AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066281

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066281.t1 MTR_5g038060 96.481 341 12 0 1 341 1 341 0.0 680
MS.gene066281.t1 MTR_5g038060 93.701 127 8 0 340 466 482 608 1.10e-77 254
MS.gene066281.t1 MTR_8g469480 68.421 323 95 1 34 356 41 356 5.86e-163 473
MS.gene066281.t1 MTR_8g469480 64.348 115 40 1 340 454 489 602 8.67e-45 165
MS.gene066281.t1 MTR_5g038190 50.450 333 159 3 16 348 13 339 1.77e-112 343
MS.gene066281.t1 MTR_5g038190 46.602 103 55 0 340 442 473 575 1.32e-26 113
MS.gene066281.t1 MTR_8g469470 50.602 332 158 4 10 340 15 341 2.42e-110 338
MS.gene066281.t1 MTR_8g469470 43.750 96 54 0 342 437 488 583 2.73e-22 100
MS.gene066281.t1 MTR_4g107510 51.198 334 147 7 17 340 14 341 1.18e-106 329
MS.gene066281.t1 MTR_4g107510 46.875 96 51 0 340 435 489 584 7.00e-24 105
MS.gene066281.t1 MTR_4g107580 47.590 332 162 6 16 341 6 331 4.13e-101 315
MS.gene066281.t1 MTR_4g107580 44.355 124 63 1 340 463 478 595 5.94e-29 120
MS.gene066281.t1 MTR_4g107530 45.748 341 179 3 1 340 3 338 1.12e-96 303
MS.gene066281.t1 MTR_4g107530 38.835 103 63 0 333 435 479 581 5.42e-19 90.1
MS.gene066281.t1 MTR_4g107610 43.714 350 184 6 4 348 2 343 1.43e-95 300
MS.gene066281.t1 MTR_4g107610 36.290 124 77 2 334 456 470 592 2.40e-19 91.3
MS.gene066281.t1 MTR_7g064780 41.905 315 172 4 31 340 26 334 1.16e-83 269
MS.gene066281.t1 MTR_7g064780 34.821 112 70 2 340 448 474 585 1.06e-15 80.1
MS.gene066281.t1 MTR_7g064800 40.432 324 180 5 29 345 24 341 6.46e-83 267
MS.gene066281.t1 MTR_5g055000 42.598 331 169 7 25 347 9 326 3.12e-77 252
MS.gene066281.t1 MTR_5g055000 44.660 103 56 1 334 435 458 560 4.08e-19 90.5
MS.gene066281.t1 MTR_1g026740 38.690 336 183 7 19 348 7 325 5.41e-76 248
MS.gene066281.t1 MTR_1g026740 37.634 93 58 0 340 432 461 553 3.06e-12 68.9
MS.gene066281.t1 MTR_2g101650 38.485 330 183 8 27 348 18 335 2.89e-74 244
MS.gene066281.t1 MTR_2g101650 28.571 217 131 5 244 454 377 575 3.84e-17 84.3
MS.gene066281.t1 MTR_7g088825 40.000 335 167 6 18 340 14 326 5.97e-74 244
MS.gene066281.t1 MTR_7g088825 36.697 109 66 2 335 442 466 572 9.83e-16 80.1
MS.gene066281.t1 MTR_1g009200 39.198 324 179 6 31 348 27 338 2.39e-72 239
MS.gene066281.t1 MTR_1g009200 43.011 93 53 0 340 432 472 564 6.56e-16 80.5
MS.gene066281.t1 MTR_7g088820 40.491 326 177 5 29 348 23 337 6.17e-72 238
MS.gene066281.t1 MTR_7g088820 39.474 114 64 3 338 448 472 583 5.71e-15 77.8
MS.gene066281.t1 MTR_7g088790 39.275 331 194 3 19 348 17 341 1.37e-70 235
MS.gene066281.t1 MTR_7g088790 40.000 120 67 3 335 451 473 590 3.09e-18 87.8
MS.gene066281.t1 MTR_8g103233 37.463 339 197 7 17 352 4 330 4.99e-70 233
MS.gene066281.t1 MTR_8g103233 36.842 152 87 3 315 461 431 578 7.87e-20 92.8
MS.gene066281.t1 MTR_1g026750 37.798 336 186 8 19 348 8 326 9.65e-69 229
MS.gene066281.t1 MTR_1g026750 33.945 109 69 1 340 448 462 567 3.56e-12 68.9
MS.gene066281.t1 MTR_2g101590 36.012 336 202 6 20 352 15 340 1.85e-68 230
MS.gene066281.t1 MTR_2g101590 28.426 197 122 6 265 454 400 584 5.63e-17 84.0
MS.gene066281.t1 MTR_1g026770 38.486 317 183 5 33 348 17 322 1.19e-67 226
MS.gene066281.t1 MTR_1g026770 35.484 93 60 0 340 432 458 550 2.07e-12 69.7
MS.gene066281.t1 MTR_7g067010 38.957 326 188 6 24 348 16 331 6.25e-67 224
MS.gene066281.t1 MTR_7g067010 45.455 99 54 0 340 438 466 564 1.90e-19 91.7
MS.gene066281.t1 MTR_4g015080 39.252 321 181 6 30 348 33 341 1.05e-65 221
MS.gene066281.t1 MTR_4g015080 45.833 96 52 0 340 435 476 571 8.86e-19 89.4
MS.gene066281.t1 MTR_3g462710 37.901 343 190 6 18 348 1 332 1.38e-65 221
MS.gene066281.t1 MTR_3g462710 43.434 99 56 0 340 438 468 566 2.99e-19 90.9
MS.gene066281.t1 MTR_2g101610 35.015 337 206 6 19 352 15 341 9.70e-65 220
MS.gene066281.t1 MTR_2g101610 28.426 197 122 6 265 454 401 585 5.49e-17 84.0
MS.gene066281.t1 MTR_2g101640 33.923 339 213 6 17 352 9 339 5.79e-64 218
MS.gene066281.t1 MTR_2g101640 41.284 109 62 1 338 446 468 574 2.36e-17 85.1
MS.gene066281.t1 MTR_4g011280 34.916 358 211 8 4 352 2 346 6.33e-64 217
MS.gene066281.t1 MTR_4g011280 36.800 125 72 2 338 456 475 598 4.50e-17 84.3
MS.gene066281.t1 MTR_7g098220 38.438 320 171 5 29 340 28 329 3.76e-62 213
MS.gene066281.t1 MTR_7g098220 35.644 101 65 0 334 434 467 567 7.65e-16 80.5
MS.gene066281.t1 MTR_7g098180 35.714 322 194 3 29 348 29 339 1.76e-61 211
MS.gene066281.t1 MTR_7g098180 24.576 118 86 1 334 451 469 583 5.15e-11 65.5
MS.gene066281.t1 MTR_3g112470 35.103 339 186 7 16 340 4 322 1.14e-60 208
MS.gene066281.t1 MTR_2g101560 34.421 337 208 6 19 352 15 341 6.96e-60 207
MS.gene066281.t1 MTR_2g101560 37.607 117 71 1 338 454 472 586 1.95e-18 88.6
MS.gene066281.t1 MTR_1g041875 36.056 355 209 6 20 367 14 357 1.53e-59 205
MS.gene066281.t1 MTR_7g088820 40.989 283 150 5 72 348 4 275 1.65e-59 204
MS.gene066281.t1 MTR_7g088820 39.474 114 64 3 338 448 410 521 4.31e-15 77.8
MS.gene066281.t1 MTR_3g112460 36.025 322 176 6 29 340 21 322 4.06e-59 204
MS.gene066281.t1 MTR_1g075440 36.047 344 202 6 29 367 26 356 6.27e-59 204
MS.gene066281.t1 MTR_1g075440 37.288 118 74 0 340 457 471 588 8.22e-19 89.7
MS.gene066281.t1 MTR_5g012270 35.277 343 198 8 12 340 2 334 2.62e-58 202
MS.gene066281.t1 MTR_5g012270 40.625 96 55 2 340 435 479 572 7.18e-15 77.4
MS.gene066281.t1 MTR_3g069500 34.906 318 194 4 31 348 35 339 4.89e-57 198
MS.gene066281.t1 MTR_3g069500 37.624 101 62 1 335 435 461 560 4.69e-16 80.9
MS.gene066281.t1 MTR_7g098040 36.223 323 190 6 29 348 32 341 9.50e-57 198
MS.gene066281.t1 MTR_7g098040 33.884 121 80 0 334 454 471 591 2.57e-17 85.1
MS.gene066281.t1 MTR_7g098090 34.985 323 194 5 29 348 31 340 1.08e-56 198
MS.gene066281.t1 MTR_7g098090 31.250 112 75 1 338 449 479 588 4.23e-14 75.1
MS.gene066281.t1 MTR_3g069440 36.478 318 189 4 31 348 33 337 2.27e-56 197
MS.gene066281.t1 MTR_3g069440 39.583 96 57 1 340 435 474 568 3.16e-16 81.6
MS.gene066281.t1 MTR_7g098200 34.494 316 187 5 33 348 31 326 2.58e-56 197
MS.gene066281.t1 MTR_7g098200 30.894 123 80 2 334 453 456 576 6.97e-15 77.4
MS.gene066281.t1 MTR_7g098150 34.985 323 194 6 29 348 31 340 3.31e-56 194
MS.gene066281.t1 MTR_7g006540 37.578 322 191 4 31 348 63 378 5.09e-56 197
MS.gene066281.t1 MTR_7g006540 33.333 120 76 2 320 435 493 612 6.17e-15 77.8
MS.gene066281.t1 MTR_7g098200 33.333 324 190 5 33 348 31 336 5.94e-56 196
MS.gene066281.t1 MTR_7g098200 30.894 123 80 2 334 453 466 586 8.91e-15 77.0
MS.gene066281.t1 MTR_7g098220 37.748 302 162 5 47 340 2 285 8.92e-56 194
MS.gene066281.t1 MTR_7g098220 33.043 115 74 1 334 448 423 534 8.46e-16 80.1
MS.gene066281.t1 MTR_7g098160 34.146 328 190 5 29 348 31 340 1.02e-55 195
MS.gene066281.t1 MTR_7g098160 31.034 116 78 1 334 449 470 583 3.41e-15 78.6
MS.gene066281.t1 MTR_3g112450 36.000 325 186 7 25 340 13 324 2.19e-55 194
MS.gene066281.t1 MTR_1g042310 34.971 346 203 8 29 367 24 354 2.41e-55 194
MS.gene066281.t1 MTR_1g042310 37.143 105 66 0 348 452 477 581 5.35e-17 84.0
MS.gene066281.t1 MTR_1g041835 34.118 340 209 5 31 367 27 354 2.25e-54 191
MS.gene066281.t1 MTR_1g041835 36.364 110 70 0 340 449 469 578 6.13e-17 84.0
MS.gene066281.t1 MTR_1g041815 34.118 340 209 5 31 367 27 354 3.45e-54 191
MS.gene066281.t1 MTR_1g041815 35.294 119 77 0 340 458 469 587 5.16e-18 87.0
MS.gene066281.t1 MTR_1g057460 31.549 355 206 9 12 352 18 349 1.66e-52 186
MS.gene066281.t1 MTR_1g057460 33.684 95 63 0 338 432 470 564 4.59e-12 68.6
MS.gene066281.t1 MTR_3g069420 34.177 316 195 4 33 348 36 338 1.43e-51 184
MS.gene066281.t1 MTR_3g069420 39.583 96 57 1 340 435 475 569 1.00e-15 80.1
MS.gene066281.t1 MTR_7g098230 35.216 301 179 6 43 340 38 325 1.90e-50 181
MS.gene066281.t1 MTR_7g098230 26.724 116 83 1 334 449 463 576 1.03e-12 70.5
MS.gene066281.t1 MTR_1g042310 34.650 329 193 8 46 367 4 317 3.58e-50 179
MS.gene066281.t1 MTR_1g042310 37.143 105 66 0 348 452 440 544 5.54e-17 84.0
MS.gene066281.t1 MTR_4g019580 32.440 336 214 4 33 367 38 361 4.88e-50 179
MS.gene066281.t1 MTR_4g019580 38.542 96 58 1 340 435 475 569 4.56e-14 74.7
MS.gene066281.t1 MTR_1g041885 33.645 321 199 5 50 367 1 310 1.88e-49 177
MS.gene066281.t1 MTR_3g072300 34.985 323 189 9 31 348 24 330 2.43e-49 177
MS.gene066281.t1 MTR_3g072300 35.294 119 77 0 338 456 464 582 2.07e-18 88.6
MS.gene066281.t1 MTR_5g012290 31.429 350 220 6 10 348 1 341 2.94e-49 177
MS.gene066281.t1 MTR_5g012290 33.945 109 69 2 340 448 477 582 2.34e-12 69.3
MS.gene066281.t1 MTR_5g014150 33.851 322 202 6 31 348 44 358 6.98e-49 177
MS.gene066281.t1 MTR_5g014150 38.462 104 61 1 340 443 493 593 2.91e-16 81.6
MS.gene066281.t1 MTR_4g101380 34.483 319 194 5 29 340 25 335 1.58e-47 173
MS.gene066281.t1 MTR_4g101380 40.367 109 62 2 340 448 480 585 6.18e-12 68.2
MS.gene066281.t1 MTR_1g042310 34.154 325 192 8 50 367 1 310 1.64e-47 172
MS.gene066281.t1 MTR_1g042310 37.143 105 66 0 348 452 433 537 5.41e-17 84.0
MS.gene066281.t1 MTR_7g065080 33.851 322 190 6 33 348 33 337 5.65e-47 171
MS.gene066281.t1 MTR_7g065080 36.441 118 70 2 340 457 464 576 3.49e-17 84.7
MS.gene066281.t1 MTR_7g005930 30.061 326 220 3 23 348 27 344 2.96e-45 166
MS.gene066281.t1 MTR_7g005930 41.176 102 58 1 340 441 474 573 2.21e-16 82.0
MS.gene066281.t1 MTR_3g014790 32.927 328 192 4 25 348 11 314 3.06e-45 166
MS.gene066281.t1 MTR_3g014790 35.294 102 65 1 334 435 447 547 1.88e-12 69.7
MS.gene066281.t1 MTR_0236s0050 33.333 297 176 7 59 352 1 278 4.53e-45 164
MS.gene066281.t1 MTR_0236s0050 33.000 100 67 0 333 432 394 493 4.23e-12 68.6
MS.gene066281.t1 MTR_4g033315 32.923 325 179 8 29 348 29 319 5.56e-45 165
MS.gene066281.t1 MTR_4g033315 33.871 124 76 3 321 438 433 556 1.29e-15 79.7
MS.gene066281.t1 MTR_4g033310 32.923 325 179 8 29 348 29 319 5.56e-45 165
MS.gene066281.t1 MTR_4g033310 33.871 124 76 3 321 438 433 556 1.29e-15 79.7
MS.gene066281.t1 MTR_4g114340 34.783 322 197 4 29 348 22 332 9.80e-45 165
MS.gene066281.t1 MTR_4g114340 38.053 113 61 1 340 443 464 576 2.88e-14 75.5
MS.gene066281.t1 MTR_4g033395 32.615 325 181 6 29 348 30 321 1.29e-44 163
MS.gene066281.t1 MTR_4g033325 34.154 325 173 8 29 348 29 317 1.36e-44 164
MS.gene066281.t1 MTR_4g033325 38.144 97 60 0 338 434 452 548 2.03e-16 82.0
MS.gene066281.t1 MTR_7g088820 39.496 238 127 5 117 348 1 227 1.60e-44 162
MS.gene066281.t1 MTR_7g088820 39.474 114 64 3 338 448 362 473 4.14e-15 77.8
MS.gene066281.t1 MTR_5g085850 31.988 322 209 2 31 352 30 341 1.18e-43 162
MS.gene066281.t1 MTR_5g085850 46.875 96 47 1 340 435 465 556 3.00e-21 97.1
MS.gene066281.t1 MTR_1g057460 32.226 301 174 8 59 352 1 278 1.89e-43 160
MS.gene066281.t1 MTR_1g057460 32.000 100 68 0 333 432 394 493 5.71e-12 68.2
MS.gene066281.t1 MTR_3g100980 31.847 314 201 4 29 340 14 316 1.75e-42 158
MS.gene066281.t1 MTR_4g033375 32.615 325 181 7 29 348 30 321 1.80e-42 157
MS.gene066281.t1 MTR_4g033330 34.056 323 174 8 31 348 31 319 2.86e-42 157
MS.gene066281.t1 MTR_4g033330 30.070 143 89 4 279 417 398 533 4.23e-13 71.6
MS.gene066281.t1 MTR_8g087810 30.769 325 218 5 31 351 21 342 3.37e-42 158
MS.gene066281.t1 MTR_7g010820 29.787 329 220 4 25 348 16 338 4.81e-41 155
MS.gene066281.t1 MTR_7g010820 39.583 96 57 1 340 434 475 570 4.21e-11 65.5
MS.gene066281.t1 MTR_8g038880 34.682 346 192 7 10 348 1 319 5.61e-41 154
MS.gene066281.t1 MTR_8g038880 31.193 109 73 2 335 443 451 557 2.90e-13 72.4
MS.gene066281.t1 MTR_4g098800 30.915 317 214 3 33 348 38 350 6.37e-41 154
MS.gene066281.t1 MTR_4g098800 37.234 94 59 0 340 433 480 573 2.13e-14 75.9
MS.gene066281.t1 MTR_4g098800 30.915 317 214 3 33 348 103 415 1.16e-40 154
MS.gene066281.t1 MTR_4g098800 37.234 94 59 0 340 433 545 638 2.59e-14 75.9
MS.gene066281.t1 MTR_2g093640 30.178 338 222 5 19 352 9 336 1.17e-40 153
MS.gene066281.t1 MTR_2g093640 28.902 173 107 3 263 435 391 547 1.16e-13 73.6
MS.gene066281.t1 MTR_3g005010 31.661 319 176 5 33 348 32 311 4.58e-40 151
MS.gene066281.t1 MTR_3g005010 35.593 118 72 2 322 435 426 543 6.61e-16 80.5
MS.gene066281.t1 MTR_0294s0020 33.437 323 178 8 29 348 29 317 6.24e-40 151
MS.gene066281.t1 MTR_0294s0020 33.333 120 76 2 319 434 429 548 4.32e-16 81.3
MS.gene066281.t1 MTR_2g017750 30.675 326 218 5 31 351 34 356 1.10e-39 151
MS.gene066281.t1 MTR_2g017750 34.343 99 64 1 338 435 490 588 3.92e-12 68.9
MS.gene066281.t1 MTR_2g093160 28.358 335 231 4 19 352 9 335 1.13e-39 150
MS.gene066281.t1 MTR_2g093160 33.673 98 59 1 338 435 456 547 2.96e-11 65.9
MS.gene066281.t1 MTR_2g093180 29.586 338 225 6 19 352 9 337 6.89e-39 148
MS.gene066281.t1 MTR_2g093180 33.673 98 59 1 338 435 457 548 1.38e-11 67.0
MS.gene066281.t1 MTR_1g116930 30.149 335 211 9 21 348 14 332 3.97e-38 146
MS.gene066281.t1 MTR_1g116930 37.615 109 63 2 340 446 462 567 5.10e-16 80.9
MS.gene066281.t1 MTR_2g005130 29.154 319 206 5 33 351 42 340 3.92e-37 144
MS.gene066281.t1 MTR_2g005130 34.646 127 73 3 338 462 464 582 4.21e-13 72.0
MS.gene066281.t1 MTR_8g087780 29.909 331 212 7 31 351 21 341 4.10e-37 144
MS.gene066281.t1 MTR_3g100980 29.240 342 201 5 29 340 14 344 4.39e-37 144
MS.gene066281.t1 MTR_7g013270 30.887 327 204 7 30 348 89 401 1.59e-36 142
MS.gene066281.t1 MTR_7g013270 38.739 111 64 1 340 446 531 641 8.30e-19 89.7
MS.gene066281.t1 MTR_3g462710 38.140 215 125 4 136 348 15 223 2.02e-36 140
MS.gene066281.t1 MTR_3g462710 43.434 99 56 0 340 438 359 457 1.35e-19 91.7
MS.gene066281.t1 MTR_1g009170 39.785 186 93 7 162 339 10 184 9.14e-34 131
MS.gene066281.t1 MTR_7g065080 33.459 266 154 6 89 348 2 250 6.56e-33 130
MS.gene066281.t1 MTR_7g065080 36.441 118 70 2 340 457 377 489 2.61e-17 84.7
MS.gene066281.t1 MTR_1g085090 28.344 314 204 6 29 340 17 311 3.96e-32 129
MS.gene066281.t1 MTR_1g085090 32.308 130 82 3 338 464 446 572 2.89e-13 72.4
MS.gene066281.t1 MTR_7g098200 31.250 240 139 5 117 348 1 222 2.77e-31 126
MS.gene066281.t1 MTR_7g098200 30.894 123 80 2 334 453 352 472 5.71e-15 77.4
MS.gene066281.t1 MTR_4g107670 30.508 236 159 2 33 268 26 256 6.76e-31 125
MS.gene066281.t1 MTR_4g107670 34.343 99 64 1 340 437 475 573 2.18e-12 69.7
MS.gene066281.t1 MTR_4g123537 26.912 353 234 6 11 362 21 350 1.37e-30 125
MS.gene066281.t1 MTR_7g111260 28.267 329 210 9 29 356 17 320 1.25e-29 122
MS.gene066281.t1 MTR_7g111260 32.283 127 74 3 338 452 446 572 6.31e-13 71.2
MS.gene066281.t1 MTR_4g033310 37.079 178 96 3 29 206 29 190 1.27e-28 118
MS.gene066281.t1 MTR_4g033310 33.871 124 76 3 321 438 369 492 9.50e-16 79.7
MS.gene066281.t1 MTR_8g469310 31.092 238 160 1 31 268 26 259 3.25e-28 118
MS.gene066281.t1 MTR_8g469310 39.394 99 59 1 340 437 475 573 5.90e-15 77.8
MS.gene066281.t1 MTR_5g038380 29.832 238 163 1 31 268 28 261 2.32e-27 115
MS.gene066281.t1 MTR_5g038380 38.462 104 63 1 340 442 478 581 3.04e-17 84.7
MS.gene066281.t1 MTR_4g033325 32.773 238 119 8 116 348 18 219 9.14e-24 103
MS.gene066281.t1 MTR_4g033325 38.144 97 60 0 338 434 354 450 1.51e-16 82.0
MS.gene066281.t1 MTR_4g033325 33.178 214 114 7 140 348 4 193 1.80e-22 99.8
MS.gene066281.t1 MTR_4g033325 38.144 97 60 0 338 434 328 424 1.47e-16 82.0
MS.gene066281.t1 MTR_4g033385 31.513 238 125 6 116 348 16 220 3.69e-22 99.4
MS.gene066281.t1 MTR_4g033385 28.750 160 103 4 279 434 299 451 3.68e-15 77.8
MS.gene066281.t1 MTR_7g064160 43.529 85 48 0 31 115 29 113 3.76e-22 92.0
MS.gene066281.t1 MTR_7g051880 26.100 341 210 7 16 351 6 309 5.48e-22 99.0
MS.gene066281.t1 MTR_7g051830 26.300 327 205 5 25 351 19 309 1.67e-21 97.8
MS.gene066281.t1 MTR_7g052600 25.994 327 206 5 25 351 19 309 7.24e-21 95.9
MS.gene066281.t1 MTR_6g008690 29.528 254 146 4 48 283 24 262 2.52e-18 87.8
MS.gene066281.t1 MTR_6g008690 22.703 185 111 2 255 439 388 540 1.15e-13 73.6
MS.gene066281.t1 MTR_7g098210 24.834 302 148 9 50 348 1 226 4.74e-17 83.6
MS.gene066281.t1 MTR_7g098210 30.476 105 73 0 334 438 341 445 2.80e-13 72.0
MS.gene066281.t1 MTR_4g024930 29.448 163 109 2 271 433 397 553 4.39e-16 81.3
MS.gene066281.t1 MTR_4g024930 24.658 292 202 8 31 321 36 310 5.44e-14 74.7
MS.gene066281.t1 MTR_4g033390 33.333 99 60 1 350 448 30 122 7.89e-14 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066281.t1 AT1G69870 57.971 345 142 2 29 373 49 390 4.18e-139 413
MS.gene066281.t1 AT1G69870 59.322 118 43 1 340 452 499 616 3.48e-36 141
MS.gene066281.t1 AT1G27080 54.688 320 141 3 29 348 12 327 1.26e-117 357
MS.gene066281.t1 AT1G27080 64.078 103 37 0 340 442 453 555 3.99e-38 146
MS.gene066281.t1 AT1G27080 54.325 289 128 3 60 348 1 285 1.06e-102 317
MS.gene066281.t1 AT1G27080 64.078 103 37 0 340 442 411 513 2.71e-38 146
MS.gene066281.t1 AT1G69860 49.032 310 147 4 29 337 16 315 7.95e-102 315
MS.gene066281.t1 AT1G69860 45.833 96 51 1 340 435 455 549 8.05e-22 99.0
MS.gene066281.t1 AT5G62680 43.354 316 173 3 34 348 46 356 6.13e-88 281
MS.gene066281.t1 AT5G62680 44.860 107 59 0 333 439 490 596 1.68e-24 107
MS.gene066281.t1 AT1G18880 44.375 320 162 5 34 348 22 330 1.22e-87 279
MS.gene066281.t1 AT1G18880 44.954 109 59 1 338 446 469 576 4.85e-24 105
MS.gene066281.t1 AT1G52190 39.589 341 191 6 14 348 4 335 8.17e-80 259
MS.gene066281.t1 AT1G52190 33.673 98 65 0 335 432 469 566 4.30e-14 75.1
MS.gene066281.t1 AT5G28470 42.188 320 177 3 21 339 7 319 4.73e-79 256
MS.gene066281.t1 AT5G28470 26.866 201 109 6 233 432 388 551 1.03e-15 80.1
MS.gene066281.t1 AT5G28470 42.188 320 177 3 21 339 7 319 5.07e-79 256
MS.gene066281.t1 AT5G28470 34.000 100 64 2 334 432 455 553 2.90e-15 78.6
MS.gene066281.t1 AT3G16180 39.359 343 190 7 14 348 4 336 1.89e-77 253
MS.gene066281.t1 AT3G16180 36.190 105 64 2 335 439 469 570 2.57e-13 72.4
MS.gene066281.t1 AT3G47960 43.354 316 171 4 34 348 64 372 1.30e-76 252
MS.gene066281.t1 AT3G47960 39.252 107 65 0 333 439 506 612 3.89e-22 100
MS.gene066281.t1 AT1G68570 39.521 334 187 4 19 347 11 334 5.92e-71 236
MS.gene066281.t1 AT1G68570 42.222 135 72 2 307 435 434 568 2.84e-20 94.4
MS.gene066281.t1 AT1G62200 39.216 357 190 6 2 356 35 366 5.19e-69 231
MS.gene066281.t1 AT1G62200 32.673 101 68 0 338 438 490 590 7.87e-13 70.9
MS.gene066281.t1 AT2G02040 37.360 356 193 6 3 356 25 352 6.82e-69 230
MS.gene066281.t1 AT2G02040 40.594 101 60 0 335 435 481 581 1.20e-18 89.4
MS.gene066281.t1 AT3G54140 40.950 337 175 8 18 348 15 333 2.52e-67 226
MS.gene066281.t1 AT3G54140 48.485 99 51 0 340 438 468 566 8.02e-24 105
MS.gene066281.t1 AT3G54140 40.950 337 175 8 18 348 15 333 2.52e-67 226
MS.gene066281.t1 AT3G54140 48.485 99 51 0 340 438 468 566 8.02e-24 105
MS.gene066281.t1 AT1G62200 37.337 383 190 6 2 356 35 395 3.41e-66 224
MS.gene066281.t1 AT1G62200 32.673 101 68 0 338 438 519 619 7.35e-13 71.2
MS.gene066281.t1 AT1G62200 37.337 383 190 6 2 356 49 409 5.29e-66 223
MS.gene066281.t1 AT1G62200 32.673 101 68 0 338 438 533 633 8.08e-13 71.2
MS.gene066281.t1 AT1G68570 39.677 310 172 4 43 347 5 304 1.24e-64 218
MS.gene066281.t1 AT1G68570 42.222 135 72 2 307 435 404 538 3.45e-20 94.0
MS.gene066281.t1 AT5G01180 36.890 328 193 6 24 348 17 333 2.69e-63 215
MS.gene066281.t1 AT5G01180 45.833 96 52 0 340 435 468 563 2.29e-21 97.4
MS.gene066281.t1 AT5G01180 36.890 328 193 6 24 348 17 333 2.69e-63 215
MS.gene066281.t1 AT5G01180 45.833 96 52 0 340 435 468 563 2.29e-21 97.4
MS.gene066281.t1 AT5G01180 36.890 328 193 6 24 348 17 333 2.69e-63 215
MS.gene066281.t1 AT5G01180 45.833 96 52 0 340 435 468 563 2.29e-21 97.4
MS.gene066281.t1 AT2G02020 37.785 307 174 4 1 296 1 301 1.40e-59 204
MS.gene066281.t1 AT2G02020 38.298 94 54 2 342 434 431 521 2.79e-12 69.3
MS.gene066281.t1 AT2G02020 37.966 295 167 3 1 284 1 290 1.58e-59 204
MS.gene066281.t1 AT2G02020 38.298 94 54 2 342 434 452 542 2.49e-12 69.3
MS.gene066281.t1 AT5G46040 34.030 335 202 6 20 348 12 333 3.17e-57 199
MS.gene066281.t1 AT5G13400 37.888 322 190 4 31 348 64 379 7.69e-57 199
MS.gene066281.t1 AT5G13400 34.906 106 69 0 338 443 514 619 3.24e-15 78.6
MS.gene066281.t1 AT5G46050 32.162 370 231 7 1 367 1 353 3.72e-55 193
MS.gene066281.t1 AT3G45650 34.234 333 194 5 19 348 10 320 4.97e-55 192
MS.gene066281.t1 AT3G45650 35.780 109 64 1 335 443 449 551 5.27e-12 68.6
MS.gene066281.t1 AT3G45650 34.234 333 194 5 19 348 10 320 9.02e-55 192
MS.gene066281.t1 AT3G45650 29.000 200 107 7 255 443 402 577 6.87e-12 68.2
MS.gene066281.t1 AT3G45660 33.746 323 189 5 29 348 19 319 4.02e-53 187
MS.gene066281.t1 AT3G45660 35.644 101 59 1 335 435 448 542 8.26e-11 64.7
MS.gene066281.t1 AT3G45660 33.746 323 189 5 29 348 19 319 4.02e-53 187
MS.gene066281.t1 AT3G45660 35.644 101 59 1 335 435 448 542 8.26e-11 64.7
MS.gene066281.t1 AT3G45660 33.746 323 189 5 29 348 40 340 8.36e-53 187
MS.gene066281.t1 AT3G45690 31.481 324 205 4 17 340 4 310 1.75e-51 182
MS.gene066281.t1 AT3G54450 33.742 326 186 5 29 348 10 311 4.13e-50 179
MS.gene066281.t1 AT3G54450 34.234 111 69 2 338 448 446 552 5.71e-18 87.0
MS.gene066281.t1 AT2G40460 33.746 323 187 7 31 348 24 324 7.46e-50 179
MS.gene066281.t1 AT2G40460 36.697 109 69 0 334 442 454 562 2.44e-19 91.3
MS.gene066281.t1 AT3G45680 32.716 324 204 5 19 340 8 319 1.34e-49 178
MS.gene066281.t1 AT3G45680 35.088 114 66 2 335 446 448 555 7.90e-12 67.8
MS.gene066281.t1 AT3G45710 32.407 324 207 4 29 351 19 331 4.61e-49 176
MS.gene066281.t1 AT2G37900 34.557 327 189 7 29 348 36 344 4.93e-49 177
MS.gene066281.t1 AT2G37900 36.458 96 61 0 340 435 471 566 1.83e-14 76.3
MS.gene066281.t1 AT2G26690 34.954 329 188 5 29 348 22 333 8.53e-49 176
MS.gene066281.t1 AT2G26690 38.462 104 64 0 340 443 463 566 9.30e-15 77.0
MS.gene066281.t1 AT1G12110 33.538 325 205 4 29 348 25 343 2.09e-48 175
MS.gene066281.t1 AT1G12110 37.624 101 61 2 335 435 471 569 2.27e-11 66.6
MS.gene066281.t1 AT3G53960 32.110 327 210 4 31 355 37 353 1.28e-47 173
MS.gene066281.t1 AT3G53960 27.072 181 96 2 255 435 429 573 1.63e-14 76.3
MS.gene066281.t1 AT3G45700 31.402 328 209 4 25 352 10 321 2.86e-47 171
MS.gene066281.t1 AT3G45700 35.644 101 59 1 335 435 438 532 8.98e-11 64.3
MS.gene066281.t1 AT3G45720 31.847 314 201 5 28 340 16 317 2.36e-45 166
MS.gene066281.t1 AT2G26690 34.603 315 180 5 43 348 3 300 1.64e-44 164
MS.gene066281.t1 AT2G26690 38.462 104 64 0 340 443 430 533 9.24e-15 77.0
MS.gene066281.t1 AT3G21670 31.343 335 213 4 21 348 15 339 4.19e-43 160
MS.gene066281.t1 AT3G21670 39.394 99 56 1 340 438 467 561 2.90e-16 81.6
MS.gene066281.t1 AT1G59740 32.407 324 206 7 31 351 41 354 1.21e-42 159
MS.gene066281.t1 AT1G59740 41.176 102 57 3 338 437 478 578 6.10e-13 71.2
MS.gene066281.t1 AT2G26690 34.098 305 175 5 53 348 1 288 3.33e-41 154
MS.gene066281.t1 AT2G26690 38.462 104 64 0 340 443 418 521 9.51e-15 77.0
MS.gene066281.t1 AT1G22570 31.975 319 169 8 28 315 27 328 5.35e-41 154
MS.gene066281.t1 AT4G21680 31.858 339 211 9 20 348 13 341 2.28e-40 153
MS.gene066281.t1 AT4G21680 41.053 95 56 0 340 434 478 572 5.02e-16 80.9
MS.gene066281.t1 AT1G22550 31.532 333 184 7 28 348 27 327 1.43e-39 150
MS.gene066281.t1 AT1G22550 32.773 119 76 2 321 435 441 559 7.79e-13 70.9
MS.gene066281.t1 AT1G32450 31.056 322 210 6 33 348 39 354 1.67e-39 150
MS.gene066281.t1 AT1G32450 28.497 193 132 3 257 446 409 598 1.90e-16 82.4
MS.gene066281.t1 AT1G72125 36.179 246 143 2 33 274 31 266 2.41e-39 149
MS.gene066281.t1 AT5G19640 30.380 316 210 4 33 348 61 366 3.76e-39 150
MS.gene066281.t1 AT5G19640 26.374 273 161 9 166 433 345 582 3.73e-16 81.6
MS.gene066281.t1 AT1G72120 34.959 246 146 2 33 274 31 266 7.52e-39 148
MS.gene066281.t1 AT5G11570 34.842 221 135 3 34 252 16 229 9.89e-39 147
MS.gene066281.t1 AT5G11570 38.947 95 54 1 338 432 386 476 2.14e-14 75.5
MS.gene066281.t1 AT2G37900 34.173 278 158 7 78 348 6 265 1.09e-38 147
MS.gene066281.t1 AT2G37900 36.458 96 61 0 340 435 392 487 1.43e-14 76.3
MS.gene066281.t1 AT1G22570 31.803 305 160 8 42 315 4 291 2.47e-36 140
MS.gene066281.t1 AT1G33440 29.595 321 213 4 31 351 38 345 5.36e-36 140
MS.gene066281.t1 AT1G33440 34.959 123 75 3 338 455 469 591 2.41e-13 72.8
MS.gene066281.t1 AT1G72140 31.741 293 169 6 33 301 36 321 2.09e-35 138
MS.gene066281.t1 AT1G72140 34.021 97 64 0 338 434 455 551 3.54e-14 75.1
MS.gene066281.t1 AT1G22540 33.333 258 153 3 33 283 32 277 5.58e-35 137
MS.gene066281.t1 AT1G22540 34.454 119 74 2 321 435 434 552 5.82e-17 84.0
MS.gene066281.t1 AT5G46050 33.071 254 154 5 117 367 1 241 5.41e-34 133
MS.gene066281.t1 AT5G46050 35.780 109 65 2 338 442 356 463 8.55e-11 64.3
MS.gene066281.t1 AT1G72130 28.689 366 204 6 33 378 27 355 2.86e-32 129
MS.gene066281.t1 AT1G72130 33.000 100 67 0 338 437 436 535 9.63e-15 77.0
MS.gene066281.t1 AT1G27040 26.761 355 210 6 18 351 5 330 1.51e-30 124
MS.gene066281.t1 AT1G27040 40.000 95 57 0 340 434 462 556 1.30e-16 82.8
MS.gene066281.t1 AT1G27040 26.761 355 210 6 18 351 9 334 1.66e-30 124
MS.gene066281.t1 AT1G27040 40.000 95 57 0 340 434 466 560 1.34e-16 82.8
MS.gene066281.t1 AT1G69850 26.979 341 215 6 31 351 25 351 4.73e-29 120
MS.gene066281.t1 AT1G69850 36.082 97 61 1 342 437 485 581 1.14e-14 76.6
MS.gene066281.t1 AT1G27040 26.625 323 192 5 45 351 9 302 3.64e-27 114
MS.gene066281.t1 AT1G27040 40.000 95 57 0 340 434 434 528 1.40e-16 82.8
MS.gene066281.t1 AT5G62730 28.340 247 155 3 31 273 56 284 7.09e-27 114
MS.gene066281.t1 AT5G62730 37.037 108 63 2 333 435 478 585 5.15e-13 71.6
MS.gene066281.t1 AT5G62730 28.216 241 151 3 37 273 3 225 1.51e-25 109
MS.gene066281.t1 AT5G62730 37.037 108 63 2 333 435 419 526 3.92e-13 72.0
MS.gene066281.t1 AT3G25260 26.744 344 201 8 18 351 3 305 3.97e-24 105
MS.gene066281.t1 AT3G25260 34.737 95 56 1 338 432 427 515 9.18e-12 67.4
MS.gene066281.t1 AT5G14940 27.737 274 167 5 28 285 4 262 7.36e-24 105
MS.gene066281.t1 AT3G25280 25.545 321 202 6 31 351 21 304 4.57e-21 96.3
MS.gene066281.t1 AT3G25280 37.113 97 59 2 337 432 426 521 1.80e-11 66.6
MS.gene066281.t1 AT3G01350 28.058 278 164 6 29 285 5 267 1.72e-20 94.7
MS.gene066281.t1 AT2G38100 26.490 302 176 11 59 351 2 266 3.01e-15 78.6
MS.gene066281.t1 AT1G72130 27.984 243 159 6 142 378 5 237 4.85e-15 77.4
MS.gene066281.t1 AT1G72130 33.000 100 67 0 338 437 318 417 7.27e-15 76.6
MS.gene066281.t1 AT1G72130 27.984 243 159 6 142 378 5 237 4.85e-15 77.4
MS.gene066281.t1 AT1G72130 33.000 100 67 0 338 437 318 417 7.27e-15 76.6
MS.gene066281.t1 AT2G38100 26.087 299 181 11 59 351 18 282 5.44e-15 77.8
MS.gene066281.t1 AT2G38100 26.087 299 181 11 59 351 24 288 5.62e-15 77.8

Find 87 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTCAGTTAGTTGGAAATT+TGG 0.192292 5.3:-26203028 MS.gene066281:CDS
GGATCAATAGTTTCTTTAAT+TGG 0.208574 5.3:-26203111 MS.gene066281:CDS
TCCAATAAAGAACAAAATTA+TGG 0.209184 5.3:+26202973 None:intergenic
TGTGAGGCATTCAACATAAT+TGG 0.213042 5.3:-26201587 MS.gene066281:intron
AAAATGGCTTTCCCAATTAA+TGG 0.219508 5.3:+26202815 None:intergenic
TTAGAATCTTCATACTTCTT+TGG 0.247305 5.3:+26201227 None:intergenic
TGGAGGTAGCTTTGACAAAA+TGG 0.272360 5.3:+26202799 None:intergenic
CAAACTTTGCACCTTTGCTT+GGG 0.281223 5.3:-26204780 MS.gene066281:CDS
TCTTACCAGTAGTGAGAAAA+AGG 0.283854 5.3:+26204705 None:intergenic
ATATGTATAATCTAGGGTTT+TGG 0.290608 5.3:-26202122 MS.gene066281:intron
CAGAGATATCTTACTTGAAT+TGG 0.291723 5.3:+26202771 None:intergenic
CCATCAGCATGTTTCTCATT+TGG 0.294135 5.3:+26202854 None:intergenic
CTTCAAACATTCTAAACATA+TGG 0.325832 5.3:-26204813 MS.gene066281:CDS
TTTCTAAGCATAGGTTCTTC+AGG 0.331904 5.3:-26203202 MS.gene066281:CDS
TATGTCTGACCTAAAATAAA+AGG 0.352737 5.3:+26205332 None:intergenic
ATGGAACAATCGTTAATAAC+TGG 0.352756 5.3:-26202060 MS.gene066281:CDS
ATATTATTTGTCAACCAATC+TGG 0.354470 5.3:+26201419 None:intergenic
TCAAACTTTGCACCTTTGCT+TGG 0.356089 5.3:-26204781 MS.gene066281:CDS
CATCTGTTGTAGGGTCAAAT+TGG 0.372917 5.3:+26203146 None:intergenic
TTATTAACGATTGTTCCATC+TGG 0.399109 5.3:+26202064 None:intergenic
TAATTATGTTAGTAGCATAT+TGG 0.400697 5.3:-26201480 MS.gene066281:CDS
TTTGAGAGGTTAGCAGCATT+TGG 0.400860 5.3:-26204895 MS.gene066281:CDS
TTTATGATCCTCCATTAATT+GGG 0.409170 5.3:-26202826 MS.gene066281:CDS
AAACCTCTGGATGTGGAGTT+AGG 0.410686 5.3:-26201275 MS.gene066281:CDS
TCCTCCTTCAACAATTGAAA+AGG 0.410898 5.3:-26205408 MS.gene066281:CDS
TTTAACAAGAGAATTTCATT+TGG 0.418872 5.3:-26204848 MS.gene066281:CDS
TACTACCTTCTAGCTGGGGT+TGG 0.429660 5.3:-26201371 MS.gene066281:CDS
CCACATCCAGAGGTTTCTCT+TGG 0.444032 5.3:+26201282 None:intergenic
CTACTTGCTGGATGCTGACA+AGG 0.445203 5.3:+26202035 None:intergenic
TTCAAACATTCTAAACATAT+GGG 0.447338 5.3:-26204812 MS.gene066281:CDS
GAACTCCAACCCCAGCTAGA+AGG 0.451057 5.3:+26201366 None:intergenic
GAAAATAACATGCATAAAGT+TGG 0.456885 5.3:+26202995 None:intergenic
GATATCTTACTTGAATTGGT+TGG 0.457419 5.3:+26202775 None:intergenic
ATTTCCAACTAACTGAGTCT+TGG 0.460264 5.3:+26203032 None:intergenic
AAAATGAGTGCAGAAGATAA+TGG 0.471618 5.3:-26205449 MS.gene066281:CDS
AGACCATGTAGCATACCATT+TGG 0.480087 5.3:-26203175 MS.gene066281:CDS
ACATCCAAGACTCAGTTAGT+TGG 0.480364 5.3:-26203036 MS.gene066281:CDS
TGATTCAGTGCTTGTTGTTG+AGG 0.481388 5.3:+26203277 None:intergenic
TTGACAAATAATATCAATGA+TGG 0.487428 5.3:-26201410 MS.gene066281:CDS
AAACTTTGCACCTTTGCTTG+GGG 0.491613 5.3:-26204779 MS.gene066281:CDS
TGTTGAGGTGTGCAAGATGG+AGG 0.492532 5.3:+26203292 None:intergenic
TCAAATTGGTCAACACCAAA+TGG 0.504627 5.3:+26203160 None:intergenic
GCAATGCTTCTCATATGATC+AGG 0.508509 5.3:+26201536 None:intergenic
TCTTACTTGAATTGGTTGGT+TGG 0.510915 5.3:+26202779 None:intergenic
TACTTGAATTGGTTGGTTGG+AGG 0.511862 5.3:+26202782 None:intergenic
AAACATGGCAACAAGAAGCC+TGG 0.513129 5.3:-26205371 MS.gene066281:CDS
TATTAACGATTGTTCCATCT+GGG 0.516749 5.3:+26202065 None:intergenic
GGCATGGCCTTCCATCCTCC+AGG 0.519744 5.3:+26205353 None:intergenic
TGTTGTTGAGGTGTGCAAGA+TGG 0.523961 5.3:+26203289 None:intergenic
GATGTGGAGTTAGGTTCAAA+AGG 0.525087 5.3:-26201266 MS.gene066281:CDS
TTTGACCCTACAACAGATGA+AGG 0.530476 5.3:-26203142 MS.gene066281:CDS
CCAAGAGAAACCTCTGGATG+TGG 0.530670 5.3:-26201282 MS.gene066281:CDS
ACTGCAAACTCATCTCAAGT+TGG 0.533140 5.3:-26203247 MS.gene066281:CDS
GGATAAAGCTGCTCTAGTAA+TGG 0.535483 5.3:-26202101 MS.gene066281:CDS
CCAAATGAGAAACATGCTGA+TGG 0.541793 5.3:-26202854 MS.gene066281:CDS
TGTGTAGGTATCAGAAATGA+AGG 0.542396 5.3:+26204756 None:intergenic
CAAGAAGCCTGGAGGATGGA+AGG 0.542507 5.3:-26205360 MS.gene066281:CDS
TTGAAGGAGGAAAGTCAGAG+AGG 0.542752 5.3:+26205420 None:intergenic
GGACTTATATTTCTAAGCAT+AGG 0.547597 5.3:-26203211 MS.gene066281:CDS
CAGCATCCAGCAAGTAGAAG+AGG 0.547715 5.3:-26202029 MS.gene066281:intron
AAACACATAGCCATCCAGAT+TGG 0.556406 5.3:-26201433 MS.gene066281:CDS
TGGGGTTGGAGTTCTCAACT+TGG 0.561283 5.3:-26201357 MS.gene066281:CDS
ACACCAAATGGTATGCTACA+TGG 0.566997 5.3:+26203172 None:intergenic
AGTCTTGAAGCGACCTGTGT+AGG 0.571482 5.3:+26204741 None:intergenic
TGATATCCAAGAGAAACCTC+TGG 0.572759 5.3:-26201288 MS.gene066281:CDS
TAAAGCTGCTCTAGTAATGG+AGG 0.575084 5.3:-26202098 MS.gene066281:CDS
GTTGAGGTGTGCAAGATGGA+GGG 0.578009 5.3:+26203293 None:intergenic
GAAATGAAGGCCCCAAGCAA+AGG 0.579837 5.3:+26204769 None:intergenic
GCAACAAGAAGCCTGGAGGA+TGG 0.581081 5.3:-26205364 MS.gene066281:CDS
CAAATGAGAAACATGCTGAT+GGG 0.584968 5.3:-26202853 MS.gene066281:CDS
CAAGATGGAGGGTGTAATTG+TGG 0.586360 5.3:+26203304 None:intergenic
GAGGGTGATTTAAACCCAGA+TGG 0.591962 5.3:-26202079 MS.gene066281:CDS
GAACCTAACTCCACATCCAG+AGG 0.593114 5.3:+26201272 None:intergenic
TCTTCAAGATATCGTTACAA+AGG 0.595150 5.3:-26201317 MS.gene066281:CDS
CAGGAAATGAATCGTTTGAG+AGG 0.604848 5.3:-26204909 MS.gene066281:CDS
TTCATTTCTGATACCTACAC+AGG 0.604988 5.3:-26204754 MS.gene066281:CDS
CTGACCTAAAATAAAAGGCA+TGG 0.606104 5.3:+26205337 None:intergenic
CAAATAATATCAATGATGGA+AGG 0.609017 5.3:-26201406 MS.gene066281:CDS
TATTTGTCAACCAATCTGGA+TGG 0.611322 5.3:+26201423 None:intergenic
TATGTGCATGTGAAGCCAGA+AGG 0.611356 5.3:-26202941 MS.gene066281:CDS
ATGGCTTTCCCAATTAATGG+AGG 0.625289 5.3:+26202818 None:intergenic
GTATTATACATCATTTACAG+TGG 0.633719 5.3:-26203089 MS.gene066281:CDS
TCAAACATTCTAAACATATG+GGG 0.640912 5.3:-26204811 MS.gene066281:CDS
AACATTCTAAACATATGGGG+TGG 0.647628 5.3:-26204808 MS.gene066281:CDS
AAAGCTGCTCTAGTAATGGA+GGG 0.659745 5.3:-26202097 MS.gene066281:CDS
TAGCAGTGACATTAACAGCA+TGG 0.663737 5.3:-26203330 MS.gene066281:CDS
CATGGCAACAAGAAGCCTGG+AGG 0.703916 5.3:-26205368 MS.gene066281:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAGATATTTAGAAAAA+TGG + chr5.3:26203286-26203305 None:intergenic 10.0%
!! TATTAAATTATAGAATATCA+AGG - chr5.3:26202549-26202568 MS.gene066281:intron 10.0%
!!! ATAATAACTTAAATATCTTT+TGG + chr5.3:26204492-26204511 None:intergenic 10.0%
!!! ATAATTTTCCTTTATAAAAA+TGG + chr5.3:26204116-26204135 None:intergenic 10.0%
!!! TATCAATGAAATTTTATTTT+TGG - chr5.3:26203063-26203082 MS.gene066281:CDS 10.0%
!!! TATTTTAATTTTTAAGAAGT+TGG + chr5.3:26203162-26203181 None:intergenic 10.0%
!!! TTTTTGTTTATATTTTGTTA+CGG - chr5.3:26201556-26201575 MS.gene066281:CDS 10.0%
!! AAATTCATATGTATAATCTA+GGG - chr5.3:26204541-26204560 MS.gene066281:intron 15.0%
!! AATATAATAATGATTCCAAA+AGG + chr5.3:26204087-26204106 None:intergenic 15.0%
!! ATAATAAATAATTCAGTTAG+TGG - chr5.3:26202798-26202817 MS.gene066281:CDS 15.0%
!! ATGAAATTATTATGTTAAAG+TGG + chr5.3:26202680-26202699 None:intergenic 15.0%
!! TAAATTCATATGTATAATCT+AGG - chr5.3:26204540-26204559 MS.gene066281:intron 15.0%
!! TTTGCGTATTTATTATATTT+AGG + chr5.3:26203005-26203024 None:intergenic 15.0%
!!! ATTTGACATTTATTTAACTT+TGG - chr5.3:26201729-26201748 MS.gene066281:intron 15.0%
!!! TACTTTTTTTTCTTTTTTGA+GGG - chr5.3:26202485-26202504 MS.gene066281:intron 15.0%
!!! TTACTTTTTTTTCTTTTTTG+AGG - chr5.3:26202484-26202503 MS.gene066281:intron 15.0%
!!! TTTAAACAAGATTTCTAAAA+TGG - chr5.3:26202071-26202090 MS.gene066281:CDS 15.0%
!! AATTATAGAATATCAAGGTT+CGG - chr5.3:26202554-26202573 MS.gene066281:intron 20.0%
!! AGAAAAATTACAAAGAATGA+AGG - chr5.3:26204881-26204900 MS.gene066281:CDS 20.0%
!! ATTCAATGAGAAACATTATT+TGG - chr5.3:26201481-26201500 MS.gene066281:CDS 20.0%
!! CATTTCTATTGAAATTGTTA+GGG - chr5.3:26203311-26203330 MS.gene066281:CDS 20.0%
!! TAATTATGTTAGTAGCATAT+TGG - chr5.3:26205189-26205208 MS.gene066281:intron 20.0%
!! TATTTCTTTAACTGTATACA+AGG + chr5.3:26202226-26202245 None:intergenic 20.0%
!! TCATTTCTATTGAAATTGTT+AGG - chr5.3:26203310-26203329 MS.gene066281:CDS 20.0%
!! TCCAATAAAGAACAAAATTA+TGG + chr5.3:26203699-26203718 None:intergenic 20.0%
!! TTCAAACATTCTAAACATAT+GGG - chr5.3:26201857-26201876 MS.gene066281:intron 20.0%
!! TTGACAAATAATATCAATGA+TGG - chr5.3:26205259-26205278 MS.gene066281:intron 20.0%
!! TTTAACAAGAGAATTTCATT+TGG - chr5.3:26201821-26201840 MS.gene066281:intron 20.0%
!!! AAAATTTTCAGATATCAAGA+TGG - chr5.3:26203101-26203120 MS.gene066281:CDS 20.0%
!!! AAATATCTTTTGGCTAAATA+TGG + chr5.3:26204482-26204501 None:intergenic 20.0%
!!! ACTTTTTTTTCTTTTTTGAG+GGG - chr5.3:26202486-26202505 MS.gene066281:intron 20.0%
!!! TCCATAATTTTGTTCTTTAT+TGG - chr5.3:26203695-26203714 MS.gene066281:intron 20.0%
!!! TTTAACTTTGGTAATAATAC+AGG - chr5.3:26201741-26201760 MS.gene066281:intron 20.0%
!!! TTTGTAATTTTTCTTAGTGA+TGG + chr5.3:26204875-26204894 None:intergenic 20.0%
!!! TTTGTTAGCCATTTTTATAA+AGG - chr5.3:26204105-26204124 MS.gene066281:intron 20.0%
!!! TTTTATGTGCAACAAAATAA+AGG + chr5.3:26202869-26202888 None:intergenic 20.0%
! AAAATTACAAAGAATGAAGG+AGG - chr5.3:26204884-26204903 MS.gene066281:CDS 25.0%
! AAGCAATGGTATAAACTATA+TGG + chr5.3:26201684-26201703 None:intergenic 25.0%
! AATAAATGTGAAAGAGACAT+AGG + chr5.3:26202966-26202985 None:intergenic 25.0%
! AATAAGTAAAGATTTCTTGC+GGG + chr5.3:26204046-26204065 None:intergenic 25.0%
! AATAGACTTAAAAACAGTAC+TGG - chr5.3:26202642-26202661 MS.gene066281:intron 25.0%
! AATATGGAAAAAGTCGTATT+TGG + chr5.3:26204466-26204485 None:intergenic 25.0%
! AGCTACAATCATTGATATAA+TGG + chr5.3:26204951-26204970 None:intergenic 25.0%
! ATATTATTTGTCAACCAATC+TGG + chr5.3:26205253-26205272 None:intergenic 25.0%
! ATTATATCAATGATTGTAGC+TGG - chr5.3:26204950-26204969 MS.gene066281:intron 25.0%
! CAATAAGTAAAGATTTCTTG+CGG + chr5.3:26204047-26204066 None:intergenic 25.0%
! CTTCAAACATTCTAAACATA+TGG - chr5.3:26201856-26201875 MS.gene066281:intron 25.0%
! CTTCTTCTGTAACAAAATAT+AGG - chr5.3:26201506-26201525 MS.gene066281:CDS 25.0%
! GAAAATAACATGCATAAAGT+TGG + chr5.3:26203677-26203696 None:intergenic 25.0%
! GAGATTTCTTTATAAAGCAA+TGG + chr5.3:26201698-26201717 None:intergenic 25.0%
! GGATCAATAGTTTCTTTAAT+TGG - chr5.3:26203558-26203577 MS.gene066281:intron 25.0%
! GTATTATACATCATTTACAG+TGG - chr5.3:26203580-26203599 MS.gene066281:intron 25.0%
! TATGTCTGACCTAAAATAAA+AGG + chr5.3:26201340-26201359 None:intergenic 25.0%
! TCAAACATTCTAAACATATG+GGG - chr5.3:26201858-26201877 MS.gene066281:intron 25.0%
! TGCAAGTTTACAAAAATGTT+GGG + chr5.3:26201642-26201661 None:intergenic 25.0%
! TTAGAATCTTCATACTTCTT+TGG + chr5.3:26205445-26205464 None:intergenic 25.0%
! TTTATGATCCTCCATTAATT+GGG - chr5.3:26203843-26203862 MS.gene066281:intron 25.0%
! TTTATTAATATGTGCCCTTA+TGG - chr5.3:26203245-26203264 MS.gene066281:CDS 25.0%
!! CAAATAATATCAATGATGGA+AGG - chr5.3:26205263-26205282 MS.gene066281:intron 25.0%
!! CACAAATTTTAAACAAAACG+AGG - chr5.3:26202775-26202794 MS.gene066281:intron 25.0%
!! CTTGCTGAAATAGTTTATTT+TGG - chr5.3:26201445-26201464 MS.gene066281:CDS 25.0%
!! GTTGTAAGCAAAAAACATTT+TGG + chr5.3:26201385-26201404 None:intergenic 25.0%
!! TATAAACTATATGGAAGTGT+AGG + chr5.3:26201675-26201694 None:intergenic 25.0%
!! TTTACAACTTATTCACCTTT+TGG - chr5.3:26204069-26204088 MS.gene066281:intron 25.0%
!! TTTTATGATCCTCCATTAAT+TGG - chr5.3:26203842-26203861 MS.gene066281:intron 25.0%
!!! ATATGTATAATCTAGGGTTT+TGG - chr5.3:26204547-26204566 MS.gene066281:intron 25.0%
AAAATGGCTTTCCCAATTAA+TGG + chr5.3:26203857-26203876 None:intergenic 30.0%
AATGAGTGTGAGGAAATTAA+AGG - chr5.3:26204260-26204279 MS.gene066281:intron 30.0%
ACAACAGATGAAGGAAAAAA+AGG - chr5.3:26203536-26203555 MS.gene066281:intron 30.0%
ACTTGCATGTAAATCATTCA+CGG - chr5.3:26202513-26202532 MS.gene066281:intron 30.0%
AGAAAATAGCAGAAATAGAG+GGG + chr5.3:26202354-26202373 None:intergenic 30.0%
AGAGAAAATAGCAGAAATAG+AGG + chr5.3:26202356-26202375 None:intergenic 30.0%
AGCAAGAACATTTCCAATTT+GGG - chr5.3:26204673-26204692 MS.gene066281:intron 30.0%
ATAAGTAAAGATTTCTTGCG+GGG + chr5.3:26204045-26204064 None:intergenic 30.0%
ATGGAACAATCGTTAATAAC+TGG - chr5.3:26204609-26204628 MS.gene066281:intron 30.0%
ATTTATCACACTATTGTACG+TGG + chr5.3:26202625-26202644 None:intergenic 30.0%
CAACAGATGAAGGAAAAAAA+GGG - chr5.3:26203537-26203556 MS.gene066281:intron 30.0%
CAGAGATATCTTACTTGAAT+TGG + chr5.3:26203901-26203920 None:intergenic 30.0%
CTCAAGAGTCAATTATCATT+AGG + chr5.3:26202111-26202130 None:intergenic 30.0%
GAACCAAACTATGAAAAACA+TGG - chr5.3:26201283-26201302 MS.gene066281:CDS 30.0%
GAGAAAATAGCAGAAATAGA+GGG + chr5.3:26202355-26202374 None:intergenic 30.0%
GATATCTTACTTGAATTGGT+TGG + chr5.3:26203897-26203916 None:intergenic 30.0%
GTGCAAGTTTACAAAAATGT+TGG + chr5.3:26201643-26201662 None:intergenic 30.0%
TAGCAAGAACATTTCCAATT+TGG - chr5.3:26204672-26204691 MS.gene066281:intron 30.0%
TATTAACGATTGTTCCATCT+GGG + chr5.3:26204607-26204626 None:intergenic 30.0%
TCGATTAATGAGTGTAACTA+TGG - chr5.3:26201594-26201613 MS.gene066281:intron 30.0%
TCTTCAAGATATCGTTACAA+AGG - chr5.3:26205352-26205371 MS.gene066281:CDS 30.0%
TTATTAACGATTGTTCCATC+TGG + chr5.3:26204608-26204627 None:intergenic 30.0%
! ATAATTGACTCTTGAGACTT+AGG - chr5.3:26202115-26202134 MS.gene066281:intron 30.0%
! GGACTTATATTTCTAAGCAT+AGG - chr5.3:26203458-26203477 MS.gene066281:intron 30.0%
! TTGCCATGTTTTTCATAGTT+TGG + chr5.3:26201289-26201308 None:intergenic 30.0%
! TTTTTCCTTCATCTGTTGTA+GGG + chr5.3:26203535-26203554 None:intergenic 30.0%
!! TAGTATTGCACAAGTTTTAG+TGG - chr5.3:26203763-26203782 MS.gene066281:intron 30.0%
!!! CAAGTTGGTTTTCTATTCAT+GGG - chr5.3:26203437-26203456 MS.gene066281:intron 30.0%
!!! TCAAGTTGGTTTTCTATTCA+TGG - chr5.3:26203436-26203455 MS.gene066281:intron 30.0%
!!! TGGTTTGCTAGCTAATTTTA+TGG - chr5.3:26201794-26201813 MS.gene066281:intron 30.0%
!!! TGTTTTTTGCTTACAACATG+TGG - chr5.3:26201388-26201407 MS.gene066281:CDS 30.0%
!!! TTTTTTCCTTCATCTGTTGT+AGG + chr5.3:26203536-26203555 None:intergenic 30.0%
AAAATAGCAGAAATAGAGGG+GGG + chr5.3:26202352-26202371 None:intergenic 35.0%
AAACCCAACAAAACCAATTG+TGG + chr5.3:26205061-26205080 None:intergenic 35.0%
AACATTCTAAACATATGGGG+TGG - chr5.3:26201861-26201880 MS.gene066281:intron 35.0%
AACCCAACAAAACCAATTGT+GGG + chr5.3:26205060-26205079 None:intergenic 35.0%
AATAGCCACATTACTGACAT+AGG + chr5.3:26205037-26205056 None:intergenic 35.0%
AATTCTAATCCAAGTCCACA+AGG - chr5.3:26205004-26205023 MS.gene066281:intron 35.0%
AGAGGGATAGAAAAAGATAG+AGG - chr5.3:26204168-26204187 MS.gene066281:intron 35.0%
ATCAATGATTGTAGCTGGTT+TGG - chr5.3:26204955-26204974 MS.gene066281:intron 35.0%
ATTTCCAACTAACTGAGTCT+TGG + chr5.3:26203640-26203659 None:intergenic 35.0%
CAAATGAGAAACATGCTGAT+GGG - chr5.3:26203816-26203835 MS.gene066281:intron 35.0%
CTAGAAAAAATGCTTCCTTC+TGG + chr5.3:26203746-26203765 None:intergenic 35.0%
CTGACCTAAAATAAAAGGCA+TGG + chr5.3:26201335-26201354 None:intergenic 35.0%
CTTGACCTAGAATGAGTAAT+AGG + chr5.3:26204148-26204167 None:intergenic 35.0%
CTTGCATGTAAATCATTCAC+GGG - chr5.3:26202514-26202533 MS.gene066281:intron 35.0%
GAAAATAGCAGAAATAGAGG+GGG + chr5.3:26202353-26202372 None:intergenic 35.0%
GACATAGCAAATGGCAATAA+TGG + chr5.3:26202600-26202619 None:intergenic 35.0%
GACTCAGTTAGTTGGAAATT+TGG - chr5.3:26203641-26203660 MS.gene066281:intron 35.0%
GAGGGATAGAAAAAGATAGA+GGG - chr5.3:26204169-26204188 MS.gene066281:intron 35.0%
GATGATGTCACGTTAGAAAA+TGG + chr5.3:26202905-26202924 None:intergenic 35.0%
GTTGATCGTCATAGGTTTAT+GGG - chr5.3:26204823-26204842 MS.gene066281:CDS 35.0%
TAAACTGTTGAATGAGTGTG+AGG - chr5.3:26204250-26204269 MS.gene066281:intron 35.0%
TACAACATGTGGTCGAATTT+CGG - chr5.3:26201399-26201418 MS.gene066281:CDS 35.0%
TAGTGTACATAAAAGCTCTG+TGG + chr5.3:26202187-26202206 None:intergenic 35.0%
TATTTGTCAACCAATCTGGA+TGG + chr5.3:26205249-26205268 None:intergenic 35.0%
TCAAATTGGTCAACACCAAA+TGG + chr5.3:26203512-26203531 None:intergenic 35.0%
TCCTCCTTCAACAATTGAAA+AGG - chr5.3:26201261-26201280 MS.gene066281:CDS 35.0%
TCTTACCAGTAGTGAGAAAA+AGG + chr5.3:26201967-26201986 None:intergenic 35.0%
TCTTACTTGAATTGGTTGGT+TGG + chr5.3:26203893-26203912 None:intergenic 35.0%
TGTATCACAAGCCATGAAAA+TGG - chr5.3:26204745-26204764 MS.gene066281:CDS 35.0%
TGTGATAGAAACACAGAGAT+AGG - chr5.3:26204218-26204237 MS.gene066281:intron 35.0%
TGTGTAGGTATCAGAAATGA+AGG + chr5.3:26201916-26201935 None:intergenic 35.0%
TTAGTGATGGTACACATATC+CGG + chr5.3:26204862-26204881 None:intergenic 35.0%
TTCATTTCTGATACCTACAC+AGG - chr5.3:26201915-26201934 MS.gene066281:intron 35.0%
TTTCTAAGCATAGGTTCTTC+AGG - chr5.3:26203467-26203486 MS.gene066281:intron 35.0%
! AAACAGTACTGGAGTTAGAT+TGG - chr5.3:26202653-26202672 MS.gene066281:intron 35.0%
! ATTTTACCTCTTCTACTTGC+TGG + chr5.3:26204649-26204668 None:intergenic 35.0%
! GGTTCCTTTTCAATTGTTGA+AGG + chr5.3:26201268-26201287 None:intergenic 35.0%
! TACTTTTACTACCTTCTAGC+TGG - chr5.3:26205292-26205311 MS.gene066281:intron 35.0%
! TCCTTTTCAATTGTTGAAGG+AGG + chr5.3:26201265-26201284 None:intergenic 35.0%
! TGTGAGGCATTCAACATAAT+TGG - chr5.3:26205082-26205101 MS.gene066281:intron 35.0%
!! ACTTTTACTACCTTCTAGCT+GGG - chr5.3:26205293-26205312 MS.gene066281:intron 35.0%
!! CACATTAACTTGTGCCATAA+GGG + chr5.3:26203262-26203281 None:intergenic 35.0%
!! TCACATTAACTTGTGCCATA+AGG + chr5.3:26203263-26203282 None:intergenic 35.0%
!!! AAGGCCATGCCTTTTATTTT+AGG - chr5.3:26201328-26201347 MS.gene066281:CDS 35.0%
!!! ATTCCCACAATTGGTTTTGT+TGG - chr5.3:26205054-26205073 MS.gene066281:intron 35.0%
!!! TTCCCACAATTGGTTTTGTT+GGG - chr5.3:26205055-26205074 MS.gene066281:intron 35.0%
AAACACATAGCCATCCAGAT+TGG - chr5.3:26205236-26205255 MS.gene066281:intron 40.0%
AAACTTTGCACCTTTGCTTG+GGG - chr5.3:26201890-26201909 MS.gene066281:intron 40.0%
AAATAGCAGAAATAGAGGGG+GGG + chr5.3:26202351-26202370 None:intergenic 40.0%
AATGTGGCTATTCCCACAAT+TGG - chr5.3:26205045-26205064 MS.gene066281:intron 40.0%
ACACCAAATGGTATGCTACA+TGG + chr5.3:26203500-26203519 None:intergenic 40.0%
ACATCCAAGACTCAGTTAGT+TGG - chr5.3:26203633-26203652 MS.gene066281:intron 40.0%
ACTCATTCTAGGTCAAGAGA+GGG - chr5.3:26204151-26204170 MS.gene066281:intron 40.0%
ACTGCAAACTCATCTCAAGT+TGG - chr5.3:26203422-26203441 MS.gene066281:intron 40.0%
AGACCATGTAGCATACCATT+TGG - chr5.3:26203494-26203513 MS.gene066281:intron 40.0%
ATCACTCTCCTCCAAAGAAT+CGG - chr5.3:26204908-26204927 MS.gene066281:CDS 40.0%
ATGGCTTTCCCAATTAATGG+AGG + chr5.3:26203854-26203873 None:intergenic 40.0%
ATGTGGTCGAATTTCGGATT+TGG - chr5.3:26201405-26201424 MS.gene066281:CDS 40.0%
CAAACTTTGCACCTTTGCTT+GGG - chr5.3:26201889-26201908 MS.gene066281:intron 40.0%
CAGGAAATGAATCGTTTGAG+AGG - chr5.3:26201760-26201779 MS.gene066281:intron 40.0%
CATCTGTTGTAGGGTCAAAT+TGG + chr5.3:26203526-26203545 None:intergenic 40.0%
CCAAATGAGAAACATGCTGA+TGG - chr5.3:26203815-26203834 MS.gene066281:intron 40.0%
CCATCAGCATGTTTCTCATT+TGG + chr5.3:26203818-26203837 None:intergenic 40.0%
CGTTGATCGTCATAGGTTTA+TGG - chr5.3:26204822-26204841 MS.gene066281:CDS 40.0%
GATGTGGAGTTAGGTTCAAA+AGG - chr5.3:26205403-26205422 MS.gene066281:CDS 40.0%
GCAATGCTTCTCATATGATC+AGG + chr5.3:26205136-26205155 None:intergenic 40.0%
GGATAAAGCTGCTCTAGTAA+TGG - chr5.3:26204568-26204587 MS.gene066281:intron 40.0%
GTCATATCGTTGATCGTCAT+AGG - chr5.3:26204815-26204834 MS.gene066281:CDS 40.0%
GTGCACCTATTACTCATTCT+AGG - chr5.3:26204140-26204159 MS.gene066281:intron 40.0%
TAAAGCTGCTCTAGTAATGG+AGG - chr5.3:26204571-26204590 MS.gene066281:intron 40.0%
TACTCATTCTAGGTCAAGAG+AGG - chr5.3:26204150-26204169 MS.gene066281:intron 40.0%
TAGCAGTGACATTAACAGCA+TGG - chr5.3:26203339-26203358 MS.gene066281:CDS 40.0%
TCAAACTTTGCACCTTTGCT+TGG - chr5.3:26201888-26201907 MS.gene066281:intron 40.0%
TGATATCCAAGAGAAACCTC+TGG - chr5.3:26205381-26205400 MS.gene066281:CDS 40.0%
TGTGAAAGAGACATAGGAAG+TGG + chr5.3:26202960-26202979 None:intergenic 40.0%
TTGCTCCTATGTCAGTAATG+TGG - chr5.3:26205029-26205048 MS.gene066281:intron 40.0%
TTTGACCCTACAACAGATGA+AGG - chr5.3:26203527-26203546 MS.gene066281:intron 40.0%
TTTGAGAGGTTAGCAGCATT+TGG - chr5.3:26201774-26201793 MS.gene066281:intron 40.0%
! AAAGCTGCTCTAGTAATGGA+GGG - chr5.3:26204572-26204591 MS.gene066281:intron 40.0%
! GTTCTCTTGCTCTTTTGCTT+TGG - chr5.3:26205165-26205184 MS.gene066281:intron 40.0%
! TACTTGAATTGGTTGGTTGG+AGG + chr5.3:26203890-26203909 None:intergenic 40.0%
! TGCTTCCTTTTTCTCACTAC+TGG - chr5.3:26201959-26201978 MS.gene066281:intron 40.0%
!! CTTTTACTACCTTCTAGCTG+GGG - chr5.3:26205294-26205313 MS.gene066281:intron 40.0%
!! TGATTCAGTGCTTGTTGTTG+AGG + chr5.3:26203395-26203414 None:intergenic 40.0%
!! TGGAGGTAGCTTTGACAAAA+TGG + chr5.3:26203873-26203892 None:intergenic 40.0%
!!! GGTTTTGTTGGGTTTTTGTG+AGG - chr5.3:26205066-26205085 MS.gene066281:intron 40.0%
AAACATGGCAACAAGAAGCC+TGG - chr5.3:26201298-26201317 MS.gene066281:CDS 45.0%
AAACCTCTGGATGTGGAGTT+AGG - chr5.3:26205394-26205413 MS.gene066281:CDS 45.0%
AATAGCAGAAATAGAGGGGG+GGG + chr5.3:26202350-26202369 None:intergenic 45.0%
ACACATATCCGGTCGTAGAA+TGG + chr5.3:26204851-26204870 None:intergenic 45.0%
ACATTTCCAATTTGGGCAGC+CGG - chr5.3:26204680-26204699 MS.gene066281:intron 45.0%
ATGAAAATGGACCGACACCT+CGG - chr5.3:26204758-26204777 MS.gene066281:CDS 45.0%
CACATATCCGGTCGTAGAAT+GGG + chr5.3:26204850-26204869 None:intergenic 45.0%
CCAAAATTCCAAATCCCAGC+CGG - chr5.3:26204782-26204801 MS.gene066281:CDS 45.0%
CCAAAGAATCGGAATTGGCA+TGG - chr5.3:26204919-26204938 MS.gene066281:intron 45.0%
CCATGCCAATTCCGATTCTT+TGG + chr5.3:26204922-26204941 None:intergenic 45.0%
CTCCTCCAAAGAATCGGAAT+TGG - chr5.3:26204914-26204933 MS.gene066281:intron 45.0%
GACATAGGAGCAATTCCTTG+TGG + chr5.3:26205022-26205041 None:intergenic 45.0%
GAGGGTGATTTAAACCCAGA+TGG - chr5.3:26204590-26204609 MS.gene066281:intron 45.0%
TACGTGGACGACATAGCAAA+TGG + chr5.3:26202609-26202628 None:intergenic 45.0%
TATGTGCATGTGAAGCCAGA+AGG - chr5.3:26203728-26203747 MS.gene066281:intron 45.0%
TGCCAATTCCGATTCTTTGG+AGG + chr5.3:26204919-26204938 None:intergenic 45.0%
TGTTGTTGAGGTGTGCAAGA+TGG + chr5.3:26203383-26203402 None:intergenic 45.0%
TTGAAGGAGGAAAGTCAGAG+AGG + chr5.3:26201252-26201271 None:intergenic 45.0%
! CAAGATGGAGGGTGTAATTG+TGG + chr5.3:26203368-26203387 None:intergenic 45.0%
!! CTTGCGGGGTTAGTTATTGT+TGG + chr5.3:26204031-26204050 None:intergenic 45.0%
!! GGATTTGGAATTTTGGTCCG+AGG + chr5.3:26204778-26204797 None:intergenic 45.0%
!! TTATGTTTATTTATTATATA+TGG - chr5.3:26203943-26203962 MS.gene066281:intron 5.0%
!!! ATTTTTAATTTTTTTTTTGA+GGG + chr5.3:26203190-26203209 None:intergenic 5.0%
!!! TATTTTTAATTTTTTTTTTG+AGG + chr5.3:26203191-26203210 None:intergenic 5.0%
AGTCTTGAAGCGACCTGTGT+AGG + chr5.3:26201931-26201950 None:intergenic 50.0%
ATAGCAGAAATAGAGGGGGG+GGG + chr5.3:26202349-26202368 None:intergenic 50.0%
CAGCATCCAGCAAGTAGAAG+AGG - chr5.3:26204640-26204659 MS.gene066281:intron 50.0%
CCAAGAGAAACCTCTGGATG+TGG - chr5.3:26205387-26205406 MS.gene066281:CDS 50.0%
CCACATCCAGAGGTTTCTCT+TGG + chr5.3:26205390-26205409 None:intergenic 50.0%
CGATATGACTCCGAGTGAAC+CGG + chr5.3:26204804-26204823 None:intergenic 50.0%
GAAATGAAGGCCCCAAGCAA+AGG + chr5.3:26201903-26201922 None:intergenic 50.0%
GAACCTAACTCCACATCCAG+AGG + chr5.3:26205400-26205419 None:intergenic 50.0%
GGAGCAATTCCTTGTGGACT+TGG + chr5.3:26205016-26205035 None:intergenic 50.0%
GTTGAGGTGTGCAAGATGGA+GGG + chr5.3:26203379-26203398 None:intergenic 50.0%
TATCCTAGGTTTCACCGCGA+TGG - chr5.3:26204703-26204722 MS.gene066281:intron 50.0%
TATGGGTCCCATTCTACGAC+CGG - chr5.3:26204840-26204859 MS.gene066281:CDS 50.0%
TGGGGTTGGAGTTCTCAACT+TGG - chr5.3:26205312-26205331 MS.gene066281:intron 50.0%
TGTTGAGGTGTGCAAGATGG+AGG + chr5.3:26203380-26203399 None:intergenic 50.0%
! CTACTTGCTGGATGCTGACA+AGG + chr5.3:26204637-26204656 None:intergenic 50.0%
! TACTACCTTCTAGCTGGGGT+TGG - chr5.3:26205298-26205317 MS.gene066281:intron 50.0%
!! CCGGCTGGGATTTGGAATTT+TGG + chr5.3:26204785-26204804 None:intergenic 50.0%
!! GCGGGGTTAGTTATTGTTGG+TGG + chr5.3:26204028-26204047 None:intergenic 50.0%
!! GGAATTTTGGTCCGAGGTGT+CGG + chr5.3:26204772-26204791 None:intergenic 50.0%
!!! GAGGTGTCGGTCCATTTTCA+TGG + chr5.3:26204759-26204778 None:intergenic 50.0%
ATTTGGGCAGCCGGTATCCT+AGG - chr5.3:26204689-26204708 MS.gene066281:intron 55.0%
CAAGAAGCCTGGAGGATGGA+AGG - chr5.3:26201309-26201328 MS.gene066281:CDS 55.0%
CATGGCAACAAGAAGCCTGG+AGG - chr5.3:26201301-26201320 MS.gene066281:CDS 55.0%
CGCGGTGAAACCTAGGATAC+CGG + chr5.3:26204702-26204721 None:intergenic 55.0%
GAACTCCAACCCCAGCTAGA+AGG + chr5.3:26205306-26205325 None:intergenic 55.0%
GCAACAAGAAGCCTGGAGGA+TGG - chr5.3:26201305-26201324 MS.gene066281:CDS 55.0%
TAGCAGAAATAGAGGGGGGG+GGG + chr5.3:26202348-26202367 None:intergenic 55.0%
TGTTCCTTGTTGCGCCATCG+CGG + chr5.3:26204720-26204739 None:intergenic 55.0%
! AGGATACCGGCTGCCCAAAT+TGG + chr5.3:26204689-26204708 None:intergenic 55.0%
! CAAATCCCAGCCGGTTCACT+CGG - chr5.3:26204791-26204810 MS.gene066281:CDS 55.0%
AGCAGAAATAGAGGGGGGGG+GGG + chr5.3:26202347-26202366 None:intergenic 60.0%
ATGACTCCGAGTGAACCGGC+TGG + chr5.3:26204800-26204819 None:intergenic 60.0%
CGAGTGAACCGGCTGGGATT+TGG + chr5.3:26204793-26204812 None:intergenic 60.0%
TGACTCCGAGTGAACCGGCT+GGG + chr5.3:26204799-26204818 None:intergenic 60.0%
TTCACCGCGATGGCGCAACA+AGG - chr5.3:26204713-26204732 MS.gene066281:CDS 60.0%
AGAAATAGAGGGGGGGGGGG+GGG + chr5.3:26202344-26202363 None:intergenic 65.0%
CAGAAATAGAGGGGGGGGGG+GGG + chr5.3:26202345-26202364 None:intergenic 65.0%
GCAGAAATAGAGGGGGGGGG+GGG + chr5.3:26202346-26202365 None:intergenic 65.0%
GCGCCATCGCGGTGAAACCT+AGG + chr5.3:26204709-26204728 None:intergenic 65.0%
GGCATGGCCTTCCATCCTCC+AGG + chr5.3:26201319-26201338 None:intergenic 65.0%
AAATAGAGGGGGGGGGGGGG+GGG + chr5.3:26202342-26202361 None:intergenic 70.0%
GAAATAGAGGGGGGGGGGGG+GGG + chr5.3:26202343-26202362 None:intergenic 70.0%
AATAGAGGGGGGGGGGGGGG+GGG + chr5.3:26202341-26202360 None:intergenic 75.0%
! ATAGAGGGGGGGGGGGGGGG+GGG + chr5.3:26202340-26202359 None:intergenic 80.0%
! TAGAGGGGGGGGGGGGGGGG+GGG + chr5.3:26202339-26202358 None:intergenic 85.0%
! AGAGGGGGGGGGGGGGGGGG+GGG + chr5.3:26202338-26202357 None:intergenic 90.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 26201223 26205468 26201223 ID=MS.gene066281
chr5.3 mRNA 26201223 26205468 26201223 ID=MS.gene066281.t1;Parent=MS.gene066281
chr5.3 exon 26205342 26205468 26205342 ID=MS.gene066281.t1.exon1;Parent=MS.gene066281.t1
chr5.3 CDS 26205342 26205468 26205342 ID=cds.MS.gene066281.t1;Parent=MS.gene066281.t1
chr5.3 exon 26204711 26204928 26204711 ID=MS.gene066281.t1.exon2;Parent=MS.gene066281.t1
chr5.3 CDS 26204711 26204928 26204711 ID=cds.MS.gene066281.t1;Parent=MS.gene066281.t1
chr5.3 exon 26202785 26203359 26202785 ID=MS.gene066281.t1.exon3;Parent=MS.gene066281.t1
chr5.3 CDS 26202785 26203359 26202785 ID=cds.MS.gene066281.t1;Parent=MS.gene066281.t1
chr5.3 exon 26202030 26202129 26202030 ID=MS.gene066281.t1.exon4;Parent=MS.gene066281.t1
chr5.3 CDS 26202030 26202129 26202030 ID=cds.MS.gene066281.t1;Parent=MS.gene066281.t1
chr5.3 exon 26201223 26201603 26201223 ID=MS.gene066281.t1.exon5;Parent=MS.gene066281.t1
chr5.3 CDS 26201223 26201603 26201223 ID=cds.MS.gene066281.t1;Parent=MS.gene066281.t1
Gene Sequence

>MS.gene066281

ATGAGTGCAGAAGATAATGGAACAAACCTCTCTGACTTTCCTCCTTCAACAATTGAAAAGGAACCAAACTATGAAAAACATGGCAACAAGAAGCCTGGAGGATGGAAGGCCATGCCTTTTATTTTAGGTCAGACATAAATATATATATATTCATCTTTTCCAAAATGTTTTTTGCTTACAACATGTGGTCGAATTTCGGATTTGGATTACATGTTGTAATTTCTTGCTGAAATAGTTTATTTTGGTTGTTCGATCTCAATTCAATGAGAAACATTATTTGGTACTTCTTCTGTAACAAAATATAGGCAATAAAATTACATGTATATCATGTATTTTTTGTTTATATTTTGTTACGGAGTAAATGATTCAGATCGATTAATGAGTGTAACTATGGACTATGTTTAAAGCTATTTTTTCCCAACATTTTTGTAAACTTGCACAAAATATATCCTACACTTCCATATAGTTTATACCATTGCTTTATAAAGAAATCTCAATATCAAATAATTTGACATTTATTTAACTTTGGTAATAATACAGGAAATGAATCGTTTGAGAGGTTAGCAGCATTTGGTTTGCTAGCTAATTTTATGGTGTATTTAACAAGAGAATTTCATTTGGAGCAAGTTCATGCTTCAAACATTCTAAACATATGGGGTGGTATTTCAAACTTTGCACCTTTGCTTGGGGCCTTCATTTCTGATACCTACACAGGTCGCTTCAAGACTATAGCTTTTGCTTCCTTTTTCTCACTACTGGTAAGAATTTATTTTAAGATTTTTTTTTTGACAAAATTTTATTTTAAGATTTAATTCTTATATACTATCAAATAATGAAAAATATCTTACTTTAAACAAGATTTCTAAAATGGCTCTTTGTTTTTGACCTAATGATAATTGACTCTTGAGACTTAGGAAGATATAAAGATACATATAGTTGTCATTTCTTAGTACTGAAGAAGCCACAGAGCTTTTATGTACACTATTATTTACTCGAAATACCTTGTATACAGTTAAAGAAATATTTATAATTAGTTATACTAAACTAATATAAAATATTACTGTTTCTGAATTAAATAGTTTTTGTTAAAATCACATTAAATAGTTTTTATTCCCCCCCCCCCCCCCCCCCCTCTATTTCTGCTATTTTCTCTTTCTCAATCAATAAAAAAAATTACATTGATATCAATAGTTTTTATTCTCTTGTTTTTTAGAGAAAAAAAAATAGTAACAAAGTAATATATTCTCTTGATATCAATATTTTACTTTTTTTTCTTTTTTGAGGGGACATACTTGCATGTAAATCATTCACGGGTTTACTCTCTTTTATTAAATTATAGAATATCAAGGTTCGGTATGTATCTTTATATCAATGCCATTATTGCCATTTGCTATGTCGTCCACGTACAATAGTGTGATAAATAGACTTAAAAACAGTACTGGAGTTAGATTGGACCACTTTAACATAATAATTTCATGTAGCTAATAGTAGTATATAGTATTTTTTTTATAATAATCTAATGTAGTAAAGATGTAGTAAAAGTAACAATATACACAAATTTTAAACAAAACGAGGATAATAAATAATTCAGTTAGTGGAATTCACAATTCAGCTCAGCTTATTAAGATTGACTACTGTAACTACCTTTATTTTGTTGCACATAAAATCTTGTCATAGATCCATTTTCTAACGTGACATCATCGTCTTGTTTTATGTATATTAATTTTTGTCATGCCACTTCCTATGTCTCTTTCACATTTATTTCATTTGTTATTTTCACCTAAATATAATAAATACGCAAAAATAGAATGATATGACAGAATAATGAAATTTTATTAGATATCAATGAAATTTTATTTTTGGACGAAATATCAATGTAAAATTTTCAGATATCAAGATGGTCACTATAAAAATATATGTATCAAAAGTTGTGCATCCAACTTCTTAAAAATTAAAATATTATTCCCTCAAAAAAAAAATTAAAAATATTCTGTTTTTCAATGTAAAATTGATCTTTTCGAGTTTATTAATATGTGCCCTTATGGCACAAGTTAATGTGACCATTTTTCTAAATATCTAATTATATTTCATTTCTATTGAAATTGTTAGGGTATGCTAGCAGTGACATTAACAGCATGGTTACCACAATTACACCCTCCATCTTGCACACCTCAACAACAAGCACTGAATCAATGTGTTACTGCAAACTCATCTCAAGTTGGTTTTCTATTCATGGGACTTATATTTCTAAGCATAGGTTCTTCAGGTATAAGACCATGTAGCATACCATTTGGTGTTGACCAATTTGACCCTACAACAGATGAAGGAAAAAAAGGGATCAATAGTTTCTTTAATTGGTATTATACATCATTTACAGTGGTATTGTTATTCACTCAAACAGTGATTGTTTACATCCAAGACTCAGTTAGTTGGAAATTTGGTTTTGCTATACCAACTTTATGCATGTTATTTTCCATAATTTTGTTCTTTATTGGAACAAAGATTTATGTGCATGTGAAGCCAGAAGGAAGCATTTTTTCTAGTATTGCACAAGTTTTAGTGGCTTCTTTTAGAAAGAGAAAAGTGAAGCTTCCAAATGAGAAACATGCTGATGGGATTTTTTATGATCCTCCATTAATTGGGAAAGCCATTTTGTCAAAGCTACCTCCAACCAACCAATTCAAGTAAGATATCTCTGTCTTTAATAATTATTGCAATAATTATGTTTATTTATTATATATGGTCACGTATGTCGTTTTTTTTATAAATATTATTAGCTAATAATTAGAGTTGCTAGTGCTACCACCAACAATAACTAACCCCGCAAGAAATCTTTACTTATTGCTTTTACAACTTATTCACCTTTTGGAATCATTATTATATTTGTTAGCCATTTTTATAAAGGAAAATTATTTTTGTGCACCTATTACTCATTCTAGGTCAAGAGAGGGATAGAAAAAGATAGAGGGATGTGATAAATGTGATAAATAAATAATGTGATAGAAACACAGAGATAGGTAGATAAAATAAACTGTTGAATGAGTGTGAGGAAATTAAAGGCGTATAAATATAAGAGTTGTTTACAAAAATTTGATATCTATATCATAAAGAGTTATATTATTTTCACACAAAAATTTGATATCAAATTTCTACAACAAATTAGATGACTAGAATTGTGTCAAAATTTTATTTTTCATTTAGAATTGAGAAATTAAAATGAGTTTAACATTTTTTAAAAGACCAAATACGACTTTTTCCATATTTAGCCAAAAGATATTTAAGTTATTATTTATTACATTTGTTCTAAAATCTAACTATAAATTCATATGTATAATCTAGGGTTTTGGATAAAGCTGCTCTAGTAATGGAGGGTGATTTAAACCCAGATGGAACAATCGTTAATAACTGGAACCTTGTCAGCATCCAGCAAGTAGAAGAGGTAAAATGCTTAGCAAGAACATTTCCAATTTGGGCAGCCGGTATCCTAGGTTTCACCGCGATGGCGCAACAAGGAACATTTATTGTATCACAAGCCATGAAAATGGACCGACACCTCGGACCAAAATTCCAAATCCCAGCCGGTTCACTCGGAGTCATATCGTTGATCGTCATAGGTTTATGGGTCCCATTCTACGACCGGATATGTGTACCATCACTAAGAAAAATTACAAAGAATGAAGGAGGAATCACTCTCCTCCAAAGAATCGGAATTGGCATGGTATTCTCCATTATATCAATGATTGTAGCTGGTTTGGTTGAAAAAGTTAGAAGAGATGTAGCAAATTCTAATCCAAGTCCACAAGGAATTGCTCCTATGTCAGTAATGTGGCTATTCCCACAATTGGTTTTGTTGGGTTTTTGTGAGGCATTCAACATAATTGGATTAATTGAGTTCTTCAATAGACAATTTCCTGATCATATGAGAAGCATTGCTAATGCTTTGTTCTCTTGCTCTTTTGCTTTGGCTAATTATGTTAGTAGCATATTGGTCACCACTGTTCATAGTGTCACAAAAACACATAGCCATCCAGATTGGTTGACAAATAATATCAATGATGGAAGGTTAGATTACTTTTACTACCTTCTAGCTGGGGTTGGAGTTCTCAACTTGGTTTACTTTTTGTATGTTTCTTCAAGATATCGTTACAAAGGAAGTGTTGATATCCAAGAGAAACCTCTGGATGTGGAGTTAGGTTCAAAAGGAGAAATAGATTACTATCCAAAGAAGTATGAAGATTCTAAATAG
Protein sequence

>MS.gene066281.t1

MSAEDNGTNLSDFPPSTIEKEPNYEKHGNKKPGGWKAMPFILGNESFERLAAFGLLANFMVYLTREFHLEQVHASNILNIWGGISNFAPLLGAFISDTYTGRFKTIAFASFFSLLGMLAVTLTAWLPQLHPPSCTPQQQALNQCVTANSSQVGFLFMGLIFLSIGSSGIRPCSIPFGVDQFDPTTDEGKKGINSFFNWYYTSFTVVLLFTQTVIVYIQDSVSWKFGFAIPTLCMLFSIILFFIGTKIYVHVKPEGSIFSSIAQVLVASFRKRKVKLPNEKHADGIFYDPPLIGKAILSKLPPTNQFKVLDKAALVMEGDLNPDGTIVNNWNLVSIQQVEEAFNIIGLIEFFNRQFPDHMRSIANALFSCSFALANYVSSILVTTVHSVTKTHSHPDWLTNNINDGRLDYFYYLLAGVGVLNLVYFLYVSSRYRYKGSVDIQEKPLDVELGSKGEIDYYPKKYEDSK