AlfalfaGEDB | MS.gene066326

M. sativa cultivar XinJiangDaYe / MS.gene066326

KEGG: K25006
GO: GO:0003674 GO:0003676 GO:0005488 GO:0097159 GO:1901363
PFAM: PF00076.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066326.t1	XP_003615131.1	88.1	286	30	2	1	285	1	283	1.10E-117	433

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066326.t1	Q9M1S3	66.3	92	30	1	10	100	11	102	1.2e-27	125.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066326.t1	G7KBA8	88.1	286	30	2	1	285	1	283	8.0e-118	433.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene052169	MS.gene066326	0.819486	1.13E-52	-1.69E-46
MS.gene054662	MS.gene066326	0.834497	2.90E-56	-1.69E-46
MS.gene05652	MS.gene066326	0.823192	1.58E-53	-1.69E-46
MS.gene05929	MS.gene066326	0.807683	4.48E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066326.t1	MTR_5g064120	96.853	286	5	2	1	285	1	283	0.0	546
MS.gene066326.t1	MTR_3g116130	59.794	194	70	5	7	198	20	207	5.06e-60	192
MS.gene066326.t1	MTR_3g116130	60.104	193	69	5	8	198	21	207	1.09e-59	194
MS.gene066326.t1	MTR_4g035310	64.800	125	31	4	9	120	9	133	2.30e-47	159
MS.gene066326.t1	MTR_4g035310	64.800	125	31	4	9	120	9	133	2.46e-47	159
MS.gene066326.t1	MTR_8g024520	77.273	88	20	0	7	94	16	103	7.69e-46	155
MS.gene066326.t1	MTR_8g024520	77.273	88	20	0	7	94	16	103	8.11e-46	155
MS.gene066326.t1	MTR_7g117495	73.333	90	24	0	8	97	10	99	1.53e-44	152
MS.gene066326.t1	MTR_7g117495	73.333	90	24	0	8	97	10	99	1.55e-44	151
MS.gene066326.t1	MTR_3g092490	70.330	91	26	1	9	99	19	108	9.67e-43	144
MS.gene066326.t1	MTR_3g092490	69.565	92	27	1	8	99	18	108	2.36e-41	143
MS.gene066326.t1	MTR_3g092490	69.565	92	27	1	8	99	18	108	2.42e-41	143
MS.gene066326.t1	MTR_2g026180	40.367	109	49	3	17	110	5	112	2.61e-21	93.6
MS.gene066326.t1	MTR_2g026180	29.530	149	94	3	17	158	107	251	3.92e-13	69.7
MS.gene066326.t1	MTR_4g088010	48.193	83	43	0	12	94	72	154	3.47e-18	83.6
MS.gene066326.t1	MTR_8g463890	44.578	83	46	0	12	94	69	151	4.86e-18	84.0
MS.gene066326.t1	MTR_8g463890	32.500	120	73	2	12	124	161	279	5.51e-13	68.9
MS.gene066326.t1	MTR_7g088140	41.667	84	49	0	11	94	122	205	7.42e-17	80.5
MS.gene066326.t1	MTR_3g055990	41.096	73	42	1	12	84	2	73	8.26e-17	80.5
MS.gene066326.t1	MTR_3g055990	41.096	73	42	1	12	84	2	73	8.47e-17	80.5
MS.gene066326.t1	MTR_7g088140	41.667	84	49	0	11	94	122	205	1.42e-16	79.7
MS.gene066326.t1	MTR_1g073690	38.750	80	48	1	12	91	2	80	5.98e-16	77.8
MS.gene066326.t1	MTR_5g088220	39.759	83	50	0	12	94	161	243	1.59e-15	76.6
MS.gene066326.t1	MTR_4g070190	44.737	76	41	1	17	91	9	84	2.87e-15	72.4
MS.gene066326.t1	MTR_7g013730	42.169	83	46	2	17	98	41	122	8.02e-15	72.8
MS.gene066326.t1	MTR_5g097580	40.000	75	44	1	17	91	7	80	3.57e-14	72.8
MS.gene066326.t1	MTR_4g070140	43.421	76	42	1	17	91	9	84	3.69e-14	69.7
MS.gene066326.t1	MTR_5g097580	40.000	75	44	1	17	91	7	80	3.81e-14	72.4
MS.gene066326.t1	MTR_3g084040	40.580	69	41	0	16	84	36	104	2.31e-13	66.6
MS.gene066326.t1	MTR_2g026180	29.530	149	94	3	17	158	37	181	2.57e-13	70.1
MS.gene066326.t1	MTR_4g070080	41.892	74	42	1	17	89	7	80	2.68e-13	66.6
MS.gene066326.t1	MTR_3g084040	40.909	66	39	0	16	81	36	101	3.54e-13	65.1
MS.gene066326.t1	MTR_4g109540	40.964	83	47	2	16	97	42	123	4.95e-13	68.2
MS.gene066326.t1	MTR_4g063560	42.254	71	40	1	16	85	33	103	9.52e-13	63.9
MS.gene066326.t1	MTR_3g080130	37.037	81	41	2	16	96	36	106	1.23e-12	64.3
MS.gene066326.t1	MTR_3g025880	40.449	89	51	2	10	97	38	125	1.74e-12	67.4
MS.gene066326.t1	MTR_7g013740	40.964	83	47	2	17	98	41	122	2.09e-12	63.9
MS.gene066326.t1	MTR_7g105260	34.831	89	54	1	17	105	33	117	3.92e-12	63.2
MS.gene066326.t1	MTR_3g103420	37.500	80	49	1	12	91	6	84	1.26e-11	64.7
MS.gene066326.t1	MTR_3g082650	34.722	72	46	1	17	88	19	89	9.45e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066326.t1	AT1G22330	65.534	206	51	7	5	202	6	199	1.83e-64	204
MS.gene066326.t1	AT1G78260	54.724	254	76	10	5	230	6	248	2.36e-57	186
MS.gene066326.t1	AT1G78260	57.874	254	68	10	5	230	6	248	8.01e-57	184
MS.gene066326.t1	AT1G76460	49.138	232	87	9	5	216	12	232	3.38e-54	177
MS.gene066326.t1	AT1G20880	78.947	95	19	1	5	98	12	106	5.56e-51	169
MS.gene066326.t1	AT1G20880	78.947	95	19	1	5	98	12	106	5.56e-51	169
MS.gene066326.t1	AT1G20880	78.947	95	19	1	5	98	12	106	5.56e-51	169
MS.gene066326.t1	AT1G33470	52.229	157	70	4	12	166	3	156	2.40e-46	156
MS.gene066326.t1	AT1G33470	52.229	157	70	4	12	166	3	156	3.12e-46	155
MS.gene066326.t1	AT2G46780	48.731	197	79	8	12	191	18	209	7.25e-45	155
MS.gene066326.t1	AT2G46780	48.731	197	79	8	12	191	18	209	7.25e-45	155
MS.gene066326.t1	AT1G33470	52.980	151	66	4	12	160	3	150	7.92e-45	152
MS.gene066326.t1	AT1G22910	69.388	98	28	1	10	105	7	104	1.66e-43	149
MS.gene066326.t1	AT1G22910	69.388	98	28	1	10	105	7	104	5.21e-43	147
MS.gene066326.t1	AT1G22910	67.308	104	27	2	10	111	7	105	9.79e-43	149
MS.gene066326.t1	AT3G54770	66.304	92	30	1	10	100	11	102	1.40e-37	134
MS.gene066326.t1	AT3G54770	66.304	92	30	1	10	100	11	102	2.04e-37	133
MS.gene066326.t1	AT5G11412	58.889	90	37	0	5	94	41	130	1.02e-34	124
MS.gene066326.t1	AT5G53680	49.000	100	47	2	5	101	3	101	1.41e-29	110
MS.gene066326.t1	AT5G53720	54.430	79	36	0	16	94	9	87	1.12e-25	98.2
MS.gene066326.t1	AT3G06970	47.423	97	50	1	12	107	8	104	1.36e-25	103
MS.gene066326.t1	AT3G54770	66.176	68	22	1	32	98	1	68	9.72e-25	99.4
MS.gene066326.t1	AT5G47620	47.826	69	35	1	16	84	6	73	2.47e-18	84.7
MS.gene066326.t1	AT5G47620	47.826	69	35	1	16	84	6	73	2.47e-18	84.7
MS.gene066326.t1	AT5G47620	47.826	69	35	1	16	84	6	73	2.47e-18	84.7
MS.gene066326.t1	AT5G47620	47.826	69	35	1	16	84	6	73	2.85e-18	84.7
MS.gene066326.t1	AT2G22090	43.373	83	47	0	12	94	100	182	1.53e-17	82.0
MS.gene066326.t1	AT2G22090	43.373	83	47	0	12	94	100	182	1.66e-17	81.6
MS.gene066326.t1	AT3G15010	45.783	83	45	0	12	94	71	153	3.08e-17	81.3
MS.gene066326.t1	AT3G15010	33.571	140	77	3	8	132	159	297	7.32e-16	77.4
MS.gene066326.t1	AT3G15010	45.783	83	45	0	12	94	71	153	3.08e-17	81.3
MS.gene066326.t1	AT3G15010	33.571	140	77	3	8	132	159	297	7.32e-16	77.4
MS.gene066326.t1	AT4G26650	41.667	72	41	1	13	84	12	82	3.15e-17	81.6
MS.gene066326.t1	AT4G26650	41.667	72	41	1	13	84	9	79	3.34e-17	81.6
MS.gene066326.t1	AT4G39260	40.625	96	45	3	17	111	7	91	4.62e-17	75.1
MS.gene066326.t1	AT5G55550	41.096	73	42	1	12	84	2	73	5.34e-17	80.9
MS.gene066326.t1	AT5G55550	41.096	73	42	1	12	84	2	73	5.34e-17	80.9
MS.gene066326.t1	AT5G55550	41.096	73	42	1	12	84	2	73	5.34e-17	80.9
MS.gene066326.t1	AT5G55550	41.096	73	42	1	12	84	2	73	5.34e-17	80.9
MS.gene066326.t1	AT5G55550	41.096	73	42	1	12	84	2	73	5.34e-17	80.9
MS.gene066326.t1	AT5G55550	41.096	73	42	1	12	84	2	73	6.75e-17	80.9
MS.gene066326.t1	AT5G55550	41.096	73	42	1	12	84	2	73	6.80e-17	80.9
MS.gene066326.t1	AT5G55550	41.096	73	42	1	12	84	2	73	6.80e-17	80.9
MS.gene066326.t1	AT5G55550	41.096	73	42	1	12	84	2	73	6.80e-17	80.9
MS.gene066326.t1	AT5G55550	41.096	73	42	1	12	84	2	73	6.80e-17	80.9
MS.gene066326.t1	AT5G55550	41.096	73	42	1	12	84	2	73	7.29e-17	80.9
MS.gene066326.t1	AT4G39260	43.421	76	42	1	17	91	7	82	7.86e-17	75.5
MS.gene066326.t1	AT4G39260	43.421	76	42	1	17	91	7	82	2.16e-16	75.5
MS.gene066326.t1	AT4G13850	40.909	88	48	2	16	102	35	119	3.36e-16	74.3
MS.gene066326.t1	AT2G41060	39.759	83	50	0	12	94	124	206	3.98e-16	78.6
MS.gene066326.t1	AT2G41060	39.759	83	50	0	12	94	124	206	3.98e-16	78.6
MS.gene066326.t1	AT2G41060	39.759	83	50	0	12	94	124	206	3.98e-16	78.6
MS.gene066326.t1	AT4G13850	40.909	88	48	2	16	102	35	119	4.14e-16	74.3
MS.gene066326.t1	AT4G13850	40.909	88	48	2	16	102	35	119	4.64e-16	74.3
MS.gene066326.t1	AT3G23830	38.636	88	50	2	16	102	35	119	6.11e-16	73.6
MS.gene066326.t1	AT3G23830	38.636	88	50	2	16	102	35	119	6.11e-16	73.6
MS.gene066326.t1	AT4G39260	45.161	62	34	0	17	78	7	68	7.45e-16	72.4
MS.gene066326.t1	AT3G07810	40.000	75	44	1	17	91	7	80	3.18e-15	75.9
MS.gene066326.t1	AT3G07810	40.000	75	44	1	17	91	7	80	3.28e-15	75.9
MS.gene066326.t1	AT2G21660	42.683	82	45	2	11	91	4	84	4.91e-15	71.6
MS.gene066326.t1	AT2G21660	42.683	82	45	2	11	91	4	84	7.02e-15	71.6
MS.gene066326.t1	AT4G13850	41.667	72	38	1	16	87	35	102	7.87e-15	70.1
MS.gene066326.t1	AT3G56860	39.759	83	50	0	12	94	136	218	9.76e-15	74.3
MS.gene066326.t1	AT3G56860	39.759	83	50	0	12	94	136	218	9.76e-15	74.3
MS.gene066326.t1	AT3G56860	39.759	83	50	0	12	94	136	218	9.76e-15	74.3
MS.gene066326.t1	AT3G56860	39.759	83	50	0	12	94	136	218	9.76e-15	74.3
MS.gene066326.t1	AT3G56860	39.759	83	50	0	12	94	136	218	9.76e-15	74.3
MS.gene066326.t1	AT3G56860	39.759	83	50	0	12	94	136	218	9.76e-15	74.3
MS.gene066326.t1	AT3G56860	39.759	83	50	0	12	94	136	218	9.76e-15	74.3
MS.gene066326.t1	AT3G56860	39.759	83	50	0	12	94	136	218	9.76e-15	74.3
MS.gene066326.t1	AT3G56860	39.759	83	50	0	12	94	136	218	9.76e-15	74.3
MS.gene066326.t1	AT3G56860	39.759	83	50	0	12	94	136	218	9.76e-15	74.3
MS.gene066326.t1	AT3G56860	39.759	83	50	0	12	94	136	218	9.76e-15	74.3
MS.gene066326.t1	AT2G33410	35.870	92	57	2	17	108	7	96	2.36e-14	73.2
MS.gene066326.t1	AT2G19380	39.506	81	49	0	12	92	404	484	2.40e-14	73.6
MS.gene066326.t1	AT4G14300	36.709	79	46	1	12	86	2	80	4.56e-14	72.0
MS.gene066326.t1	AT4G14300	36.709	79	46	1	12	86	2	80	4.56e-14	72.0
MS.gene066326.t1	AT1G17640	41.667	72	41	1	17	88	67	137	7.68e-14	71.2
MS.gene066326.t1	AT1G17640	46.667	60	32	0	17	76	158	217	9.71e-11	62.0
MS.gene066326.t1	AT1G17640	41.667	72	41	1	17	88	67	137	7.68e-14	71.2
MS.gene066326.t1	AT1G17640	46.667	60	32	0	17	76	158	217	9.71e-11	62.0
MS.gene066326.t1	AT1G17640	41.667	72	41	1	17	88	67	137	7.68e-14	71.2
MS.gene066326.t1	AT1G17640	46.667	60	32	0	17	76	158	217	9.71e-11	62.0
MS.gene066326.t1	AT2G22100	29.032	186	113	7	6	178	153	332	1.85e-13	70.1
MS.gene066326.t1	AT3G26420	40.580	69	40	1	17	84	8	76	3.66e-12	65.1
MS.gene066326.t1	AT5G04280	35.294	102	60	2	16	115	7	104	1.02e-11	64.7
MS.gene066326.t1	AT1G74230	37.662	77	48	0	16	92	34	110	1.21e-11	64.3
MS.gene066326.t1	AT5G61030	33.333	78	48	1	16	93	40	113	1.59e-11	63.9
MS.gene066326.t1	AT5G61030	33.333	78	48	1	16	93	40	113	1.59e-11	63.9
MS.gene066326.t1	AT1G18630	41.429	70	40	1	16	84	36	105	1.68e-11	61.6
MS.gene066326.t1	AT5G59865	48.980	49	25	0	16	64	26	74	3.02e-11	59.7
MS.gene066326.t1	AT1G22910	65.217	46	14	1	62	105	8	53	3.07e-11	62.0
MS.gene066326.t1	AT3G13224	29.464	112	66	3	17	128	20	118	6.98e-11	61.2

Find 91 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAATACTATCAACAACTTTA+TGG	0.198535	5.4:+49814960	MS.gene066326:CDS
CCACATTATCGATCACAATT+TGG	0.217645	5.4:+49810537	MS.gene066326:CDS
GGAGAAGGTTGCCTTATTAA+TGG	0.270286	5.4:-49815167	None:intergenic
ATGGGTTCACCATATTATTA+TGG	0.277771	5.4:+49814999	MS.gene066326:CDS
CTTCCATCAATTACCGGGTT+TGG	0.284543	5.4:-49810849	None:intergenic
ACTTGAGGGTACCCGTATTC+AGG	0.296691	5.4:-49814773	None:intergenic
CAAGCCCTTCTAGCTGATTC+TGG	0.316155	5.4:-49810819	None:intergenic
CACTTCAACAACCATTAATA+AGG	0.322262	5.4:+49815156	MS.gene066326:CDS
AGCTTGTATGCGATGTGGTT+GGG	0.337761	5.4:-49815066	None:intergenic
GCTCTTCTTCCATCAATTAC+CGG	0.348588	5.4:-49810855	None:intergenic
GCTCCTTCCATTGGTGTAGT+AGG	0.367515	5.4:-49815110	None:intergenic
CCGTATGGTTGGTACATAAC+TGG	0.383017	5.4:-49811504	None:intergenic
CCGTACGCCGCTGCTGCTCC+TGG	0.386027	5.4:-49811429	None:intergenic
ATAGAATAGCCATAATAATA+TGG	0.394438	5.4:-49815008	None:intergenic
CCCACCTACACTCCTGAATA+CGG	0.401412	5.4:+49814761	MS.gene066326:CDS
GTGATCCAGAATCAGCTAGA+AGG	0.404501	5.4:+49810814	MS.gene066326:CDS
GGCAGGAGGGCCACCACAAA+TGG	0.409472	5.4:+49811461	MS.gene066326:CDS
TGTAGTAGGGTAGTATAGAT+AGG	0.410340	5.4:-49815096	None:intergenic
AATTGTAACATTGCTTCTCT+TGG	0.414331	5.4:+49810879	MS.gene066326:CDS
CCTCTTGGTGGTGATGGTCT+AGG	0.428010	5.4:-49810906	None:intergenic
GTTGCTCCTCCTGCCATTTG+TGG	0.434650	5.4:-49811474	None:intergenic
GATCCAAACCCGGTAATTGA+TGG	0.454852	5.4:+49810846	MS.gene066326:CDS
TAATTACCTCTTGGTGGTGA+TGG	0.454939	5.4:-49810912	None:intergenic
TGGACCATCATCTTCAACAA+TGG	0.459048	5.4:+49814980	MS.gene066326:CDS
ACCTCATCAGAGACAGCATC+TGG	0.463906	5.4:+49817461	MS.gene066326:CDS
CTCTTCTTCCATCAATTACC+GGG	0.464479	5.4:-49810854	None:intergenic
ATTATCACTGATAAGAATAC+AGG	0.469048	5.4:+49810666	MS.gene066326:CDS
AGGAGCACCAGGAGCAGCAG+CGG	0.469301	5.4:+49811422	MS.gene066326:CDS
GGAGGGCCACCACAAATGGC+AGG	0.475742	5.4:+49811465	MS.gene066326:CDS
GGACCATCATCTTCAACAAT+GGG	0.476751	5.4:+49814981	MS.gene066326:CDS
GGTGTGGGGACAGGAGCACC+AGG	0.477832	5.4:+49811411	MS.gene066326:CDS
AGCGGCGTACGGTGGTGTTC+CGG	0.480148	5.4:+49811440	MS.gene066326:CDS
TACGGTGGTGTTCCGGCAGG+AGG	0.481590	5.4:+49811447	MS.gene066326:CDS
TGAAATTAATTACCTCTTGG+TGG	0.486134	5.4:-49810918	None:intergenic
ATTTGTGGTGGCCCTCCTGC+CGG	0.491579	5.4:-49811459	None:intergenic
CAGCTTGTATGCGATGTGGT+TGG	0.492117	5.4:-49815067	None:intergenic
TATGTCCTCATTTCATCAGT+TGG	0.492209	5.4:-49810609	None:intergenic
GTGAAAGAAGCTCCTTCCAT+TGG	0.509833	5.4:-49815119	None:intergenic
TGGAGACACAACATTCACTA+AGG	0.512883	5.4:+49810557	MS.gene066326:CDS
TATTGTGCTTGCTGAATCTG+TGG	0.514006	5.4:-49814942	None:intergenic
CCAGGAGCAGCAGCGGCGTA+CGG	0.514321	5.4:+49811429	MS.gene066326:CDS
AAGAATACAGGAAAATCTAA+AGG	0.522577	5.4:+49810678	MS.gene066326:CDS
GCTCCTCCTGCCATTTGTGG+TGG	0.523998	5.4:-49811471	None:intergenic
GCGTACGGTGGTGTTCCGGC+AGG	0.524319	5.4:+49811444	MS.gene066326:CDS
GCAGGGAGGGGTACATATCA+AGG	0.525507	5.4:+49811384	MS.gene066326:intron
CTCCTTCCATTGGTGTAGTA+GGG	0.529189	5.4:-49815109	None:intergenic
AGGGGTACATATCAAGGTGG+GGG	0.532228	5.4:+49811390	MS.gene066326:CDS
ACAGGAAAATCTAAAGGATA+CGG	0.534361	5.4:+49810684	MS.gene066326:CDS
GCTTGTATGCGATGTGGTTG+GGG	0.534607	5.4:-49815065	None:intergenic
CAACCACATCGCATACAAGC+TGG	0.537393	5.4:+49815068	MS.gene066326:CDS
CCCGTATTCAGGAGTGTAGG+TGG	0.540062	5.4:-49814762	None:intergenic
CCAGTTATGTACCAACCATA+CGG	0.541049	5.4:+49811504	MS.gene066326:CDS
CTTATTAATGGTTGTTGAAG+TGG	0.545928	5.4:-49815155	None:intergenic
AAAGATTACCACTAGGAGAA+GGG	0.546590	5.4:-49815193	None:intergenic
GAGGGGTACATATCAAGGTG+GGG	0.550871	5.4:+49811389	MS.gene066326:CDS
CCAAATTGTGATCGATAATG+TGG	0.553655	5.4:-49810537	None:intergenic
GAAAGATTACCACTAGGAGA+AGG	0.553884	5.4:-49815194	None:intergenic
GGGAGGGGTACATATCAAGG+TGG	0.557161	5.4:+49811387	MS.gene066326:intron
CTAGGAGAAGGGGTAGGAGA+AGG	0.561216	5.4:-49815182	None:intergenic
TCGGAAAGATCAAATACTCA+AGG	0.564163	5.4:+49817497	MS.gene066326:CDS
AGCTAACTTACCCGTATGGT+TGG	0.569031	5.4:-49811515	None:intergenic
ATCTGGAGTAGTTATAACTT+CGG	0.572225	5.4:+49817478	MS.gene066326:CDS
GGAGGGGTACATATCAAGGT+GGG	0.575240	5.4:+49811388	MS.gene066326:CDS
ATTGTGCTTGCTGAATCTGT+GGG	0.576111	5.4:-49814941	None:intergenic
CCACCTACACTCCTGAATAC+GGG	0.576471	5.4:+49814762	MS.gene066326:CDS
TGATCCAGAATCAGCTAGAA+GGG	0.577679	5.4:+49810815	MS.gene066326:CDS
ATACTACCCTACTACACCAA+TGG	0.581425	5.4:+49815103	MS.gene066326:CDS
TATGCAAGCAGCAGCACCAA+GGG	0.588236	5.4:+49815028	MS.gene066326:CDS
GTAGGGTAGTATAGATAGGA+TGG	0.589808	5.4:-49815092	None:intergenic
CCGTATTCAGGAGTGTAGGT+GGG	0.589906	5.4:-49814761	None:intergenic
TCTCCTACCCCTTCTCCTAG+TGG	0.593229	5.4:+49815185	MS.gene066326:CDS
AAGATTACCACTAGGAGAAG+GGG	0.593298	5.4:-49815192	None:intergenic
GGTGTTGAAAATGTACCCCT+TGG	0.604699	5.4:-49815044	None:intergenic
CAGTTATGTACCAACCATAC+GGG	0.607115	5.4:+49811505	MS.gene066326:CDS
AAACTCCAACTGATGAAATG+AGG	0.611186	5.4:+49810604	MS.gene066326:CDS
ACATAGCTAACTTACCCGTA+TGG	0.611192	5.4:-49811519	None:intergenic
CGGAAAGATCAAATACTCAA+GGG	0.612666	5.4:+49817498	MS.gene066326:CDS
GAACCCATTGTTGAAGATGA+TGG	0.613054	5.4:-49814984	None:intergenic
GGCTTGTGCTGATCCAAACC+CGG	0.613733	5.4:+49810836	MS.gene066326:CDS
GGAGCAGCAGCGGCGTACGG+TGG	0.617356	5.4:+49811432	MS.gene066326:CDS
GGGCCACCACAAATGGCAGG+AGG	0.622370	5.4:+49811468	MS.gene066326:CDS
CGTATTCAGGAGTGTAGGTG+GGG	0.623905	5.4:-49814760	None:intergenic
TCCAGATGCTGTCTCTGATG+AGG	0.638137	5.4:-49817462	None:intergenic
ACGGTGGTGTTCCGGCAGGA+GGG	0.640460	5.4:+49811448	MS.gene066326:CDS
TACCCTACTACACCAATGGA+AGG	0.640780	5.4:+49815107	MS.gene066326:CDS
CTATGCAAGCAGCAGCACCA+AGG	0.651575	5.4:+49815027	MS.gene066326:CDS
GTACCCGTATTCAGGAGTGT+AGG	0.661197	5.4:-49814765	None:intergenic
CCTAGACCATCACCACCAAG+AGG	0.681390	5.4:+49810906	MS.gene066326:CDS
TTACCACTAGGAGAAGGGGT+AGG	0.689545	5.4:-49815188	None:intergenic
GGTCCAGCTTGTATGCGATG+TGG	0.710376	5.4:-49815071	None:intergenic
ATGCAAGCAGCAGCACCAAG+GGG	0.733849	5.4:+49815029	MS.gene066326:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr5.4	gene	49810528	49817535	49810528	ID=MS.gene066326
chr5.4	mRNA	49810528	49817535	49810528	ID=MS.gene066326.t1;Parent=MS.gene066326
chr5.4	exon	49810528	49810710	49810528	ID=MS.gene066326.t1.exon1;Parent=MS.gene066326.t1
chr5.4	CDS	49810528	49810710	49810528	ID=cds.MS.gene066326.t1;Parent=MS.gene066326.t1
chr5.4	exon	49810804	49810927	49810804	ID=MS.gene066326.t1.exon2;Parent=MS.gene066326.t1
chr5.4	CDS	49810804	49810927	49810804	ID=cds.MS.gene066326.t1;Parent=MS.gene066326.t1
chr5.4	exon	49811388	49811526	49811388	ID=MS.gene066326.t1.exon3;Parent=MS.gene066326.t1
chr5.4	CDS	49811388	49811526	49811388	ID=cds.MS.gene066326.t1;Parent=MS.gene066326.t1
chr5.4	exon	49814757	49814793	49814757	ID=MS.gene066326.t1.exon4;Parent=MS.gene066326.t1
chr5.4	CDS	49814757	49814793	49814757	ID=cds.MS.gene066326.t1;Parent=MS.gene066326.t1
chr5.4	exon	49814927	49815206	49814927	ID=MS.gene066326.t1.exon5;Parent=MS.gene066326.t1
chr5.4	CDS	49814927	49815206	49814927	ID=cds.MS.gene066326.t1;Parent=MS.gene066326.t1
chr5.4	exon	49817441	49817535	49817441	ID=MS.gene066326.t1.exon6;Parent=MS.gene066326.t1
chr5.4	CDS	49817441	49817535	49817441	ID=cds.MS.gene066326.t1;Parent=MS.gene066326.t1

Gene Sequence

>MS.gene066326

ATGGCTTATCCACATTATCGATCACAATTTGGAGACACAACATTCACTAAGGTTTTTGTTGGAGGACTAGCTTGGGAAACTCCAACTGATGAAATGAGGACATATTTTGAACAATTTGGTGACATACTTGAAGCTGTCATTATCACTGATAAGAATACAGGAAAATCTAAAGGATACGGATTTGTATGTCTCTCTCACTCTCTCTATATTTATCATAATCATCATATAATATATACTTTGTAAATTATATATGATAAACATTGAATTAATGTGCAGGTAACATTTCGTGATCCAGAATCAGCTAGAAGGGCTTGTGCTGATCCAAACCCGGTAATTGATGGAAGAAGAGCTAATTGTAACATTGCTTCTCTTGGTCGTCCTAGACCATCACCACCAAGAGGTAATTAATTTCATTGTTTATTTTCAACCACTAATGTTTTTATTTATGAAATTATATTTTATATACTATTTATAATTTCGGCCCGTCCTACAATAATCGATCTATTTGACTATTTCTAACTGATAAAAAAAAGAATAATTTTTTTATTAAATAATGTGAAATATATAGAATTGAGAGTGATGTATGCAGCATTAATGAAATAATACAATAAATAAAATATAATTAATATCACCATAAAAATTAAGTGGTCATCGTTTTAGGACAAATATTTTTATGTAAATAGATCGGTCATTATTATCATTCTTTTACTACTCGAAAAAATATTTTTATCGACAAAGATCAATGACCAAAAAAATGAAATTCATCTCTAACTTTCTGTCACTAAATGCTGTTATTAATTTATTTGTTTACACATGAAATGATAAAGTATATTTTGGTGGATTGTAATGTAATGCTGCAGGGAGGGGTACATATCAAGGTGGGGGTGTGGGGACAGGAGCACCAGGAGCAGCAGCGGCGTACGGTGGTGTTCCGGCAGGAGGGCCACCACAAATGGCAGGAGGAGCAACAGCAGCTCCAGTTATGTACCAACCATACGGGTAAGTTAGCTATGTGGTCATTTATTACTGTGGTCATTTATTAATTTACCCATGTTATGTAAATAGTAACTCATAGTCAGTCAAAGGGGTACTGGTCCATGGTATTAATTAGATAACTGCATATAGACGCACATATTGCTGTCTCCATATGTCTCTTGACTGCTCCCCCTCCAATTACAGTAGGTCTCATTGTCAGTGTCAAAATCCTCACATATCATTTCATATCATATAATAAAATAAACTAGTACTTCTCCAAACTTTGTTCTGCCTTACTCTTTTAAATCATCATGTGCATTCCCTTACTCTAAAATATATTAATCACCCCCCTTATGTAACCTTACTCTAAAAAATAATGAAAATTATTCTTACATTATCACCATGCATAGATGATCATATCCATATGTACTATAAGAAGTTGCATTTTCTGCATGATGATGTGTTTGTTTTAGGGTCATAATAATAATGTGTGTATTTCTTGGTTGATCTAAATATTTCTTAAATTTTGTGGAATTTGAGTTTGGACCTAGCTAACCCTGAAAATAAGCTTATGAATCAAGAGTTGCAACTAATTTATAGCCATTATTAAAGTCACATTACTATCTAATGTGGGATTATAAAAACAAGATTATGTGCAATAAAGTTATACATGAATTTTATAGGTAAAAAGAAGAAAATATTAAAAATAGAAAGGGGGGCTATAATGTGGTGGGTGAATTAAATTTTTGAATAATAAATATCAAAAACTAGAGAAAGGTCTAAGGAGATATGTAGATATATGTAGAAAAAAATGATGATGATAAATAGGTACTTTAATAGTAGATATGTAGTCCATGGCATGGTCAATAAAAAATGTAGTCCACGGCAAACACATGTAGTGGTCCTATATAGGTAGGTTAATTTGATTTATAATATTTTGTTACATGATAAAATCCCCCATCTCTTGGTACTTTTGTATGTCTTGTACCATCAAGTCATTTTCTCACCAGCAATGTTATTGTTGTCTTATGAGAACTGTATAAATTGCATGGTAAATTAATAAATACACTTATATATAAAACGATTATTATAAATATGCAAACAGCTACTTTTATGTTGTTTTAATAATTTTCATAGTTTTGCCTACAAGAGTTGAGTCTAGCATATTAGGCTAAACTTTCATAATGTGGTGAATCTAGGTTCAATCTCGGTTAAAAGATGTGTCCACATTTAGTATCCGACATTATATCGAATAAGATTGGTCAAAAAATGTTTTCACCGTCTTTTGAATAAAAAATATTTTTCCTAGTCTTTTGATCAAAAGAGAAATTTCACAGTTGTTCTTAAGGGCCTTAGAATGGCATAATATTGGGGGAGATACAAGTCCTGCATTAAAAAGGTATAAAATATGAAAATGATTTGTAAAGAGTAACATTTTACACATTACAAGTTGGGTAAATTACACTCACCTCCCCTGAGGTTTCTATAAACAACACAAAGACCCCCTCTAATTTAAAAATGAACATTAACCTCCCTTATTTGTTTCACTAATTAACATATACCTCCCTTGTATGTTAACGCCGTTAGTATCCAGTTAACTTCTTTGCTGCAGTGGAAGATTATGTTGGCTAAGATGTCTATCACCTTGGCAACTCCTTGCAAGGGAAATTGGCACCTCCATCTCAGGGGCAAATTGAGAAAAATTACACACTAGCGCAGTACAACGTGTCTGATTAATGTCTCCTGAAGCAAAAAGACAAAACTACAAATTCCTTTTATACATTACAGGGGACTGAATAATGTACAAACTGGGAAAAAAAATAAAGAGATTATAATGGAAAATATTAAACAAAATCAACCCATTGTTTTTATTTTTTTTTCGTGTGCTGAAAATTGATTTACCAGCCCCATTACGCCATTACATTAAATCCAACCTCCAATGGAACTCACAAACTTTTCACCACCTATCCTAATTTCTCTTCATGTTCAACTTATAGTTCAATTCAATGGATGAAATTACTTCATTCACTAGCATCATTAACATCATCAGTATTACTGCTACTCTCTGTCATCAATTCCAACTCAGAGCATTTGGATTCCTCAAAAAGGACATTGGTGAAATTGATTCGAAATTGACGACGGCGGACACACATCCTCTAGCGTTCGGATGTAGGTATACTGGCGATGGAGCTTTAATTTACACACTGGATAAAGATTGCACGTTGTGCTATAATGGAATAAACGAGAGTTGTTAAAAAAACAACTATCAACATTTTAGGATAACAGAGTTAGATTAGAGGGGAGGTGAGTGTTTTTTTAAAACTAGAGGGGGAATCTGTGTTGTTTAAACAAACCTCAGGGGAGGTAACTGTAATATACCCTTACAAGTTTGTGTCGTAAGTATGAGTTAGACTAAATATATAAAATTTATTGGTTCAAGTCATTTACCAAATTATTTACACGTTAATTAAGTCCAATAATGTTAGTCCTAAGGGGTCTATTGGAAAAAACTCGAGTAGCAAATCAAAAAGAGATGAACTTCAAAAATAGATTATACATAGTGACACTTTTTTTTTTATTTTTTATCATATTATAAGTTAGTTCGGTAAGAATAAGGTTAATCCAACATAATCAATACACAATACATATAAAAATAGCTTGGAATACATTATGAACCATGCAAGAAAGTTAATAATGTGACATATATATTAATATTAATCTGATACACTCTGTGAGTTCCCATGAGACTTCATATATATGTGCATGCAATATTTTCTTTTCCATACCATTATAATGTCATCTCGACCATTCTTTTTAATGCACTTTATTCCTTCCATTTTCTGCTTGATGGGTTTACATATTCATGAATCATAATGCCTTGGTTACATGAAAAAGGAGGCCATCACTGAAGTGAGTCATAATCAATTCAATCTTTGGGACATTAATATTATTACATACCATACCACAAAAAAAGAAATTGTACTATAGCTAGCTAAGCTTGAAGATCTCATTTCACATTGATCAATTTAAGGTCCCCACACGACAACCAAAAGCTATTGATAAGAAATTAATGCTTCTAATTTTTCTCACCGGAAACACCTCACAAATTAACTTCACTATACTACTAGTCCACAACAATAGAACTCTACCATTTTAAGTTGTTGCTTCTCTAAGAAACCAAATACATTACTGCATTCAACGTATTTCATTCCTTTTTTGCTTTGTAATTTAATTCCTTTCATCTTTGTTTGCAGCTACCCCACCTACACTCCTGAATACGGGTACCCTCAAGTAAGCATCTCCCTCCCATAATCATTTAAGATCATACAAAATTAGTACTAAATTTAGTCACAAAATTATACACAAATTTCATATATTTTTTTTAGTATTAGGTTAATTAATAATTTGTAATTTATGAGTACAGGCTACAATGTATAACCCACAGATTCAGCAAGCACAATACTATCAACAACTTTATGGACCATCATCTTCAACAATGGGTTCACCATATTATTATGGCTATTCTATGCAAGCAGCAGCACCAAGGGGTACATTTTCAACACCCCAACCACATCGCATACAAGCTGGACCATCCTATCTATACTACCCTACTACACCAATGGAAGGAGCTTCTTTCACTGCTGCATATCGTCCACTTCAACAACCATTAATAAGGCAACCTTCTCCTACCCCTTCTCCTAGTGGTAATCTTTCTATCCTCTTCTTTATATTAATTTAATTAATCCACCCTTTAATCTTTTCAAATTTACTCCATAAAATGTTGAATTGACACTAATATTCAACCTTTGGTATATCTAACATTTGACAATAAAATTAGACAATAAAATTGATACATGTTTTGTGTTTGAAACGTGTCGTGCTCACTTACATGACACTGATACGTATGATTTTTTTTTTTCTTTCTAATTTGTGATGAAGATTGCTTTTCTAACTTTCAAAAGTTCCTAATAACACATAGACTTAGCAGTAGTTAACTACCACTGACTTATAACTAAAAAACCGACGGTAGTTAACTACCATAGAATTTTTTGGTCATTTCCATGTGTTATCATGAACATCTTGAAGTCAGAAAAGTAAGCGTCATTTGTGATTGGTTTAATTTTTGTTTGATAATGCTTCTGTTACAAGAATGTGTGTAGTGTATAACGTACAATGTAGGATTTTACATACAAATCTGAATGAATAGAGAGAATTAGAGTGGGGTAAAAAGAAAGAGGGGTATGCACAGAGATTTATGAATTATGATGCTCATCACTTGCTGACACACAATATATATTATGATTTTGCTATAACATGTGGACACAGGGGTCCACATGGGTAACCCAAGACCCATGTGAATGAGCTGTCTTGGTTGTGATATTAACCGTATTATGTATGTATGGGTCAATGAGAGAGAGTGAGAAGAGGGTCATCATGTAAATTAACAGTGAATGCATGTGGTTTCTGTATGCATGGTGGTTAATTCTTTAAAGATCCAGTCAAAATGGTCTTTGCTTTTCATGCATTGGCCCACTTTGCATTTTCTCATTTTAGATACTACCCAACCTACAAATTCATTTCATGTACTATAATATTTCATTTTCTATAGTTTTTATTTTCTTTCTTTCTAAATGAATGTGATTTTCTCTTTGACTTCATTAGGGATTCGATCAGTTATGAGATAATTTTTCACATGGGTTGTAGTTGTACTATCTCACAAATGAACAACTCCTGAAATTGAACTTATGTCGTAGTTTTTTTGAAAAATAGTCATTTGACCGAATCTCTTAACACCATTTGTAACATTTATATGTTTTTGTGTGAAAATATTTATATATATTTGCGTCTTGTTAACCAGTGTCTTAAGAACATTTTTTAAAGTTTTAAATTAAAAAAATTATTTATTAAAAAGTCAAATATTTCAATTGTCAATACATTAAATACATAAATATCCATAGAAACTTATTATTCAAGGTACTTAAATCGTCCCTAGGACAACTTATTAGCACTTTCAATTTTGTTATTGGTTGTATCTTTTATAAAATGAATTTGTATTATGTGAGTTTTACTAGAACTAGATTAACCTCTAATGGTTTCTCCTCCTTCTGTGAATACAAATTCTGCTACAAAATTATAAATGTTTTCTCTGTTTATTTGTGAAGAAGATTTTGGTCACTTTTTACGAAAATGCAAATTCTGGTGTACGTTCACTTGATAAAAAAAGATTACACTCTACTTTGTCCTTTTCTTTTCTTAACTACTATTATCATGTGAAGGTGAGTCAAAAAGGAAATAGGTTTTTATTTATTTGTTAAATAGGGTACAAAGAAAATAAAAAATTTGTTCCATATCATCTCACACTCTATTATCATCTAACTACAAATTTTGATGTTTTGGGGTTTCACTTTCTCCAATTAAGACATCCAAATTGCACCATGAACTTGTCGATATGATCTACTTACATGTAATAAATTTTGATTTTAATGTACTTCCTTTAAACTCAAAGATAAACAAAAAAATTAAGCCATGTTTACGTAAAAAAAAAAAATTAAGTGTTTGACATATAAGTGCTTACGTATAAGTAGTTTTAATAATAAAATAAGTCAAGTTATTTATAAATAAGCTATGAGTTGTTTTGTAAATCATTCTTAAGAACTTATAAAAATAAGCTAAAAACAACTTATAGACATATCATCGGTTATTTATATAAGCTCTCAATCAGGCAAGAGTTTATGTAAATAGATAAACTCAAATAAACCAATTTAAACAGGTGAAAGTCCAATTTCAACCTATTTAATATTATTTTCTAAAAATACTCTTTAATGCATGAGAATAGTTTATACTTTACAACCATTTATTTTAATACTATTGTTTATAATTGACCTCTTCTTTGTTTGACATATTTGTAATTATTGTTTCTTATGATTGGTATGATCAGATTCACAGACTCAGCAACGTACCTCATCAGAGACAGCATCTGGAGTAGTTATAACTTCGGAAAGATCAAATACTCAAGGGAAGAACAACAACTAA

Protein sequence

>MS.gene066326.t1

MAYPHYRSQFGDTTFTKVFVGGLAWETPTDEMRTYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACADPNPVIDGRRANCNIASLGRPRPSPPRGRGTYQGGGVGTGAPGAAAAYGGVPAGGPPQMAGGATAAPVMYQPYGYPTYTPEYGYPQATMYNPQIQQAQYYQQLYGPSSSTMGSPYYYGYSMQAAAPRGTFSTPQPHRIQAGPSYLYYPTTPMEGASFTAAYRPLQQPLIRQPSPTPSPSDSQTQQRTSSETASGVVITSERSNTQGKNNN