Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066861.t1 | XP_013461517.1 | 91.2 | 498 | 31 | 2 | 1 | 485 | 1 | 498 | 2.00E-260 | 907.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066861.t1 | Q501D5 | 55.8 | 505 | 189 | 11 | 1 | 483 | 1 | 493 | 5.7e-147 | 522.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066861.t1 | A0A072V141 | 91.2 | 498 | 31 | 2 | 1 | 485 | 1 | 498 | 1.4e-260 | 907.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066861 | MS.gene57751 | PPI |
| MS.gene041425 | MS.gene066861 | PPI |
| MS.gene066861 | MS.gene58754 | PPI |
| MS.gene58234 | MS.gene066861 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066861.t1 | MTR_3g094070 | 91.165 | 498 | 31 | 2 | 1 | 485 | 1 | 498 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066861.t1 | AT2G40550 | 55.842 | 505 | 189 | 11 | 1 | 483 | 1 | 493 | 0.0 | 541 |
Find 0 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATTATGATACAAAT+AGG | - | 14517:17067-17086 | MS.gene066861:intron | 10.0% |
| !!! | AAATAAATTTACAAGTTTTA+TGG | - | 14517:17149-17168 | MS.gene066861:CDS | 10.0% |
| !!! | TTTGTATCATAATTATTTTT+TGG | + | 14517:17066-17085 | MS.gene066861:intergenic | 10.0% |
| !! | AATGATTTCATAAATAAAAC+TGG | + | 14517:15511-15530 | MS.gene066861:intergenic | 15.0% |
| !! | AGATACTAATATATTATTCT+AGG | + | 14517:15339-15358 | MS.gene066861:intergenic | 15.0% |
| !!! | TTAACTTGTTTTTAATTTCA+TGG | - | 14517:15969-15988 | MS.gene066861:CDS | 15.0% |
| !!! | TTTAGATTTGTTAGAAATTA+TGG | - | 14517:15363-15382 | MS.gene066861:CDS | 15.0% |
| !!! | TTTAGTATTCTATTTAGTTT+AGG | - | 14517:15540-15559 | MS.gene066861:intron | 15.0% |
| !! | AAATTGGATAACAAATATCT+TGG | + | 14517:15440-15459 | MS.gene066861:intergenic | 20.0% |
| !! | AATCAAATTCATTACACAAT+TGG | + | 14517:15300-15319 | MS.gene066861:intergenic | 20.0% |
| !! | AATGACATTTATTTATTCAC+AGG | - | 14517:15207-15226 | MS.gene066861:intron | 20.0% |
| !! | ACAAAAATCCGTAAATTTAT+TGG | + | 14517:14627-14646 | MS.gene066861:intergenic | 20.0% |
| !! | ATAAAACTGGTAAACTAAAT+AGG | + | 14517:15498-15517 | MS.gene066861:intergenic | 20.0% |
| !! | CTATGGACATAAAAAAAAAT+TGG | + | 14517:15456-15475 | MS.gene066861:intergenic | 20.0% |
| !! | GAAGATAGTGATTTATTAAA+TGG | - | 14517:16130-16149 | MS.gene066861:intron | 20.0% |
| !! | TAAAACTGGTAAACTAAATA+GGG | + | 14517:15497-15516 | MS.gene066861:intergenic | 20.0% |
| !! | TATTTATGCTTCATTTATGT+TGG | + | 14517:16293-16312 | MS.gene066861:intergenic | 20.0% |
| !! | TTGTTAATTAAGCAACAAAT+TGG | + | 14517:14547-14566 | MS.gene066861:intergenic | 20.0% |
| !!! | AATCTTCATTTATTTTCACT+TGG | - | 14517:17381-17400 | MS.gene066861:intron | 20.0% |
| !!! | AATGACATTTTTAAGTTTGT+GGG | - | 14517:16070-16089 | MS.gene066861:intron | 20.0% |
| !!! | AGTGATTTATTAAATGGATT+TGG | - | 14517:16136-16155 | MS.gene066861:intron | 20.0% |
| !!! | ATGTTTCTTTCCAATATTTT+AGG | - | 14517:14768-14787 | MS.gene066861:CDS | 20.0% |
| !!! | ATTTTTGTTCTTCTAAGAAT+TGG | - | 14517:15748-15767 | MS.gene066861:intron | 20.0% |
| !!! | TGTTTCTTTCCAATATTTTA+GGG | - | 14517:14769-14788 | MS.gene066861:CDS | 20.0% |
| ! | AACCTGATGAAGAATAATTA+GGG | + | 14517:14383-14402 | MS.gene066861:intergenic | 25.0% |
| ! | AATGTATAAATCACATGTGT+AGG | + | 14517:16806-16825 | MS.gene066861:intergenic | 25.0% |
| ! | ATGCACTTTCATTACTAAAT+TGG | - | 14517:14808-14827 | MS.gene066861:CDS | 25.0% |
| ! | ATTGAATAATAGTGTTTCCA+AGG | - | 14517:14874-14893 | MS.gene066861:CDS | 25.0% |
| ! | ATTTATTTATTCACAGGTTG+AGG | - | 14517:15213-15232 | MS.gene066861:intron | 25.0% |
| ! | CTTAGAAGAACAAAAATAGA+AGG | + | 14517:15745-15764 | MS.gene066861:intergenic | 25.0% |
| ! | GTTATGTGAATGTATATTGA+AGG | - | 14517:14583-14602 | MS.gene066861:CDS | 25.0% |
| ! | TACTAAAAGAATGGTATGAA+TGG | - | 14517:15261-15280 | MS.gene066861:intron | 25.0% |
| ! | TATAAACTGGAAAAATACCA+TGG | + | 14517:15631-15650 | MS.gene066861:intergenic | 25.0% |
| ! | TGATCAATAAGAATAGTAAC+AGG | - | 14517:16219-16238 | MS.gene066861:intron | 25.0% |
| ! | TTAAGTAGTCCCTAAAATAT+TGG | + | 14517:14781-14800 | MS.gene066861:intergenic | 25.0% |
| ! | TTCTCCTAATACTAAAAGAA+TGG | - | 14517:15252-15271 | MS.gene066861:intron | 25.0% |
| !! | AATTTTACCCTCTAAATTAC+AGG | - | 14517:16376-16395 | MS.gene066861:intron | 25.0% |
| !! | CATACCATTCTTTTAGTATT+AGG | + | 14517:15259-15278 | MS.gene066861:intergenic | 25.0% |
| !! | CTTGGAAATGAATTTTATGT+CGG | - | 14517:14481-14500 | MS.gene066861:CDS | 25.0% |
| !! | GCACATGATATTTTATCAAA+AGG | + | 14517:16567-16586 | MS.gene066861:intergenic | 25.0% |
| !! | TGATTTCAAGTACTATAAGA+TGG | - | 14517:17510-17529 | MS.gene066861:CDS | 25.0% |
| !! | TTTATTTATTCACAGGTTGA+GGG | - | 14517:15214-15233 | MS.gene066861:intron | 25.0% |
| !! | TTTTATTCACAGGAAACTTT+CGG | - | 14517:16415-16434 | MS.gene066861:intron | 25.0% |
| !!! | GAATGACATTTTTAAGTTTG+TGG | - | 14517:16069-16088 | MS.gene066861:intron | 25.0% |
| AACCCTAATTATTCTTCATC+AGG | - | 14517:14378-14397 | MS.gene066861:intron | 30.0% | |
| AAGCAATTAGCATCTTGAAT+TGG | - | 14517:16519-16538 | MS.gene066861:intron | 30.0% | |
| AATACAAACACTCTCAAGAA+TGG | + | 14517:16845-16864 | MS.gene066861:intergenic | 30.0% | |
| AATTATTCACATTTCTCTCG+AGG | + | 14517:15091-15110 | MS.gene066861:intergenic | 30.0% | |
| ACAAGGAATGAACTCAATTA+AGG | + | 14517:15059-15078 | MS.gene066861:intergenic | 30.0% | |
| ACAATGCTTGAAAAGATAGA+AGG | + | 14517:16741-16760 | MS.gene066861:intergenic | 30.0% | |
| AGCAATTAGCATCTTGAATT+GGG | - | 14517:16520-16539 | MS.gene066861:intron | 30.0% | |
| ATATATCTAGCATGGTACAA+CGG | + | 14517:16023-16042 | MS.gene066861:intergenic | 30.0% | |
| ATTCATTACACAATTGGAGT+TGG | + | 14517:15294-15313 | MS.gene066861:intergenic | 30.0% | |
| ATTGATCAAGTATCCTTCAA+TGG | + | 14517:16207-16226 | MS.gene066861:intergenic | 30.0% | |
| CAAGGAATGAACTCAATTAA+GGG | + | 14517:15058-15077 | MS.gene066861:intergenic | 30.0% | |
| CAAGTACTATAAGATGGAAA+TGG | - | 14517:17516-17535 | MS.gene066861:CDS | 30.0% | |
| CAATGCTTGAAAAGATAGAA+GGG | + | 14517:16740-16759 | MS.gene066861:intergenic | 30.0% | |
| CTATGATAGGCTTATTCTAA+AGG | + | 14517:16451-16470 | MS.gene066861:intergenic | 30.0% | |
| CTCATCTAGTTGTATTGTAA+AGG | - | 14517:15889-15908 | MS.gene066861:CDS | 30.0% | |
| CTTATAAGAACATCATACCT+TGG | + | 14517:16711-16730 | MS.gene066861:intergenic | 30.0% | |
| GAACCTGATGAAGAATAATT+AGG | + | 14517:14384-14403 | MS.gene066861:intergenic | 30.0% | |
| GATGAGACACAATTAAAAGA+TGG | - | 14517:17233-17252 | MS.gene066861:intron | 30.0% | |
| GATTTATTCATCTGAGCAAA+TGG | - | 14517:16488-16507 | MS.gene066861:intron | 30.0% | |
| GCTTCAATAAGAATAGTAAC+AGG | - | 14517:16241-16260 | MS.gene066861:intron | 30.0% | |
| GGATAACAAATATCTTGGTT+TGG | + | 14517:15435-15454 | MS.gene066861:intergenic | 30.0% | |
| GTGTAATGAATTTGATTGAC+TGG | - | 14517:15303-15322 | MS.gene066861:intron | 30.0% | |
| TGAAACCAAATACTCTTGTT+CGG | - | 14517:14434-14453 | MS.gene066861:intron | 30.0% | |
| TGCAAGCAATCAATAGAAAA+TGG | + | 14517:17439-17458 | MS.gene066861:intergenic | 30.0% | |
| TGTAATCCAAAAGAATGACT+CGG | + | 14517:15124-15143 | MS.gene066861:intergenic | 30.0% | |
| TGTGAATGTATATTGAAGGA+TGG | - | 14517:14587-14606 | MS.gene066861:CDS | 30.0% | |
| TTAGAATAAGCCTATCATAG+AGG | - | 14517:16451-16470 | MS.gene066861:intron | 30.0% | |
| TTCATTACACAATTGGAGTT+GGG | + | 14517:15293-15312 | MS.gene066861:intergenic | 30.0% | |
| ! | CGCACATTTAACTTATAAAC+TGG | + | 14517:15644-15663 | MS.gene066861:intergenic | 30.0% |
| ! | CTCGAATATTTTCTTGCATT+GGG | - | 14517:14743-14762 | MS.gene066861:CDS | 30.0% |
| ! | TCAAGCATTGTAAATGATCT+TGG | - | 14517:16750-16769 | MS.gene066861:intron | 30.0% |
| ! | TCTATTTAGTTTAGGAGTTC+TGG | - | 14517:15548-15567 | MS.gene066861:intron | 30.0% |
| ! | TCTCGAATATTTTCTTGCAT+TGG | - | 14517:14742-14761 | MS.gene066861:CDS | 30.0% |
| !! | AACAAATATCTTGGTTTGGA+TGG | + | 14517:15431-15450 | MS.gene066861:intergenic | 30.0% |
| !! | AGGTAAGATTAGTCTTATCA+TGG | - | 14517:15909-15928 | MS.gene066861:CDS | 30.0% |
| !! | ATGCATGTGTATTGTTTCTA+TGG | - | 14517:16312-16331 | MS.gene066861:intron | 30.0% |
| !! | GATTAGTCTTATCATGGTTT+AGG | - | 14517:15915-15934 | MS.gene066861:CDS | 30.0% |
| !! | TCTTGAGAGTGTTTGTATTA+AGG | - | 14517:16846-16865 | MS.gene066861:CDS | 30.0% |
| AAACACTTGGTATGTGTTTC+AGG | - | 14517:17480-17499 | MS.gene066861:CDS | 35.0% | |
| AAGAACATCATACCTTGGAT+AGG | + | 14517:16706-16725 | MS.gene066861:intergenic | 35.0% | |
| AAGGGAACAGAAGAAATTAC+AGG | + | 14517:15040-15059 | MS.gene066861:intergenic | 35.0% | |
| AAGGTTGCTGAAGAATGTAA+TGG | - | 14517:17286-17305 | MS.gene066861:CDS | 35.0% | |
| AGGTATATATCGTCCATTGA+AGG | - | 14517:16191-16210 | MS.gene066861:intron | 35.0% | |
| AGTTGTTAATGCATAGGTTC+CGG | - | 14517:14901-14920 | MS.gene066861:intron | 35.0% | |
| ATAGGTACAATTACATCAGC+TGG | + | 14517:17592-17611 | MS.gene066861:intergenic | 35.0% | |
| CAAAGATAACGACAAACACT+TGG | - | 14517:17467-17486 | MS.gene066861:CDS | 35.0% | |
| GATGTCTTAAAAGAGACTCT+CGG | + | 14517:16628-16647 | MS.gene066861:intergenic | 35.0% | |
| GGTAACAGTTGTTAATGCAT+AGG | - | 14517:14895-14914 | MS.gene066861:intron | 35.0% | |
| GTACTGAATAACTGACTGAT+AGG | - | 14517:15604-15623 | MS.gene066861:intron | 35.0% | |
| GTATAAATCACATGTGTAGG+AGG | + | 14517:16803-16822 | MS.gene066861:intergenic | 35.0% | |
| GTGATTTGAAGAGAAGAGAA+TGG | + | 14517:14353-14372 | MS.gene066861:intergenic | 35.0% | |
| GTGGAGGACCAATAAATTTA+CGG | - | 14517:14616-14635 | MS.gene066861:intron | 35.0% | |
| GTTCAAGTATTCCACTGTAA+GGG | + | 14517:17028-17047 | MS.gene066861:intergenic | 35.0% | |
| TAAGTGTGTACCTCTATGAT+AGG | + | 14517:16464-16483 | MS.gene066861:intergenic | 35.0% | |
| TACAACGGAAAATGAGGAAA+TGG | + | 14517:16008-16027 | MS.gene066861:intergenic | 35.0% | |
| TATTACTACCTCCATGTGTT+GGG | - | 14517:15683-15702 | MS.gene066861:CDS | 35.0% | |
| TCAGATGTCCAATCAATAGA+TGG | + | 14517:14971-14990 | MS.gene066861:intergenic | 35.0% | |
| TCTAGTATGAGTTTAATGCC+TGG | - | 14517:15854-15873 | MS.gene066861:intron | 35.0% | |
| TGAATAAAACAACGAAGTCG+TGG | + | 14517:16404-16423 | MS.gene066861:intergenic | 35.0% | |
| TGCATTAACAACTGTTACCT+TGG | + | 14517:14894-14913 | MS.gene066861:intergenic | 35.0% | |
| TGTTCAAGTATTCCACTGTA+AGG | + | 14517:17029-17048 | MS.gene066861:intergenic | 35.0% | |
| TTATTACTACCTCCATGTGT+TGG | - | 14517:15682-15701 | MS.gene066861:CDS | 35.0% | |
| TTCAAGTATTCCACTGTAAG+GGG | + | 14517:17027-17046 | MS.gene066861:intergenic | 35.0% | |
| TTGGCAATCCATCTATTGAT+TGG | - | 14517:14960-14979 | MS.gene066861:intron | 35.0% | |
| ! | CATAGAGGTACACACTTAAA+TGG | - | 14517:16466-16485 | MS.gene066861:intron | 35.0% |
| ! | CTCTTTCTTTTACAGAGAGA+AGG | - | 14517:15776-15795 | MS.gene066861:intron | 35.0% |
| !! | GACTTCGTTGTTTTATTCAC+AGG | - | 14517:16405-16424 | MS.gene066861:intron | 35.0% |
| !!! | AACTGTTAGTTTTGTCTGAG+GGG | - | 14517:17551-17570 | MS.gene066861:CDS | 35.0% |
| !!! | CAACTGTTAGTTTTGTCTGA+GGG | - | 14517:17550-17569 | MS.gene066861:CDS | 35.0% |
| AATACTCTTGTTCGGTTTCG+TGG | - | 14517:14442-14461 | MS.gene066861:intron | 40.0% | |
| AATCACATGTGTAGGAGGAA+AGG | + | 14517:16798-16817 | MS.gene066861:intergenic | 40.0% | |
| ACGATATATACCTTGTCAGC+TGG | + | 14517:16184-16203 | MS.gene066861:intergenic | 40.0% | |
| AGACATCTCTCAGTTGTTCT+AGG | - | 14517:16641-16660 | MS.gene066861:intron | 40.0% | |
| AGATGGAACTCTCAATTCTG+TGG | - | 14517:17250-17269 | MS.gene066861:intron | 40.0% | |
| AGCAAAGAAACTGCGTCTAT+TGG | - | 14517:16949-16968 | MS.gene066861:intron | 40.0% | |
| ATAACTGACTGATAGGTCCA+TGG | - | 14517:15611-15630 | MS.gene066861:CDS | 40.0% | |
| ATCACATGTGTAGGAGGAAA+GGG | + | 14517:16797-16816 | MS.gene066861:intergenic | 40.0% | |
| ATTGATCGGAGAGAAAGTGA+CGG | + | 14517:14303-14322 | MS.gene066861:intergenic | 40.0% | |
| CAAACACTCTCAAGAATGGA+AGG | + | 14517:16841-16860 | MS.gene066861:intergenic | 40.0% | |
| CATCTGAGCAAAGAGAAAAG+AGG | - | 14517:14984-15003 | MS.gene066861:intron | 40.0% | |
| CCTCAGACAAAACTAACAGT+TGG | + | 14517:17552-17571 | MS.gene066861:intergenic | 40.0% | |
| CGATATATACCTTGTCAGCT+GGG | + | 14517:16183-16202 | MS.gene066861:intergenic | 40.0% | |
| CGTGGTACCTGTAATTTAGA+GGG | + | 14517:16386-16405 | MS.gene066861:intergenic | 40.0% | |
| GAGATGCAGCAACATGAAAT+GGG | + | 14517:16684-16703 | MS.gene066861:intergenic | 40.0% | |
| GAGATTGCTTTACTGTGTTC+TGG | - | 14517:14697-14716 | MS.gene066861:intron | 40.0% | |
| GATGGAACTCTCAATTCTGT+GGG | - | 14517:17251-17270 | MS.gene066861:intron | 40.0% | |
| GGAATGATTCAGGATATGCT+TGG | - | 14517:14463-14482 | MS.gene066861:intron | 40.0% | |
| GGTGTGTCATATATCTAGCA+TGG | + | 14517:16031-16050 | MS.gene066861:intergenic | 40.0% | |
| GTTGTTAATGCATAGGTTCC+GGG | - | 14517:14902-14921 | MS.gene066861:intron | 40.0% | |
| TAAAGAAGTGGGATCGAAAC+CGG | + | 14517:14248-14267 | MS.gene066861:intergenic | 40.0% | |
| TATTCGAGAGCGAAGAGAAA+TGG | + | 14517:14731-14750 | MS.gene066861:intergenic | 40.0% | |
| TCGCGGTTGTTTAAAGAAGT+GGG | + | 14517:14259-14278 | MS.gene066861:intergenic | 40.0% | |
| TCGTGGTACCTGTAATTTAG+AGG | + | 14517:16387-16406 | MS.gene066861:intergenic | 40.0% | |
| TGGTTTCACGTATCTGATAG+TGG | + | 14517:14422-14441 | MS.gene066861:intergenic | 40.0% | |
| TGTCAACATTCCATTCCCAT+TGG | - | 14517:14644-14663 | MS.gene066861:intron | 40.0% | |
| TTATGGTCAATGCTCCAGAT+TGG | - | 14517:17166-17185 | MS.gene066861:CDS | 40.0% | |
| TTCTTTAAACAACCGCGACT+GGG | - | 14517:14261-14280 | MS.gene066861:CDS | 40.0% | |
| ! | AGCTCTACTGTCTTTTTGGA+TGG | - | 14517:17338-17357 | MS.gene066861:CDS | 40.0% |
| ! | ATTTTATGTCGGCGCTGTTA+AGG | - | 14517:14492-14511 | MS.gene066861:CDS | 40.0% |
| ! | GAATGTAATGGAGTCGCAAA+AGG | - | 14517:17298-17317 | MS.gene066861:CDS | 40.0% |
| ! | GTCAAGCTCTACTGTCTTTT+TGG | - | 14517:17334-17353 | MS.gene066861:CDS | 40.0% |
| ! | TATGGCTGATATTTTGCTCG+AGG | - | 14517:15381-15400 | MS.gene066861:intron | 40.0% |
| ! | TATTGAAGGATGGTTCTGTG+TGG | - | 14517:14597-14616 | MS.gene066861:intron | 40.0% |
| ! | TCTAGGCAATGATGATGTAG+CGG | - | 14517:16658-16677 | MS.gene066861:intron | 40.0% |
| !! | AATAGGGTACTGAAGACTTG+AGG | + | 14517:15481-15500 | MS.gene066861:intergenic | 40.0% |
| !! | ATAGGGTACTGAAGACTTGA+GGG | + | 14517:15480-15499 | MS.gene066861:intergenic | 40.0% |
| !! | CCAAAAGAATGACTCGGTAA+GGG | + | 14517:15118-15137 | MS.gene066861:intergenic | 40.0% |
| !! | CGAAACCGAACAAGAGTATT+TGG | + | 14517:14442-14461 | MS.gene066861:intergenic | 40.0% |
| !! | TCCAAAAGAATGACTCGGTA+AGG | + | 14517:15119-15138 | MS.gene066861:intergenic | 40.0% |
| !! | TTGGTTTGGATGGACTTGAT+TGG | + | 14517:15421-15440 | MS.gene066861:intergenic | 40.0% |
| !!! | CCAACTGTTAGTTTTGTCTG+AGG | - | 14517:17549-17568 | MS.gene066861:CDS | 40.0% |
| !!! | GGATTGATTTGCTTTTGACC+AGG | - | 14517:16867-16886 | MS.gene066861:intron | 40.0% |
| !!! | TTGATTTGCTTTTGACCAGG+TGG | - | 14517:16870-16889 | MS.gene066861:intron | 40.0% |
| ACATTGCATACCCCTTACAG+TGG | - | 14517:17014-17033 | MS.gene066861:intron | 45.0% | |
| ACTGAAGACTTGAGGGTCTA+TGG | + | 14517:15473-15492 | MS.gene066861:intergenic | 45.0% | |
| AGCAATCTCCGTTCCCAAAT+AGG | + | 14517:14686-14705 | MS.gene066861:intergenic | 45.0% | |
| CAAGACACCAGTTTCCAATC+TGG | + | 14517:17183-17202 | MS.gene066861:intergenic | 45.0% | |
| CAATGCTCCAGATTGGAAAC+TGG | - | 14517:17173-17192 | MS.gene066861:CDS | 45.0% | |
| CACTTGGTATGTGTTTCAGG+TGG | - | 14517:17483-17502 | MS.gene066861:CDS | 45.0% | |
| CATGGAGTTGTACCTGAGAT+CGG | - | 14517:15827-15846 | MS.gene066861:intron | 45.0% | |
| CTCTGCTGATACGCCTATTT+GGG | - | 14517:14670-14689 | MS.gene066861:intron | 45.0% | |
| CTGAGAGAGATGCGATTGAT+CGG | + | 14517:14317-14336 | MS.gene066861:intergenic | 45.0% | |
| CTGATACGCCTATTTGGGAA+CGG | - | 14517:14675-14694 | MS.gene066861:intron | 45.0% | |
| CTTACAGCCAAAACCTGACT+TGG | - | 14517:16592-16611 | MS.gene066861:intron | 45.0% | |
| CTTCTTTAAACAACCGCGAC+TGG | - | 14517:14260-14279 | MS.gene066861:CDS | 45.0% | |
| GAACCTTCAACAGAAGCAGT+TGG | - | 14517:14941-14960 | MS.gene066861:intron | 45.0% | |
| GAGCAAAGAGAAAAGAGGAG+AGG | - | 14517:14989-15008 | MS.gene066861:intron | 45.0% | |
| GCATGGTACAACGGAAAATG+AGG | + | 14517:16014-16033 | MS.gene066861:intergenic | 45.0% | |
| GGAGATGCAGCAACATGAAA+TGG | + | 14517:16685-16704 | MS.gene066861:intergenic | 45.0% | |
| GTATCAGCAGAGCAACCAAT+GGG | + | 14517:14662-14681 | MS.gene066861:intergenic | 45.0% | |
| GTCGCGGTTGTTTAAAGAAG+TGG | + | 14517:14260-14279 | MS.gene066861:intergenic | 45.0% | |
| TACAACTCCATGAGACTGAG+AGG | + | 14517:15819-15838 | MS.gene066861:intergenic | 45.0% | |
| TACATCTGATCCAGAGCTTC+AGG | - | 14517:16099-16118 | MS.gene066861:intron | 45.0% | |
| TCACAGGAAACTTTCGGTTC+TGG | - | 14517:16421-16440 | MS.gene066861:intron | 45.0% | |
| TCAGCTGGGAAATGATGCAA+GGG | + | 14517:16169-16188 | MS.gene066861:intergenic | 45.0% | |
| TCGGTTTCGTGGAATGATTC+AGG | - | 14517:14453-14472 | MS.gene066861:intron | 45.0% | |
| TCTCGAGGCACAAAGAAACA+AGG | + | 14517:15076-15095 | MS.gene066861:intergenic | 45.0% | |
| TCTTTAAACAACCGCGACTG+GGG | - | 14517:14262-14281 | MS.gene066861:CDS | 45.0% | |
| TTCAGCTTCAGTTCAGACTC+TGG | + | 14517:16052-16071 | MS.gene066861:intergenic | 45.0% | |
| TTGCCAACTGCTTCTGTTGA+AGG | + | 14517:14947-14966 | MS.gene066861:intergenic | 45.0% | |
| ! | AGGGGTATGCAATGTGTGAA+AGG | + | 14517:17009-17028 | MS.gene066861:intergenic | 45.0% |
| ! | CCCTTACCGAGTCATTCTTT+TGG | - | 14517:15115-15134 | MS.gene066861:CDS | 45.0% |
| ! | CCTTTGACCAAGTCAGGTTT+TGG | + | 14517:16602-16621 | MS.gene066861:intergenic | 45.0% |
| ! | GATGAGTTGCTATTGAGACC+AGG | + | 14517:15875-15894 | MS.gene066861:intergenic | 45.0% |
| !! | CCAAAACCTGACTTGGTCAA+AGG | - | 14517:16599-16618 | MS.gene066861:intron | 45.0% |
| !! | GAAGCTCTGGATCAGATGTA+AGG | + | 14517:16099-16118 | MS.gene066861:intergenic | 45.0% |
| !! | GTTTTGACGATCCCAACACA+TGG | + | 14517:15697-15716 | MS.gene066861:intergenic | 45.0% |
| !! | TCACGTATCTGATAGTGGCT+GGG | + | 14517:14417-14436 | MS.gene066861:intergenic | 45.0% |
| !! | TTCACGTATCTGATAGTGGC+TGG | + | 14517:14418-14437 | MS.gene066861:intergenic | 45.0% |
| !!! | TAACAAAAAAAAATTAATTT+TGG | - | 14517:14561-14580 | MS.gene066861:CDS | 5.0% |
| AAGGTTCTGCCCACGAATTC+AGG | + | 14517:14928-14947 | MS.gene066861:intergenic | 50.0% | |
| ACTCTCAAGAATGGAAGGCG+AGG | + | 14517:16836-16855 | MS.gene066861:intergenic | 50.0% | |
| AGCAGAGCAACCAATGGGAA+TGG | + | 14517:14657-14676 | MS.gene066861:intergenic | 50.0% | |
| ATACTAGAGCCACCGATCTC+AGG | + | 14517:15842-15861 | MS.gene066861:intergenic | 50.0% | |
| ATCTGATCCAGAGCTTCAGG+AGG | - | 14517:16102-16121 | MS.gene066861:intron | 50.0% | |
| CGATCAATCGCATCTCTCTC+AGG | - | 14517:14315-14334 | MS.gene066861:intron | 50.0% | |
| CGTATCAGCAGAGCAACCAA+TGG | + | 14517:14663-14682 | MS.gene066861:intergenic | 50.0% | |
| CTCTCAAGAATGGAAGGCGA+GGG | + | 14517:16835-16854 | MS.gene066861:intergenic | 50.0% | |
| CTGTGGGTGTAGAGAATGCA+AGG | - | 14517:17267-17286 | MS.gene066861:intron | 50.0% | |
| GCATCATTTCCCAGCTGACA+AGG | - | 14517:16171-16190 | MS.gene066861:intron | 50.0% | |
| GCTCTGCTGATACGCCTATT+TGG | - | 14517:14669-14688 | MS.gene066861:intron | 50.0% | |
| GGTGTCTTGCAACTAGCTGA+AGG | - | 14517:17194-17213 | MS.gene066861:intron | 50.0% | |
| GTCAGCTGGGAAATGATGCA+AGG | + | 14517:16170-16189 | MS.gene066861:intergenic | 50.0% | |
| GTTGAGGGTGATGAGGTTGA+GGG | - | 14517:15229-15248 | MS.gene066861:intron | 50.0% | |
| GTTGCTGCATCTCCTATCCA+AGG | - | 14517:16691-16710 | MS.gene066861:intron | 50.0% | |
| TCATTGTCCTCCTGAAGCTC+TGG | + | 14517:16112-16131 | MS.gene066861:intergenic | 50.0% | |
| TCTCAAGAATGGAAGGCGAG+GGG | + | 14517:16834-16853 | MS.gene066861:intergenic | 50.0% | |
| TGGCAAGGAGATCGTACTGT+GGG | + | 14517:14180-14199 | MS.gene066861:intergenic | 50.0% | |
| TTCTATGGACTCGCAGCATC+TGG | - | 14517:16327-16346 | MS.gene066861:intron | 50.0% | |
| TTGACGATCCCAACACATGG+AGG | + | 14517:15694-15713 | MS.gene066861:intergenic | 50.0% | |
| TTGGCAAGGAGATCGTACTG+TGG | + | 14517:14181-14200 | MS.gene066861:intergenic | 50.0% | |
| ! | AGGGTAGATGCTCTTGCTGT+GGG | - | 14517:16898-16917 | MS.gene066861:intron | 50.0% |
| ! | TGAAGGATGGTTCTGTGTGG+AGG | - | 14517:14600-14619 | MS.gene066861:intron | 50.0% |
| ! | TGCAATGTGTGAAAGGCACG+AGG | + | 14517:17002-17021 | MS.gene066861:intergenic | 50.0% |
| ! | TTCACAGGTTGAGGGTGATG+AGG | - | 14517:15222-15241 | MS.gene066861:intron | 50.0% |
| ! | TTTTGACCAGGTGGAAGCCA+GGG | - | 14517:16879-16898 | MS.gene066861:intron | 50.0% |
| !! | CACGTATCTGATAGTGGCTG+GGG | + | 14517:14416-14435 | MS.gene066861:intergenic | 50.0% |
| ACTCCATGAGACTGAGAGGC+AGG | + | 14517:15815-15834 | MS.gene066861:intergenic | 55.0% | |
| AGAAGTGGGATCGAAACCGG+AGG | + | 14517:14245-14264 | MS.gene066861:intergenic | 55.0% | |
| ATAGTGGCTGGGGTGAGAAG+CGG | + | 14517:14406-14425 | MS.gene066861:intergenic | 55.0% | |
| CAGGGTAGATGCTCTTGCTG+TGG | - | 14517:16897-16916 | MS.gene066861:intron | 55.0% | |
| CGGATGCCTTTGACCAAGTC+AGG | + | 14517:16608-16627 | MS.gene066861:intergenic | 55.0% | |
| CTCCATGAGACTGAGAGGCA+GGG | + | 14517:15814-15833 | MS.gene066861:intergenic | 55.0% | |
| GATCTCCTTGCCAACCCACT+CGG | - | 14517:14187-14206 | MS.gene066861:CDS | 55.0% | |
| GGAGTTGTACCTGAGATCGG+TGG | - | 14517:15830-15849 | MS.gene066861:intron | 55.0% | |
| GGTTGAGGGTGATGAGGTTG+AGG | - | 14517:15228-15247 | MS.gene066861:intron | 55.0% | |
| TCCATGAGACTGAGAGGCAG+GGG | + | 14517:15813-15832 | MS.gene066861:intergenic | 55.0% | |
| ! | CTTTTGACCAGGTGGAAGCC+AGG | - | 14517:16878-16897 | MS.gene066861:intron | 55.0% |
| !! | CACAGCAAGAGCATCTACCC+TGG | + | 14517:16899-16918 | MS.gene066861:intergenic | 55.0% |
| AGGTTCCGGGCCTGAATTCG+TGG | - | 14517:14915-14934 | MS.gene066861:intron | 60.0% | |
| CATCTACCCTGGCTTCCACC+TGG | + | 14517:16888-16907 | MS.gene066861:intergenic | 60.0% | |
| GGGATCGAAACCGGAGGCTA+TGG | + | 14517:14239-14258 | MS.gene066861:intergenic | 60.0% | |
| GGTTCCGGGCCTGAATTCGT+GGG | - | 14517:14916-14935 | MS.gene066861:intron | 60.0% | |
| TCCCCTGCCTCTCAGTCTCA+TGG | - | 14517:15809-15828 | MS.gene066861:intron | 60.0% | |
| TCGTACTGTGGGCCCACCAT+TGG | + | 14517:14169-14188 | MS.gene066861:intergenic | 60.0% | |
| TCTGCCCACGAATTCAGGCC+CGG | + | 14517:14923-14942 | MS.gene066861:intergenic | 60.0% | |
| TGGATCTGACCGCACCGAGT+GGG | + | 14517:14204-14223 | MS.gene066861:intergenic | 60.0% | |
| TTCGACGTCGCCATAGCCTC+CGG | - | 14517:14226-14245 | MS.gene066861:CDS | 60.0% | |
| GATCGATGACGCCCCAGTCG+CGG | + | 14517:14276-14295 | MS.gene066861:intergenic | 65.0% | |
| GGAGGCTATGGCGACGTCGA+AGG | + | 14517:14227-14246 | MS.gene066861:intergenic | 65.0% | |
| GGCTATGGCGACGTCGAAGG+TGG | + | 14517:14224-14243 | MS.gene066861:intergenic | 65.0% | |
| GTGGATCTGACCGCACCGAG+TGG | + | 14517:14205-14224 | MS.gene066861:intergenic | 65.0% | |
| TCTGACCGCACCGAGTGGGT+TGG | + | 14517:14200-14219 | MS.gene066861:intergenic | 65.0% | |
| ! | CCTTGCCAACCCACTCGGTG+CGG | - | 14517:14192-14211 | MS.gene066861:CDS | 65.0% |
| !! | CCGCACCGAGTGGGTTGGCA+AGG | + | 14517:14195-14214 | MS.gene066861:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 14517 | gene | 14169 | 17628 | 14169 | ID=MS.gene066861 |
| 14517 | mRNA | 14169 | 17628 | 14169 | ID=MS.gene066861.t1;Parent=MS.gene066861 |
| 14517 | exon | 17461 | 17628 | 17461 | ID=MS.gene066861.t1.exon1;Parent=MS.gene066861.t1 |
| 14517 | CDS | 17461 | 17628 | 17461 | ID=cds.MS.gene066861.t1;Parent=MS.gene066861.t1 |
| 14517 | exon | 17284 | 17397 | 17284 | ID=MS.gene066861.t1.exon2;Parent=MS.gene066861.t1 |
| 14517 | CDS | 17284 | 17397 | 17284 | ID=cds.MS.gene066861.t1;Parent=MS.gene066861.t1 |
| 14517 | exon | 17079 | 17192 | 17079 | ID=MS.gene066861.t1.exon3;Parent=MS.gene066861.t1 |
| 14517 | CDS | 17079 | 17192 | 17079 | ID=cds.MS.gene066861.t1;Parent=MS.gene066861.t1 |
| 14517 | exon | 16758 | 16880 | 16758 | ID=MS.gene066861.t1.exon4;Parent=MS.gene066861.t1 |
| 14517 | CDS | 16758 | 16880 | 16758 | ID=cds.MS.gene066861.t1;Parent=MS.gene066861.t1 |
| 14517 | exon | 16524 | 16568 | 16524 | ID=MS.gene066861.t1.exon5;Parent=MS.gene066861.t1 |
| 14517 | CDS | 16524 | 16568 | 16524 | ID=cds.MS.gene066861.t1;Parent=MS.gene066861.t1 |
| 14517 | exon | 15887 | 16006 | 15887 | ID=MS.gene066861.t1.exon6;Parent=MS.gene066861.t1 |
| 14517 | CDS | 15887 | 16006 | 15887 | ID=cds.MS.gene066861.t1;Parent=MS.gene066861.t1 |
| 14517 | exon | 15605 | 15760 | 15605 | ID=MS.gene066861.t1.exon7;Parent=MS.gene066861.t1 |
| 14517 | CDS | 15605 | 15760 | 15605 | ID=cds.MS.gene066861.t1;Parent=MS.gene066861.t1 |
| 14517 | exon | 15361 | 15399 | 15361 | ID=MS.gene066861.t1.exon8;Parent=MS.gene066861.t1 |
| 14517 | CDS | 15361 | 15399 | 15361 | ID=cds.MS.gene066861.t1;Parent=MS.gene066861.t1 |
| 14517 | exon | 15085 | 15198 | 15085 | ID=MS.gene066861.t1.exon9;Parent=MS.gene066861.t1 |
| 14517 | CDS | 15085 | 15198 | 15085 | ID=cds.MS.gene066861.t1;Parent=MS.gene066861.t1 |
| 14517 | exon | 14709 | 14908 | 14709 | ID=MS.gene066861.t1.exon10;Parent=MS.gene066861.t1 |
| 14517 | CDS | 14709 | 14908 | 14709 | ID=cds.MS.gene066861.t1;Parent=MS.gene066861.t1 |
| 14517 | exon | 14478 | 14613 | 14478 | ID=MS.gene066861.t1.exon11;Parent=MS.gene066861.t1 |
| 14517 | CDS | 14478 | 14613 | 14478 | ID=cds.MS.gene066861.t1;Parent=MS.gene066861.t1 |
| 14517 | exon | 14169 | 14295 | 14169 | ID=MS.gene066861.t1.exon12;Parent=MS.gene066861.t1 |
| 14517 | CDS | 14169 | 14295 | 14169 | ID=cds.MS.gene066861.t1;Parent=MS.gene066861.t1 |
| Gene Sequence |
| Protein sequence |
