | 40.0% |
| !! | ACCATTAGGTGATGCTGTTT+TGG | + | chr1.1:71497297-71497316 | MS.gene066241:CDS | 40.0% |
| !! | ATCAAAGTGTTGCTCTCTCT+CGG | + | chr1.1:71497175-71497194 | MS.gene066241:CDS | 40.0% |
| !! | TGCTGATGTTTTGAACTCTC+AGG | + | chr1.1:71497592-71497611 | MS.gene066241:CDS | 40.0% |
| !!! | TTAGGTGATGCTGTTTTGGA+TGG | + | chr1.1:71497301-71497320 | MS.gene066241:CDS | 40.0% |
| CAGCATGAGAGGATTTGAAC+AGG | - | chr1.1:71496943-71496962 | None:intergenic | 45.0% | |
| CAGGTTCTTCCTGCTATCAA+GGG | + | chr1.1:71497611-71497630 | MS.gene066241:CDS | 45.0% | |
| CATTGTGATCCAGCCTCAAA+CGG | + | chr1.1:71497106-71497125 | MS.gene066241:CDS | 45.0% | |
| CTGCAGGAATTGCTGTCTAT+TGG | + | chr1.1:71496960-71496979 | MS.gene066241:CDS | 45.0% | |
| GCAGGAATAAAACCACCACT+TGG | - | chr1.1:71497575-71497594 | None:intergenic | 45.0% | |
| GCAGGAATTGCTGTCTATTG+GGG | + | chr1.1:71496962-71496981 | MS.gene066241:CDS | 45.0% | |
| TCAGGTTCTTCCTGCTATCA+AGG | + | chr1.1:71497610-71497629 | MS.gene066241:CDS | 45.0% | |
| TCCAAATGAGCATCAGGGTA+AGG | - | chr1.1:71497436-71497455 | None:intergenic | 45.0% | |
| TCCTTACCCTGATGCTCATT+TGG | + | chr1.1:71497432-71497451 | MS.gene066241:intron | 45.0% | |
| TGAGGAAAGAGAGTAGCTTC+CGG | - | chr1.1:71497209-71497228 | None:intergenic | 45.0% | |
| TGGGGCCAAAATGGAAATGA+AGG | + | chr1.1:71496980-71496999 | MS.gene066241:CDS | 45.0% | |
| TGTGTTGCAAGCATCTGCTA+AGG | - | chr1.1:71497008-71497027 | None:intergenic | 45.0% | |
| TTCAAATCCTCTCATGCTGC+AGG | + | chr1.1:71496944-71496963 | MS.gene066241:CDS | 45.0% | |
| ! | CAAGGTTTAGAGTTGGGGTT+TGG | - | chr1.1:71497081-71497100 | None:intergenic | 45.0% |
| ! | TTAGCAGAACCCTTGATAGC+AGG | - | chr1.1:71497623-71497642 | None:intergenic | 45.0% |
| !! | GACCTTGCAAGAGCACTTAA+TGG | + | chr1.1:71497364-71497383 | MS.gene066241:CDS | 45.0% |
| AATGATGCTGCTGCTCCAAG+TGG | + | chr1.1:71497557-71497576 | MS.gene066241:CDS | 50.0% | |
| ACCCCAACTCTAAACCTTGC+TGG | + | chr1.1:71497082-71497101 | MS.gene066241:CDS | 50.0% | |
| AGCAATTCCTGCAGCATGAG+AGG | - | chr1.1:71496954-71496973 | None:intergenic | 50.0% | |
| GCATCAGGGTAAGGACATTG+AGG | - | chr1.1:71497427-71497446 | None:intergenic | 50.0% | |
| GCTGTCTATTGGGGCCAAAA+TGG | + | chr1.1:71496971-71496990 | MS.gene066241:CDS | 50.0% | |
| GGTTTGGCCATTGCCAAAAG+TGG | - | chr1.1:71497065-71497084 | None:intergenic | 50.0% | |
| ! | CGTTTGAGGCTGGATCACAA+TGG | - | chr1.1:71497108-71497127 | None:intergenic | 50.0% |
| ! | GCCAGCAAGGTTTAGAGTTG+GGG | - | chr1.1:71497086-71497105 | None:intergenic | 50.0% |
| ! | GGCCAGCAAGGTTTAGAGTT+GGG | - | chr1.1:71497087-71497106 | None:intergenic | 50.0% |
| ! | TGGCCAGCAAGGTTTAGAGT+TGG | - | chr1.1:71497088-71497107 | None:intergenic | 50.0% |
| ! | TTTGTGCAACCGTTTGAGGC+TGG | - | chr1.1:71497118-71497137 | None:intergenic | 50.0% |
| !! | AAAGTGTTGCTCTCTCTCGG+AGG | + | chr1.1:71497178-71497197 | MS.gene066241:CDS | 50.0% |
| CTGGATCACAATGGCCAGCA+AGG | - | chr1.1:71497099-71497118 | None:intergenic | 55.0% | |
| CTGTGTGGCATCATCAGCTG+AGG | - | chr1.1:71497227-71497246 | None:intergenic | 55.0% | |
| GGAGCAGCAGCATCATTAGC+AGG | - | chr1.1:71497554-71497573 | None:intergenic | 55.0% | |
| ! | CTCAGCTGATGATGCCACAC+AGG | + | chr1.1:71497225-71497244 | MS.gene066241:CDS | 55.0% |
| GATGCTGCTGCTCCAAGTGG+TGG | + | chr1.1:71497560-71497579 | MS.gene066241:CDS | 60.0% | |
| ! | GTGTTGCTCTCTCTCGGAGG+TGG | + | chr1.1:71497181-71497200 | MS.gene066241:CDS | 60.0% |
| CTCTCTCTCGGAGGTGGTGC+CGG | + | chr1.1:71497187-71497206 | MS.gene066241:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 71496857 | 71497721 | 71496857 | ID=MS.gene066241 |
| chr1.1 | mRNA | 71496857 | 71497721 | 71496857 | ID=MS.gene066241.t1;Parent=MS.gene066241 |
| chr1.1 | exon | 71496857 | 71497430 | 71496857 | ID=MS.gene066241.t1.exon1;Parent=MS.gene066241.t1 |
| chr1.1 | CDS | 71496857 | 71497430 | 71496857 | ID=cds.MS.gene066241.t1;Parent=MS.gene066241.t1 |
| chr1.1 | exon | 71497546 | 71497721 | 71497546 | ID=MS.gene066241.t1.exon2;Parent=MS.gene066241.t1 |
| chr1.1 | CDS | 71497546 | 71497721 | 71497546 | ID=cds.MS.gene066241.t1;Parent=MS.gene066241.t1 |
| Gene Sequence |
| Protein sequence |
